##gff-version 3
HG002_chrY	CAT	gene	77392	78740	.	+	.	source_gene_common_name=ENSG00000292329;source_gene=ENSG00000292329.1;alternative_source_transcripts=ENST00000711121.1,ENST00000711121.1;gene_id=HG002_chrY_G0000001;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000292329;gene_sources=liftoff;ID=HG002_chrY_G0000001;Name=ENSG00000292329
HG002_chrY	CAT	transcript	77392	78740	1000	+	.	source_transcript=ENST00000711121.1;source_transcript_name=ENST00000711121;source_gene=ENSG00000292329.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292329.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711121.1;transcript_score=299.61400000000003;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292329;alternative_source_transcripts=ENST00000711121.1,ENST00000711121.1;transcript_id=HG002_chrY_T0000001;gene_id=HG002_chrY_G0000001;Parent=HG002_chrY_G0000001;transcript_name=HG002_chrY_T0000001;gene_name=ENSG00000292329;ID=HG002_chrY_T0000001;Name=ENSG00000292329
HG002_chrY	CAT	exon	77392	77495	.	+	.	source_transcript=ENST00000711121.1;source_transcript_name=ENST00000711121;source_gene=ENSG00000292329.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292329.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711121.1;transcript_score=299.61400000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292329;alternative_source_transcripts=ENST00000711121.1,ENST00000711121.1;transcript_id=HG002_chrY_T0000001;gene_id=HG002_chrY_G0000001;Parent=HG002_chrY_T0000001;transcript_name=HG002_chrY_T0000001;gene_name=ENSG00000292329;ID=exon:HG002_chrY_T0000001:0;Name=ENSG00000292329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	77496	78585	.	+	.	source_transcript=ENST00000711121.1;source_transcript_name=ENST00000711121;source_gene=ENSG00000292329.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292329.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711121.1;transcript_score=299.61400000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292329;alternative_source_transcripts=ENST00000711121.1,ENST00000711121.1;transcript_id=HG002_chrY_T0000001;gene_id=HG002_chrY_G0000001;Parent=HG002_chrY_T0000001;transcript_name=HG002_chrY_T0000001;gene_name=ENSG00000292329;ID=intron:HG002_chrY_T0000001:0;Name=ENSG00000292329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	78586	78740	.	+	.	source_transcript=ENST00000711121.1;source_transcript_name=ENST00000711121;source_gene=ENSG00000292329.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292329.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711121.1;transcript_score=299.61400000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292329;alternative_source_transcripts=ENST00000711121.1,ENST00000711121.1;transcript_id=HG002_chrY_T0000001;gene_id=HG002_chrY_G0000001;Parent=HG002_chrY_T0000001;transcript_name=HG002_chrY_T0000001;gene_name=ENSG00000292329;ID=exon:HG002_chrY_T0000001:1;Name=ENSG00000292329;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	91637	104058	.	-	.	source_gene_common_name=ENSG00000310553;source_gene=ENSG00000310553.1;alternative_source_transcripts=ENST00000850732.1,ENST00000850732.1;gene_id=HG002_chrY_G0000002;gene_biotype=lncRNA;gene_name=ENSG00000310553;gene_sources=liftoff;ID=HG002_chrY_G0000002;Name=ENSG00000310553
HG002_chrY	CAT	transcript	91637	104058	1000	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850732.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;alternative_source_transcripts=ENST00000850732.1,ENST00000850732.1;transcript_id=HG002_chrY_T0000002;gene_id=HG002_chrY_G0000002;Parent=HG002_chrY_G0000002;transcript_name=HG002_chrY_T0000002;gene_name=ENSG00000310553;ID=HG002_chrY_T0000002;Name=ENSG00000310553
HG002_chrY	CAT	exon	91637	91828	.	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850732.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;alternative_source_transcripts=ENST00000850732.1,ENST00000850732.1;transcript_id=HG002_chrY_T0000002;gene_id=HG002_chrY_G0000002;Parent=HG002_chrY_T0000002;transcript_name=HG002_chrY_T0000002;gene_name=ENSG00000310553;ID=exon:HG002_chrY_T0000002:0;Name=ENSG00000310553;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	91829	103530	.	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850732.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;alternative_source_transcripts=ENST00000850732.1,ENST00000850732.1;transcript_id=HG002_chrY_T0000002;gene_id=HG002_chrY_G0000002;Parent=HG002_chrY_T0000002;transcript_name=HG002_chrY_T0000002;gene_name=ENSG00000310553;ID=intron:HG002_chrY_T0000002:0;Name=ENSG00000310553;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	103531	103669	.	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850732.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;alternative_source_transcripts=ENST00000850732.1,ENST00000850732.1;transcript_id=HG002_chrY_T0000002;gene_id=HG002_chrY_G0000002;Parent=HG002_chrY_T0000002;transcript_name=HG002_chrY_T0000002;gene_name=ENSG00000310553;ID=exon:HG002_chrY_T0000002:1;Name=ENSG00000310553;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	103670	103909	.	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850732.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;alternative_source_transcripts=ENST00000850732.1,ENST00000850732.1;transcript_id=HG002_chrY_T0000002;gene_id=HG002_chrY_G0000002;Parent=HG002_chrY_T0000002;transcript_name=HG002_chrY_T0000002;gene_name=ENSG00000310553;ID=intron:HG002_chrY_T0000002:1;Name=ENSG00000310553;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	103910	104058	.	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850732.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;alternative_source_transcripts=ENST00000850732.1,ENST00000850732.1;transcript_id=HG002_chrY_T0000002;gene_id=HG002_chrY_G0000002;Parent=HG002_chrY_T0000002;transcript_name=HG002_chrY_T0000002;gene_name=ENSG00000310553;ID=exon:HG002_chrY_T0000002:2;Name=ENSG00000310553;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	104170	130855	.	+	.	source_gene_common_name=PLCXD1;source_gene=ENSG00000292344.1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;gene_id=HG002_chrY_G0000003;gene_biotype=protein_coding;gene_name=PLCXD1;gene_sources=liftoff,transMap,transMap_pairwise;ID=HG002_chrY_G0000003;Name=PLCXD1
HG002_chrY	CAT	transcript	104170	130852	100	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG002_chrY_T0000003;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_G0000003;transcript_name=HG002_chrY_T0000003;gene_name=PLCXD1;ID=HG002_chrY_T0000003;Name=PLCXD1
HG002_chrY	CAT	exon	104170	104242	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG002_chrY_T0000003;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000003;transcript_name=HG002_chrY_T0000003;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000003:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	104243	109172	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG002_chrY_T0000003;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000003;transcript_name=HG002_chrY_T0000003;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000003:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	109173	109375	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG002_chrY_T0000003;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000003;transcript_name=HG002_chrY_T0000003;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000003:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	109376	112067	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG002_chrY_T0000003;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000003;transcript_name=HG002_chrY_T0000003;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000003:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	112068	112215	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG002_chrY_T0000003;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000003;transcript_name=HG002_chrY_T0000003;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000003:2;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	112089	112215	.	+	0	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG002_chrY_T0000003;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000003;transcript_name=HG002_chrY_T0000003;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000003:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	112089	112091	.	+	0	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG002_chrY_T0000003;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000003;transcript_name=HG002_chrY_T0000003;gene_name=PLCXD1;ID=start_codon:HG002_chrY_T0000003;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	112216	116851	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG002_chrY_T0000003;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000003;transcript_name=HG002_chrY_T0000003;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000003:2;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	116852	116988	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG002_chrY_T0000003;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000003;transcript_name=HG002_chrY_T0000003;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000003:3;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	116852	116988	.	+	2	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG002_chrY_T0000003;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000003;transcript_name=HG002_chrY_T0000003;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000003:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	116989	118766	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG002_chrY_T0000003;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000003;transcript_name=HG002_chrY_T0000003;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000003:3;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	118767	118895	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG002_chrY_T0000003;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000003;transcript_name=HG002_chrY_T0000003;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000003:4;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	118767	118895	.	+	0	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG002_chrY_T0000003;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000003;transcript_name=HG002_chrY_T0000003;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000003:2;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	118896	119493	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG002_chrY_T0000003;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000003;transcript_name=HG002_chrY_T0000003;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000003:4;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	119494	119649	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG002_chrY_T0000003;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000003;transcript_name=HG002_chrY_T0000003;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000003:5;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	119494	119649	.	+	0	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG002_chrY_T0000003;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000003;transcript_name=HG002_chrY_T0000003;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000003:3;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	119650	121029	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG002_chrY_T0000003;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000003;transcript_name=HG002_chrY_T0000003;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000003:5;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	121030	121213	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG002_chrY_T0000003;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000003;transcript_name=HG002_chrY_T0000003;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000003:6;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	121030	121213	.	+	0	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG002_chrY_T0000003;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000003;transcript_name=HG002_chrY_T0000003;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000003:4;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	121214	126593	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG002_chrY_T0000003;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000003;transcript_name=HG002_chrY_T0000003;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000003:6;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	126594	130852	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG002_chrY_T0000003;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000003;transcript_name=HG002_chrY_T0000003;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000003:7;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	126594	126832	.	+	2	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG002_chrY_T0000003;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000003;transcript_name=HG002_chrY_T0000003;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000003:5;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	126830	126832	.	+	0	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG002_chrY_T0000003;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000003;transcript_name=HG002_chrY_T0000003;gene_name=PLCXD1;ID=stop_codon:HG002_chrY_T0000003;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	104172	119532	1000	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=HG002_chrY_T0000004;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_G0000003;transcript_name=HG002_chrY_T0000004;gene_name=PLCXD1;ID=HG002_chrY_T0000004;Name=PLCXD1
HG002_chrY	CAT	exon	104172	104242	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=HG002_chrY_T0000004;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000004;transcript_name=HG002_chrY_T0000004;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	104243	112067	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=HG002_chrY_T0000004;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000004;transcript_name=HG002_chrY_T0000004;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	112068	112215	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=HG002_chrY_T0000004;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000004;transcript_name=HG002_chrY_T0000004;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	112216	116851	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=HG002_chrY_T0000004;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000004;transcript_name=HG002_chrY_T0000004;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	116852	116988	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=HG002_chrY_T0000004;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000004;transcript_name=HG002_chrY_T0000004;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	116989	118766	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=HG002_chrY_T0000004;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000004;transcript_name=HG002_chrY_T0000004;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	118767	118911	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=HG002_chrY_T0000004;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000004;transcript_name=HG002_chrY_T0000004;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	118912	119493	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=HG002_chrY_T0000004;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000004;transcript_name=HG002_chrY_T0000004;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	119494	119532	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=HG002_chrY_T0000004;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000004;transcript_name=HG002_chrY_T0000004;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000004:4;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	104201	119624	100	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG002_chrY_T0000005;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_G0000003;transcript_name=HG002_chrY_T0000005;gene_name=PLCXD1;ID=HG002_chrY_T0000005;Name=PLCXD1
HG002_chrY	CAT	exon	104201	104242	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG002_chrY_T0000005;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000005;transcript_name=HG002_chrY_T0000005;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000005:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	104243	112067	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG002_chrY_T0000005;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000005;transcript_name=HG002_chrY_T0000005;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000005:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	112068	112215	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG002_chrY_T0000005;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000005;transcript_name=HG002_chrY_T0000005;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000005:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	112089	112215	.	+	0	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG002_chrY_T0000005;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000005;transcript_name=HG002_chrY_T0000005;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000005:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	112089	112091	.	+	0	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG002_chrY_T0000005;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000005;transcript_name=HG002_chrY_T0000005;gene_name=PLCXD1;ID=start_codon:HG002_chrY_T0000005;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	112216	116851	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG002_chrY_T0000005;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000005;transcript_name=HG002_chrY_T0000005;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000005:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	116852	116988	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG002_chrY_T0000005;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000005;transcript_name=HG002_chrY_T0000005;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000005:2;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	116852	116988	.	+	2	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG002_chrY_T0000005;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000005;transcript_name=HG002_chrY_T0000005;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000005:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	116989	118766	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG002_chrY_T0000005;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000005;transcript_name=HG002_chrY_T0000005;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000005:2;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	118767	118895	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG002_chrY_T0000005;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000005;transcript_name=HG002_chrY_T0000005;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000005:3;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	118767	118895	.	+	0	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG002_chrY_T0000005;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000005;transcript_name=HG002_chrY_T0000005;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000005:2;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	118896	119493	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG002_chrY_T0000005;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000005;transcript_name=HG002_chrY_T0000005;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000005:3;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	119494	119624	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG002_chrY_T0000005;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000005;transcript_name=HG002_chrY_T0000005;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000005:4;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	119494	119624	.	+	0	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG002_chrY_T0000005;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000005;transcript_name=HG002_chrY_T0000005;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000005:3;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	108745	116988	100	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000007;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_G0000003;transcript_name=HG002_chrY_T0000007;gene_name=PLCXD1;ID=HG002_chrY_T0000007;Name=PLCXD1
HG002_chrY	CAT	exon	108745	108812	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000007;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000007;transcript_name=HG002_chrY_T0000007;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000007:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	108813	109172	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000007;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000007;transcript_name=HG002_chrY_T0000007;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000007:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	109173	109375	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000007;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000007;transcript_name=HG002_chrY_T0000007;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000007:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	109376	112067	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000007;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000007;transcript_name=HG002_chrY_T0000007;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000007:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	112068	112215	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000007;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000007;transcript_name=HG002_chrY_T0000007;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000007:2;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	112089	112215	.	+	0	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000007;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000007;transcript_name=HG002_chrY_T0000007;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000007:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	112089	112091	.	+	0	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000007;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000007;transcript_name=HG002_chrY_T0000007;gene_name=PLCXD1;ID=start_codon:HG002_chrY_T0000007;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	112216	116851	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000007;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000007;transcript_name=HG002_chrY_T0000007;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000007:2;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	116852	116988	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000007;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000007;transcript_name=HG002_chrY_T0000007;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000007:3;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	116852	116988	.	+	2	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000007;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000007;transcript_name=HG002_chrY_T0000007;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000007:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	108788	116988	9720	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000008;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_G0000003;transcript_name=HG002_chrY_T0000008;gene_name=PLCXD1;ID=HG002_chrY_T0000008;Name=PLCXD1
HG002_chrY	CAT	exon	108788	108812	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000008;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000008;transcript_name=HG002_chrY_T0000008;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000008:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	108813	109172	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000008;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000008;transcript_name=HG002_chrY_T0000008;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000008:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	109173	109375	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000008;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000008;transcript_name=HG002_chrY_T0000008;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000008:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	109376	112067	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000008;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000008;transcript_name=HG002_chrY_T0000008;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000008:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	112068	112215	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000008;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000008;transcript_name=HG002_chrY_T0000008;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000008:2;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	112089	112215	.	+	0	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000008;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000008;transcript_name=HG002_chrY_T0000008;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000008:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	112089	112091	.	+	0	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000008;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000008;transcript_name=HG002_chrY_T0000008;gene_name=PLCXD1;ID=start_codon:HG002_chrY_T0000008;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	112216	116851	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000008;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000008;transcript_name=HG002_chrY_T0000008;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000008:2;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	116852	116988	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000008;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000008;transcript_name=HG002_chrY_T0000008;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000008:3;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	116852	116988	.	+	2	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000008;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000008;transcript_name=HG002_chrY_T0000008;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000008:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	108793	116988	9720	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000009;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_G0000003;transcript_name=HG002_chrY_T0000009;gene_name=PLCXD1;ID=HG002_chrY_T0000009;Name=PLCXD1
HG002_chrY	CAT	exon	108793	108812	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000009;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000009;transcript_name=HG002_chrY_T0000009;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000009:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	108813	109172	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000009;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000009;transcript_name=HG002_chrY_T0000009;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000009:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	109173	109375	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000009;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000009;transcript_name=HG002_chrY_T0000009;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000009:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	109376	112067	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000009;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000009;transcript_name=HG002_chrY_T0000009;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000009:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	112068	112215	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000009;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000009;transcript_name=HG002_chrY_T0000009;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000009:2;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	112089	112215	.	+	0	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000009;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000009;transcript_name=HG002_chrY_T0000009;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000009:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	112089	112091	.	+	0	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000009;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000009;transcript_name=HG002_chrY_T0000009;gene_name=PLCXD1;ID=start_codon:HG002_chrY_T0000009;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	112216	116851	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000009;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000009;transcript_name=HG002_chrY_T0000009;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000009:2;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	116852	116988	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000009;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000009;transcript_name=HG002_chrY_T0000009;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000009:3;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	116852	116988	.	+	2	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=HG002_chrY_T0000009;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000009;transcript_name=HG002_chrY_T0000009;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000009:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	108885	116906	100	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG002_chrY_T0000010;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_G0000003;transcript_name=HG002_chrY_T0000010;gene_name=PLCXD1;ID=HG002_chrY_T0000010;Name=PLCXD1
HG002_chrY	CAT	exon	108885	108947	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG002_chrY_T0000010;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000010;transcript_name=HG002_chrY_T0000010;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000010:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	108948	109172	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG002_chrY_T0000010;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000010;transcript_name=HG002_chrY_T0000010;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000010:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	109173	109375	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG002_chrY_T0000010;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000010;transcript_name=HG002_chrY_T0000010;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000010:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	109376	112067	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG002_chrY_T0000010;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000010;transcript_name=HG002_chrY_T0000010;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000010:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	112068	112215	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG002_chrY_T0000010;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000010;transcript_name=HG002_chrY_T0000010;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000010:2;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	112089	112215	.	+	0	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG002_chrY_T0000010;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000010;transcript_name=HG002_chrY_T0000010;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000010:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	112089	112091	.	+	0	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG002_chrY_T0000010;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000010;transcript_name=HG002_chrY_T0000010;gene_name=PLCXD1;ID=start_codon:HG002_chrY_T0000010;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	112216	116851	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG002_chrY_T0000010;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000010;transcript_name=HG002_chrY_T0000010;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000010:2;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	116852	116906	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG002_chrY_T0000010;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000010;transcript_name=HG002_chrY_T0000010;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000010:3;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	116852	116906	.	+	2	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG002_chrY_T0000010;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000010;transcript_name=HG002_chrY_T0000010;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000010:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	109072	130855	100	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG002_chrY_T0000011;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_G0000003;transcript_name=HG002_chrY_T0000011;gene_name=PLCXD1;ID=HG002_chrY_T0000011;Name=PLCXD1
HG002_chrY	CAT	exon	109072	109375	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG002_chrY_T0000011;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000011;transcript_name=HG002_chrY_T0000011;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000011:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	109376	112067	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG002_chrY_T0000011;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000011;transcript_name=HG002_chrY_T0000011;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000011:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	112068	112215	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG002_chrY_T0000011;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000011;transcript_name=HG002_chrY_T0000011;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000011:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	112089	112215	.	+	0	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG002_chrY_T0000011;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000011;transcript_name=HG002_chrY_T0000011;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000011:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	112089	112091	.	+	0	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG002_chrY_T0000011;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000011;transcript_name=HG002_chrY_T0000011;gene_name=PLCXD1;ID=start_codon:HG002_chrY_T0000011;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	112216	116851	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG002_chrY_T0000011;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000011;transcript_name=HG002_chrY_T0000011;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000011:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	116852	116988	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG002_chrY_T0000011;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000011;transcript_name=HG002_chrY_T0000011;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000011:2;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	116852	116988	.	+	2	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG002_chrY_T0000011;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000011;transcript_name=HG002_chrY_T0000011;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000011:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	116989	118766	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG002_chrY_T0000011;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000011;transcript_name=HG002_chrY_T0000011;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000011:2;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	118767	118895	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG002_chrY_T0000011;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000011;transcript_name=HG002_chrY_T0000011;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000011:3;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	118767	118895	.	+	0	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG002_chrY_T0000011;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000011;transcript_name=HG002_chrY_T0000011;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000011:2;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	118896	119493	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG002_chrY_T0000011;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000011;transcript_name=HG002_chrY_T0000011;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000011:3;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	119494	119649	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG002_chrY_T0000011;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000011;transcript_name=HG002_chrY_T0000011;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000011:4;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	119494	119649	.	+	0	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG002_chrY_T0000011;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000011;transcript_name=HG002_chrY_T0000011;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000011:3;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	119650	121029	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG002_chrY_T0000011;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000011;transcript_name=HG002_chrY_T0000011;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000011:4;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	121030	121213	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG002_chrY_T0000011;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000011;transcript_name=HG002_chrY_T0000011;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000011:5;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	121030	121213	.	+	0	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG002_chrY_T0000011;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000011;transcript_name=HG002_chrY_T0000011;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000011:4;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	121214	126593	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG002_chrY_T0000011;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000011;transcript_name=HG002_chrY_T0000011;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000011:5;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	126594	130855	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG002_chrY_T0000011;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000011;transcript_name=HG002_chrY_T0000011;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000011:6;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	126594	126832	.	+	2	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG002_chrY_T0000011;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000011;transcript_name=HG002_chrY_T0000011;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000011:5;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	126830	126832	.	+	0	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG002_chrY_T0000011;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000011;transcript_name=HG002_chrY_T0000011;gene_name=PLCXD1;ID=stop_codon:HG002_chrY_T0000011;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	110840	116948	100	+	.	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=HG002_chrY_T0000012;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_G0000003;transcript_name=HG002_chrY_T0000012;gene_name=PLCXD1;ID=HG002_chrY_T0000012;Name=PLCXD1
HG002_chrY	CAT	exon	110840	110878	.	+	.	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=HG002_chrY_T0000012;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000012;transcript_name=HG002_chrY_T0000012;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000012:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	110879	112067	.	+	.	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=HG002_chrY_T0000012;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000012;transcript_name=HG002_chrY_T0000012;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000012:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	112068	112215	.	+	.	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=HG002_chrY_T0000012;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000012;transcript_name=HG002_chrY_T0000012;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000012:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	112089	112215	.	+	0	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=HG002_chrY_T0000012;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000012;transcript_name=HG002_chrY_T0000012;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000012:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	112089	112091	.	+	0	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=HG002_chrY_T0000012;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000012;transcript_name=HG002_chrY_T0000012;gene_name=PLCXD1;ID=start_codon:HG002_chrY_T0000012;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	112216	116851	.	+	.	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=HG002_chrY_T0000012;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000012;transcript_name=HG002_chrY_T0000012;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000012:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	116852	116948	.	+	.	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=HG002_chrY_T0000012;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000012;transcript_name=HG002_chrY_T0000012;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000012:2;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	116852	116948	.	+	2	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=HG002_chrY_T0000012;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000012;transcript_name=HG002_chrY_T0000012;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000012:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	111143	119634	100	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG002_chrY_T0000013;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_G0000003;transcript_name=HG002_chrY_T0000013;gene_name=PLCXD1;ID=HG002_chrY_T0000013;Name=PLCXD1
HG002_chrY	CAT	exon	111143	111166	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG002_chrY_T0000013;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000013;transcript_name=HG002_chrY_T0000013;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000013:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	111167	112067	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG002_chrY_T0000013;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000013;transcript_name=HG002_chrY_T0000013;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000013:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	112068	112215	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG002_chrY_T0000013;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000013;transcript_name=HG002_chrY_T0000013;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000013:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	112089	112215	.	+	0	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG002_chrY_T0000013;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000013;transcript_name=HG002_chrY_T0000013;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000013:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	112089	112091	.	+	0	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG002_chrY_T0000013;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000013;transcript_name=HG002_chrY_T0000013;gene_name=PLCXD1;ID=start_codon:HG002_chrY_T0000013;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	112216	116851	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG002_chrY_T0000013;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000013;transcript_name=HG002_chrY_T0000013;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000013:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	116852	116988	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG002_chrY_T0000013;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000013;transcript_name=HG002_chrY_T0000013;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000013:2;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	116852	116988	.	+	2	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG002_chrY_T0000013;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000013;transcript_name=HG002_chrY_T0000013;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000013:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	116989	118766	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG002_chrY_T0000013;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000013;transcript_name=HG002_chrY_T0000013;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000013:2;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	118767	118895	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG002_chrY_T0000013;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000013;transcript_name=HG002_chrY_T0000013;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000013:3;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	118767	118895	.	+	0	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG002_chrY_T0000013;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000013;transcript_name=HG002_chrY_T0000013;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000013:2;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	118896	119493	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG002_chrY_T0000013;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000013;transcript_name=HG002_chrY_T0000013;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000013:3;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	119494	119634	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG002_chrY_T0000013;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000013;transcript_name=HG002_chrY_T0000013;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000013:4;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	119494	119634	.	+	0	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG002_chrY_T0000013;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000013;transcript_name=HG002_chrY_T0000013;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000013:3;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	111157	119624	100	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG002_chrY_T0000014;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_G0000003;transcript_name=HG002_chrY_T0000014;gene_name=PLCXD1;ID=HG002_chrY_T0000014;Name=PLCXD1
HG002_chrY	CAT	exon	111157	111198	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG002_chrY_T0000014;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000014;transcript_name=HG002_chrY_T0000014;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000014:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	111199	112067	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG002_chrY_T0000014;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000014;transcript_name=HG002_chrY_T0000014;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000014:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	112068	112215	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG002_chrY_T0000014;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000014;transcript_name=HG002_chrY_T0000014;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000014:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	112089	112215	.	+	0	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG002_chrY_T0000014;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000014;transcript_name=HG002_chrY_T0000014;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000014:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	112089	112091	.	+	0	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG002_chrY_T0000014;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000014;transcript_name=HG002_chrY_T0000014;gene_name=PLCXD1;ID=start_codon:HG002_chrY_T0000014;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	112216	116851	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG002_chrY_T0000014;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000014;transcript_name=HG002_chrY_T0000014;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000014:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	116852	116988	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG002_chrY_T0000014;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000014;transcript_name=HG002_chrY_T0000014;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000014:2;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	116852	116988	.	+	2	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG002_chrY_T0000014;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000014;transcript_name=HG002_chrY_T0000014;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000014:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	116989	118766	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG002_chrY_T0000014;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000014;transcript_name=HG002_chrY_T0000014;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000014:2;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	118767	118895	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG002_chrY_T0000014;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000014;transcript_name=HG002_chrY_T0000014;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000014:3;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	118767	118895	.	+	0	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG002_chrY_T0000014;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000014;transcript_name=HG002_chrY_T0000014;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000014:2;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	118896	119493	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG002_chrY_T0000014;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000014;transcript_name=HG002_chrY_T0000014;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000014:3;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	119494	119624	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG002_chrY_T0000014;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000014;transcript_name=HG002_chrY_T0000014;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000014:4;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	119494	119624	.	+	0	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG002_chrY_T0000014;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000014;transcript_name=HG002_chrY_T0000014;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000014:3;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	111636	118876	100	+	.	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=HG002_chrY_T0000015;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_G0000003;transcript_name=HG002_chrY_T0000015;gene_name=PLCXD1;ID=HG002_chrY_T0000015;Name=PLCXD1
HG002_chrY	CAT	exon	111636	112215	.	+	.	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=HG002_chrY_T0000015;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000015;transcript_name=HG002_chrY_T0000015;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000015:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	112089	112215	.	+	0	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=HG002_chrY_T0000015;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000015;transcript_name=HG002_chrY_T0000015;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000015:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	112089	112091	.	+	0	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=HG002_chrY_T0000015;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000015;transcript_name=HG002_chrY_T0000015;gene_name=PLCXD1;ID=start_codon:HG002_chrY_T0000015;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	112216	116851	.	+	.	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=HG002_chrY_T0000015;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000015;transcript_name=HG002_chrY_T0000015;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000015:0;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	116852	116988	.	+	.	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=HG002_chrY_T0000015;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000015;transcript_name=HG002_chrY_T0000015;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000015:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	116852	116988	.	+	2	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=HG002_chrY_T0000015;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000015;transcript_name=HG002_chrY_T0000015;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000015:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	116989	118766	.	+	.	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=HG002_chrY_T0000015;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000015;transcript_name=HG002_chrY_T0000015;gene_name=PLCXD1;ID=intron:HG002_chrY_T0000015:1;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	118767	118876	.	+	.	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=HG002_chrY_T0000015;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000015;transcript_name=HG002_chrY_T0000015;gene_name=PLCXD1;ID=exon:HG002_chrY_T0000015:2;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	118767	118876	.	+	0	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=HG002_chrY_T0000015;gene_id=HG002_chrY_G0000003;Parent=HG002_chrY_T0000015;transcript_name=HG002_chrY_T0000015;gene_name=PLCXD1;ID=CDS:HG002_chrY_T0000015:2;Name=PLCXD1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	106794	109516	.	-	.	source_gene_common_name=ENSG00000310554;source_gene=ENSG00000310554.1;alternative_source_transcripts=ENST00000850733.1,ENST00000850733.1;gene_id=HG002_chrY_G0000004;gene_biotype=lncRNA;gene_name=ENSG00000310554;gene_sources=liftoff;ID=HG002_chrY_G0000004;Name=ENSG00000310554
HG002_chrY	CAT	transcript	106794	109516	1000	-	.	source_transcript=ENST00000850733.1;source_transcript_name=ENST00000850733;source_gene=ENSG00000310554.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310554.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850733.1;transcript_score=299.743;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310554;alternative_source_transcripts=ENST00000850733.1,ENST00000850733.1;transcript_id=HG002_chrY_T0000006;gene_id=HG002_chrY_G0000004;Parent=HG002_chrY_G0000004;transcript_name=HG002_chrY_T0000006;gene_name=ENSG00000310554;ID=HG002_chrY_T0000006;Name=ENSG00000310554
HG002_chrY	CAT	exon	106794	107620	.	-	.	source_transcript=ENST00000850733.1;source_transcript_name=ENST00000850733;source_gene=ENSG00000310554.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310554.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850733.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310554;alternative_source_transcripts=ENST00000850733.1,ENST00000850733.1;transcript_id=HG002_chrY_T0000006;gene_id=HG002_chrY_G0000004;Parent=HG002_chrY_T0000006;transcript_name=HG002_chrY_T0000006;gene_name=ENSG00000310554;ID=exon:HG002_chrY_T0000006:0;Name=ENSG00000310554;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	107621	109176	.	-	.	source_transcript=ENST00000850733.1;source_transcript_name=ENST00000850733;source_gene=ENSG00000310554.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310554.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850733.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310554;alternative_source_transcripts=ENST00000850733.1,ENST00000850733.1;transcript_id=HG002_chrY_T0000006;gene_id=HG002_chrY_G0000004;Parent=HG002_chrY_T0000006;transcript_name=HG002_chrY_T0000006;gene_name=ENSG00000310554;ID=intron:HG002_chrY_T0000006:0;Name=ENSG00000310554;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	109177	109516	.	-	.	source_transcript=ENST00000850733.1;source_transcript_name=ENST00000850733;source_gene=ENSG00000310554.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310554.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850733.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310554;alternative_source_transcripts=ENST00000850733.1,ENST00000850733.1;transcript_id=HG002_chrY_T0000006;gene_id=HG002_chrY_G0000004;Parent=HG002_chrY_T0000006;transcript_name=HG002_chrY_T0000006;gene_name=ENSG00000310554;ID=exon:HG002_chrY_T0000006:1;Name=ENSG00000310554;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	130845	149060	.	-	.	source_gene_common_name=GTPBP6;source_gene=ENSG00000292358.2;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;gene_id=HG002_chrY_G0000005;gene_biotype=protein_coding;gene_name=GTPBP6;gene_sources=liftoff,transMap,transMap_pairwise;ID=HG002_chrY_G0000005;Name=GTPBP6
HG002_chrY	CAT	transcript	130845	149060	100	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG002_chrY_T0000016;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_G0000005;transcript_name=HG002_chrY_T0000016;gene_name=GTPBP6;ID=HG002_chrY_T0000016;Name=GTPBP6
HG002_chrY	CAT	exon	130845	132696	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG002_chrY_T0000016;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000016;transcript_name=HG002_chrY_T0000016;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000016:0;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	132573	132696	.	-	1	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG002_chrY_T0000016;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000016;transcript_name=HG002_chrY_T0000016;gene_name=GTPBP6;ID=CDS:HG002_chrY_T0000016:0;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	132573	132575	.	-	0	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG002_chrY_T0000016;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000016;transcript_name=HG002_chrY_T0000016;gene_name=GTPBP6;ID=stop_codon:HG002_chrY_T0000016;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	132697	134858	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG002_chrY_T0000016;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000016;transcript_name=HG002_chrY_T0000016;gene_name=GTPBP6;ID=intron:HG002_chrY_T0000016:0;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	134859	135011	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG002_chrY_T0000016;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000016;transcript_name=HG002_chrY_T0000016;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000016:1;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	134859	135011	.	-	1	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG002_chrY_T0000016;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000016;transcript_name=HG002_chrY_T0000016;gene_name=GTPBP6;ID=CDS:HG002_chrY_T0000016:1;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	135012	135230	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG002_chrY_T0000016;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000016;transcript_name=HG002_chrY_T0000016;gene_name=GTPBP6;ID=intron:HG002_chrY_T0000016:1;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	135231	135379	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG002_chrY_T0000016;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000016;transcript_name=HG002_chrY_T0000016;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000016:2;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	135231	135379	.	-	0	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG002_chrY_T0000016;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000016;transcript_name=HG002_chrY_T0000016;gene_name=GTPBP6;ID=CDS:HG002_chrY_T0000016:2;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	135380	138917	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG002_chrY_T0000016;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000016;transcript_name=HG002_chrY_T0000016;gene_name=GTPBP6;ID=intron:HG002_chrY_T0000016:2;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	138918	139126	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG002_chrY_T0000016;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000016;transcript_name=HG002_chrY_T0000016;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000016:3;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	138918	139126	.	-	2	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG002_chrY_T0000016;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000016;transcript_name=HG002_chrY_T0000016;gene_name=GTPBP6;ID=CDS:HG002_chrY_T0000016:3;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	139127	140367	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG002_chrY_T0000016;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000016;transcript_name=HG002_chrY_T0000016;gene_name=GTPBP6;ID=intron:HG002_chrY_T0000016:3;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	140368	140526	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG002_chrY_T0000016;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000016;transcript_name=HG002_chrY_T0000016;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000016:4;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	140368	140526	.	-	2	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG002_chrY_T0000016;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000016;transcript_name=HG002_chrY_T0000016;gene_name=GTPBP6;ID=CDS:HG002_chrY_T0000016:4;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	140527	141751	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG002_chrY_T0000016;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000016;transcript_name=HG002_chrY_T0000016;gene_name=GTPBP6;ID=intron:HG002_chrY_T0000016:4;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	141752	141819	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG002_chrY_T0000016;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000016;transcript_name=HG002_chrY_T0000016;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000016:5;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	141752	141819	.	-	1	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG002_chrY_T0000016;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000016;transcript_name=HG002_chrY_T0000016;gene_name=GTPBP6;ID=CDS:HG002_chrY_T0000016:5;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	141820	142491	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG002_chrY_T0000016;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000016;transcript_name=HG002_chrY_T0000016;gene_name=GTPBP6;ID=intron:HG002_chrY_T0000016:5;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	142492	142622	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG002_chrY_T0000016;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000016;transcript_name=HG002_chrY_T0000016;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000016:6;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	142492	142622	.	-	0	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG002_chrY_T0000016;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000016;transcript_name=HG002_chrY_T0000016;gene_name=GTPBP6;ID=CDS:HG002_chrY_T0000016:6;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	142623	142827	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG002_chrY_T0000016;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000016;transcript_name=HG002_chrY_T0000016;gene_name=GTPBP6;ID=intron:HG002_chrY_T0000016:6;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	142828	142898	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG002_chrY_T0000016;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000016;transcript_name=HG002_chrY_T0000016;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000016:7;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	142828	142898	.	-	2	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG002_chrY_T0000016;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000016;transcript_name=HG002_chrY_T0000016;gene_name=GTPBP6;ID=CDS:HG002_chrY_T0000016:7;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	142899	147176	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG002_chrY_T0000016;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000016;transcript_name=HG002_chrY_T0000016;gene_name=GTPBP6;ID=intron:HG002_chrY_T0000016:7;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	147177	147314	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG002_chrY_T0000016;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000016;transcript_name=HG002_chrY_T0000016;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000016:8;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	147177	147314	.	-	2	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG002_chrY_T0000016;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000016;transcript_name=HG002_chrY_T0000016;gene_name=GTPBP6;ID=CDS:HG002_chrY_T0000016:8;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	147315	148700	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG002_chrY_T0000016;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000016;transcript_name=HG002_chrY_T0000016;gene_name=GTPBP6;ID=intron:HG002_chrY_T0000016:8;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	148701	149060	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG002_chrY_T0000016;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000016;transcript_name=HG002_chrY_T0000016;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000016:9;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	148701	149049	.	-	0	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG002_chrY_T0000016;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000016;transcript_name=HG002_chrY_T0000016;gene_name=GTPBP6;ID=CDS:HG002_chrY_T0000016:9;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	149047	149049	.	-	0	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG002_chrY_T0000016;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000016;transcript_name=HG002_chrY_T0000016;gene_name=GTPBP6;ID=start_codon:HG002_chrY_T0000016;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	132028	140059	1000	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=HG002_chrY_T0000017;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_G0000005;transcript_name=HG002_chrY_T0000017;gene_name=GTPBP6;ID=HG002_chrY_T0000017;Name=GTPBP6
HG002_chrY	CAT	exon	132028	132696	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=HG002_chrY_T0000017;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000017;transcript_name=HG002_chrY_T0000017;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000017:0;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	132697	134858	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=HG002_chrY_T0000017;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000017;transcript_name=HG002_chrY_T0000017;gene_name=GTPBP6;ID=intron:HG002_chrY_T0000017:0;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	134859	135011	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=HG002_chrY_T0000017;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000017;transcript_name=HG002_chrY_T0000017;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000017:1;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	135012	135230	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=HG002_chrY_T0000017;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000017;transcript_name=HG002_chrY_T0000017;gene_name=GTPBP6;ID=intron:HG002_chrY_T0000017:1;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	135231	135379	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=HG002_chrY_T0000017;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000017;transcript_name=HG002_chrY_T0000017;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000017:2;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	135380	138917	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=HG002_chrY_T0000017;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000017;transcript_name=HG002_chrY_T0000017;gene_name=GTPBP6;ID=intron:HG002_chrY_T0000017:2;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	138918	139641	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=HG002_chrY_T0000017;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000017;transcript_name=HG002_chrY_T0000017;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000017:3;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	139642	139738	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=HG002_chrY_T0000017;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000017;transcript_name=HG002_chrY_T0000017;gene_name=GTPBP6;ID=intron:HG002_chrY_T0000017:3;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	139739	140059	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=HG002_chrY_T0000017;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000017;transcript_name=HG002_chrY_T0000017;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000017:4;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	132028	140059	1000	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=HG002_chrY_T0000018;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_G0000005;transcript_name=HG002_chrY_T0000018;gene_name=GTPBP6;ID=HG002_chrY_T0000018;Name=GTPBP6
HG002_chrY	CAT	exon	132028	132696	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=HG002_chrY_T0000018;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000018;transcript_name=HG002_chrY_T0000018;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000018:0;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	132697	134858	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=HG002_chrY_T0000018;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000018;transcript_name=HG002_chrY_T0000018;gene_name=GTPBP6;ID=intron:HG002_chrY_T0000018:0;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	134859	135011	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=HG002_chrY_T0000018;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000018;transcript_name=HG002_chrY_T0000018;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000018:1;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	135012	135230	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=HG002_chrY_T0000018;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000018;transcript_name=HG002_chrY_T0000018;gene_name=GTPBP6;ID=intron:HG002_chrY_T0000018:1;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	135231	135379	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=HG002_chrY_T0000018;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000018;transcript_name=HG002_chrY_T0000018;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000018:2;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	135380	138917	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=HG002_chrY_T0000018;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000018;transcript_name=HG002_chrY_T0000018;gene_name=GTPBP6;ID=intron:HG002_chrY_T0000018:2;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	138918	139692	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=HG002_chrY_T0000018;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000018;transcript_name=HG002_chrY_T0000018;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000018:3;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	139693	139789	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=HG002_chrY_T0000018;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000018;transcript_name=HG002_chrY_T0000018;gene_name=GTPBP6;ID=intron:HG002_chrY_T0000018:3;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	139790	140059	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=HG002_chrY_T0000018;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000018;transcript_name=HG002_chrY_T0000018;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000018:4;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	132028	140059	1000	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=HG002_chrY_T0000019;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_G0000005;transcript_name=HG002_chrY_T0000019;gene_name=GTPBP6;ID=HG002_chrY_T0000019;Name=GTPBP6
HG002_chrY	CAT	exon	132028	132696	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=HG002_chrY_T0000019;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000019;transcript_name=HG002_chrY_T0000019;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000019:0;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	132697	134858	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=HG002_chrY_T0000019;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000019;transcript_name=HG002_chrY_T0000019;gene_name=GTPBP6;ID=intron:HG002_chrY_T0000019:0;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	134859	135011	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=HG002_chrY_T0000019;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000019;transcript_name=HG002_chrY_T0000019;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000019:1;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	135012	135230	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=HG002_chrY_T0000019;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000019;transcript_name=HG002_chrY_T0000019;gene_name=GTPBP6;ID=intron:HG002_chrY_T0000019:1;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	135231	135379	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=HG002_chrY_T0000019;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000019;transcript_name=HG002_chrY_T0000019;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000019:2;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	135380	138917	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=HG002_chrY_T0000019;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000019;transcript_name=HG002_chrY_T0000019;gene_name=GTPBP6;ID=intron:HG002_chrY_T0000019:2;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	138918	140059	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=HG002_chrY_T0000019;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000019;transcript_name=HG002_chrY_T0000019;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000019:3;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	132258	149058	100	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG002_chrY_T0000020;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_G0000005;transcript_name=HG002_chrY_T0000020;gene_name=GTPBP6;ID=HG002_chrY_T0000020;Name=GTPBP6
HG002_chrY	CAT	exon	132258	132696	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG002_chrY_T0000020;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000020;transcript_name=HG002_chrY_T0000020;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000020:0;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	132573	132696	.	-	1	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG002_chrY_T0000020;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000020;transcript_name=HG002_chrY_T0000020;gene_name=GTPBP6;ID=CDS:HG002_chrY_T0000020:0;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	132573	132575	.	-	0	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG002_chrY_T0000020;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000020;transcript_name=HG002_chrY_T0000020;gene_name=GTPBP6;ID=stop_codon:HG002_chrY_T0000020;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	132697	134858	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG002_chrY_T0000020;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000020;transcript_name=HG002_chrY_T0000020;gene_name=GTPBP6;ID=intron:HG002_chrY_T0000020:0;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	134859	135011	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG002_chrY_T0000020;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000020;transcript_name=HG002_chrY_T0000020;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000020:1;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	134859	135011	.	-	1	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG002_chrY_T0000020;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000020;transcript_name=HG002_chrY_T0000020;gene_name=GTPBP6;ID=CDS:HG002_chrY_T0000020:1;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	135012	135230	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG002_chrY_T0000020;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000020;transcript_name=HG002_chrY_T0000020;gene_name=GTPBP6;ID=intron:HG002_chrY_T0000020:1;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	135231	135379	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG002_chrY_T0000020;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000020;transcript_name=HG002_chrY_T0000020;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000020:2;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	135231	135379	.	-	0	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG002_chrY_T0000020;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000020;transcript_name=HG002_chrY_T0000020;gene_name=GTPBP6;ID=CDS:HG002_chrY_T0000020:2;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	135380	138917	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG002_chrY_T0000020;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000020;transcript_name=HG002_chrY_T0000020;gene_name=GTPBP6;ID=intron:HG002_chrY_T0000020:2;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	138918	139126	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG002_chrY_T0000020;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000020;transcript_name=HG002_chrY_T0000020;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000020:3;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	138918	139126	.	-	2	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG002_chrY_T0000020;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000020;transcript_name=HG002_chrY_T0000020;gene_name=GTPBP6;ID=CDS:HG002_chrY_T0000020:3;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	139127	140367	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG002_chrY_T0000020;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000020;transcript_name=HG002_chrY_T0000020;gene_name=GTPBP6;ID=intron:HG002_chrY_T0000020:3;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	140368	140526	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG002_chrY_T0000020;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000020;transcript_name=HG002_chrY_T0000020;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000020:4;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	140368	140526	.	-	2	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG002_chrY_T0000020;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000020;transcript_name=HG002_chrY_T0000020;gene_name=GTPBP6;ID=CDS:HG002_chrY_T0000020:4;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	140527	141751	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG002_chrY_T0000020;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000020;transcript_name=HG002_chrY_T0000020;gene_name=GTPBP6;ID=intron:HG002_chrY_T0000020:4;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	141752	141819	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG002_chrY_T0000020;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000020;transcript_name=HG002_chrY_T0000020;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000020:5;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	141752	141819	.	-	1	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG002_chrY_T0000020;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000020;transcript_name=HG002_chrY_T0000020;gene_name=GTPBP6;ID=CDS:HG002_chrY_T0000020:5;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	141820	142491	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG002_chrY_T0000020;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000020;transcript_name=HG002_chrY_T0000020;gene_name=GTPBP6;ID=intron:HG002_chrY_T0000020:5;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	142492	142622	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG002_chrY_T0000020;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000020;transcript_name=HG002_chrY_T0000020;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000020:6;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	142492	142622	.	-	0	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG002_chrY_T0000020;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000020;transcript_name=HG002_chrY_T0000020;gene_name=GTPBP6;ID=CDS:HG002_chrY_T0000020:6;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	142623	142827	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG002_chrY_T0000020;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000020;transcript_name=HG002_chrY_T0000020;gene_name=GTPBP6;ID=intron:HG002_chrY_T0000020:6;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	142828	142898	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG002_chrY_T0000020;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000020;transcript_name=HG002_chrY_T0000020;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000020:7;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	142828	142898	.	-	2	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG002_chrY_T0000020;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000020;transcript_name=HG002_chrY_T0000020;gene_name=GTPBP6;ID=CDS:HG002_chrY_T0000020:7;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	142899	147176	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG002_chrY_T0000020;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000020;transcript_name=HG002_chrY_T0000020;gene_name=GTPBP6;ID=intron:HG002_chrY_T0000020:7;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	147177	147314	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG002_chrY_T0000020;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000020;transcript_name=HG002_chrY_T0000020;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000020:8;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	147177	147314	.	-	2	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG002_chrY_T0000020;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000020;transcript_name=HG002_chrY_T0000020;gene_name=GTPBP6;ID=CDS:HG002_chrY_T0000020:8;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	147315	148700	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG002_chrY_T0000020;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000020;transcript_name=HG002_chrY_T0000020;gene_name=GTPBP6;ID=intron:HG002_chrY_T0000020:8;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	148701	149058	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG002_chrY_T0000020;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000020;transcript_name=HG002_chrY_T0000020;gene_name=GTPBP6;ID=exon:HG002_chrY_T0000020:9;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	148701	149049	.	-	0	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG002_chrY_T0000020;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000020;transcript_name=HG002_chrY_T0000020;gene_name=GTPBP6;ID=CDS:HG002_chrY_T0000020:9;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	149047	149049	.	-	0	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG002_chrY_T0000020;gene_id=HG002_chrY_G0000005;Parent=HG002_chrY_T0000020;transcript_name=HG002_chrY_T0000020;gene_name=GTPBP6;ID=start_codon:HG002_chrY_T0000020;Name=GTPBP6;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	151249	154029	.	+	.	source_gene_common_name=LINC00685;source_gene=ENSG00000292342.1;gene_id=HG002_chrY_G0000006;gene_biotype=lncRNA;gene_name=LINC00685;gene_sources=liftoff,transMap,transMap_pairwise;ID=HG002_chrY_G0000006;Name=LINC00685
HG002_chrY	CAT	transcript	151249	151969	1000	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=HG002_chrY_T0000021;gene_id=HG002_chrY_G0000006;Parent=HG002_chrY_G0000006;transcript_name=HG002_chrY_T0000021;gene_name=LINC00685;ID=HG002_chrY_T0000021;Name=LINC00685
HG002_chrY	CAT	exon	151249	151507	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=HG002_chrY_T0000021;gene_id=HG002_chrY_G0000006;Parent=HG002_chrY_T0000021;transcript_name=HG002_chrY_T0000021;gene_name=LINC00685;ID=exon:HG002_chrY_T0000021:0;Name=LINC00685;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	151508	151885	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=HG002_chrY_T0000021;gene_id=HG002_chrY_G0000006;Parent=HG002_chrY_T0000021;transcript_name=HG002_chrY_T0000021;gene_name=LINC00685;ID=intron:HG002_chrY_T0000021:0;Name=LINC00685;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	151886	151969	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=HG002_chrY_T0000021;gene_id=HG002_chrY_G0000006;Parent=HG002_chrY_T0000021;transcript_name=HG002_chrY_T0000021;gene_name=LINC00685;ID=exon:HG002_chrY_T0000021:1;Name=LINC00685;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	151249	154029	1000	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=HG002_chrY_T0000022;gene_id=HG002_chrY_G0000006;Parent=HG002_chrY_G0000006;transcript_name=HG002_chrY_T0000022;gene_name=LINC00685;ID=HG002_chrY_T0000022;Name=LINC00685
HG002_chrY	CAT	exon	151249	151507	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=HG002_chrY_T0000022;gene_id=HG002_chrY_G0000006;Parent=HG002_chrY_T0000022;transcript_name=HG002_chrY_T0000022;gene_name=LINC00685;ID=exon:HG002_chrY_T0000022:0;Name=LINC00685;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	151508	153860	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=HG002_chrY_T0000022;gene_id=HG002_chrY_G0000006;Parent=HG002_chrY_T0000022;transcript_name=HG002_chrY_T0000022;gene_name=LINC00685;ID=intron:HG002_chrY_T0000022:0;Name=LINC00685;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	153861	154029	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=HG002_chrY_T0000022;gene_id=HG002_chrY_G0000006;Parent=HG002_chrY_T0000022;transcript_name=HG002_chrY_T0000022;gene_name=LINC00685;ID=exon:HG002_chrY_T0000022:1;Name=LINC00685;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	151249	152123	1000	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=HG002_chrY_T0000023;gene_id=HG002_chrY_G0000006;Parent=HG002_chrY_G0000006;transcript_name=HG002_chrY_T0000023;gene_name=LINC00685;ID=HG002_chrY_T0000023;Name=LINC00685
HG002_chrY	CAT	exon	151249	151507	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=HG002_chrY_T0000023;gene_id=HG002_chrY_G0000006;Parent=HG002_chrY_T0000023;transcript_name=HG002_chrY_T0000023;gene_name=LINC00685;ID=exon:HG002_chrY_T0000023:0;Name=LINC00685;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	151508	151940	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=HG002_chrY_T0000023;gene_id=HG002_chrY_G0000006;Parent=HG002_chrY_T0000023;transcript_name=HG002_chrY_T0000023;gene_name=LINC00685;ID=intron:HG002_chrY_T0000023:0;Name=LINC00685;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	151941	152123	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=HG002_chrY_T0000023;gene_id=HG002_chrY_G0000006;Parent=HG002_chrY_T0000023;transcript_name=HG002_chrY_T0000023;gene_name=LINC00685;ID=exon:HG002_chrY_T0000023:1;Name=LINC00685;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	168663	224952	.	-	.	source_gene_common_name=PPP2R3B;source_gene=ENSG00000292327.1;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;gene_id=HG002_chrY_G0000007;gene_biotype=protein_coding;gene_name=PPP2R3B;gene_sources=liftoff,transMap;ID=HG002_chrY_G0000007;Name=PPP2R3B
HG002_chrY	CAT	transcript	168663	224904	100	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_G0000007;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=HG002_chrY_T0000024;Name=PPP2R3B
HG002_chrY	CAT	exon	168663	169247	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000024:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	169097	169247	.	-	1	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=CDS:HG002_chrY_T0000024:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	169097	169099	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=stop_codon:HG002_chrY_T0000024;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	169248	173333	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000024:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	173334	173440	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000024:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	173334	173440	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=CDS:HG002_chrY_T0000024:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	173441	173507	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000024:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	173508	173626	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000024:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	173508	173626	.	-	2	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=CDS:HG002_chrY_T0000024:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	173627	175491	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000024:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	175492	175667	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000024:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	175492	175667	.	-	1	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=CDS:HG002_chrY_T0000024:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	175668	176033	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000024:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	176034	176123	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000024:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	176034	176123	.	-	1	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=CDS:HG002_chrY_T0000024:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	176124	176609	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000024:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	176610	176658	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000024:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	176610	176658	.	-	2	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=CDS:HG002_chrY_T0000024:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	176659	180269	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000024:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	180270	180426	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000024:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	180270	180426	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=CDS:HG002_chrY_T0000024:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	180427	180927	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000024:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	180928	181014	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000024:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	180928	181014	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=CDS:HG002_chrY_T0000024:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	181015	181454	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000024:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	181455	181529	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000024:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	181455	181529	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=CDS:HG002_chrY_T0000024:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	181530	181987	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000024:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	181988	182090	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000024:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	181988	182090	.	-	1	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=CDS:HG002_chrY_T0000024:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	182091	182343	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000024:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	182344	182447	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000024:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	182344	182447	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=CDS:HG002_chrY_T0000024:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	182448	196436	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000024:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	196437	196622	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000024:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	196437	196622	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=CDS:HG002_chrY_T0000024:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	196623	224364	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000024:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	224365	224904	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000024:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	224365	224688	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=CDS:HG002_chrY_T0000024:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	224686	224688	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG002_chrY_T0000024;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000024;transcript_name=HG002_chrY_T0000024;gene_name=PPP2R3B;ID=start_codon:HG002_chrY_T0000024;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	168965	176438	1000	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=HG002_chrY_T0000025;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_G0000007;transcript_name=HG002_chrY_T0000025;gene_name=PPP2R3B;ID=HG002_chrY_T0000025;Name=PPP2R3B
HG002_chrY	CAT	exon	168965	169247	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=HG002_chrY_T0000025;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000025;transcript_name=HG002_chrY_T0000025;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000025:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	169248	173333	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=HG002_chrY_T0000025;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000025;transcript_name=HG002_chrY_T0000025;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000025:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	173334	173626	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=HG002_chrY_T0000025;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000025;transcript_name=HG002_chrY_T0000025;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000025:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	173627	175491	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=HG002_chrY_T0000025;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000025;transcript_name=HG002_chrY_T0000025;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000025:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	175492	175667	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=HG002_chrY_T0000025;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000025;transcript_name=HG002_chrY_T0000025;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000025:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	175668	176033	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=HG002_chrY_T0000025;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000025;transcript_name=HG002_chrY_T0000025;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000025:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	176034	176438	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=HG002_chrY_T0000025;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000025;transcript_name=HG002_chrY_T0000025;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000025:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	168965	176438	1000	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG002_chrY_T0000026;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_G0000007;transcript_name=HG002_chrY_T0000026;gene_name=PPP2R3B;ID=HG002_chrY_T0000026;Name=PPP2R3B
HG002_chrY	CAT	exon	168965	169247	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG002_chrY_T0000026;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000026;transcript_name=HG002_chrY_T0000026;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000026:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	169248	173333	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG002_chrY_T0000026;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000026;transcript_name=HG002_chrY_T0000026;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000026:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	173334	173440	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG002_chrY_T0000026;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000026;transcript_name=HG002_chrY_T0000026;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000026:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	173441	173507	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG002_chrY_T0000026;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000026;transcript_name=HG002_chrY_T0000026;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000026:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	173508	173626	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG002_chrY_T0000026;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000026;transcript_name=HG002_chrY_T0000026;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000026:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	173627	175491	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG002_chrY_T0000026;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000026;transcript_name=HG002_chrY_T0000026;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000026:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	175492	175667	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG002_chrY_T0000026;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000026;transcript_name=HG002_chrY_T0000026;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000026:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	175668	176033	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG002_chrY_T0000026;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000026;transcript_name=HG002_chrY_T0000026;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000026:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	176034	176438	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG002_chrY_T0000026;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000026;transcript_name=HG002_chrY_T0000026;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000026:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	168969	182078	1000	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG002_chrY_T0000027;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_G0000007;transcript_name=HG002_chrY_T0000027;gene_name=PPP2R3B;ID=HG002_chrY_T0000027;Name=PPP2R3B
HG002_chrY	CAT	exon	168969	173626	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG002_chrY_T0000027;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000027;transcript_name=HG002_chrY_T0000027;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000027:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	173627	175491	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG002_chrY_T0000027;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000027;transcript_name=HG002_chrY_T0000027;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000027:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	175492	175667	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG002_chrY_T0000027;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000027;transcript_name=HG002_chrY_T0000027;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000027:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	175668	176033	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG002_chrY_T0000027;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000027;transcript_name=HG002_chrY_T0000027;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000027:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	176034	176658	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG002_chrY_T0000027;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000027;transcript_name=HG002_chrY_T0000027;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000027:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	176659	180269	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG002_chrY_T0000027;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000027;transcript_name=HG002_chrY_T0000027;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000027:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	180270	180426	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG002_chrY_T0000027;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000027;transcript_name=HG002_chrY_T0000027;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000027:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	180427	180927	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG002_chrY_T0000027;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000027;transcript_name=HG002_chrY_T0000027;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000027:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	180928	181014	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG002_chrY_T0000027;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000027;transcript_name=HG002_chrY_T0000027;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000027:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	181015	181454	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG002_chrY_T0000027;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000027;transcript_name=HG002_chrY_T0000027;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000027:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	181455	181529	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG002_chrY_T0000027;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000027;transcript_name=HG002_chrY_T0000027;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000027:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	181530	181987	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG002_chrY_T0000027;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000027;transcript_name=HG002_chrY_T0000027;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000027:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	181988	182078	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG002_chrY_T0000027;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000027;transcript_name=HG002_chrY_T0000027;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000027:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	168969	182078	1000	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG002_chrY_T0000028;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_G0000007;transcript_name=HG002_chrY_T0000028;gene_name=PPP2R3B;ID=HG002_chrY_T0000028;Name=PPP2R3B
HG002_chrY	CAT	exon	168969	173440	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG002_chrY_T0000028;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000028;transcript_name=HG002_chrY_T0000028;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000028:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	173441	173507	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG002_chrY_T0000028;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000028;transcript_name=HG002_chrY_T0000028;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000028:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	173508	173626	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG002_chrY_T0000028;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000028;transcript_name=HG002_chrY_T0000028;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000028:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	173627	175491	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG002_chrY_T0000028;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000028;transcript_name=HG002_chrY_T0000028;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000028:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	175492	175667	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG002_chrY_T0000028;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000028;transcript_name=HG002_chrY_T0000028;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000028:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	175668	176033	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG002_chrY_T0000028;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000028;transcript_name=HG002_chrY_T0000028;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000028:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	176034	176658	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG002_chrY_T0000028;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000028;transcript_name=HG002_chrY_T0000028;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000028:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	176659	180269	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG002_chrY_T0000028;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000028;transcript_name=HG002_chrY_T0000028;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000028:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	180270	180426	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG002_chrY_T0000028;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000028;transcript_name=HG002_chrY_T0000028;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000028:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	180427	180927	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG002_chrY_T0000028;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000028;transcript_name=HG002_chrY_T0000028;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000028:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	180928	181014	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG002_chrY_T0000028;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000028;transcript_name=HG002_chrY_T0000028;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000028:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	181015	181454	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG002_chrY_T0000028;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000028;transcript_name=HG002_chrY_T0000028;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000028:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	181455	181529	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG002_chrY_T0000028;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000028;transcript_name=HG002_chrY_T0000028;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000028:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	181530	181987	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG002_chrY_T0000028;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000028;transcript_name=HG002_chrY_T0000028;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000028:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	181988	182078	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG002_chrY_T0000028;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000028;transcript_name=HG002_chrY_T0000028;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000028:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	173343	180383	1000	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=HG002_chrY_T0000029;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_G0000007;transcript_name=HG002_chrY_T0000029;gene_name=PPP2R3B;ID=HG002_chrY_T0000029;Name=PPP2R3B
HG002_chrY	CAT	exon	173343	173626	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=HG002_chrY_T0000029;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000029;transcript_name=HG002_chrY_T0000029;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000029:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	173627	175491	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=HG002_chrY_T0000029;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000029;transcript_name=HG002_chrY_T0000029;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000029:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	175492	175667	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=HG002_chrY_T0000029;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000029;transcript_name=HG002_chrY_T0000029;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000029:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	175668	176033	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=HG002_chrY_T0000029;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000029;transcript_name=HG002_chrY_T0000029;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000029:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	176034	176123	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=HG002_chrY_T0000029;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000029;transcript_name=HG002_chrY_T0000029;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000029:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	176124	176609	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=HG002_chrY_T0000029;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000029;transcript_name=HG002_chrY_T0000029;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000029:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	176610	176658	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=HG002_chrY_T0000029;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000029;transcript_name=HG002_chrY_T0000029;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000029:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	176659	180269	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=HG002_chrY_T0000029;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000029;transcript_name=HG002_chrY_T0000029;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000029:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	180270	180383	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=HG002_chrY_T0000029;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000029;transcript_name=HG002_chrY_T0000029;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000029:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	175492	180380	1000	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=HG002_chrY_T0000030;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_G0000007;transcript_name=HG002_chrY_T0000030;gene_name=PPP2R3B;ID=HG002_chrY_T0000030;Name=PPP2R3B
HG002_chrY	CAT	exon	175492	175667	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=HG002_chrY_T0000030;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000030;transcript_name=HG002_chrY_T0000030;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000030:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	175668	176033	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=HG002_chrY_T0000030;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000030;transcript_name=HG002_chrY_T0000030;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000030:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	176034	176123	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=HG002_chrY_T0000030;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000030;transcript_name=HG002_chrY_T0000030;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000030:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	176124	176609	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=HG002_chrY_T0000030;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000030;transcript_name=HG002_chrY_T0000030;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000030:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	176610	176964	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=HG002_chrY_T0000030;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000030;transcript_name=HG002_chrY_T0000030;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000030:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	176965	180269	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=HG002_chrY_T0000030;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000030;transcript_name=HG002_chrY_T0000030;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000030:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	180270	180380	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=HG002_chrY_T0000030;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000030;transcript_name=HG002_chrY_T0000030;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000030:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	176638	181268	1000	-	.	source_transcript=ENST00000711127.1;source_transcript_name=PPP2R3B-239;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711127.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711127.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711127.1,ENST00000711127.1;transcript_id=HG002_chrY_T0000031;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_G0000007;transcript_name=HG002_chrY_T0000031;gene_name=PPP2R3B;ID=HG002_chrY_T0000031;Name=PPP2R3B
HG002_chrY	CAT	exon	176638	176658	.	-	.	source_transcript=ENST00000711127.1;source_transcript_name=PPP2R3B-239;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711127.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711127.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711127.1,ENST00000711127.1;transcript_id=HG002_chrY_T0000031;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000031;transcript_name=HG002_chrY_T0000031;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000031:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	176659	180269	.	-	.	source_transcript=ENST00000711127.1;source_transcript_name=PPP2R3B-239;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711127.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711127.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711127.1,ENST00000711127.1;transcript_id=HG002_chrY_T0000031;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000031;transcript_name=HG002_chrY_T0000031;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000031:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	180270	180426	.	-	.	source_transcript=ENST00000711127.1;source_transcript_name=PPP2R3B-239;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711127.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711127.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711127.1,ENST00000711127.1;transcript_id=HG002_chrY_T0000031;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000031;transcript_name=HG002_chrY_T0000031;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000031:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	180427	180927	.	-	.	source_transcript=ENST00000711127.1;source_transcript_name=PPP2R3B-239;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711127.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711127.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711127.1,ENST00000711127.1;transcript_id=HG002_chrY_T0000031;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000031;transcript_name=HG002_chrY_T0000031;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000031:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	180928	181268	.	-	.	source_transcript=ENST00000711127.1;source_transcript_name=PPP2R3B-239;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711127.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711127.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711127.1,ENST00000711127.1;transcript_id=HG002_chrY_T0000031;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000031;transcript_name=HG002_chrY_T0000031;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000031:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	179650	224952	1000	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.9;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG002_chrY_T0000032;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_G0000007;transcript_name=HG002_chrY_T0000032;gene_name=PPP2R3B;ID=HG002_chrY_T0000032;Name=PPP2R3B
HG002_chrY	CAT	exon	179650	180426	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.9;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG002_chrY_T0000032;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000032;transcript_name=HG002_chrY_T0000032;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000032:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	180427	180927	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.9;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG002_chrY_T0000032;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000032;transcript_name=HG002_chrY_T0000032;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000032:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	180928	181014	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.9;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG002_chrY_T0000032;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000032;transcript_name=HG002_chrY_T0000032;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000032:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	181015	181454	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.9;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG002_chrY_T0000032;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000032;transcript_name=HG002_chrY_T0000032;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000032:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	181455	181529	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.9;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG002_chrY_T0000032;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000032;transcript_name=HG002_chrY_T0000032;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000032:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	181530	181987	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.9;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG002_chrY_T0000032;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000032;transcript_name=HG002_chrY_T0000032;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000032:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	181988	182090	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.9;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG002_chrY_T0000032;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000032;transcript_name=HG002_chrY_T0000032;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000032:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	182091	182343	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.9;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG002_chrY_T0000032;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000032;transcript_name=HG002_chrY_T0000032;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000032:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	182344	182447	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.9;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG002_chrY_T0000032;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000032;transcript_name=HG002_chrY_T0000032;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000032:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	182448	196436	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.9;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG002_chrY_T0000032;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000032;transcript_name=HG002_chrY_T0000032;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000032:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	196437	196622	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.9;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG002_chrY_T0000032;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000032;transcript_name=HG002_chrY_T0000032;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000032:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	196623	197286	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.9;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG002_chrY_T0000032;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000032;transcript_name=HG002_chrY_T0000032;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000032:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	197287	197364	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.9;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG002_chrY_T0000032;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000032;transcript_name=HG002_chrY_T0000032;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000032:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	197365	224364	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.9;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG002_chrY_T0000032;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000032;transcript_name=HG002_chrY_T0000032;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000032:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	224365	224952	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.9;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG002_chrY_T0000032;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000032;transcript_name=HG002_chrY_T0000032;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000032:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	181391	196548	1000	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.78200000000004;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=HG002_chrY_T0000033;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_G0000007;transcript_name=HG002_chrY_T0000033;gene_name=PPP2R3B;ID=HG002_chrY_T0000033;Name=PPP2R3B
HG002_chrY	CAT	exon	181391	181529	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.78200000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=HG002_chrY_T0000033;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000033;transcript_name=HG002_chrY_T0000033;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000033:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	181530	181987	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.78200000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=HG002_chrY_T0000033;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000033;transcript_name=HG002_chrY_T0000033;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000033:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	181988	182090	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.78200000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=HG002_chrY_T0000033;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000033;transcript_name=HG002_chrY_T0000033;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000033:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	182091	182343	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.78200000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=HG002_chrY_T0000033;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000033;transcript_name=HG002_chrY_T0000033;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000033:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	182344	182447	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.78200000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=HG002_chrY_T0000033;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000033;transcript_name=HG002_chrY_T0000033;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000033:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	182448	196436	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.78200000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=HG002_chrY_T0000033;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000033;transcript_name=HG002_chrY_T0000033;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000033:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	196437	196548	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.78200000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=HG002_chrY_T0000033;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000033;transcript_name=HG002_chrY_T0000033;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000033:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	181474	182592	1000	-	.	source_transcript=ENST00000711124.1;source_transcript_name=PPP2R3B-236;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711124.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711124.1,ENST00000711124.1;transcript_id=HG002_chrY_T0000034;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_G0000007;transcript_name=HG002_chrY_T0000034;gene_name=PPP2R3B;ID=HG002_chrY_T0000034;Name=PPP2R3B
HG002_chrY	CAT	exon	181474	181529	.	-	.	source_transcript=ENST00000711124.1;source_transcript_name=PPP2R3B-236;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711124.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711124.1,ENST00000711124.1;transcript_id=HG002_chrY_T0000034;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000034;transcript_name=HG002_chrY_T0000034;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000034:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	181530	181987	.	-	.	source_transcript=ENST00000711124.1;source_transcript_name=PPP2R3B-236;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711124.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711124.1,ENST00000711124.1;transcript_id=HG002_chrY_T0000034;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000034;transcript_name=HG002_chrY_T0000034;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000034:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	181988	182090	.	-	.	source_transcript=ENST00000711124.1;source_transcript_name=PPP2R3B-236;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711124.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711124.1,ENST00000711124.1;transcript_id=HG002_chrY_T0000034;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000034;transcript_name=HG002_chrY_T0000034;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000034:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	182091	182343	.	-	.	source_transcript=ENST00000711124.1;source_transcript_name=PPP2R3B-236;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711124.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711124.1,ENST00000711124.1;transcript_id=HG002_chrY_T0000034;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000034;transcript_name=HG002_chrY_T0000034;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000034:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	182344	182592	.	-	.	source_transcript=ENST00000711124.1;source_transcript_name=PPP2R3B-236;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711124.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711124.1,ENST00000711124.1;transcript_id=HG002_chrY_T0000034;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000034;transcript_name=HG002_chrY_T0000034;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000034:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	182365	211983	100	-	.	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=HG002_chrY_T0000035;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_G0000007;transcript_name=HG002_chrY_T0000035;gene_name=PPP2R3B;ID=HG002_chrY_T0000035;Name=PPP2R3B
HG002_chrY	CAT	exon	182365	182447	.	-	.	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=HG002_chrY_T0000035;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000035;transcript_name=HG002_chrY_T0000035;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000035:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	182365	182447	.	-	0	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=HG002_chrY_T0000035;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000035;transcript_name=HG002_chrY_T0000035;gene_name=PPP2R3B;ID=CDS:HG002_chrY_T0000035:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	182448	196436	.	-	.	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=HG002_chrY_T0000035;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000035;transcript_name=HG002_chrY_T0000035;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000035:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	196437	196622	.	-	.	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=HG002_chrY_T0000035;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000035;transcript_name=HG002_chrY_T0000035;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000035:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	196437	196622	.	-	0	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=HG002_chrY_T0000035;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000035;transcript_name=HG002_chrY_T0000035;gene_name=PPP2R3B;ID=CDS:HG002_chrY_T0000035:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	196623	211470	.	-	.	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=HG002_chrY_T0000035;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000035;transcript_name=HG002_chrY_T0000035;gene_name=PPP2R3B;ID=intron:HG002_chrY_T0000035:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	211471	211983	.	-	.	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=HG002_chrY_T0000035;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000035;transcript_name=HG002_chrY_T0000035;gene_name=PPP2R3B;ID=exon:HG002_chrY_T0000035:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	211471	211710	.	-	0	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=HG002_chrY_T0000035;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000035;transcript_name=HG002_chrY_T0000035;gene_name=PPP2R3B;ID=CDS:HG002_chrY_T0000035:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	211708	211710	.	-	0	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=HG002_chrY_T0000035;gene_id=HG002_chrY_G0000007;Parent=HG002_chrY_T0000035;transcript_name=HG002_chrY_T0000035;gene_name=PPP2R3B;ID=start_codon:HG002_chrY_T0000035;Name=PPP2R3B;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	224959	360872	.	+	.	source_gene_common_name=ENSG00000292349;source_gene=ENSG00000292349.2;alternative_source_transcripts=ENST00000850672.1,ENST00000850672.1;gene_id=HG002_chrY_G0000008;gene_biotype=lncRNA;gene_name=ENSG00000292349;gene_sources=liftoff;ID=HG002_chrY_G0000008;Name=ENSG00000292349
HG002_chrY	CAT	transcript	224959	260087	1000	+	.	source_transcript=ENST00000850672.1;source_transcript_name=ENST00000850672;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850672.1;transcript_score=299.527;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850672.1,ENST00000850672.1;transcript_id=HG002_chrY_T0000036;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_G0000008;transcript_name=HG002_chrY_T0000036;gene_name=ENSG00000292349;ID=HG002_chrY_T0000036;Name=ENSG00000292349
HG002_chrY	CAT	exon	224959	225069	.	+	.	source_transcript=ENST00000850672.1;source_transcript_name=ENST00000850672;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850672.1;transcript_score=299.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850672.1,ENST00000850672.1;transcript_id=HG002_chrY_T0000036;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000036;transcript_name=HG002_chrY_T0000036;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000036:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	225070	259775	.	+	.	source_transcript=ENST00000850672.1;source_transcript_name=ENST00000850672;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850672.1;transcript_score=299.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850672.1,ENST00000850672.1;transcript_id=HG002_chrY_T0000036;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000036;transcript_name=HG002_chrY_T0000036;gene_name=ENSG00000292349;ID=intron:HG002_chrY_T0000036:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	259776	260087	.	+	.	source_transcript=ENST00000850672.1;source_transcript_name=ENST00000850672;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850672.1;transcript_score=299.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850672.1,ENST00000850672.1;transcript_id=HG002_chrY_T0000036;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000036;transcript_name=HG002_chrY_T0000036;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000036:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	224963	260082	1000	+	.	source_transcript=ENST00000850673.1;source_transcript_name=ENST00000850673;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850673.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850673.1;transcript_score=299.779;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850673.1,ENST00000850673.1;transcript_id=HG002_chrY_T0000037;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_G0000008;transcript_name=HG002_chrY_T0000037;gene_name=ENSG00000292349;ID=HG002_chrY_T0000037;Name=ENSG00000292349
HG002_chrY	CAT	exon	224963	225069	.	+	.	source_transcript=ENST00000850673.1;source_transcript_name=ENST00000850673;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850673.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850673.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850673.1,ENST00000850673.1;transcript_id=HG002_chrY_T0000037;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000037;transcript_name=HG002_chrY_T0000037;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000037:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	225070	257058	.	+	.	source_transcript=ENST00000850673.1;source_transcript_name=ENST00000850673;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850673.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850673.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850673.1,ENST00000850673.1;transcript_id=HG002_chrY_T0000037;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000037;transcript_name=HG002_chrY_T0000037;gene_name=ENSG00000292349;ID=intron:HG002_chrY_T0000037:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	257059	257547	.	+	.	source_transcript=ENST00000850673.1;source_transcript_name=ENST00000850673;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850673.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850673.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850673.1,ENST00000850673.1;transcript_id=HG002_chrY_T0000037;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000037;transcript_name=HG002_chrY_T0000037;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000037:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	257548	259775	.	+	.	source_transcript=ENST00000850673.1;source_transcript_name=ENST00000850673;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850673.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850673.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850673.1,ENST00000850673.1;transcript_id=HG002_chrY_T0000037;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000037;transcript_name=HG002_chrY_T0000037;gene_name=ENSG00000292349;ID=intron:HG002_chrY_T0000037:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	259776	260082	.	+	.	source_transcript=ENST00000850673.1;source_transcript_name=ENST00000850673;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850673.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850673.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850673.1,ENST00000850673.1;transcript_id=HG002_chrY_T0000037;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000037;transcript_name=HG002_chrY_T0000037;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000037:2;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	224977	244438	1000	+	.	source_transcript=ENST00000850833.1;source_transcript_name=ENST00000850833;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850833.1;transcript_score=299.926;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850833.1,ENST00000850833.1;transcript_id=HG002_chrY_T0000038;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_G0000008;transcript_name=HG002_chrY_T0000038;gene_name=ENSG00000292349;ID=HG002_chrY_T0000038;Name=ENSG00000292349
HG002_chrY	CAT	exon	224977	225287	.	+	.	source_transcript=ENST00000850833.1;source_transcript_name=ENST00000850833;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850833.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850833.1,ENST00000850833.1;transcript_id=HG002_chrY_T0000038;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000038;transcript_name=HG002_chrY_T0000038;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000038:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	225288	243393	.	+	.	source_transcript=ENST00000850833.1;source_transcript_name=ENST00000850833;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850833.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850833.1,ENST00000850833.1;transcript_id=HG002_chrY_T0000038;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000038;transcript_name=HG002_chrY_T0000038;gene_name=ENSG00000292349;ID=intron:HG002_chrY_T0000038:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	243394	244438	.	+	.	source_transcript=ENST00000850833.1;source_transcript_name=ENST00000850833;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850833.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850833.1,ENST00000850833.1;transcript_id=HG002_chrY_T0000038;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000038;transcript_name=HG002_chrY_T0000038;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000038:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	224980	315398	1000	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=HG002_chrY_T0000039;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_G0000008;transcript_name=HG002_chrY_T0000039;gene_name=ENSG00000292349;ID=HG002_chrY_T0000039;Name=ENSG00000292349
HG002_chrY	CAT	exon	224980	225287	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=HG002_chrY_T0000039;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000039;transcript_name=HG002_chrY_T0000039;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000039:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	225288	302512	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=HG002_chrY_T0000039;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000039;transcript_name=HG002_chrY_T0000039;gene_name=ENSG00000292349;ID=intron:HG002_chrY_T0000039:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	302513	303125	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=HG002_chrY_T0000039;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000039;transcript_name=HG002_chrY_T0000039;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000039:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	303126	312790	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=HG002_chrY_T0000039;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000039;transcript_name=HG002_chrY_T0000039;gene_name=ENSG00000292349;ID=intron:HG002_chrY_T0000039:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	312791	312911	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=HG002_chrY_T0000039;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000039;transcript_name=HG002_chrY_T0000039;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000039:2;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	312912	313963	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=HG002_chrY_T0000039;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000039;transcript_name=HG002_chrY_T0000039;gene_name=ENSG00000292349;ID=intron:HG002_chrY_T0000039:2;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	313964	314162	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=HG002_chrY_T0000039;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000039;transcript_name=HG002_chrY_T0000039;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000039:3;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	314163	314768	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=HG002_chrY_T0000039;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000039;transcript_name=HG002_chrY_T0000039;gene_name=ENSG00000292349;ID=intron:HG002_chrY_T0000039:3;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	314769	315398	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=HG002_chrY_T0000039;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000039;transcript_name=HG002_chrY_T0000039;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000039:4;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	225032	360872	1000	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG002_chrY_T0000040;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_G0000008;transcript_name=HG002_chrY_T0000040;gene_name=ENSG00000292349;ID=HG002_chrY_T0000040;Name=ENSG00000292349
HG002_chrY	CAT	exon	225032	225287	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG002_chrY_T0000040;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000040;transcript_name=HG002_chrY_T0000040;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000040:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	225288	278012	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG002_chrY_T0000040;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000040;transcript_name=HG002_chrY_T0000040;gene_name=ENSG00000292349;ID=intron:HG002_chrY_T0000040:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	278013	278127	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG002_chrY_T0000040;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000040;transcript_name=HG002_chrY_T0000040;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000040:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	278128	279663	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG002_chrY_T0000040;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000040;transcript_name=HG002_chrY_T0000040;gene_name=ENSG00000292349;ID=intron:HG002_chrY_T0000040:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	279664	279830	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG002_chrY_T0000040;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000040;transcript_name=HG002_chrY_T0000040;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000040:2;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	279831	302512	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG002_chrY_T0000040;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000040;transcript_name=HG002_chrY_T0000040;gene_name=ENSG00000292349;ID=intron:HG002_chrY_T0000040:2;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	302513	303125	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG002_chrY_T0000040;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000040;transcript_name=HG002_chrY_T0000040;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000040:3;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	303126	332436	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG002_chrY_T0000040;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000040;transcript_name=HG002_chrY_T0000040;gene_name=ENSG00000292349;ID=intron:HG002_chrY_T0000040:3;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	332437	332577	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG002_chrY_T0000040;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000040;transcript_name=HG002_chrY_T0000040;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000040:4;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	332578	338980	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG002_chrY_T0000040;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000040;transcript_name=HG002_chrY_T0000040;gene_name=ENSG00000292349;ID=intron:HG002_chrY_T0000040:4;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	338981	339096	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG002_chrY_T0000040;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000040;transcript_name=HG002_chrY_T0000040;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000040:5;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	339097	345040	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG002_chrY_T0000040;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000040;transcript_name=HG002_chrY_T0000040;gene_name=ENSG00000292349;ID=intron:HG002_chrY_T0000040:5;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	345041	345114	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG002_chrY_T0000040;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000040;transcript_name=HG002_chrY_T0000040;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000040:6;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	345115	359809	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG002_chrY_T0000040;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000040;transcript_name=HG002_chrY_T0000040;gene_name=ENSG00000292349;ID=intron:HG002_chrY_T0000040:6;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	359810	360872	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG002_chrY_T0000040;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000040;transcript_name=HG002_chrY_T0000040;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000040:7;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	243679	256817	1000	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=299.935;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=HG002_chrY_T0000042;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_G0000008;transcript_name=HG002_chrY_T0000042;gene_name=ENSG00000292349;ID=HG002_chrY_T0000042;Name=ENSG00000292349
HG002_chrY	CAT	exon	243679	244311	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=299.935;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=HG002_chrY_T0000042;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000042;transcript_name=HG002_chrY_T0000042;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000042:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	244312	247206	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=299.935;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=HG002_chrY_T0000042;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000042;transcript_name=HG002_chrY_T0000042;gene_name=ENSG00000292349;ID=intron:HG002_chrY_T0000042:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	247207	247453	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=299.935;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=HG002_chrY_T0000042;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000042;transcript_name=HG002_chrY_T0000042;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000042:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	247454	254415	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=299.935;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=HG002_chrY_T0000042;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000042;transcript_name=HG002_chrY_T0000042;gene_name=ENSG00000292349;ID=intron:HG002_chrY_T0000042:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	254416	254704	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=299.935;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=HG002_chrY_T0000042;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000042;transcript_name=HG002_chrY_T0000042;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000042:2;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	254705	256443	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=299.935;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=HG002_chrY_T0000042;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000042;transcript_name=HG002_chrY_T0000042;gene_name=ENSG00000292349;ID=intron:HG002_chrY_T0000042:2;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	256444	256817	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=299.935;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=HG002_chrY_T0000042;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000042;transcript_name=HG002_chrY_T0000042;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000042:3;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	243935	313088	1000	+	.	source_transcript=ENST00000850677.1;source_transcript_name=ENST00000850677;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850677.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850677.1,ENST00000850677.1;transcript_id=HG002_chrY_T0000043;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_G0000008;transcript_name=HG002_chrY_T0000043;gene_name=ENSG00000292349;ID=HG002_chrY_T0000043;Name=ENSG00000292349
HG002_chrY	CAT	exon	243935	244282	.	+	.	source_transcript=ENST00000850677.1;source_transcript_name=ENST00000850677;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850677.1,ENST00000850677.1;transcript_id=HG002_chrY_T0000043;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000043;transcript_name=HG002_chrY_T0000043;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000043:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	244283	302512	.	+	.	source_transcript=ENST00000850677.1;source_transcript_name=ENST00000850677;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850677.1,ENST00000850677.1;transcript_id=HG002_chrY_T0000043;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000043;transcript_name=HG002_chrY_T0000043;gene_name=ENSG00000292349;ID=intron:HG002_chrY_T0000043:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	302513	303125	.	+	.	source_transcript=ENST00000850677.1;source_transcript_name=ENST00000850677;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850677.1,ENST00000850677.1;transcript_id=HG002_chrY_T0000043;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000043;transcript_name=HG002_chrY_T0000043;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000043:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	303126	312790	.	+	.	source_transcript=ENST00000850677.1;source_transcript_name=ENST00000850677;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850677.1,ENST00000850677.1;transcript_id=HG002_chrY_T0000043;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000043;transcript_name=HG002_chrY_T0000043;gene_name=ENSG00000292349;ID=intron:HG002_chrY_T0000043:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	312791	313088	.	+	.	source_transcript=ENST00000850677.1;source_transcript_name=ENST00000850677;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850677.1,ENST00000850677.1;transcript_id=HG002_chrY_T0000043;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000043;transcript_name=HG002_chrY_T0000043;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000043:2;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	252761	254735	1000	+	.	source_transcript=ENST00000850678.1;source_transcript_name=ENST00000850678;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850678.1;transcript_score=299.086;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850678.1,ENST00000850678.1;transcript_id=HG002_chrY_T0000044;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_G0000008;transcript_name=HG002_chrY_T0000044;gene_name=ENSG00000292349;ID=HG002_chrY_T0000044;Name=ENSG00000292349
HG002_chrY	CAT	exon	252761	253206	.	+	.	source_transcript=ENST00000850678.1;source_transcript_name=ENST00000850678;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850678.1;transcript_score=299.086;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850678.1,ENST00000850678.1;transcript_id=HG002_chrY_T0000044;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000044;transcript_name=HG002_chrY_T0000044;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000044:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	253207	254415	.	+	.	source_transcript=ENST00000850678.1;source_transcript_name=ENST00000850678;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850678.1;transcript_score=299.086;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850678.1,ENST00000850678.1;transcript_id=HG002_chrY_T0000044;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000044;transcript_name=HG002_chrY_T0000044;gene_name=ENSG00000292349;ID=intron:HG002_chrY_T0000044:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	254416	254735	.	+	.	source_transcript=ENST00000850678.1;source_transcript_name=ENST00000850678;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850678.1;transcript_score=299.086;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850678.1,ENST00000850678.1;transcript_id=HG002_chrY_T0000044;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000044;transcript_name=HG002_chrY_T0000044;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000044:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	254415	260087	1000	+	.	source_transcript=ENST00000850679.1;source_transcript_name=ENST00000850679;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850679.1;transcript_score=299.8;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850679.1,ENST00000850679.1;transcript_id=HG002_chrY_T0000045;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_G0000008;transcript_name=HG002_chrY_T0000045;gene_name=ENSG00000292349;ID=HG002_chrY_T0000045;Name=ENSG00000292349
HG002_chrY	CAT	exon	254415	254478	.	+	.	source_transcript=ENST00000850679.1;source_transcript_name=ENST00000850679;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850679.1;transcript_score=299.8;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850679.1,ENST00000850679.1;transcript_id=HG002_chrY_T0000045;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000045;transcript_name=HG002_chrY_T0000045;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000045:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	254479	256923	.	+	.	source_transcript=ENST00000850679.1;source_transcript_name=ENST00000850679;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850679.1;transcript_score=299.8;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850679.1,ENST00000850679.1;transcript_id=HG002_chrY_T0000045;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000045;transcript_name=HG002_chrY_T0000045;gene_name=ENSG00000292349;ID=intron:HG002_chrY_T0000045:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	256924	257547	.	+	.	source_transcript=ENST00000850679.1;source_transcript_name=ENST00000850679;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850679.1;transcript_score=299.8;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850679.1,ENST00000850679.1;transcript_id=HG002_chrY_T0000045;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000045;transcript_name=HG002_chrY_T0000045;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000045:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	257548	259775	.	+	.	source_transcript=ENST00000850679.1;source_transcript_name=ENST00000850679;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850679.1;transcript_score=299.8;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850679.1,ENST00000850679.1;transcript_id=HG002_chrY_T0000045;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000045;transcript_name=HG002_chrY_T0000045;gene_name=ENSG00000292349;ID=intron:HG002_chrY_T0000045:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	259776	260087	.	+	.	source_transcript=ENST00000850679.1;source_transcript_name=ENST00000850679;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850679.1;transcript_score=299.8;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850679.1,ENST00000850679.1;transcript_id=HG002_chrY_T0000045;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000045;transcript_name=HG002_chrY_T0000045;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000045:2;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	257283	260084	1000	+	.	source_transcript=ENST00000850832.1;source_transcript_name=ENST00000850832;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850832.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850832.1;transcript_score=299.61199999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850832.1,ENST00000850832.1;transcript_id=HG002_chrY_T0000046;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_G0000008;transcript_name=HG002_chrY_T0000046;gene_name=ENSG00000292349;ID=HG002_chrY_T0000046;Name=ENSG00000292349
HG002_chrY	CAT	exon	257283	257488	.	+	.	source_transcript=ENST00000850832.1;source_transcript_name=ENST00000850832;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850832.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850832.1;transcript_score=299.61199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850832.1,ENST00000850832.1;transcript_id=HG002_chrY_T0000046;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000046;transcript_name=HG002_chrY_T0000046;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000046:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	257489	259775	.	+	.	source_transcript=ENST00000850832.1;source_transcript_name=ENST00000850832;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850832.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850832.1;transcript_score=299.61199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850832.1,ENST00000850832.1;transcript_id=HG002_chrY_T0000046;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000046;transcript_name=HG002_chrY_T0000046;gene_name=ENSG00000292349;ID=intron:HG002_chrY_T0000046:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	259776	260084	.	+	.	source_transcript=ENST00000850832.1;source_transcript_name=ENST00000850832;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850832.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850832.1;transcript_score=299.61199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850832.1,ENST00000850832.1;transcript_id=HG002_chrY_T0000046;gene_id=HG002_chrY_G0000008;Parent=HG002_chrY_T0000046;transcript_name=HG002_chrY_T0000046;gene_name=ENSG00000292349;ID=exon:HG002_chrY_T0000046:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	226097	226386	.	-	.	source_gene_common_name=Metazoa_SRP;source_gene=ENSG00000292350.1;alternative_source_transcripts=ENST00000711149.1,ENST00000711149.1;gene_id=HG002_chrY_G0000009;gene_biotype=misc_RNA;gene_name=Metazoa_SRP;gene_sources=liftoff;ID=HG002_chrY_G0000009;Name=Metazoa_SRP
HG002_chrY	CAT	transcript	226097	226386	1000	-	.	source_transcript=ENST00000711149.1;source_transcript_name=Metazoa_SRP.216-201;source_gene=ENSG00000292350.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000292350.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000711149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711149.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=Metazoa_SRP;alternative_source_transcripts=ENST00000711149.1,ENST00000711149.1;transcript_id=HG002_chrY_T0000041;gene_id=HG002_chrY_G0000009;Parent=HG002_chrY_G0000009;transcript_name=HG002_chrY_T0000041;gene_name=Metazoa_SRP;ID=HG002_chrY_T0000041;Name=Metazoa_SRP
HG002_chrY	CAT	exon	226097	226386	.	-	.	source_transcript=ENST00000711149.1;source_transcript_name=Metazoa_SRP.216-201;source_gene=ENSG00000292350.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000292350.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000711149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711149.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=Metazoa_SRP;alternative_source_transcripts=ENST00000711149.1,ENST00000711149.1;transcript_id=HG002_chrY_T0000041;gene_id=HG002_chrY_G0000009;Parent=HG002_chrY_T0000041;transcript_name=HG002_chrY_T0000041;gene_name=Metazoa_SRP;ID=exon:HG002_chrY_T0000041:0;Name=Metazoa_SRP;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	371758	372085	.	-	.	source_gene_common_name=FABP5P13;source_gene=ENSG00000292352.1;alternative_source_transcripts=ENST00000711147.1,ENST00000711147.1;gene_id=HG002_chrY_G0000010;gene_biotype=processed_pseudogene;gene_name=FABP5P13;gene_sources=liftoff;ID=HG002_chrY_G0000010;Name=FABP5P13
HG002_chrY	CAT	transcript	371758	372085	1000	-	.	source_transcript=ENST00000711147.1;source_transcript_name=FABP5P13-204;source_gene=ENSG00000292352.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292352.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711147.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711147.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FABP5P13;alternative_source_transcripts=ENST00000711147.1,ENST00000711147.1;transcript_id=HG002_chrY_T0000047;gene_id=HG002_chrY_G0000010;Parent=HG002_chrY_G0000010;transcript_name=HG002_chrY_T0000047;gene_name=FABP5P13;ID=HG002_chrY_T0000047;Name=FABP5P13
HG002_chrY	CAT	exon	371758	372085	.	-	.	source_transcript=ENST00000711147.1;source_transcript_name=FABP5P13-204;source_gene=ENSG00000292352.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292352.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711147.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711147.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FABP5P13;alternative_source_transcripts=ENST00000711147.1,ENST00000711147.1;transcript_id=HG002_chrY_T0000047;gene_id=HG002_chrY_G0000010;Parent=HG002_chrY_T0000047;transcript_name=HG002_chrY_T0000047;gene_name=FABP5P13;ID=exon:HG002_chrY_T0000047:0;Name=FABP5P13;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	397981	398097	.	-	.	source_gene_common_name=KRT18P53;source_gene=ENSG00000292353.1;alternative_source_transcripts=ENST00000711146.1,ENST00000711146.1;gene_id=HG002_chrY_G0000011;gene_biotype=processed_pseudogene;gene_name=KRT18P53;gene_sources=liftoff;ID=HG002_chrY_G0000011;Name=KRT18P53
HG002_chrY	CAT	transcript	397981	398097	1000	-	.	source_transcript=ENST00000711146.1;source_transcript_name=KRT18P53-204;source_gene=ENSG00000292353.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292353.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711146.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711146.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KRT18P53;alternative_source_transcripts=ENST00000711146.1,ENST00000711146.1;transcript_id=HG002_chrY_T0000048;gene_id=HG002_chrY_G0000011;Parent=HG002_chrY_G0000011;transcript_name=HG002_chrY_T0000048;gene_name=KRT18P53;ID=HG002_chrY_T0000048;Name=KRT18P53
HG002_chrY	CAT	exon	397981	398097	.	-	.	source_transcript=ENST00000711146.1;source_transcript_name=KRT18P53-204;source_gene=ENSG00000292353.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292353.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711146.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711146.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KRT18P53;alternative_source_transcripts=ENST00000711146.1,ENST00000711146.1;transcript_id=HG002_chrY_T0000048;gene_id=HG002_chrY_G0000011;Parent=HG002_chrY_T0000048;transcript_name=HG002_chrY_T0000048;gene_name=KRT18P53;ID=exon:HG002_chrY_T0000048:0;Name=KRT18P53;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	454406	455218	.	+	.	source_gene_common_name=ENSG00000310543;source_gene=ENSG00000310543.1;alternative_source_transcripts=ENST00000850702.1,ENST00000850702.1;gene_id=HG002_chrY_G0000012;gene_biotype=lncRNA;gene_name=ENSG00000310543;gene_sources=liftoff,transMap;ID=HG002_chrY_G0000012;Name=ENSG00000310543
HG002_chrY	CAT	transcript	454406	455218	1000	+	.	source_transcript=ENST00000850702.1;source_transcript_name=ENST00000850702;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850702.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850702.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850702.1,ENST00000850702.1;transcript_id=HG002_chrY_T0000049;gene_id=HG002_chrY_G0000012;Parent=HG002_chrY_G0000012;transcript_name=HG002_chrY_T0000049;gene_name=ENSG00000310543;ID=HG002_chrY_T0000049;Name=ENSG00000310543
HG002_chrY	CAT	exon	454406	454801	.	+	.	source_transcript=ENST00000850702.1;source_transcript_name=ENST00000850702;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850702.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850702.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850702.1,ENST00000850702.1;transcript_id=HG002_chrY_T0000049;gene_id=HG002_chrY_G0000012;Parent=HG002_chrY_T0000049;transcript_name=HG002_chrY_T0000049;gene_name=ENSG00000310543;ID=exon:HG002_chrY_T0000049:0;Name=ENSG00000310543;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	454802	454977	.	+	.	source_transcript=ENST00000850702.1;source_transcript_name=ENST00000850702;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850702.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850702.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850702.1,ENST00000850702.1;transcript_id=HG002_chrY_T0000049;gene_id=HG002_chrY_G0000012;Parent=HG002_chrY_T0000049;transcript_name=HG002_chrY_T0000049;gene_name=ENSG00000310543;ID=intron:HG002_chrY_T0000049:0;Name=ENSG00000310543;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	454978	455218	.	+	.	source_transcript=ENST00000850702.1;source_transcript_name=ENST00000850702;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850702.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850702.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850702.1,ENST00000850702.1;transcript_id=HG002_chrY_T0000049;gene_id=HG002_chrY_G0000012;Parent=HG002_chrY_T0000049;transcript_name=HG002_chrY_T0000049;gene_name=ENSG00000310543;ID=exon:HG002_chrY_T0000049:1;Name=ENSG00000310543;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	454496	455218	1000	+	.	source_transcript=ENST00000850703.1;source_transcript_name=ENST00000850703;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850703.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850703.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850703.1;transcript_id=HG002_chrY_T0000050;gene_id=HG002_chrY_G0000012;Parent=HG002_chrY_G0000012;transcript_name=HG002_chrY_T0000050;gene_name=ENSG00000310543;ID=HG002_chrY_T0000050;Name=ENSG00000310543
HG002_chrY	CAT	exon	454496	455218	.	+	.	source_transcript=ENST00000850703.1;source_transcript_name=ENST00000850703;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850703.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850703.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850703.1;transcript_id=HG002_chrY_T0000050;gene_id=HG002_chrY_G0000012;Parent=HG002_chrY_T0000050;transcript_name=HG002_chrY_T0000050;gene_name=ENSG00000310543;ID=exon:HG002_chrY_T0000050:0;Name=ENSG00000310543;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	454496	455218	1000	+	.	source_transcript=ENST00000850703.1;source_transcript_name=ENST00000850703;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850703.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;transcript_id=HG002_chrY_T0000051;gene_id=HG002_chrY_G0000012;Parent=HG002_chrY_G0000012;transcript_name=HG002_chrY_T0000051;gene_name=ENSG00000310543;ID=HG002_chrY_T0000051;Name=ENSG00000310543
HG002_chrY	CAT	exon	454496	454801	.	+	.	source_transcript=ENST00000850703.1;source_transcript_name=ENST00000850703;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850703.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;transcript_id=HG002_chrY_T0000051;gene_id=HG002_chrY_G0000012;Parent=HG002_chrY_T0000051;transcript_name=HG002_chrY_T0000051;gene_name=ENSG00000310543;ID=exon:HG002_chrY_T0000051:0;Name=ENSG00000310543;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	454802	454874	.	+	.	source_transcript=ENST00000850703.1;source_transcript_name=ENST00000850703;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850703.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;transcript_id=HG002_chrY_T0000051;gene_id=HG002_chrY_G0000012;Parent=HG002_chrY_T0000051;transcript_name=HG002_chrY_T0000051;gene_name=ENSG00000310543;ID=intron:HG002_chrY_T0000051:0;Name=ENSG00000310543;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	454875	455218	.	+	.	source_transcript=ENST00000850703.1;source_transcript_name=ENST00000850703;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850703.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;transcript_id=HG002_chrY_T0000051;gene_id=HG002_chrY_G0000012;Parent=HG002_chrY_T0000051;transcript_name=HG002_chrY_T0000051;gene_name=ENSG00000310543;ID=exon:HG002_chrY_T0000051:1;Name=ENSG00000310543;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	454518	455218	1000	+	.	source_transcript=ENST00000850704.1;source_transcript_name=ENST00000850704;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850704.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850704.1,ENST00000850704.1;transcript_id=HG002_chrY_T0000052;gene_id=HG002_chrY_G0000012;Parent=HG002_chrY_G0000012;transcript_name=HG002_chrY_T0000052;gene_name=ENSG00000310543;ID=HG002_chrY_T0000052;Name=ENSG00000310543
HG002_chrY	CAT	exon	454518	454801	.	+	.	source_transcript=ENST00000850704.1;source_transcript_name=ENST00000850704;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850704.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850704.1,ENST00000850704.1;transcript_id=HG002_chrY_T0000052;gene_id=HG002_chrY_G0000012;Parent=HG002_chrY_T0000052;transcript_name=HG002_chrY_T0000052;gene_name=ENSG00000310543;ID=exon:HG002_chrY_T0000052:0;Name=ENSG00000310543;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	454802	454935	.	+	.	source_transcript=ENST00000850704.1;source_transcript_name=ENST00000850704;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850704.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850704.1,ENST00000850704.1;transcript_id=HG002_chrY_T0000052;gene_id=HG002_chrY_G0000012;Parent=HG002_chrY_T0000052;transcript_name=HG002_chrY_T0000052;gene_name=ENSG00000310543;ID=intron:HG002_chrY_T0000052:0;Name=ENSG00000310543;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	454936	455218	.	+	.	source_transcript=ENST00000850704.1;source_transcript_name=ENST00000850704;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850704.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850704.1,ENST00000850704.1;transcript_id=HG002_chrY_T0000052;gene_id=HG002_chrY_G0000012;Parent=HG002_chrY_T0000052;transcript_name=HG002_chrY_T0000052;gene_name=ENSG00000310543;ID=exon:HG002_chrY_T0000052:1;Name=ENSG00000310543;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	478098	512580	.	+	.	source_gene_common_name=SHOX;source_gene=ENSG00000292354.1;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;gene_id=HG002_chrY_G0000013;gene_biotype=protein_coding;gene_name=SHOX;gene_sources=liftoff,transMap;ID=HG002_chrY_G0000013;Name=SHOX
HG002_chrY	CAT	transcript	478098	512580	100	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG002_chrY_T0000053;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_G0000013;transcript_name=HG002_chrY_T0000053;gene_name=SHOX;ID=HG002_chrY_T0000053;Name=SHOX
HG002_chrY	CAT	exon	478098	478358	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG002_chrY_T0000053;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000053;transcript_name=HG002_chrY_T0000053;gene_name=SHOX;ID=exon:HG002_chrY_T0000053:0;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	478359	483863	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG002_chrY_T0000053;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000053;transcript_name=HG002_chrY_T0000053;gene_name=SHOX;ID=intron:HG002_chrY_T0000053:0;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	483864	484572	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG002_chrY_T0000053;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000053;transcript_name=HG002_chrY_T0000053;gene_name=SHOX;ID=exon:HG002_chrY_T0000053:1;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	484296	484572	.	+	0	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG002_chrY_T0000053;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000053;transcript_name=HG002_chrY_T0000053;gene_name=SHOX;ID=CDS:HG002_chrY_T0000053:0;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	484296	484298	.	+	0	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG002_chrY_T0000053;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000053;transcript_name=HG002_chrY_T0000053;gene_name=SHOX;ID=start_codon:HG002_chrY_T0000053;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	484573	488015	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG002_chrY_T0000053;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000053;transcript_name=HG002_chrY_T0000053;gene_name=SHOX;ID=intron:HG002_chrY_T0000053:1;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	488016	488224	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG002_chrY_T0000053;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000053;transcript_name=HG002_chrY_T0000053;gene_name=SHOX;ID=exon:HG002_chrY_T0000053:2;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	488016	488224	.	+	2	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG002_chrY_T0000053;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000053;transcript_name=HG002_chrY_T0000053;gene_name=SHOX;ID=CDS:HG002_chrY_T0000053:1;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	488225	494049	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG002_chrY_T0000053;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000053;transcript_name=HG002_chrY_T0000053;gene_name=SHOX;ID=intron:HG002_chrY_T0000053:2;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	494050	494107	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG002_chrY_T0000053;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000053;transcript_name=HG002_chrY_T0000053;gene_name=SHOX;ID=exon:HG002_chrY_T0000053:3;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	494050	494107	.	+	0	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG002_chrY_T0000053;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000053;transcript_name=HG002_chrY_T0000053;gene_name=SHOX;ID=CDS:HG002_chrY_T0000053:2;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	494108	494227	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG002_chrY_T0000053;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000053;transcript_name=HG002_chrY_T0000053;gene_name=SHOX;ID=intron:HG002_chrY_T0000053:3;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	494228	494316	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG002_chrY_T0000053;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000053;transcript_name=HG002_chrY_T0000053;gene_name=SHOX;ID=exon:HG002_chrY_T0000053:4;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	494228	494316	.	+	2	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG002_chrY_T0000053;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000053;transcript_name=HG002_chrY_T0000053;gene_name=SHOX;ID=CDS:HG002_chrY_T0000053:3;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	494317	511954	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG002_chrY_T0000053;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000053;transcript_name=HG002_chrY_T0000053;gene_name=SHOX;ID=intron:HG002_chrY_T0000053:4;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	511955	512580	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG002_chrY_T0000053;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000053;transcript_name=HG002_chrY_T0000053;gene_name=SHOX;ID=exon:HG002_chrY_T0000053:5;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	511955	511999	.	+	0	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG002_chrY_T0000053;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000053;transcript_name=HG002_chrY_T0000053;gene_name=SHOX;ID=CDS:HG002_chrY_T0000053:4;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	511997	511999	.	+	0	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG002_chrY_T0000053;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000053;transcript_name=HG002_chrY_T0000053;gene_name=SHOX;ID=stop_codon:HG002_chrY_T0000053;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	478098	499984	100	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG002_chrY_T0000054;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_G0000013;transcript_name=HG002_chrY_T0000054;gene_name=SHOX;ID=HG002_chrY_T0000054;Name=SHOX
HG002_chrY	CAT	exon	478098	478358	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG002_chrY_T0000054;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000054;transcript_name=HG002_chrY_T0000054;gene_name=SHOX;ID=exon:HG002_chrY_T0000054:0;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	478359	483863	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG002_chrY_T0000054;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000054;transcript_name=HG002_chrY_T0000054;gene_name=SHOX;ID=intron:HG002_chrY_T0000054:0;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	483864	484572	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG002_chrY_T0000054;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000054;transcript_name=HG002_chrY_T0000054;gene_name=SHOX;ID=exon:HG002_chrY_T0000054:1;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	484296	484572	.	+	0	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG002_chrY_T0000054;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000054;transcript_name=HG002_chrY_T0000054;gene_name=SHOX;ID=CDS:HG002_chrY_T0000054:0;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	484296	484298	.	+	0	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG002_chrY_T0000054;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000054;transcript_name=HG002_chrY_T0000054;gene_name=SHOX;ID=start_codon:HG002_chrY_T0000054;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	484573	488015	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG002_chrY_T0000054;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000054;transcript_name=HG002_chrY_T0000054;gene_name=SHOX;ID=intron:HG002_chrY_T0000054:1;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	488016	488224	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG002_chrY_T0000054;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000054;transcript_name=HG002_chrY_T0000054;gene_name=SHOX;ID=exon:HG002_chrY_T0000054:2;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	488016	488224	.	+	2	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG002_chrY_T0000054;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000054;transcript_name=HG002_chrY_T0000054;gene_name=SHOX;ID=CDS:HG002_chrY_T0000054:1;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	488225	494049	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG002_chrY_T0000054;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000054;transcript_name=HG002_chrY_T0000054;gene_name=SHOX;ID=intron:HG002_chrY_T0000054:2;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	494050	494107	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG002_chrY_T0000054;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000054;transcript_name=HG002_chrY_T0000054;gene_name=SHOX;ID=exon:HG002_chrY_T0000054:3;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	494050	494107	.	+	0	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG002_chrY_T0000054;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000054;transcript_name=HG002_chrY_T0000054;gene_name=SHOX;ID=CDS:HG002_chrY_T0000054:2;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	494108	494227	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG002_chrY_T0000054;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000054;transcript_name=HG002_chrY_T0000054;gene_name=SHOX;ID=intron:HG002_chrY_T0000054:3;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	494228	494316	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG002_chrY_T0000054;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000054;transcript_name=HG002_chrY_T0000054;gene_name=SHOX;ID=exon:HG002_chrY_T0000054:4;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	494228	494316	.	+	2	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG002_chrY_T0000054;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000054;transcript_name=HG002_chrY_T0000054;gene_name=SHOX;ID=CDS:HG002_chrY_T0000054:3;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	494317	497563	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG002_chrY_T0000054;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000054;transcript_name=HG002_chrY_T0000054;gene_name=SHOX;ID=intron:HG002_chrY_T0000054:4;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	497564	499984	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG002_chrY_T0000054;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000054;transcript_name=HG002_chrY_T0000054;gene_name=SHOX;ID=exon:HG002_chrY_T0000054:5;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	497564	497809	.	+	0	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG002_chrY_T0000054;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000054;transcript_name=HG002_chrY_T0000054;gene_name=SHOX;ID=CDS:HG002_chrY_T0000054:4;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	497807	497809	.	+	0	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG002_chrY_T0000054;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000054;transcript_name=HG002_chrY_T0000054;gene_name=SHOX;ID=stop_codon:HG002_chrY_T0000054;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	484189	504686	9940	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=HG002_chrY_T0000055;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_G0000013;transcript_name=HG002_chrY_T0000055;gene_name=SHOX;ID=HG002_chrY_T0000055;Name=SHOX
HG002_chrY	CAT	exon	484189	484572	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=HG002_chrY_T0000055;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000055;transcript_name=HG002_chrY_T0000055;gene_name=SHOX;ID=exon:HG002_chrY_T0000055:0;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	484296	484572	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=HG002_chrY_T0000055;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000055;transcript_name=HG002_chrY_T0000055;gene_name=SHOX;ID=CDS:HG002_chrY_T0000055:0;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	484296	484298	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=HG002_chrY_T0000055;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000055;transcript_name=HG002_chrY_T0000055;gene_name=SHOX;ID=start_codon:HG002_chrY_T0000055;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	484573	488015	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=HG002_chrY_T0000055;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000055;transcript_name=HG002_chrY_T0000055;gene_name=SHOX;ID=intron:HG002_chrY_T0000055:0;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	488016	488224	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=HG002_chrY_T0000055;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000055;transcript_name=HG002_chrY_T0000055;gene_name=SHOX;ID=exon:HG002_chrY_T0000055:1;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	488016	488224	.	+	2	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=HG002_chrY_T0000055;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000055;transcript_name=HG002_chrY_T0000055;gene_name=SHOX;ID=CDS:HG002_chrY_T0000055:1;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	488225	494049	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=HG002_chrY_T0000055;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000055;transcript_name=HG002_chrY_T0000055;gene_name=SHOX;ID=intron:HG002_chrY_T0000055:1;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	494050	494107	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=HG002_chrY_T0000055;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000055;transcript_name=HG002_chrY_T0000055;gene_name=SHOX;ID=exon:HG002_chrY_T0000055:2;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	494050	494107	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=HG002_chrY_T0000055;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000055;transcript_name=HG002_chrY_T0000055;gene_name=SHOX;ID=CDS:HG002_chrY_T0000055:2;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	494108	494227	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=HG002_chrY_T0000055;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000055;transcript_name=HG002_chrY_T0000055;gene_name=SHOX;ID=intron:HG002_chrY_T0000055:2;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	494228	494316	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=HG002_chrY_T0000055;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000055;transcript_name=HG002_chrY_T0000055;gene_name=SHOX;ID=exon:HG002_chrY_T0000055:3;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	494228	494316	.	+	2	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=HG002_chrY_T0000055;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000055;transcript_name=HG002_chrY_T0000055;gene_name=SHOX;ID=CDS:HG002_chrY_T0000055:3;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	494317	497563	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=HG002_chrY_T0000055;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000055;transcript_name=HG002_chrY_T0000055;gene_name=SHOX;ID=intron:HG002_chrY_T0000055:3;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	497564	500918	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=HG002_chrY_T0000055;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000055;transcript_name=HG002_chrY_T0000055;gene_name=SHOX;ID=exon:HG002_chrY_T0000055:4;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	497564	497809	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=HG002_chrY_T0000055;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000055;transcript_name=HG002_chrY_T0000055;gene_name=SHOX;ID=CDS:HG002_chrY_T0000055:4;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	497807	497809	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=HG002_chrY_T0000055;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000055;transcript_name=HG002_chrY_T0000055;gene_name=SHOX;ID=stop_codon:HG002_chrY_T0000055;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	500919	501000	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=HG002_chrY_T0000055;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000055;transcript_name=HG002_chrY_T0000055;gene_name=SHOX;ID=intron:HG002_chrY_T0000055:4;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	501001	504686	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=HG002_chrY_T0000055;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000055;transcript_name=HG002_chrY_T0000055;gene_name=SHOX;ID=exon:HG002_chrY_T0000055:5;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	484189	504686	100	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=HG002_chrY_T0000056;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_G0000013;transcript_name=HG002_chrY_T0000056;gene_name=SHOX;ID=HG002_chrY_T0000056;Name=SHOX
HG002_chrY	CAT	exon	484189	484572	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=HG002_chrY_T0000056;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000056;transcript_name=HG002_chrY_T0000056;gene_name=SHOX;ID=exon:HG002_chrY_T0000056:0;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	484296	484572	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=HG002_chrY_T0000056;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000056;transcript_name=HG002_chrY_T0000056;gene_name=SHOX;ID=CDS:HG002_chrY_T0000056:0;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	484296	484298	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=HG002_chrY_T0000056;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000056;transcript_name=HG002_chrY_T0000056;gene_name=SHOX;ID=start_codon:HG002_chrY_T0000056;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	484573	488015	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=HG002_chrY_T0000056;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000056;transcript_name=HG002_chrY_T0000056;gene_name=SHOX;ID=intron:HG002_chrY_T0000056:0;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	488016	488224	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=HG002_chrY_T0000056;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000056;transcript_name=HG002_chrY_T0000056;gene_name=SHOX;ID=exon:HG002_chrY_T0000056:1;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	488016	488224	.	+	2	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=HG002_chrY_T0000056;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000056;transcript_name=HG002_chrY_T0000056;gene_name=SHOX;ID=CDS:HG002_chrY_T0000056:1;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	488225	494049	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=HG002_chrY_T0000056;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000056;transcript_name=HG002_chrY_T0000056;gene_name=SHOX;ID=intron:HG002_chrY_T0000056:1;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	494050	494107	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=HG002_chrY_T0000056;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000056;transcript_name=HG002_chrY_T0000056;gene_name=SHOX;ID=exon:HG002_chrY_T0000056:2;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	494050	494107	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=HG002_chrY_T0000056;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000056;transcript_name=HG002_chrY_T0000056;gene_name=SHOX;ID=CDS:HG002_chrY_T0000056:2;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	494108	494227	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=HG002_chrY_T0000056;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000056;transcript_name=HG002_chrY_T0000056;gene_name=SHOX;ID=intron:HG002_chrY_T0000056:2;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	494228	494316	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=HG002_chrY_T0000056;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000056;transcript_name=HG002_chrY_T0000056;gene_name=SHOX;ID=exon:HG002_chrY_T0000056:3;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	494228	494316	.	+	2	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=HG002_chrY_T0000056;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000056;transcript_name=HG002_chrY_T0000056;gene_name=SHOX;ID=CDS:HG002_chrY_T0000056:3;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	494317	497563	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=HG002_chrY_T0000056;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000056;transcript_name=HG002_chrY_T0000056;gene_name=SHOX;ID=intron:HG002_chrY_T0000056:3;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	497564	504686	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=HG002_chrY_T0000056;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000056;transcript_name=HG002_chrY_T0000056;gene_name=SHOX;ID=exon:HG002_chrY_T0000056:4;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	497564	497809	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=HG002_chrY_T0000056;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000056;transcript_name=HG002_chrY_T0000056;gene_name=SHOX;ID=CDS:HG002_chrY_T0000056:4;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	497807	497809	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=HG002_chrY_T0000056;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000056;transcript_name=HG002_chrY_T0000056;gene_name=SHOX;ID=stop_codon:HG002_chrY_T0000056;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	484205	512580	100	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG002_chrY_T0000057;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_G0000013;transcript_name=HG002_chrY_T0000057;gene_name=SHOX;ID=HG002_chrY_T0000057;Name=SHOX
HG002_chrY	CAT	exon	484205	484572	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG002_chrY_T0000057;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000057;transcript_name=HG002_chrY_T0000057;gene_name=SHOX;ID=exon:HG002_chrY_T0000057:0;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	484296	484572	.	+	0	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG002_chrY_T0000057;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000057;transcript_name=HG002_chrY_T0000057;gene_name=SHOX;ID=CDS:HG002_chrY_T0000057:0;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	484296	484298	.	+	0	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG002_chrY_T0000057;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000057;transcript_name=HG002_chrY_T0000057;gene_name=SHOX;ID=start_codon:HG002_chrY_T0000057;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	484573	488015	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG002_chrY_T0000057;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000057;transcript_name=HG002_chrY_T0000057;gene_name=SHOX;ID=intron:HG002_chrY_T0000057:0;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	488016	488224	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG002_chrY_T0000057;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000057;transcript_name=HG002_chrY_T0000057;gene_name=SHOX;ID=exon:HG002_chrY_T0000057:1;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	488016	488224	.	+	2	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG002_chrY_T0000057;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000057;transcript_name=HG002_chrY_T0000057;gene_name=SHOX;ID=CDS:HG002_chrY_T0000057:1;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	488225	494049	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG002_chrY_T0000057;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000057;transcript_name=HG002_chrY_T0000057;gene_name=SHOX;ID=intron:HG002_chrY_T0000057:1;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	494050	494107	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG002_chrY_T0000057;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000057;transcript_name=HG002_chrY_T0000057;gene_name=SHOX;ID=exon:HG002_chrY_T0000057:2;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	494050	494107	.	+	0	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG002_chrY_T0000057;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000057;transcript_name=HG002_chrY_T0000057;gene_name=SHOX;ID=CDS:HG002_chrY_T0000057:2;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	494108	494227	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG002_chrY_T0000057;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000057;transcript_name=HG002_chrY_T0000057;gene_name=SHOX;ID=intron:HG002_chrY_T0000057:2;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	494228	494316	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG002_chrY_T0000057;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000057;transcript_name=HG002_chrY_T0000057;gene_name=SHOX;ID=exon:HG002_chrY_T0000057:3;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	494228	494316	.	+	2	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG002_chrY_T0000057;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000057;transcript_name=HG002_chrY_T0000057;gene_name=SHOX;ID=CDS:HG002_chrY_T0000057:3;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	494317	511954	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG002_chrY_T0000057;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000057;transcript_name=HG002_chrY_T0000057;gene_name=SHOX;ID=intron:HG002_chrY_T0000057:3;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	511955	512580	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG002_chrY_T0000057;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000057;transcript_name=HG002_chrY_T0000057;gene_name=SHOX;ID=exon:HG002_chrY_T0000057:4;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	511955	511999	.	+	0	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG002_chrY_T0000057;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000057;transcript_name=HG002_chrY_T0000057;gene_name=SHOX;ID=CDS:HG002_chrY_T0000057:4;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	511997	511999	.	+	0	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG002_chrY_T0000057;gene_id=HG002_chrY_G0000013;Parent=HG002_chrY_T0000057;transcript_name=HG002_chrY_T0000057;gene_name=SHOX;ID=stop_codon:HG002_chrY_T0000057;Name=SHOX;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	818758	819701	.	-	.	source_gene_common_name=ENSG00000310541;source_gene=ENSG00000310541.1;alternative_source_transcripts=ENST00000850692.1,ENST00000850692.1;gene_id=HG002_chrY_G0000014;gene_biotype=lncRNA;gene_name=ENSG00000310541;gene_sources=liftoff;ID=HG002_chrY_G0000014;Name=ENSG00000310541
HG002_chrY	CAT	transcript	818758	819701	1000	-	.	source_transcript=ENST00000850692.1;source_transcript_name=ENST00000850692;source_gene=ENSG00000310541.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310541.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850692.1;transcript_score=298.35699999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310541;alternative_source_transcripts=ENST00000850692.1,ENST00000850692.1;transcript_id=HG002_chrY_T0000058;gene_id=HG002_chrY_G0000014;Parent=HG002_chrY_G0000014;transcript_name=HG002_chrY_T0000058;gene_name=ENSG00000310541;ID=HG002_chrY_T0000058;Name=ENSG00000310541
HG002_chrY	CAT	exon	818758	819086	.	-	.	source_transcript=ENST00000850692.1;source_transcript_name=ENST00000850692;source_gene=ENSG00000310541.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310541.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850692.1;transcript_score=298.35699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310541;alternative_source_transcripts=ENST00000850692.1,ENST00000850692.1;transcript_id=HG002_chrY_T0000058;gene_id=HG002_chrY_G0000014;Parent=HG002_chrY_T0000058;transcript_name=HG002_chrY_T0000058;gene_name=ENSG00000310541;ID=exon:HG002_chrY_T0000058:0;Name=ENSG00000310541;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	819087	819604	.	-	.	source_transcript=ENST00000850692.1;source_transcript_name=ENST00000850692;source_gene=ENSG00000310541.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310541.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850692.1;transcript_score=298.35699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310541;alternative_source_transcripts=ENST00000850692.1,ENST00000850692.1;transcript_id=HG002_chrY_T0000058;gene_id=HG002_chrY_G0000014;Parent=HG002_chrY_T0000058;transcript_name=HG002_chrY_T0000058;gene_name=ENSG00000310541;ID=intron:HG002_chrY_T0000058:0;Name=ENSG00000310541;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	819605	819701	.	-	.	source_transcript=ENST00000850692.1;source_transcript_name=ENST00000850692;source_gene=ENSG00000310541.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310541.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850692.1;transcript_score=298.35699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310541;alternative_source_transcripts=ENST00000850692.1,ENST00000850692.1;transcript_id=HG002_chrY_T0000058;gene_id=HG002_chrY_G0000014;Parent=HG002_chrY_T0000058;transcript_name=HG002_chrY_T0000058;gene_name=ENSG00000310541;ID=exon:HG002_chrY_T0000058:1;Name=ENSG00000310541;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	844638	848838	.	+	.	source_gene_common_name=ENSG00000292335;source_gene=ENSG00000292335.2;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;gene_id=HG002_chrY_G0000015;gene_biotype=lncRNA;gene_name=ENSG00000292335;gene_sources=liftoff;ID=HG002_chrY_G0000015;Name=ENSG00000292335
HG002_chrY	CAT	transcript	844638	848830	1000	+	.	source_transcript=ENST00000850729.1;source_transcript_name=ENST00000850729;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850729.1;transcript_score=299.486;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;transcript_id=HG002_chrY_T0000059;gene_id=HG002_chrY_G0000015;Parent=HG002_chrY_G0000015;transcript_name=HG002_chrY_T0000059;gene_name=ENSG00000292335;ID=HG002_chrY_T0000059;Name=ENSG00000292335
HG002_chrY	CAT	exon	844638	844969	.	+	.	source_transcript=ENST00000850729.1;source_transcript_name=ENST00000850729;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850729.1;transcript_score=299.486;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;transcript_id=HG002_chrY_T0000059;gene_id=HG002_chrY_G0000015;Parent=HG002_chrY_T0000059;transcript_name=HG002_chrY_T0000059;gene_name=ENSG00000292335;ID=exon:HG002_chrY_T0000059:0;Name=ENSG00000292335;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	844970	847829	.	+	.	source_transcript=ENST00000850729.1;source_transcript_name=ENST00000850729;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850729.1;transcript_score=299.486;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;transcript_id=HG002_chrY_T0000059;gene_id=HG002_chrY_G0000015;Parent=HG002_chrY_T0000059;transcript_name=HG002_chrY_T0000059;gene_name=ENSG00000292335;ID=intron:HG002_chrY_T0000059:0;Name=ENSG00000292335;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	847830	847893	.	+	.	source_transcript=ENST00000850729.1;source_transcript_name=ENST00000850729;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850729.1;transcript_score=299.486;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;transcript_id=HG002_chrY_T0000059;gene_id=HG002_chrY_G0000015;Parent=HG002_chrY_T0000059;transcript_name=HG002_chrY_T0000059;gene_name=ENSG00000292335;ID=exon:HG002_chrY_T0000059:1;Name=ENSG00000292335;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	847894	848448	.	+	.	source_transcript=ENST00000850729.1;source_transcript_name=ENST00000850729;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850729.1;transcript_score=299.486;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;transcript_id=HG002_chrY_T0000059;gene_id=HG002_chrY_G0000015;Parent=HG002_chrY_T0000059;transcript_name=HG002_chrY_T0000059;gene_name=ENSG00000292335;ID=intron:HG002_chrY_T0000059:1;Name=ENSG00000292335;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	848449	848830	.	+	.	source_transcript=ENST00000850729.1;source_transcript_name=ENST00000850729;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850729.1;transcript_score=299.486;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;transcript_id=HG002_chrY_T0000059;gene_id=HG002_chrY_G0000015;Parent=HG002_chrY_T0000059;transcript_name=HG002_chrY_T0000059;gene_name=ENSG00000292335;ID=exon:HG002_chrY_T0000059:2;Name=ENSG00000292335;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	844683	848830	1000	+	.	source_transcript=ENST00000850730.1;source_transcript_name=ENST00000850730;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850730.1;transcript_score=299.552;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850730.1,ENST00000850730.1;transcript_id=HG002_chrY_T0000060;gene_id=HG002_chrY_G0000015;Parent=HG002_chrY_G0000015;transcript_name=HG002_chrY_T0000060;gene_name=ENSG00000292335;ID=HG002_chrY_T0000060;Name=ENSG00000292335
HG002_chrY	CAT	exon	844683	844969	.	+	.	source_transcript=ENST00000850730.1;source_transcript_name=ENST00000850730;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850730.1;transcript_score=299.552;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850730.1,ENST00000850730.1;transcript_id=HG002_chrY_T0000060;gene_id=HG002_chrY_G0000015;Parent=HG002_chrY_T0000060;transcript_name=HG002_chrY_T0000060;gene_name=ENSG00000292335;ID=exon:HG002_chrY_T0000060:0;Name=ENSG00000292335;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	844970	848448	.	+	.	source_transcript=ENST00000850730.1;source_transcript_name=ENST00000850730;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850730.1;transcript_score=299.552;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850730.1,ENST00000850730.1;transcript_id=HG002_chrY_T0000060;gene_id=HG002_chrY_G0000015;Parent=HG002_chrY_T0000060;transcript_name=HG002_chrY_T0000060;gene_name=ENSG00000292335;ID=intron:HG002_chrY_T0000060:0;Name=ENSG00000292335;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	848449	848830	.	+	.	source_transcript=ENST00000850730.1;source_transcript_name=ENST00000850730;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850730.1;transcript_score=299.552;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850730.1,ENST00000850730.1;transcript_id=HG002_chrY_T0000060;gene_id=HG002_chrY_G0000015;Parent=HG002_chrY_T0000060;transcript_name=HG002_chrY_T0000060;gene_name=ENSG00000292335;ID=exon:HG002_chrY_T0000060:1;Name=ENSG00000292335;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	844718	848830	1000	+	.	source_transcript=ENST00000850731.1;source_transcript_name=ENST00000850731;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850731.1;transcript_score=299.567;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850731.1,ENST00000850731.1;transcript_id=HG002_chrY_T0000061;gene_id=HG002_chrY_G0000015;Parent=HG002_chrY_G0000015;transcript_name=HG002_chrY_T0000061;gene_name=ENSG00000292335;ID=HG002_chrY_T0000061;Name=ENSG00000292335
HG002_chrY	CAT	exon	844718	844964	.	+	.	source_transcript=ENST00000850731.1;source_transcript_name=ENST00000850731;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850731.1;transcript_score=299.567;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850731.1,ENST00000850731.1;transcript_id=HG002_chrY_T0000061;gene_id=HG002_chrY_G0000015;Parent=HG002_chrY_T0000061;transcript_name=HG002_chrY_T0000061;gene_name=ENSG00000292335;ID=exon:HG002_chrY_T0000061:0;Name=ENSG00000292335;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	844965	847829	.	+	.	source_transcript=ENST00000850731.1;source_transcript_name=ENST00000850731;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850731.1;transcript_score=299.567;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850731.1,ENST00000850731.1;transcript_id=HG002_chrY_T0000061;gene_id=HG002_chrY_G0000015;Parent=HG002_chrY_T0000061;transcript_name=HG002_chrY_T0000061;gene_name=ENSG00000292335;ID=intron:HG002_chrY_T0000061:0;Name=ENSG00000292335;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	847830	847893	.	+	.	source_transcript=ENST00000850731.1;source_transcript_name=ENST00000850731;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850731.1;transcript_score=299.567;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850731.1,ENST00000850731.1;transcript_id=HG002_chrY_T0000061;gene_id=HG002_chrY_G0000015;Parent=HG002_chrY_T0000061;transcript_name=HG002_chrY_T0000061;gene_name=ENSG00000292335;ID=exon:HG002_chrY_T0000061:1;Name=ENSG00000292335;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	847894	848448	.	+	.	source_transcript=ENST00000850731.1;source_transcript_name=ENST00000850731;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850731.1;transcript_score=299.567;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850731.1,ENST00000850731.1;transcript_id=HG002_chrY_T0000061;gene_id=HG002_chrY_G0000015;Parent=HG002_chrY_T0000061;transcript_name=HG002_chrY_T0000061;gene_name=ENSG00000292335;ID=intron:HG002_chrY_T0000061:1;Name=ENSG00000292335;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	848449	848830	.	+	.	source_transcript=ENST00000850731.1;source_transcript_name=ENST00000850731;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850731.1;transcript_score=299.567;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850731.1,ENST00000850731.1;transcript_id=HG002_chrY_T0000061;gene_id=HG002_chrY_G0000015;Parent=HG002_chrY_T0000061;transcript_name=HG002_chrY_T0000061;gene_name=ENSG00000292335;ID=exon:HG002_chrY_T0000061:2;Name=ENSG00000292335;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	844733	848838	1000	+	.	source_transcript=ENST00000850826.1;source_transcript_name=ENST00000850826;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850826.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850826.1;transcript_score=299.51800000000003;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850826.1,ENST00000850826.1;transcript_id=HG002_chrY_T0000062;gene_id=HG002_chrY_G0000015;Parent=HG002_chrY_G0000015;transcript_name=HG002_chrY_T0000062;gene_name=ENSG00000292335;ID=HG002_chrY_T0000062;Name=ENSG00000292335
HG002_chrY	CAT	exon	844733	844964	.	+	.	source_transcript=ENST00000850826.1;source_transcript_name=ENST00000850826;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850826.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850826.1;transcript_score=299.51800000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850826.1,ENST00000850826.1;transcript_id=HG002_chrY_T0000062;gene_id=HG002_chrY_G0000015;Parent=HG002_chrY_T0000062;transcript_name=HG002_chrY_T0000062;gene_name=ENSG00000292335;ID=exon:HG002_chrY_T0000062:0;Name=ENSG00000292335;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	844965	848448	.	+	.	source_transcript=ENST00000850826.1;source_transcript_name=ENST00000850826;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850826.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850826.1;transcript_score=299.51800000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850826.1,ENST00000850826.1;transcript_id=HG002_chrY_T0000062;gene_id=HG002_chrY_G0000015;Parent=HG002_chrY_T0000062;transcript_name=HG002_chrY_T0000062;gene_name=ENSG00000292335;ID=intron:HG002_chrY_T0000062:0;Name=ENSG00000292335;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	848449	848838	.	+	.	source_transcript=ENST00000850826.1;source_transcript_name=ENST00000850826;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850826.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850826.1;transcript_score=299.51800000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850826.1,ENST00000850826.1;transcript_id=HG002_chrY_T0000062;gene_id=HG002_chrY_G0000015;Parent=HG002_chrY_T0000062;transcript_name=HG002_chrY_T0000062;gene_name=ENSG00000292335;ID=exon:HG002_chrY_T0000062:1;Name=ENSG00000292335;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	862943	864541	.	-	.	source_gene_common_name=RPL14P5;source_gene=ENSG00000292328.1;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;gene_id=HG002_chrY_G0000016;gene_biotype=processed_pseudogene;gene_name=RPL14P5;gene_sources=liftoff;ID=HG002_chrY_G0000016;Name=RPL14P5
HG002_chrY	CAT	transcript	862943	864541	1000	-	.	source_transcript=ENST00000711122.1;source_transcript_name=RPL14P5-202;source_gene=ENSG00000292328.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292328.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711122.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711122.1;transcript_score=299.863;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL14P5;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;transcript_id=HG002_chrY_T0000063;gene_id=HG002_chrY_G0000016;Parent=HG002_chrY_G0000016;transcript_name=HG002_chrY_T0000063;gene_name=RPL14P5;ID=HG002_chrY_T0000063;Name=RPL14P5
HG002_chrY	CAT	exon	862943	862991	.	-	.	source_transcript=ENST00000711122.1;source_transcript_name=RPL14P5-202;source_gene=ENSG00000292328.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292328.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711122.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711122.1;transcript_score=299.863;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL14P5;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;transcript_id=HG002_chrY_T0000063;gene_id=HG002_chrY_G0000016;Parent=HG002_chrY_T0000063;transcript_name=HG002_chrY_T0000063;gene_name=RPL14P5;ID=exon:HG002_chrY_T0000063:0;Name=RPL14P5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	862992	863531	.	-	.	source_transcript=ENST00000711122.1;source_transcript_name=RPL14P5-202;source_gene=ENSG00000292328.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292328.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711122.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711122.1;transcript_score=299.863;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL14P5;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;transcript_id=HG002_chrY_T0000063;gene_id=HG002_chrY_G0000016;Parent=HG002_chrY_T0000063;transcript_name=HG002_chrY_T0000063;gene_name=RPL14P5;ID=intron:HG002_chrY_T0000063:0;Name=RPL14P5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	863532	863820	.	-	.	source_transcript=ENST00000711122.1;source_transcript_name=RPL14P5-202;source_gene=ENSG00000292328.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292328.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711122.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711122.1;transcript_score=299.863;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL14P5;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;transcript_id=HG002_chrY_T0000063;gene_id=HG002_chrY_G0000016;Parent=HG002_chrY_T0000063;transcript_name=HG002_chrY_T0000063;gene_name=RPL14P5;ID=exon:HG002_chrY_T0000063:1;Name=RPL14P5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	863821	864149	.	-	.	source_transcript=ENST00000711122.1;source_transcript_name=RPL14P5-202;source_gene=ENSG00000292328.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292328.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711122.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711122.1;transcript_score=299.863;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL14P5;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;transcript_id=HG002_chrY_T0000063;gene_id=HG002_chrY_G0000016;Parent=HG002_chrY_T0000063;transcript_name=HG002_chrY_T0000063;gene_name=RPL14P5;ID=intron:HG002_chrY_T0000063:1;Name=RPL14P5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	864150	864541	.	-	.	source_transcript=ENST00000711122.1;source_transcript_name=RPL14P5-202;source_gene=ENSG00000292328.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292328.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711122.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711122.1;transcript_score=299.863;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL14P5;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;transcript_id=HG002_chrY_T0000063;gene_id=HG002_chrY_G0000016;Parent=HG002_chrY_T0000063;transcript_name=HG002_chrY_T0000063;gene_name=RPL14P5;ID=exon:HG002_chrY_T0000063:2;Name=RPL14P5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	969057	970040	.	+	.	source_gene_common_name=ENSG00000310548;source_gene=ENSG00000310548.1;alternative_source_transcripts=ENST00000850715.1,ENST00000850715.1;gene_id=HG002_chrY_G0000017;gene_biotype=lncRNA;gene_name=ENSG00000310548;gene_sources=liftoff;ID=HG002_chrY_G0000017;Name=ENSG00000310548
HG002_chrY	CAT	transcript	969057	970040	1000	+	.	source_transcript=ENST00000850715.1;source_transcript_name=ENST00000850715;source_gene=ENSG00000310548.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310548.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850715.1;transcript_score=299.76300000000003;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310548;alternative_source_transcripts=ENST00000850715.1,ENST00000850715.1;transcript_id=HG002_chrY_T0000064;gene_id=HG002_chrY_G0000017;Parent=HG002_chrY_G0000017;transcript_name=HG002_chrY_T0000064;gene_name=ENSG00000310548;ID=HG002_chrY_T0000064;Name=ENSG00000310548
HG002_chrY	CAT	exon	969057	969182	.	+	.	source_transcript=ENST00000850715.1;source_transcript_name=ENST00000850715;source_gene=ENSG00000310548.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310548.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850715.1;transcript_score=299.76300000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310548;alternative_source_transcripts=ENST00000850715.1,ENST00000850715.1;transcript_id=HG002_chrY_T0000064;gene_id=HG002_chrY_G0000017;Parent=HG002_chrY_T0000064;transcript_name=HG002_chrY_T0000064;gene_name=ENSG00000310548;ID=exon:HG002_chrY_T0000064:0;Name=ENSG00000310548;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	969183	969316	.	+	.	source_transcript=ENST00000850715.1;source_transcript_name=ENST00000850715;source_gene=ENSG00000310548.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310548.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850715.1;transcript_score=299.76300000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310548;alternative_source_transcripts=ENST00000850715.1,ENST00000850715.1;transcript_id=HG002_chrY_T0000064;gene_id=HG002_chrY_G0000017;Parent=HG002_chrY_T0000064;transcript_name=HG002_chrY_T0000064;gene_name=ENSG00000310548;ID=intron:HG002_chrY_T0000064:0;Name=ENSG00000310548;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	969317	970040	.	+	.	source_transcript=ENST00000850715.1;source_transcript_name=ENST00000850715;source_gene=ENSG00000310548.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310548.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850715.1;transcript_score=299.76300000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310548;alternative_source_transcripts=ENST00000850715.1,ENST00000850715.1;transcript_id=HG002_chrY_T0000064;gene_id=HG002_chrY_G0000017;Parent=HG002_chrY_T0000064;transcript_name=HG002_chrY_T0000064;gene_name=ENSG00000310548;ID=exon:HG002_chrY_T0000064:1;Name=ENSG00000310548;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	1029815	1039483	.	+	.	source_gene_common_name=ENSG00000310556;source_gene=ENSG00000310556.1;alternative_source_transcripts=ENST00000850736.1,ENST00000850736.1;gene_id=HG002_chrY_G0000018;gene_biotype=lncRNA;gene_name=ENSG00000310556;gene_sources=liftoff;ID=HG002_chrY_G0000018;Name=ENSG00000310556
HG002_chrY	CAT	transcript	1029815	1034139	1000	+	.	source_transcript=ENST00000850736.1;source_transcript_name=ENST00000850736;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850736.1;transcript_score=299.616;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850736.1,ENST00000850736.1;transcript_id=HG002_chrY_T0000065;gene_id=HG002_chrY_G0000018;Parent=HG002_chrY_G0000018;transcript_name=HG002_chrY_T0000065;gene_name=ENSG00000310556;ID=HG002_chrY_T0000065;Name=ENSG00000310556
HG002_chrY	CAT	exon	1029815	1029901	.	+	.	source_transcript=ENST00000850736.1;source_transcript_name=ENST00000850736;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850736.1;transcript_score=299.616;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850736.1,ENST00000850736.1;transcript_id=HG002_chrY_T0000065;gene_id=HG002_chrY_G0000018;Parent=HG002_chrY_T0000065;transcript_name=HG002_chrY_T0000065;gene_name=ENSG00000310556;ID=exon:HG002_chrY_T0000065:0;Name=ENSG00000310556;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1029902	1033183	.	+	.	source_transcript=ENST00000850736.1;source_transcript_name=ENST00000850736;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850736.1;transcript_score=299.616;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850736.1,ENST00000850736.1;transcript_id=HG002_chrY_T0000065;gene_id=HG002_chrY_G0000018;Parent=HG002_chrY_T0000065;transcript_name=HG002_chrY_T0000065;gene_name=ENSG00000310556;ID=intron:HG002_chrY_T0000065:0;Name=ENSG00000310556;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1033184	1034139	.	+	.	source_transcript=ENST00000850736.1;source_transcript_name=ENST00000850736;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850736.1;transcript_score=299.616;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850736.1,ENST00000850736.1;transcript_id=HG002_chrY_T0000065;gene_id=HG002_chrY_G0000018;Parent=HG002_chrY_T0000065;transcript_name=HG002_chrY_T0000065;gene_name=ENSG00000310556;ID=exon:HG002_chrY_T0000065:1;Name=ENSG00000310556;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1029843	1039483	1000	+	.	source_transcript=ENST00000850735.1;source_transcript_name=ENST00000850735;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850735.1;transcript_score=299.848;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850735.1,ENST00000850735.1;transcript_id=HG002_chrY_T0000066;gene_id=HG002_chrY_G0000018;Parent=HG002_chrY_G0000018;transcript_name=HG002_chrY_T0000066;gene_name=ENSG00000310556;ID=HG002_chrY_T0000066;Name=ENSG00000310556
HG002_chrY	CAT	exon	1029843	1029901	.	+	.	source_transcript=ENST00000850735.1;source_transcript_name=ENST00000850735;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850735.1;transcript_score=299.848;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850735.1,ENST00000850735.1;transcript_id=HG002_chrY_T0000066;gene_id=HG002_chrY_G0000018;Parent=HG002_chrY_T0000066;transcript_name=HG002_chrY_T0000066;gene_name=ENSG00000310556;ID=exon:HG002_chrY_T0000066:0;Name=ENSG00000310556;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1029902	1033183	.	+	.	source_transcript=ENST00000850735.1;source_transcript_name=ENST00000850735;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850735.1;transcript_score=299.848;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850735.1,ENST00000850735.1;transcript_id=HG002_chrY_T0000066;gene_id=HG002_chrY_G0000018;Parent=HG002_chrY_T0000066;transcript_name=HG002_chrY_T0000066;gene_name=ENSG00000310556;ID=intron:HG002_chrY_T0000066:0;Name=ENSG00000310556;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1033184	1033519	.	+	.	source_transcript=ENST00000850735.1;source_transcript_name=ENST00000850735;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850735.1;transcript_score=299.848;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850735.1,ENST00000850735.1;transcript_id=HG002_chrY_T0000066;gene_id=HG002_chrY_G0000018;Parent=HG002_chrY_T0000066;transcript_name=HG002_chrY_T0000066;gene_name=ENSG00000310556;ID=exon:HG002_chrY_T0000066:1;Name=ENSG00000310556;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1033520	1039220	.	+	.	source_transcript=ENST00000850735.1;source_transcript_name=ENST00000850735;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850735.1;transcript_score=299.848;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850735.1,ENST00000850735.1;transcript_id=HG002_chrY_T0000066;gene_id=HG002_chrY_G0000018;Parent=HG002_chrY_T0000066;transcript_name=HG002_chrY_T0000066;gene_name=ENSG00000310556;ID=intron:HG002_chrY_T0000066:1;Name=ENSG00000310556;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1039221	1039483	.	+	.	source_transcript=ENST00000850735.1;source_transcript_name=ENST00000850735;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850735.1;transcript_score=299.848;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850735.1,ENST00000850735.1;transcript_id=HG002_chrY_T0000066;gene_id=HG002_chrY_G0000018;Parent=HG002_chrY_T0000066;transcript_name=HG002_chrY_T0000066;gene_name=ENSG00000310556;ID=exon:HG002_chrY_T0000066:2;Name=ENSG00000310556;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	1050450	1072765	.	-	.	source_gene_common_name=CRLF2;source_gene=ENSG00000292363.1;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;gene_id=HG002_chrY_G0000019;gene_biotype=protein_coding;gene_name=CRLF2;gene_sources=liftoff;ID=HG002_chrY_G0000019;Name=CRLF2
HG002_chrY	CAT	transcript	1050450	1072691	100	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG002_chrY_T0000067;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_G0000019;transcript_name=HG002_chrY_T0000067;gene_name=CRLF2;ID=HG002_chrY_T0000067;Name=CRLF2
HG002_chrY	CAT	exon	1050450	1051120	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG002_chrY_T0000067;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000067;transcript_name=HG002_chrY_T0000067;gene_name=CRLF2;ID=exon:HG002_chrY_T0000067:0;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1050857	1051120	.	-	0	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG002_chrY_T0000067;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000067;transcript_name=HG002_chrY_T0000067;gene_name=CRLF2;ID=CDS:HG002_chrY_T0000067:0;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1050857	1050859	.	-	0	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG002_chrY_T0000067;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000067;transcript_name=HG002_chrY_T0000067;gene_name=CRLF2;ID=stop_codon:HG002_chrY_T0000067;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1051121	1053184	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG002_chrY_T0000067;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000067;transcript_name=HG002_chrY_T0000067;gene_name=CRLF2;ID=intron:HG002_chrY_T0000067:0;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1053185	1053269	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG002_chrY_T0000067;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000067;transcript_name=HG002_chrY_T0000067;gene_name=CRLF2;ID=exon:HG002_chrY_T0000067:1;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1053185	1053269	.	-	1	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG002_chrY_T0000067;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000067;transcript_name=HG002_chrY_T0000067;gene_name=CRLF2;ID=CDS:HG002_chrY_T0000067:1;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1053270	1056748	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG002_chrY_T0000067;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000067;transcript_name=HG002_chrY_T0000067;gene_name=CRLF2;ID=intron:HG002_chrY_T0000067:1;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1056749	1056869	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG002_chrY_T0000067;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000067;transcript_name=HG002_chrY_T0000067;gene_name=CRLF2;ID=exon:HG002_chrY_T0000067:2;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1056749	1056869	.	-	2	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG002_chrY_T0000067;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000067;transcript_name=HG002_chrY_T0000067;gene_name=CRLF2;ID=CDS:HG002_chrY_T0000067:2;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1056870	1058565	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG002_chrY_T0000067;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000067;transcript_name=HG002_chrY_T0000067;gene_name=CRLF2;ID=intron:HG002_chrY_T0000067:2;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1058566	1058728	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG002_chrY_T0000067;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000067;transcript_name=HG002_chrY_T0000067;gene_name=CRLF2;ID=exon:HG002_chrY_T0000067:3;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1058566	1058728	.	-	0	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG002_chrY_T0000067;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000067;transcript_name=HG002_chrY_T0000067;gene_name=CRLF2;ID=CDS:HG002_chrY_T0000067:3;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1058729	1062414	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG002_chrY_T0000067;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000067;transcript_name=HG002_chrY_T0000067;gene_name=CRLF2;ID=intron:HG002_chrY_T0000067:3;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1062415	1062548	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG002_chrY_T0000067;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000067;transcript_name=HG002_chrY_T0000067;gene_name=CRLF2;ID=exon:HG002_chrY_T0000067:4;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1062415	1062548	.	-	2	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG002_chrY_T0000067;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000067;transcript_name=HG002_chrY_T0000067;gene_name=CRLF2;ID=CDS:HG002_chrY_T0000067:4;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1062549	1066470	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG002_chrY_T0000067;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000067;transcript_name=HG002_chrY_T0000067;gene_name=CRLF2;ID=intron:HG002_chrY_T0000067:4;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1066471	1066637	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG002_chrY_T0000067;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000067;transcript_name=HG002_chrY_T0000067;gene_name=CRLF2;ID=exon:HG002_chrY_T0000067:5;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1066471	1066637	.	-	1	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG002_chrY_T0000067;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000067;transcript_name=HG002_chrY_T0000067;gene_name=CRLF2;ID=CDS:HG002_chrY_T0000067:5;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1066638	1068840	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG002_chrY_T0000067;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000067;transcript_name=HG002_chrY_T0000067;gene_name=CRLF2;ID=intron:HG002_chrY_T0000067:5;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1068841	1068943	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG002_chrY_T0000067;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000067;transcript_name=HG002_chrY_T0000067;gene_name=CRLF2;ID=exon:HG002_chrY_T0000067:6;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1068841	1068943	.	-	2	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG002_chrY_T0000067;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000067;transcript_name=HG002_chrY_T0000067;gene_name=CRLF2;ID=CDS:HG002_chrY_T0000067:6;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1068944	1072597	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG002_chrY_T0000067;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000067;transcript_name=HG002_chrY_T0000067;gene_name=CRLF2;ID=intron:HG002_chrY_T0000067:6;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1072598	1072691	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG002_chrY_T0000067;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000067;transcript_name=HG002_chrY_T0000067;gene_name=CRLF2;ID=exon:HG002_chrY_T0000067:7;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1072598	1072676	.	-	0	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG002_chrY_T0000067;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000067;transcript_name=HG002_chrY_T0000067;gene_name=CRLF2;ID=CDS:HG002_chrY_T0000067:7;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1072674	1072676	.	-	0	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG002_chrY_T0000067;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000067;transcript_name=HG002_chrY_T0000067;gene_name=CRLF2;ID=start_codon:HG002_chrY_T0000067;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1050452	1072765	1000	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG002_chrY_T0000068;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_G0000019;transcript_name=HG002_chrY_T0000068;gene_name=CRLF2;ID=HG002_chrY_T0000068;Name=CRLF2
HG002_chrY	CAT	exon	1050452	1051120	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG002_chrY_T0000068;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000068;transcript_name=HG002_chrY_T0000068;gene_name=CRLF2;ID=exon:HG002_chrY_T0000068:0;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1051121	1053184	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG002_chrY_T0000068;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000068;transcript_name=HG002_chrY_T0000068;gene_name=CRLF2;ID=intron:HG002_chrY_T0000068:0;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1053185	1053269	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG002_chrY_T0000068;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000068;transcript_name=HG002_chrY_T0000068;gene_name=CRLF2;ID=exon:HG002_chrY_T0000068:1;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1053270	1056748	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG002_chrY_T0000068;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000068;transcript_name=HG002_chrY_T0000068;gene_name=CRLF2;ID=intron:HG002_chrY_T0000068:1;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1056749	1056869	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG002_chrY_T0000068;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000068;transcript_name=HG002_chrY_T0000068;gene_name=CRLF2;ID=exon:HG002_chrY_T0000068:2;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1056870	1058806	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG002_chrY_T0000068;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000068;transcript_name=HG002_chrY_T0000068;gene_name=CRLF2;ID=intron:HG002_chrY_T0000068:2;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1058807	1059151	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG002_chrY_T0000068;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000068;transcript_name=HG002_chrY_T0000068;gene_name=CRLF2;ID=exon:HG002_chrY_T0000068:3;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1058933	1059151	.	-	0	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG002_chrY_T0000068;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000068;transcript_name=HG002_chrY_T0000068;gene_name=CRLF2;ID=CDS:HG002_chrY_T0000068:0;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1058933	1058935	.	-	0	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG002_chrY_T0000068;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000068;transcript_name=HG002_chrY_T0000068;gene_name=CRLF2;ID=stop_codon:HG002_chrY_T0000068;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1059152	1062414	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG002_chrY_T0000068;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000068;transcript_name=HG002_chrY_T0000068;gene_name=CRLF2;ID=intron:HG002_chrY_T0000068:3;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1062415	1062548	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG002_chrY_T0000068;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000068;transcript_name=HG002_chrY_T0000068;gene_name=CRLF2;ID=exon:HG002_chrY_T0000068:4;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1062415	1062548	.	-	2	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG002_chrY_T0000068;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000068;transcript_name=HG002_chrY_T0000068;gene_name=CRLF2;ID=CDS:HG002_chrY_T0000068:1;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1062549	1066470	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG002_chrY_T0000068;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000068;transcript_name=HG002_chrY_T0000068;gene_name=CRLF2;ID=intron:HG002_chrY_T0000068:4;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1066471	1066637	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG002_chrY_T0000068;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000068;transcript_name=HG002_chrY_T0000068;gene_name=CRLF2;ID=exon:HG002_chrY_T0000068:5;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1066471	1066637	.	-	1	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG002_chrY_T0000068;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000068;transcript_name=HG002_chrY_T0000068;gene_name=CRLF2;ID=CDS:HG002_chrY_T0000068:2;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1066638	1068840	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG002_chrY_T0000068;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000068;transcript_name=HG002_chrY_T0000068;gene_name=CRLF2;ID=intron:HG002_chrY_T0000068:5;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1068841	1068940	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG002_chrY_T0000068;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000068;transcript_name=HG002_chrY_T0000068;gene_name=CRLF2;ID=exon:HG002_chrY_T0000068:6;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1068841	1068940	.	-	2	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG002_chrY_T0000068;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000068;transcript_name=HG002_chrY_T0000068;gene_name=CRLF2;ID=CDS:HG002_chrY_T0000068:3;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1068941	1072597	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG002_chrY_T0000068;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000068;transcript_name=HG002_chrY_T0000068;gene_name=CRLF2;ID=intron:HG002_chrY_T0000068:6;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1072598	1072765	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG002_chrY_T0000068;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000068;transcript_name=HG002_chrY_T0000068;gene_name=CRLF2;ID=exon:HG002_chrY_T0000068:7;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1072598	1072676	.	-	0	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG002_chrY_T0000068;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000068;transcript_name=HG002_chrY_T0000068;gene_name=CRLF2;ID=CDS:HG002_chrY_T0000068:4;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1072674	1072676	.	-	0	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG002_chrY_T0000068;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000068;transcript_name=HG002_chrY_T0000068;gene_name=CRLF2;ID=start_codon:HG002_chrY_T0000068;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1050857	1072676	100	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG002_chrY_T0000069;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_G0000019;transcript_name=HG002_chrY_T0000069;gene_name=CRLF2;ID=HG002_chrY_T0000069;Name=CRLF2
HG002_chrY	CAT	exon	1050857	1051120	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG002_chrY_T0000069;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000069;transcript_name=HG002_chrY_T0000069;gene_name=CRLF2;ID=exon:HG002_chrY_T0000069:0;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1050857	1051120	.	-	0	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG002_chrY_T0000069;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000069;transcript_name=HG002_chrY_T0000069;gene_name=CRLF2;ID=CDS:HG002_chrY_T0000069:0;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1050857	1050859	.	-	0	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG002_chrY_T0000069;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000069;transcript_name=HG002_chrY_T0000069;gene_name=CRLF2;ID=stop_codon:HG002_chrY_T0000069;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1051121	1053184	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG002_chrY_T0000069;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000069;transcript_name=HG002_chrY_T0000069;gene_name=CRLF2;ID=intron:HG002_chrY_T0000069:0;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1053185	1053269	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG002_chrY_T0000069;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000069;transcript_name=HG002_chrY_T0000069;gene_name=CRLF2;ID=exon:HG002_chrY_T0000069:1;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1053185	1053269	.	-	1	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG002_chrY_T0000069;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000069;transcript_name=HG002_chrY_T0000069;gene_name=CRLF2;ID=CDS:HG002_chrY_T0000069:1;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1053270	1056748	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG002_chrY_T0000069;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000069;transcript_name=HG002_chrY_T0000069;gene_name=CRLF2;ID=intron:HG002_chrY_T0000069:1;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1056749	1056869	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG002_chrY_T0000069;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000069;transcript_name=HG002_chrY_T0000069;gene_name=CRLF2;ID=exon:HG002_chrY_T0000069:2;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1056749	1056869	.	-	2	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG002_chrY_T0000069;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000069;transcript_name=HG002_chrY_T0000069;gene_name=CRLF2;ID=CDS:HG002_chrY_T0000069:2;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1056870	1058565	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG002_chrY_T0000069;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000069;transcript_name=HG002_chrY_T0000069;gene_name=CRLF2;ID=intron:HG002_chrY_T0000069:2;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1058566	1058728	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG002_chrY_T0000069;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000069;transcript_name=HG002_chrY_T0000069;gene_name=CRLF2;ID=exon:HG002_chrY_T0000069:3;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1058566	1058728	.	-	0	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG002_chrY_T0000069;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000069;transcript_name=HG002_chrY_T0000069;gene_name=CRLF2;ID=CDS:HG002_chrY_T0000069:3;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1058729	1062414	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG002_chrY_T0000069;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000069;transcript_name=HG002_chrY_T0000069;gene_name=CRLF2;ID=intron:HG002_chrY_T0000069:3;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1062415	1062548	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG002_chrY_T0000069;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000069;transcript_name=HG002_chrY_T0000069;gene_name=CRLF2;ID=exon:HG002_chrY_T0000069:4;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1062415	1062548	.	-	2	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG002_chrY_T0000069;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000069;transcript_name=HG002_chrY_T0000069;gene_name=CRLF2;ID=CDS:HG002_chrY_T0000069:4;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1062549	1066470	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG002_chrY_T0000069;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000069;transcript_name=HG002_chrY_T0000069;gene_name=CRLF2;ID=intron:HG002_chrY_T0000069:4;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1066471	1066637	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG002_chrY_T0000069;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000069;transcript_name=HG002_chrY_T0000069;gene_name=CRLF2;ID=exon:HG002_chrY_T0000069:5;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1066471	1066483	.	-	0	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG002_chrY_T0000069;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000069;transcript_name=HG002_chrY_T0000069;gene_name=CRLF2;ID=CDS:HG002_chrY_T0000069:5;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1066481	1066483	.	-	0	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG002_chrY_T0000069;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000069;transcript_name=HG002_chrY_T0000069;gene_name=CRLF2;ID=start_codon:HG002_chrY_T0000069;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1066638	1072597	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG002_chrY_T0000069;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000069;transcript_name=HG002_chrY_T0000069;gene_name=CRLF2;ID=intron:HG002_chrY_T0000069:5;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1072598	1072676	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG002_chrY_T0000069;gene_id=HG002_chrY_G0000019;Parent=HG002_chrY_T0000069;transcript_name=HG002_chrY_T0000069;gene_name=CRLF2;ID=exon:HG002_chrY_T0000069:6;Name=CRLF2;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	1108669	1109671	.	-	.	source_gene_common_name=ENSG00000310545;source_gene=ENSG00000310545.1;alternative_source_transcripts=ENST00000850707.1,ENST00000850707.1;gene_id=HG002_chrY_G0000020;gene_biotype=lncRNA;gene_name=ENSG00000310545;gene_sources=liftoff;ID=HG002_chrY_G0000020;Name=ENSG00000310545
HG002_chrY	CAT	transcript	1108669	1109671	1000	-	.	source_transcript=ENST00000850707.1;source_transcript_name=ENST00000850707;source_gene=ENSG00000310545.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310545.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850707.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310545;alternative_source_transcripts=ENST00000850707.1,ENST00000850707.1;transcript_id=HG002_chrY_T0000070;gene_id=HG002_chrY_G0000020;Parent=HG002_chrY_G0000020;transcript_name=HG002_chrY_T0000070;gene_name=ENSG00000310545;ID=HG002_chrY_T0000070;Name=ENSG00000310545
HG002_chrY	CAT	exon	1108669	1109671	.	-	.	source_transcript=ENST00000850707.1;source_transcript_name=ENST00000850707;source_gene=ENSG00000310545.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310545.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850707.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310545;alternative_source_transcripts=ENST00000850707.1,ENST00000850707.1;transcript_id=HG002_chrY_T0000070;gene_id=HG002_chrY_G0000020;Parent=HG002_chrY_T0000070;transcript_name=HG002_chrY_T0000070;gene_name=ENSG00000310545;ID=exon:HG002_chrY_T0000070:0;Name=ENSG00000310545;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	1108691	1124211	.	+	.	source_gene_common_name=ENSG00000310544;source_gene=ENSG00000310544.1;gene_id=HG002_chrY_G0000021;gene_biotype=lncRNA;gene_name=ENSG00000310544;gene_sources=liftoff,transMap,transMap_pairwise;ID=HG002_chrY_G0000021;Name=ENSG00000310544
HG002_chrY	CAT	transcript	1108691	1124211	1000	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850705.1;transcript_score=249.621;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=HG002_chrY_T0000071;gene_id=HG002_chrY_G0000021;Parent=HG002_chrY_G0000021;transcript_name=HG002_chrY_T0000071;gene_name=ENSG00000310544;ID=HG002_chrY_T0000071;Name=ENSG00000310544
HG002_chrY	CAT	exon	1108691	1109625	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850705.1;transcript_score=249.621;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=HG002_chrY_T0000071;gene_id=HG002_chrY_G0000021;Parent=HG002_chrY_T0000071;transcript_name=HG002_chrY_T0000071;gene_name=ENSG00000310544;ID=exon:HG002_chrY_T0000071:0;Name=ENSG00000310544;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1109626	1122699	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850705.1;transcript_score=249.621;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=HG002_chrY_T0000071;gene_id=HG002_chrY_G0000021;Parent=HG002_chrY_T0000071;transcript_name=HG002_chrY_T0000071;gene_name=ENSG00000310544;ID=intron:HG002_chrY_T0000071:0;Name=ENSG00000310544;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1122700	1122770	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850705.1;transcript_score=249.621;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=HG002_chrY_T0000071;gene_id=HG002_chrY_G0000021;Parent=HG002_chrY_T0000071;transcript_name=HG002_chrY_T0000071;gene_name=ENSG00000310544;ID=exon:HG002_chrY_T0000071:1;Name=ENSG00000310544;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1122771	1123368	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850705.1;transcript_score=249.621;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=HG002_chrY_T0000071;gene_id=HG002_chrY_G0000021;Parent=HG002_chrY_T0000071;transcript_name=HG002_chrY_T0000071;gene_name=ENSG00000310544;ID=intron:HG002_chrY_T0000071:1;Name=ENSG00000310544;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1123369	1124211	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850705.1;transcript_score=249.621;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=HG002_chrY_T0000071;gene_id=HG002_chrY_G0000021;Parent=HG002_chrY_T0000071;transcript_name=HG002_chrY_T0000071;gene_name=ENSG00000310544;ID=exon:HG002_chrY_T0000071:2;Name=ENSG00000310544;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1108691	1124211	1000	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000850705.1;transcript_score=249.621;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=HG002_chrY_T0000072;gene_id=HG002_chrY_G0000021;Parent=HG002_chrY_G0000021;transcript_name=HG002_chrY_T0000072;gene_name=ENSG00000310544;ID=HG002_chrY_T0000072;Name=ENSG00000310544
HG002_chrY	CAT	exon	1108691	1109625	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000850705.1;transcript_score=249.621;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=HG002_chrY_T0000072;gene_id=HG002_chrY_G0000021;Parent=HG002_chrY_T0000072;transcript_name=HG002_chrY_T0000072;gene_name=ENSG00000310544;ID=exon:HG002_chrY_T0000072:0;Name=ENSG00000310544;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1109626	1122699	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000850705.1;transcript_score=249.621;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=HG002_chrY_T0000072;gene_id=HG002_chrY_G0000021;Parent=HG002_chrY_T0000072;transcript_name=HG002_chrY_T0000072;gene_name=ENSG00000310544;ID=intron:HG002_chrY_T0000072:0;Name=ENSG00000310544;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1122700	1122746	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000850705.1;transcript_score=249.621;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=HG002_chrY_T0000072;gene_id=HG002_chrY_G0000021;Parent=HG002_chrY_T0000072;transcript_name=HG002_chrY_T0000072;gene_name=ENSG00000310544;ID=exon:HG002_chrY_T0000072:1;Name=ENSG00000310544;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1122747	1123344	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000850705.1;transcript_score=249.621;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=HG002_chrY_T0000072;gene_id=HG002_chrY_G0000021;Parent=HG002_chrY_T0000072;transcript_name=HG002_chrY_T0000072;gene_name=ENSG00000310544;ID=intron:HG002_chrY_T0000072:1;Name=ENSG00000310544;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1123345	1124211	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000850705.1;transcript_score=249.621;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=HG002_chrY_T0000072;gene_id=HG002_chrY_G0000021;Parent=HG002_chrY_T0000072;transcript_name=HG002_chrY_T0000072;gene_name=ENSG00000310544;ID=exon:HG002_chrY_T0000072:2;Name=ENSG00000310544;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1108691	1124211	1000	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850705.1;transcript_score=249.621;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=HG002_chrY_T0000073;gene_id=HG002_chrY_G0000021;Parent=HG002_chrY_G0000021;transcript_name=HG002_chrY_T0000073;gene_name=ENSG00000310544;ID=HG002_chrY_T0000073;Name=ENSG00000310544
HG002_chrY	CAT	exon	1108691	1109625	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850705.1;transcript_score=249.621;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=HG002_chrY_T0000073;gene_id=HG002_chrY_G0000021;Parent=HG002_chrY_T0000073;transcript_name=HG002_chrY_T0000073;gene_name=ENSG00000310544;ID=exon:HG002_chrY_T0000073:0;Name=ENSG00000310544;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1109626	1122699	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850705.1;transcript_score=249.621;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=HG002_chrY_T0000073;gene_id=HG002_chrY_G0000021;Parent=HG002_chrY_T0000073;transcript_name=HG002_chrY_T0000073;gene_name=ENSG00000310544;ID=intron:HG002_chrY_T0000073:0;Name=ENSG00000310544;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1122700	1124211	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850705.1;transcript_score=249.621;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=HG002_chrY_T0000073;gene_id=HG002_chrY_G0000021;Parent=HG002_chrY_T0000073;transcript_name=HG002_chrY_T0000073;gene_name=ENSG00000310544;ID=exon:HG002_chrY_T0000073:1;Name=ENSG00000310544;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1109497	1115269	1000	+	.	source_transcript=ENST00000850706.1;source_transcript_name=ENST00000850706;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850706.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;alternative_source_transcripts=ENST00000850706.1,ENST00000850706.1;transcript_id=HG002_chrY_T0000074;gene_id=HG002_chrY_G0000021;Parent=HG002_chrY_G0000021;transcript_name=HG002_chrY_T0000074;gene_name=ENSG00000310544;ID=HG002_chrY_T0000074;Name=ENSG00000310544
HG002_chrY	CAT	exon	1109497	1109625	.	+	.	source_transcript=ENST00000850706.1;source_transcript_name=ENST00000850706;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850706.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;alternative_source_transcripts=ENST00000850706.1,ENST00000850706.1;transcript_id=HG002_chrY_T0000074;gene_id=HG002_chrY_G0000021;Parent=HG002_chrY_T0000074;transcript_name=HG002_chrY_T0000074;gene_name=ENSG00000310544;ID=exon:HG002_chrY_T0000074:0;Name=ENSG00000310544;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1109626	1115004	.	+	.	source_transcript=ENST00000850706.1;source_transcript_name=ENST00000850706;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850706.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;alternative_source_transcripts=ENST00000850706.1,ENST00000850706.1;transcript_id=HG002_chrY_T0000074;gene_id=HG002_chrY_G0000021;Parent=HG002_chrY_T0000074;transcript_name=HG002_chrY_T0000074;gene_name=ENSG00000310544;ID=intron:HG002_chrY_T0000074:0;Name=ENSG00000310544;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1115005	1115269	.	+	.	source_transcript=ENST00000850706.1;source_transcript_name=ENST00000850706;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850706.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;alternative_source_transcripts=ENST00000850706.1,ENST00000850706.1;transcript_id=HG002_chrY_T0000074;gene_id=HG002_chrY_G0000021;Parent=HG002_chrY_T0000074;transcript_name=HG002_chrY_T0000074;gene_name=ENSG00000310544;ID=exon:HG002_chrY_T0000074:1;Name=ENSG00000310544;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	1129404	1189402	.	+	.	source_gene_common_name=CSF2RA;source_gene=ENSG00000292357.2;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;gene_id=HG002_chrY_G0000022;gene_biotype=protein_coding;gene_name=CSF2RA;gene_sources=liftoff,transMap_pairwise;ID=HG002_chrY_G0000022;Name=CSF2RA
HG002_chrY	CAT	transcript	1129404	1189402	100	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_G0000022;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=HG002_chrY_T0000075;Name=CSF2RA
HG002_chrY	CAT	exon	1129404	1129490	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000075:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1129491	1137193	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000075:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1137194	1137257	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000075:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1137258	1145154	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000075:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1145155	1145256	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000075:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1145181	1145256	.	+	0	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000075:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1145181	1145183	.	+	0	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=start_codon:HG002_chrY_T0000075;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1145257	1148243	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000075:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1148244	1148386	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000075:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1148244	1148386	.	+	2	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000075:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1148387	1150976	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000075:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1150977	1151100	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000075:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1150977	1151100	.	+	0	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000075:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151101	1151216	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000075:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1151217	1151346	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000075:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1151217	1151346	.	+	2	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000075:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151347	1152792	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000075:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1152793	1152965	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000075:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1152793	1152965	.	+	1	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000075:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1152966	1157081	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000075:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1157082	1157215	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000075:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1157082	1157215	.	+	2	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000075:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1157216	1158180	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000075:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1158181	1158210	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000075:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1158181	1158210	.	+	0	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000075:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1158211	1164384	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000075:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1164385	1164520	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000075:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1164385	1164520	.	+	0	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000075:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1164521	1167817	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000075:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1167818	1167914	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000075:10;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1167818	1167914	.	+	2	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000075:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1167915	1169340	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000075:10;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1169341	1169422	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000075:11;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1169341	1169422	.	+	1	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000075:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1169423	1189056	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000075:11;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1189057	1189402	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000075:12;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1189057	1189092	.	+	0	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000075:10;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1189090	1189092	.	+	0	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG002_chrY_T0000075;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000075;transcript_name=HG002_chrY_T0000075;gene_name=CSF2RA;ID=stop_codon:HG002_chrY_T0000075;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1129411	1174184	100	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_G0000022;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=HG002_chrY_T0000076;Name=CSF2RA
HG002_chrY	CAT	exon	1129411	1129490	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000076:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1129491	1137193	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000076:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1137194	1137281	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000076:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1137282	1145154	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000076:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1145155	1145256	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000076:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1145181	1145256	.	+	0	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000076:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1145181	1145183	.	+	0	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=start_codon:HG002_chrY_T0000076;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1145257	1148243	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000076:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1148244	1148386	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000076:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1148244	1148386	.	+	2	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000076:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1148387	1150976	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000076:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1150977	1151100	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000076:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1150977	1151100	.	+	0	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000076:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151101	1151216	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000076:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1151217	1151346	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000076:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1151217	1151346	.	+	2	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000076:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151347	1152792	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000076:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1152793	1152965	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000076:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1152793	1152965	.	+	1	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000076:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1152966	1157081	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000076:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1157082	1157215	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000076:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1157082	1157215	.	+	2	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000076:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1157216	1158180	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000076:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1158181	1158210	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000076:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1158181	1158210	.	+	0	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000076:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1158211	1164384	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000076:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1164385	1164520	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000076:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1164385	1164520	.	+	0	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000076:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1164521	1167155	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000076:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1167156	1167257	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000076:10;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1167156	1167257	.	+	2	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000076:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1167258	1167817	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000076:10;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1167818	1167914	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000076:11;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1167818	1167914	.	+	2	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000076:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1167915	1169340	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000076:11;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1169341	1169422	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000076:12;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1169341	1169422	.	+	1	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000076:10;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1169423	1173651	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000076:12;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1173652	1174184	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000076:13;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1173652	1173729	.	+	0	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000076:11;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1173727	1173729	.	+	0	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG002_chrY_T0000076;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000076;transcript_name=HG002_chrY_T0000076;gene_name=CSF2RA;ID=stop_codon:HG002_chrY_T0000076;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1129419	1174631	100	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_G0000022;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=HG002_chrY_T0000077;Name=CSF2RA
HG002_chrY	CAT	exon	1129419	1129490	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000077:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1129491	1137193	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000077:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1137194	1137281	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000077:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1137282	1145154	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000077:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1145155	1145256	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000077:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1145181	1145256	.	+	0	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000077:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1145181	1145183	.	+	0	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=start_codon:HG002_chrY_T0000077;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1145257	1148243	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000077:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1148244	1148386	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000077:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1148244	1148386	.	+	2	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000077:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1148387	1150976	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000077:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1150977	1151100	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000077:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1150977	1151100	.	+	0	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000077:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151101	1151216	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000077:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1151217	1151346	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000077:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1151217	1151346	.	+	2	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000077:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151347	1152792	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000077:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1152793	1152965	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000077:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1152793	1152965	.	+	1	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000077:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1152966	1157081	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000077:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1157082	1157215	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000077:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1157082	1157215	.	+	2	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000077:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1157216	1158180	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000077:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1158181	1158210	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000077:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1158181	1158210	.	+	0	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000077:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1158211	1164384	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000077:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1164385	1164520	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000077:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1164385	1164520	.	+	0	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000077:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1164521	1167817	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000077:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1167818	1167914	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000077:10;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1167818	1167914	.	+	2	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000077:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1167915	1169340	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000077:10;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1169341	1169422	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000077:11;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1169341	1169422	.	+	1	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000077:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1169423	1173651	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000077:11;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1173652	1174631	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000077:12;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1173652	1173729	.	+	0	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000077:10;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1173727	1173729	.	+	0	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG002_chrY_T0000077;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000077;transcript_name=HG002_chrY_T0000077;gene_name=CSF2RA;ID=stop_codon:HG002_chrY_T0000077;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1129425	1174185	100	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_G0000022;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=HG002_chrY_T0000078;Name=CSF2RA
HG002_chrY	CAT	exon	1129425	1129490	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000078:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1129491	1137193	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000078:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1137194	1137257	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000078:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1137258	1145154	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000078:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1145155	1145256	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000078:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1145181	1145256	.	+	0	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000078:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1145181	1145183	.	+	0	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=start_codon:HG002_chrY_T0000078;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1145257	1148243	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000078:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1148244	1148386	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000078:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1148244	1148386	.	+	2	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000078:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1148387	1150976	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000078:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1150977	1151100	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000078:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1150977	1151100	.	+	0	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000078:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151101	1151216	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000078:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1151217	1151346	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000078:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1151217	1151346	.	+	2	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000078:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151347	1152792	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000078:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1152793	1152965	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000078:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1152793	1152965	.	+	1	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000078:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1152966	1157081	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000078:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1157082	1157215	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000078:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1157082	1157215	.	+	2	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000078:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1157216	1158180	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000078:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1158181	1158210	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000078:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1158181	1158210	.	+	0	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000078:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1158211	1164384	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000078:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1164385	1164520	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000078:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1164385	1164520	.	+	0	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000078:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1164521	1167817	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000078:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1167818	1167914	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000078:10;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1167818	1167914	.	+	2	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000078:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1167915	1169340	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000078:10;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1169341	1169422	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000078:11;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1169341	1169422	.	+	1	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000078:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1169423	1173651	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000078:11;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1173652	1174185	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000078:12;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1173652	1173729	.	+	0	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000078:10;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1173727	1173729	.	+	0	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG002_chrY_T0000078;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000078;transcript_name=HG002_chrY_T0000078;gene_name=CSF2RA;ID=stop_codon:HG002_chrY_T0000078;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1129425	1173968	1000	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG002_chrY_T0000079;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_G0000022;transcript_name=HG002_chrY_T0000079;gene_name=CSF2RA;ID=HG002_chrY_T0000079;Name=CSF2RA
HG002_chrY	CAT	exon	1129425	1129490	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG002_chrY_T0000079;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000079;transcript_name=HG002_chrY_T0000079;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000079:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1129491	1137193	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG002_chrY_T0000079;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000079;transcript_name=HG002_chrY_T0000079;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000079:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1137194	1137281	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG002_chrY_T0000079;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000079;transcript_name=HG002_chrY_T0000079;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000079:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1137282	1145154	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG002_chrY_T0000079;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000079;transcript_name=HG002_chrY_T0000079;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000079:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1145155	1145519	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG002_chrY_T0000079;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000079;transcript_name=HG002_chrY_T0000079;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000079:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1145181	1145360	.	+	0	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG002_chrY_T0000079;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000079;transcript_name=HG002_chrY_T0000079;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000079:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1145181	1145183	.	+	0	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG002_chrY_T0000079;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000079;transcript_name=HG002_chrY_T0000079;gene_name=CSF2RA;ID=start_codon:HG002_chrY_T0000079;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1145358	1145360	.	+	0	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG002_chrY_T0000079;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000079;transcript_name=HG002_chrY_T0000079;gene_name=CSF2RA;ID=stop_codon:HG002_chrY_T0000079;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1145520	1148243	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG002_chrY_T0000079;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000079;transcript_name=HG002_chrY_T0000079;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000079:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1148244	1148386	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG002_chrY_T0000079;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000079;transcript_name=HG002_chrY_T0000079;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000079:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1148387	1150976	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG002_chrY_T0000079;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000079;transcript_name=HG002_chrY_T0000079;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000079:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1150977	1151100	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG002_chrY_T0000079;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000079;transcript_name=HG002_chrY_T0000079;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000079:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151101	1151216	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG002_chrY_T0000079;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000079;transcript_name=HG002_chrY_T0000079;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000079:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1151217	1151346	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG002_chrY_T0000079;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000079;transcript_name=HG002_chrY_T0000079;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000079:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151347	1152792	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG002_chrY_T0000079;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000079;transcript_name=HG002_chrY_T0000079;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000079:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1152793	1152965	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG002_chrY_T0000079;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000079;transcript_name=HG002_chrY_T0000079;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000079:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1152966	1157081	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG002_chrY_T0000079;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000079;transcript_name=HG002_chrY_T0000079;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000079:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1157082	1157215	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG002_chrY_T0000079;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000079;transcript_name=HG002_chrY_T0000079;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000079:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1157216	1158180	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG002_chrY_T0000079;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000079;transcript_name=HG002_chrY_T0000079;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000079:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1158181	1158210	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG002_chrY_T0000079;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000079;transcript_name=HG002_chrY_T0000079;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000079:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1158211	1164384	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG002_chrY_T0000079;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000079;transcript_name=HG002_chrY_T0000079;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000079:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1164385	1164520	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG002_chrY_T0000079;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000079;transcript_name=HG002_chrY_T0000079;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000079:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1164521	1167155	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG002_chrY_T0000079;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000079;transcript_name=HG002_chrY_T0000079;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000079:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1167156	1167257	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG002_chrY_T0000079;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000079;transcript_name=HG002_chrY_T0000079;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000079:10;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1167258	1167817	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG002_chrY_T0000079;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000079;transcript_name=HG002_chrY_T0000079;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000079:10;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1167818	1167914	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG002_chrY_T0000079;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000079;transcript_name=HG002_chrY_T0000079;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000079:11;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1167915	1169340	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG002_chrY_T0000079;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000079;transcript_name=HG002_chrY_T0000079;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000079:11;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1169341	1169422	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG002_chrY_T0000079;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000079;transcript_name=HG002_chrY_T0000079;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000079:12;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1169423	1173651	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG002_chrY_T0000079;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000079;transcript_name=HG002_chrY_T0000079;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000079:12;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1173652	1173968	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG002_chrY_T0000079;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000079;transcript_name=HG002_chrY_T0000079;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000079:13;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1129425	1164437	1000	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG002_chrY_T0000080;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_G0000022;transcript_name=HG002_chrY_T0000080;gene_name=CSF2RA;ID=HG002_chrY_T0000080;Name=CSF2RA
HG002_chrY	CAT	exon	1129425	1129490	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG002_chrY_T0000080;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000080;transcript_name=HG002_chrY_T0000080;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000080:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1129491	1137193	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG002_chrY_T0000080;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000080;transcript_name=HG002_chrY_T0000080;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000080:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1137194	1137281	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG002_chrY_T0000080;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000080;transcript_name=HG002_chrY_T0000080;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000080:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1137282	1145154	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG002_chrY_T0000080;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000080;transcript_name=HG002_chrY_T0000080;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000080:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1145155	1145256	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG002_chrY_T0000080;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000080;transcript_name=HG002_chrY_T0000080;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000080:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1145257	1150976	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG002_chrY_T0000080;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000080;transcript_name=HG002_chrY_T0000080;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000080:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1150977	1151100	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG002_chrY_T0000080;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000080;transcript_name=HG002_chrY_T0000080;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000080:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151101	1151216	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG002_chrY_T0000080;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000080;transcript_name=HG002_chrY_T0000080;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000080:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1151217	1151346	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG002_chrY_T0000080;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000080;transcript_name=HG002_chrY_T0000080;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000080:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151347	1152792	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG002_chrY_T0000080;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000080;transcript_name=HG002_chrY_T0000080;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000080:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1152793	1152965	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG002_chrY_T0000080;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000080;transcript_name=HG002_chrY_T0000080;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000080:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1152966	1157081	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG002_chrY_T0000080;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000080;transcript_name=HG002_chrY_T0000080;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000080:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1157082	1157215	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG002_chrY_T0000080;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000080;transcript_name=HG002_chrY_T0000080;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000080:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1157216	1158180	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG002_chrY_T0000080;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000080;transcript_name=HG002_chrY_T0000080;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000080:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1158181	1158210	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG002_chrY_T0000080;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000080;transcript_name=HG002_chrY_T0000080;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000080:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1158211	1164384	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG002_chrY_T0000080;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000080;transcript_name=HG002_chrY_T0000080;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000080:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1164385	1164437	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG002_chrY_T0000080;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000080;transcript_name=HG002_chrY_T0000080;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000080:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1129429	1157149	100	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG002_chrY_T0000081;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_G0000022;transcript_name=HG002_chrY_T0000081;gene_name=CSF2RA;ID=HG002_chrY_T0000081;Name=CSF2RA
HG002_chrY	CAT	exon	1129429	1129490	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG002_chrY_T0000081;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000081;transcript_name=HG002_chrY_T0000081;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000081:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1129491	1145154	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG002_chrY_T0000081;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000081;transcript_name=HG002_chrY_T0000081;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000081:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1145155	1145256	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG002_chrY_T0000081;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000081;transcript_name=HG002_chrY_T0000081;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000081:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1145181	1145256	.	+	0	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG002_chrY_T0000081;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000081;transcript_name=HG002_chrY_T0000081;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000081:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1145181	1145183	.	+	0	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG002_chrY_T0000081;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000081;transcript_name=HG002_chrY_T0000081;gene_name=CSF2RA;ID=start_codon:HG002_chrY_T0000081;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1145257	1148243	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG002_chrY_T0000081;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000081;transcript_name=HG002_chrY_T0000081;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000081:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1148244	1148386	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG002_chrY_T0000081;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000081;transcript_name=HG002_chrY_T0000081;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000081:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1148244	1148386	.	+	2	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG002_chrY_T0000081;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000081;transcript_name=HG002_chrY_T0000081;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000081:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1148387	1150976	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG002_chrY_T0000081;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000081;transcript_name=HG002_chrY_T0000081;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000081:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1150977	1151100	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG002_chrY_T0000081;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000081;transcript_name=HG002_chrY_T0000081;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000081:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1150977	1151100	.	+	0	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG002_chrY_T0000081;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000081;transcript_name=HG002_chrY_T0000081;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000081:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151101	1151216	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG002_chrY_T0000081;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000081;transcript_name=HG002_chrY_T0000081;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000081:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1151217	1151346	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG002_chrY_T0000081;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000081;transcript_name=HG002_chrY_T0000081;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000081:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1151217	1151346	.	+	2	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG002_chrY_T0000081;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000081;transcript_name=HG002_chrY_T0000081;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000081:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151347	1152792	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG002_chrY_T0000081;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000081;transcript_name=HG002_chrY_T0000081;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000081:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1152793	1152965	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG002_chrY_T0000081;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000081;transcript_name=HG002_chrY_T0000081;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000081:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1152793	1152965	.	+	1	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG002_chrY_T0000081;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000081;transcript_name=HG002_chrY_T0000081;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000081:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1152966	1157081	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG002_chrY_T0000081;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000081;transcript_name=HG002_chrY_T0000081;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000081:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1157082	1157149	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG002_chrY_T0000081;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000081;transcript_name=HG002_chrY_T0000081;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000081:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1157082	1157149	.	+	2	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG002_chrY_T0000081;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000081;transcript_name=HG002_chrY_T0000081;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000081:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1129429	1187204	100	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_G0000022;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=HG002_chrY_T0000082;Name=CSF2RA
HG002_chrY	CAT	exon	1129429	1129490	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000082:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1129491	1137193	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000082:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1137194	1137281	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000082:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1137282	1145154	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000082:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1145155	1145256	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000082:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1145181	1145256	.	+	0	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000082:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1145181	1145183	.	+	0	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=start_codon:HG002_chrY_T0000082;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1145257	1148243	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000082:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1148244	1148386	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000082:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1148244	1148386	.	+	2	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000082:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1148387	1150976	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000082:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1150977	1151100	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000082:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1150977	1151100	.	+	0	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000082:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151101	1151216	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000082:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1151217	1151346	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000082:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1151217	1151346	.	+	2	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000082:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151347	1152792	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000082:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1152793	1152965	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000082:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1152793	1152965	.	+	1	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000082:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1152966	1157081	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000082:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1157082	1157215	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000082:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1157082	1157215	.	+	2	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000082:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1157216	1158180	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000082:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1158181	1158210	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000082:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1158181	1158210	.	+	0	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000082:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1158211	1164384	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000082:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1164385	1164520	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000082:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1164385	1164520	.	+	0	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000082:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1164521	1167817	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000082:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1167818	1167914	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000082:10;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1167818	1167914	.	+	2	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000082:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1167915	1169340	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000082:10;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1169341	1169422	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000082:11;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1169341	1169422	.	+	1	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000082:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1169423	1186494	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000082:11;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1186495	1186517	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000082:12;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1186495	1186517	.	+	0	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000082:10;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1186518	1186849	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000082:12;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1186850	1187204	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000082:13;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1186850	1186997	.	+	1	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000082:11;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1186995	1186997	.	+	0	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG002_chrY_T0000082;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000082;transcript_name=HG002_chrY_T0000082;gene_name=CSF2RA;ID=stop_codon:HG002_chrY_T0000082;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1129441	1174174	100	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_G0000022;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=HG002_chrY_T0000083;Name=CSF2RA
HG002_chrY	CAT	exon	1129441	1129490	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000083:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1129491	1137193	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000083:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1137194	1137257	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000083:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1137258	1144885	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000083:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1144886	1145037	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000083:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1145038	1145154	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000083:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1145155	1145256	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000083:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1145181	1145256	.	+	0	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000083:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1145181	1145183	.	+	0	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=start_codon:HG002_chrY_T0000083;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1145257	1148243	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000083:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1148244	1148386	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000083:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1148244	1148386	.	+	2	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000083:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1148387	1150976	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000083:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1150977	1151100	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000083:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1150977	1151100	.	+	0	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000083:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151101	1151216	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000083:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1151217	1151346	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000083:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1151217	1151346	.	+	2	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000083:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151347	1152792	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000083:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1152793	1152965	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000083:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1152793	1152965	.	+	1	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000083:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1152966	1157081	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000083:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1157082	1157215	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000083:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1157082	1157215	.	+	2	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000083:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1157216	1158180	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000083:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1158181	1158210	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000083:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1158181	1158210	.	+	0	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000083:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1158211	1164384	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000083:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1164385	1164520	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000083:10;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1164385	1164520	.	+	0	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000083:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1164521	1167817	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000083:10;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1167818	1167914	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000083:11;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1167818	1167914	.	+	2	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000083:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1167915	1169340	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000083:11;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1169341	1169422	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000083:12;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1169341	1169422	.	+	1	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000083:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1169423	1173651	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000083:12;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1173652	1174174	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000083:13;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1173652	1173729	.	+	0	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000083:10;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1173727	1173729	.	+	0	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG002_chrY_T0000083;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000083;transcript_name=HG002_chrY_T0000083;gene_name=CSF2RA;ID=stop_codon:HG002_chrY_T0000083;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1129443	1169836	100	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_G0000022;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=HG002_chrY_T0000084;Name=CSF2RA
HG002_chrY	CAT	exon	1129443	1129490	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000084:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1129491	1137193	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000084:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1137194	1137281	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000084:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1137282	1145154	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000084:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1145155	1145256	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000084:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1145181	1145256	.	+	0	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000084:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1145181	1145183	.	+	0	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=start_codon:HG002_chrY_T0000084;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1145257	1148243	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000084:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1148244	1148386	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000084:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1148244	1148386	.	+	2	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000084:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1148387	1150976	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000084:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1150977	1151100	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000084:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1150977	1151100	.	+	0	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000084:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151101	1151216	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000084:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1151217	1151346	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000084:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1151217	1151346	.	+	2	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000084:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151347	1152792	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000084:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1152793	1152965	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000084:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1152793	1152965	.	+	1	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000084:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1152966	1157081	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000084:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1157082	1157215	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000084:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1157082	1157215	.	+	2	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000084:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1157216	1158180	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000084:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1158181	1158210	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000084:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1158181	1158210	.	+	0	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000084:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1158211	1164384	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000084:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1164385	1164520	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000084:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1164385	1164520	.	+	0	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000084:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1164521	1167817	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000084:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1167818	1167914	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000084:10;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1167818	1167914	.	+	2	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000084:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1167915	1169340	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000084:10;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1169341	1169422	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000084:11;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1169341	1169422	.	+	1	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000084:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1169423	1169522	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000084:11;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1169523	1169836	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000084:12;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1169523	1169630	.	+	0	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000084:10;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1169628	1169630	.	+	0	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG002_chrY_T0000084;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000084;transcript_name=HG002_chrY_T0000084;gene_name=CSF2RA;ID=stop_codon:HG002_chrY_T0000084;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1129443	1174172	100	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG002_chrY_T0000085;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_G0000022;transcript_name=HG002_chrY_T0000085;gene_name=CSF2RA;ID=HG002_chrY_T0000085;Name=CSF2RA
HG002_chrY	CAT	exon	1129443	1129490	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG002_chrY_T0000085;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000085;transcript_name=HG002_chrY_T0000085;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000085:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1129491	1137193	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG002_chrY_T0000085;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000085;transcript_name=HG002_chrY_T0000085;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000085:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1137194	1137281	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG002_chrY_T0000085;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000085;transcript_name=HG002_chrY_T0000085;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000085:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1137282	1145154	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG002_chrY_T0000085;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000085;transcript_name=HG002_chrY_T0000085;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000085:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1145155	1145256	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG002_chrY_T0000085;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000085;transcript_name=HG002_chrY_T0000085;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000085:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1145181	1145256	.	+	0	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG002_chrY_T0000085;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000085;transcript_name=HG002_chrY_T0000085;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000085:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1145181	1145183	.	+	0	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG002_chrY_T0000085;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000085;transcript_name=HG002_chrY_T0000085;gene_name=CSF2RA;ID=start_codon:HG002_chrY_T0000085;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1145257	1148243	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG002_chrY_T0000085;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000085;transcript_name=HG002_chrY_T0000085;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000085:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1148244	1148386	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG002_chrY_T0000085;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000085;transcript_name=HG002_chrY_T0000085;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000085:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1148244	1148386	.	+	2	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG002_chrY_T0000085;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000085;transcript_name=HG002_chrY_T0000085;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000085:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1148387	1149631	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG002_chrY_T0000085;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000085;transcript_name=HG002_chrY_T0000085;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000085:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1149632	1149656	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG002_chrY_T0000085;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000085;transcript_name=HG002_chrY_T0000085;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000085:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1149632	1149656	.	+	0	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG002_chrY_T0000085;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000085;transcript_name=HG002_chrY_T0000085;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000085:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1149657	1174089	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG002_chrY_T0000085;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000085;transcript_name=HG002_chrY_T0000085;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000085:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1174090	1174172	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG002_chrY_T0000085;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000085;transcript_name=HG002_chrY_T0000085;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000085:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1174090	1174118	.	+	2	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG002_chrY_T0000085;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000085;transcript_name=HG002_chrY_T0000085;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000085:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1174116	1174118	.	+	0	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG002_chrY_T0000085;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000085;transcript_name=HG002_chrY_T0000085;gene_name=CSF2RA;ID=stop_codon:HG002_chrY_T0000085;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1129445	1187223	100	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_G0000022;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=HG002_chrY_T0000086;Name=CSF2RA
HG002_chrY	CAT	exon	1129445	1129490	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000086:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1129491	1137193	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000086:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1137194	1137281	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000086:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1137282	1145154	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000086:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1145155	1145256	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000086:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1145181	1145256	.	+	0	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000086:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1145181	1145183	.	+	0	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=start_codon:HG002_chrY_T0000086;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1145257	1148243	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000086:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1148244	1148386	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000086:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1148244	1148386	.	+	2	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000086:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1148387	1150976	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000086:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1150977	1151100	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000086:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1150977	1151100	.	+	0	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000086:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151101	1151216	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000086:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1151217	1151346	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000086:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1151217	1151346	.	+	2	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000086:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151347	1152792	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000086:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1152793	1152965	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000086:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1152793	1152965	.	+	1	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000086:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1152966	1157081	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000086:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1157082	1157215	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000086:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1157082	1157215	.	+	2	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000086:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1157216	1158180	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000086:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1158181	1158210	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000086:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1158181	1158210	.	+	0	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000086:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1158211	1164384	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000086:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1164385	1164520	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000086:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1164385	1164520	.	+	0	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000086:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1164521	1167817	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000086:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1167818	1167914	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000086:10;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1167818	1167914	.	+	2	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000086:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1167915	1169340	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000086:10;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1169341	1169422	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000086:11;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1169341	1169422	.	+	1	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000086:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1169423	1186494	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000086:11;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1186495	1187223	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000086:12;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1186495	1186521	.	+	0	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000086:10;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1186519	1186521	.	+	0	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG002_chrY_T0000086;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000086;transcript_name=HG002_chrY_T0000086;gene_name=CSF2RA;ID=stop_codon:HG002_chrY_T0000086;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1129445	1189245	100	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_G0000022;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=HG002_chrY_T0000087;Name=CSF2RA
HG002_chrY	CAT	exon	1129445	1129490	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000087:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1129491	1137193	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000087:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1137194	1137281	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000087:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1137282	1145154	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000087:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1145155	1145256	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000087:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1145181	1145256	.	+	0	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000087:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1145181	1145183	.	+	0	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=start_codon:HG002_chrY_T0000087;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1145257	1148243	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000087:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1148244	1148386	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000087:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1148244	1148386	.	+	2	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000087:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1148387	1150976	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000087:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1150977	1151100	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000087:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1150977	1151100	.	+	0	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000087:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151101	1151216	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000087:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1151217	1151346	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000087:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1151217	1151346	.	+	2	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000087:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151347	1152792	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000087:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1152793	1152965	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000087:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1152793	1152965	.	+	1	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000087:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1152966	1157081	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000087:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1157082	1157215	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000087:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1157082	1157215	.	+	2	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000087:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1157216	1158180	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000087:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1158181	1158210	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000087:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1158181	1158210	.	+	0	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000087:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1158211	1164384	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000087:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1164385	1164520	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000087:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1164385	1164520	.	+	0	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000087:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1164521	1167817	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000087:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1167818	1167914	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000087:10;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1167818	1167914	.	+	2	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000087:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1167915	1169340	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000087:10;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1169341	1169422	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000087:11;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1169341	1169422	.	+	1	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000087:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1169423	1189056	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000087:11;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1189057	1189245	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000087:12;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1189057	1189092	.	+	0	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000087:10;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1189090	1189092	.	+	0	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG002_chrY_T0000087;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000087;transcript_name=HG002_chrY_T0000087;gene_name=CSF2RA;ID=stop_codon:HG002_chrY_T0000087;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1129446	1144697	1000	+	.	source_transcript=ENST00000711222.1;source_transcript_name=CSF2RA-232;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711222.1;transcript_score=299.56399999999996;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711222.1,ENST00000711222.1;transcript_id=HG002_chrY_T0000088;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_G0000022;transcript_name=HG002_chrY_T0000088;gene_name=CSF2RA;ID=HG002_chrY_T0000088;Name=CSF2RA
HG002_chrY	CAT	exon	1129446	1129490	.	+	.	source_transcript=ENST00000711222.1;source_transcript_name=CSF2RA-232;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711222.1;transcript_score=299.56399999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711222.1,ENST00000711222.1;transcript_id=HG002_chrY_T0000088;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000088;transcript_name=HG002_chrY_T0000088;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000088:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1129491	1137193	.	+	.	source_transcript=ENST00000711222.1;source_transcript_name=CSF2RA-232;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711222.1;transcript_score=299.56399999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711222.1,ENST00000711222.1;transcript_id=HG002_chrY_T0000088;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000088;transcript_name=HG002_chrY_T0000088;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000088:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1137194	1137257	.	+	.	source_transcript=ENST00000711222.1;source_transcript_name=CSF2RA-232;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711222.1;transcript_score=299.56399999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711222.1,ENST00000711222.1;transcript_id=HG002_chrY_T0000088;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000088;transcript_name=HG002_chrY_T0000088;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000088:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1137258	1144343	.	+	.	source_transcript=ENST00000711222.1;source_transcript_name=CSF2RA-232;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711222.1;transcript_score=299.56399999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711222.1,ENST00000711222.1;transcript_id=HG002_chrY_T0000088;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000088;transcript_name=HG002_chrY_T0000088;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000088:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1144344	1144697	.	+	.	source_transcript=ENST00000711222.1;source_transcript_name=CSF2RA-232;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711222.1;transcript_score=299.56399999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711222.1,ENST00000711222.1;transcript_id=HG002_chrY_T0000088;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000088;transcript_name=HG002_chrY_T0000088;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000088:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1129456	1174184	100	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_G0000022;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=HG002_chrY_T0000089;Name=CSF2RA
HG002_chrY	CAT	exon	1129456	1129490	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000089;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000089:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1129491	1137193	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000089;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000089:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1137194	1137281	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000089;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000089:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1137282	1145154	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000089;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000089:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1145155	1145256	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000089;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000089:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1145181	1145256	.	+	0	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000089;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000089:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1145181	1145183	.	+	0	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000089;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=start_codon:HG002_chrY_T0000089;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1145257	1148243	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000089;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000089:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1148244	1148386	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000089;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000089:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1148244	1148386	.	+	2	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000089;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000089:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1148387	1150976	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000089;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000089:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1150977	1151100	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000089;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000089:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1150977	1151100	.	+	0	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000089;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000089:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151101	1151216	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000089;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000089:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1151217	1151346	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000089;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000089:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1151217	1151346	.	+	2	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000089;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000089:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151347	1152792	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000089;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000089:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1152793	1152965	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000089;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000089:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1152793	1152965	.	+	1	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000089;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000089:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1152966	1157081	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000089;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000089:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1157082	1157215	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000089;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000089:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1157082	1157215	.	+	2	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000089;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000089:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1157216	1158180	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000089;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000089:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1158181	1158210	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000089;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000089:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1158181	1158210	.	+	0	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000089;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000089:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1158211	1164384	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000089;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000089:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1164385	1164520	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000089;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000089:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1164385	1164520	.	+	0	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000089;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000089:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1164521	1173651	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000089;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000089:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1173652	1174184	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000089;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000089:10;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1173652	1173839	.	+	2	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000089;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000089:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1173837	1173839	.	+	0	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG002_chrY_T0000089;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000089;transcript_name=HG002_chrY_T0000089;gene_name=CSF2RA;ID=stop_codon:HG002_chrY_T0000089;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1129456	1174184	100	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG002_chrY_T0000090;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_G0000022;transcript_name=HG002_chrY_T0000090;gene_name=CSF2RA;ID=HG002_chrY_T0000090;Name=CSF2RA
HG002_chrY	CAT	exon	1129456	1129490	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG002_chrY_T0000090;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000090;transcript_name=HG002_chrY_T0000090;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000090:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1129491	1137193	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG002_chrY_T0000090;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000090;transcript_name=HG002_chrY_T0000090;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000090:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1137194	1137281	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG002_chrY_T0000090;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000090;transcript_name=HG002_chrY_T0000090;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000090:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1137282	1145154	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG002_chrY_T0000090;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000090;transcript_name=HG002_chrY_T0000090;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000090:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1145155	1145256	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG002_chrY_T0000090;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000090;transcript_name=HG002_chrY_T0000090;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000090:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1145181	1145256	.	+	0	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG002_chrY_T0000090;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000090;transcript_name=HG002_chrY_T0000090;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000090:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1145181	1145183	.	+	0	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG002_chrY_T0000090;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000090;transcript_name=HG002_chrY_T0000090;gene_name=CSF2RA;ID=start_codon:HG002_chrY_T0000090;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1145257	1148243	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG002_chrY_T0000090;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000090;transcript_name=HG002_chrY_T0000090;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000090:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1148244	1148386	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG002_chrY_T0000090;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000090;transcript_name=HG002_chrY_T0000090;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000090:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1148244	1148386	.	+	2	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG002_chrY_T0000090;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000090;transcript_name=HG002_chrY_T0000090;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000090:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1148387	1150976	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG002_chrY_T0000090;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000090;transcript_name=HG002_chrY_T0000090;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000090:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1150977	1151100	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG002_chrY_T0000090;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000090;transcript_name=HG002_chrY_T0000090;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000090:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1150977	1151100	.	+	0	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG002_chrY_T0000090;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000090;transcript_name=HG002_chrY_T0000090;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000090:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151101	1151216	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG002_chrY_T0000090;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000090;transcript_name=HG002_chrY_T0000090;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000090:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1151217	1151346	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG002_chrY_T0000090;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000090;transcript_name=HG002_chrY_T0000090;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000090:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1151217	1151346	.	+	2	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG002_chrY_T0000090;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000090;transcript_name=HG002_chrY_T0000090;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000090:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151347	1152792	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG002_chrY_T0000090;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000090;transcript_name=HG002_chrY_T0000090;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000090:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1152793	1152965	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG002_chrY_T0000090;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000090;transcript_name=HG002_chrY_T0000090;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000090:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1152793	1152965	.	+	1	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG002_chrY_T0000090;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000090;transcript_name=HG002_chrY_T0000090;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000090:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1152966	1169340	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG002_chrY_T0000090;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000090;transcript_name=HG002_chrY_T0000090;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000090:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1169341	1169422	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG002_chrY_T0000090;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000090;transcript_name=HG002_chrY_T0000090;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000090:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1169341	1169396	.	+	2	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG002_chrY_T0000090;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000090;transcript_name=HG002_chrY_T0000090;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000090:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1169394	1169396	.	+	0	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG002_chrY_T0000090;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000090;transcript_name=HG002_chrY_T0000090;gene_name=CSF2RA;ID=stop_codon:HG002_chrY_T0000090;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1169423	1173651	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG002_chrY_T0000090;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000090;transcript_name=HG002_chrY_T0000090;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000090:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1173652	1174184	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG002_chrY_T0000090;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000090;transcript_name=HG002_chrY_T0000090;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000090:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1129456	1174184	1000	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_G0000022;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=HG002_chrY_T0000091;Name=CSF2RA
HG002_chrY	CAT	exon	1129456	1129490	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000091:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1129491	1137193	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000091:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1137194	1137281	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000091:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1137282	1145154	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000091:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1145155	1145256	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000091:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1145181	1145256	.	+	0	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000091:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1145181	1145183	.	+	0	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=start_codon:HG002_chrY_T0000091;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1145257	1148243	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000091:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1148244	1148386	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000091:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1148244	1148386	.	+	2	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000091:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1148387	1150976	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000091:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1150977	1151100	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000091:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1150977	1151100	.	+	0	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000091:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151101	1151216	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000091:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1151217	1151346	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000091:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1151217	1151346	.	+	2	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000091:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151347	1152792	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000091:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1152793	1152965	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000091:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1152793	1152965	.	+	1	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000091:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1152966	1157081	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000091:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1157082	1157215	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000091:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1157082	1157215	.	+	2	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000091:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1157216	1158180	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000091:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1158181	1158210	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000091:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1158181	1158210	.	+	0	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000091:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1158211	1167817	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000091:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1167818	1167914	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000091:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1167818	1167865	.	+	0	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000091:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1167863	1167865	.	+	0	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=stop_codon:HG002_chrY_T0000091;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1167915	1169340	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000091:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1169341	1169422	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000091:10;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1169423	1173651	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000091:10;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1173652	1174184	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG002_chrY_T0000091;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000091;transcript_name=HG002_chrY_T0000091;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000091:11;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1145163	1173888	100	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG002_chrY_T0000092;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_G0000022;transcript_name=HG002_chrY_T0000092;gene_name=CSF2RA;ID=HG002_chrY_T0000092;Name=CSF2RA
HG002_chrY	CAT	exon	1145163	1145256	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG002_chrY_T0000092;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000092;transcript_name=HG002_chrY_T0000092;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000092:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1145181	1145256	.	+	0	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG002_chrY_T0000092;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000092;transcript_name=HG002_chrY_T0000092;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000092:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1145181	1145183	.	+	0	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG002_chrY_T0000092;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000092;transcript_name=HG002_chrY_T0000092;gene_name=CSF2RA;ID=start_codon:HG002_chrY_T0000092;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1145257	1148243	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG002_chrY_T0000092;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000092;transcript_name=HG002_chrY_T0000092;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000092:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1148244	1148386	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG002_chrY_T0000092;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000092;transcript_name=HG002_chrY_T0000092;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000092:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1148244	1148386	.	+	2	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG002_chrY_T0000092;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000092;transcript_name=HG002_chrY_T0000092;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000092:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1148387	1150976	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG002_chrY_T0000092;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000092;transcript_name=HG002_chrY_T0000092;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000092:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1150977	1151100	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG002_chrY_T0000092;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000092;transcript_name=HG002_chrY_T0000092;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000092:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1150977	1151100	.	+	0	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG002_chrY_T0000092;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000092;transcript_name=HG002_chrY_T0000092;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000092:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151101	1151216	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG002_chrY_T0000092;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000092;transcript_name=HG002_chrY_T0000092;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000092:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1151217	1151346	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG002_chrY_T0000092;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000092;transcript_name=HG002_chrY_T0000092;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000092:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1151217	1151346	.	+	2	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG002_chrY_T0000092;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000092;transcript_name=HG002_chrY_T0000092;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000092:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151347	1152792	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG002_chrY_T0000092;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000092;transcript_name=HG002_chrY_T0000092;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000092:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1152793	1152965	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG002_chrY_T0000092;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000092;transcript_name=HG002_chrY_T0000092;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000092:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1152793	1152965	.	+	1	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG002_chrY_T0000092;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000092;transcript_name=HG002_chrY_T0000092;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000092:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1152966	1157081	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG002_chrY_T0000092;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000092;transcript_name=HG002_chrY_T0000092;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000092:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1157082	1157215	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG002_chrY_T0000092;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000092;transcript_name=HG002_chrY_T0000092;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000092:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1157082	1157215	.	+	2	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG002_chrY_T0000092;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000092;transcript_name=HG002_chrY_T0000092;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000092:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1157216	1158180	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG002_chrY_T0000092;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000092;transcript_name=HG002_chrY_T0000092;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000092:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1158181	1158210	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG002_chrY_T0000092;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000092;transcript_name=HG002_chrY_T0000092;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000092:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1158181	1158210	.	+	0	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG002_chrY_T0000092;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000092;transcript_name=HG002_chrY_T0000092;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000092:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1158211	1164384	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG002_chrY_T0000092;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000092;transcript_name=HG002_chrY_T0000092;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000092:6;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1164385	1164520	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG002_chrY_T0000092;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000092;transcript_name=HG002_chrY_T0000092;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000092:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1164385	1164520	.	+	0	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG002_chrY_T0000092;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000092;transcript_name=HG002_chrY_T0000092;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000092:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1164521	1169340	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG002_chrY_T0000092;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000092;transcript_name=HG002_chrY_T0000092;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000092:7;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1169341	1169422	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG002_chrY_T0000092;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000092;transcript_name=HG002_chrY_T0000092;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000092:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1169341	1169396	.	+	2	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG002_chrY_T0000092;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000092;transcript_name=HG002_chrY_T0000092;gene_name=CSF2RA;ID=CDS:HG002_chrY_T0000092:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1169394	1169396	.	+	0	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG002_chrY_T0000092;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000092;transcript_name=HG002_chrY_T0000092;gene_name=CSF2RA;ID=stop_codon:HG002_chrY_T0000092;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1169423	1173651	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG002_chrY_T0000092;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000092;transcript_name=HG002_chrY_T0000092;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000092:8;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1173652	1173888	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG002_chrY_T0000092;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000092;transcript_name=HG002_chrY_T0000092;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000092:9;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1148116	1151098	1000	+	.	source_transcript=ENST00000711227.1;source_transcript_name=CSF2RA-237;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711227.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711227.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711227.1,ENST00000711227.1;transcript_id=HG002_chrY_T0000093;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_G0000022;transcript_name=HG002_chrY_T0000093;gene_name=CSF2RA;ID=HG002_chrY_T0000093;Name=CSF2RA
HG002_chrY	CAT	exon	1148116	1148386	.	+	.	source_transcript=ENST00000711227.1;source_transcript_name=CSF2RA-237;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711227.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711227.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711227.1,ENST00000711227.1;transcript_id=HG002_chrY_T0000093;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000093;transcript_name=HG002_chrY_T0000093;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000093:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1148387	1150976	.	+	.	source_transcript=ENST00000711227.1;source_transcript_name=CSF2RA-237;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711227.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711227.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711227.1,ENST00000711227.1;transcript_id=HG002_chrY_T0000093;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000093;transcript_name=HG002_chrY_T0000093;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000093:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1150977	1151098	.	+	.	source_transcript=ENST00000711227.1;source_transcript_name=CSF2RA-237;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711227.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711227.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711227.1,ENST00000711227.1;transcript_id=HG002_chrY_T0000093;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000093;transcript_name=HG002_chrY_T0000093;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000093:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1151056	1151563	1000	+	.	source_transcript=ENST00000711228.1;source_transcript_name=CSF2RA-238;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711228.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711228.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711228.1,ENST00000711228.1;transcript_id=HG002_chrY_T0000094;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_G0000022;transcript_name=HG002_chrY_T0000094;gene_name=CSF2RA;ID=HG002_chrY_T0000094;Name=CSF2RA
HG002_chrY	CAT	exon	1151056	1151100	.	+	.	source_transcript=ENST00000711228.1;source_transcript_name=CSF2RA-238;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711228.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711228.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711228.1,ENST00000711228.1;transcript_id=HG002_chrY_T0000094;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000094;transcript_name=HG002_chrY_T0000094;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000094:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1151101	1151216	.	+	.	source_transcript=ENST00000711228.1;source_transcript_name=CSF2RA-238;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711228.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711228.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711228.1,ENST00000711228.1;transcript_id=HG002_chrY_T0000094;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000094;transcript_name=HG002_chrY_T0000094;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000094:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1151217	1151563	.	+	.	source_transcript=ENST00000711228.1;source_transcript_name=CSF2RA-238;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711228.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711228.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711228.1,ENST00000711228.1;transcript_id=HG002_chrY_T0000094;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000094;transcript_name=HG002_chrY_T0000094;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000094:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1152909	1174172	1000	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG002_chrY_T0000095;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_G0000022;transcript_name=HG002_chrY_T0000095;gene_name=CSF2RA;ID=HG002_chrY_T0000095;Name=CSF2RA
HG002_chrY	CAT	exon	1152909	1152965	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG002_chrY_T0000095;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000095;transcript_name=HG002_chrY_T0000095;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000095:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1152966	1157081	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG002_chrY_T0000095;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000095;transcript_name=HG002_chrY_T0000095;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000095:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1157082	1157215	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG002_chrY_T0000095;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000095;transcript_name=HG002_chrY_T0000095;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000095:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1157216	1158180	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG002_chrY_T0000095;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000095;transcript_name=HG002_chrY_T0000095;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000095:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1158181	1158210	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG002_chrY_T0000095;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000095;transcript_name=HG002_chrY_T0000095;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000095:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1158211	1164384	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG002_chrY_T0000095;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000095;transcript_name=HG002_chrY_T0000095;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000095:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1164385	1164520	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG002_chrY_T0000095;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000095;transcript_name=HG002_chrY_T0000095;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000095:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1164521	1166791	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG002_chrY_T0000095;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000095;transcript_name=HG002_chrY_T0000095;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000095:3;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1166792	1166811	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG002_chrY_T0000095;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000095;transcript_name=HG002_chrY_T0000095;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000095:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1166812	1174073	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG002_chrY_T0000095;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000095;transcript_name=HG002_chrY_T0000095;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000095:4;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1174074	1174172	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG002_chrY_T0000095;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000095;transcript_name=HG002_chrY_T0000095;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000095:5;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1156979	1158332	1000	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711230.1;transcript_score=299.743;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711230.1;transcript_id=HG002_chrY_T0000099;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_G0000022;transcript_name=HG002_chrY_T0000099;gene_name=CSF2RA;ID=HG002_chrY_T0000099;Name=CSF2RA
HG002_chrY	CAT	exon	1156979	1157215	.	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711230.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711230.1;transcript_id=HG002_chrY_T0000099;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000099;transcript_name=HG002_chrY_T0000099;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000099:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1157216	1158180	.	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711230.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711230.1;transcript_id=HG002_chrY_T0000099;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000099;transcript_name=HG002_chrY_T0000099;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000099:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1158181	1158332	.	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711230.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711230.1;transcript_id=HG002_chrY_T0000099;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000099;transcript_name=HG002_chrY_T0000099;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000099:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1156979	1158671	1000	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711230.1;transcript_score=299.743;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;transcript_id=HG002_chrY_T0000100;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_G0000022;transcript_name=HG002_chrY_T0000100;gene_name=CSF2RA;ID=HG002_chrY_T0000100;Name=CSF2RA
HG002_chrY	CAT	exon	1156979	1157215	.	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711230.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;transcript_id=HG002_chrY_T0000100;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000100;transcript_name=HG002_chrY_T0000100;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000100:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1157216	1158180	.	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711230.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;transcript_id=HG002_chrY_T0000100;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000100;transcript_name=HG002_chrY_T0000100;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000100:0;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1158181	1158329	.	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711230.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;transcript_id=HG002_chrY_T0000100;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000100;transcript_name=HG002_chrY_T0000100;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000100:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1158330	1158668	.	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711230.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;transcript_id=HG002_chrY_T0000100;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000100;transcript_name=HG002_chrY_T0000100;gene_name=CSF2RA;ID=intron:HG002_chrY_T0000100:1;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1158669	1158671	.	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711230.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;transcript_id=HG002_chrY_T0000100;gene_id=HG002_chrY_G0000022;Parent=HG002_chrY_T0000100;transcript_name=HG002_chrY_T0000100;gene_name=CSF2RA;ID=exon:HG002_chrY_T0000100:2;Name=CSF2RA;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	1156064	1156138	.	+	.	source_gene_common_name=MIR3690;source_gene=ENSG00000292355.1;gene_id=HG002_chrY_G0000023;gene_biotype=miRNA;gene_name=MIR3690;gene_sources=liftoff;ID=HG002_chrY_G0000023;Name=MIR3690
HG002_chrY	CAT	transcript	1156064	1156138	1000	+	.	source_transcript=ENST00000711140.1;source_transcript_name=MIR3690-202;source_gene=ENSG00000292355.1;source_gene_biotype=miRNA;original_gene_id=ENSG00000292355.1;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=ENST00000711140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711140.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;transcript_id=HG002_chrY_T0000096;gene_id=HG002_chrY_G0000023;Parent=HG002_chrY_G0000023;transcript_name=HG002_chrY_T0000096;gene_name=MIR3690;ID=HG002_chrY_T0000096;Name=MIR3690
HG002_chrY	CAT	exon	1156064	1156138	.	+	.	source_transcript=ENST00000711140.1;source_transcript_name=MIR3690-202;source_gene=ENSG00000292355.1;source_gene_biotype=miRNA;original_gene_id=ENSG00000292355.1;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=ENST00000711140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711140.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;transcript_id=HG002_chrY_T0000096;gene_id=HG002_chrY_G0000023;Parent=HG002_chrY_T0000096;transcript_name=HG002_chrY_T0000096;gene_name=MIR3690;ID=exon:HG002_chrY_T0000096:0;Name=MIR3690;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	1156367	1156441	.	+	.	source_gene_common_name=MIR3690;source_gene=ENSG00000292355.1;alternative_source_transcripts=ENST00000711140.1;gene_id=HG002_chrY_G0000024;gene_biotype=miRNA;gene_name=MIR3690;gene_sources=liftoff;ID=HG002_chrY_G0000024;Name=MIR3690
HG002_chrY	CAT	transcript	1156367	1156441	1000	+	.	source_transcript=ENST00000711140.1;source_transcript_name=MIR3690-202;source_gene=ENSG00000292355.1;source_gene_biotype=miRNA;original_gene_id=ENSG00000292355.1;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=ENST00000711140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711140.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=ENST00000711140.1;transcript_id=HG002_chrY_T0000097;gene_id=HG002_chrY_G0000024;Parent=HG002_chrY_G0000024;transcript_name=HG002_chrY_T0000097;gene_name=MIR3690;ID=HG002_chrY_T0000097;Name=MIR3690
HG002_chrY	CAT	exon	1156367	1156441	.	+	.	source_transcript=ENST00000711140.1;source_transcript_name=MIR3690-202;source_gene=ENSG00000292355.1;source_gene_biotype=miRNA;original_gene_id=ENSG00000292355.1;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=ENST00000711140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711140.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=ENST00000711140.1;transcript_id=HG002_chrY_T0000097;gene_id=HG002_chrY_G0000024;Parent=HG002_chrY_T0000097;transcript_name=HG002_chrY_T0000097;gene_name=MIR3690;ID=exon:HG002_chrY_T0000097:0;Name=MIR3690;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	1156670	1156744	.	+	.	source_gene_common_name=MIR3690;source_gene=ENSG00000292355.1;alternative_source_transcripts=ENST00000711140.1;gene_id=HG002_chrY_G0000025;gene_biotype=miRNA;gene_name=MIR3690;gene_sources=liftoff;ID=HG002_chrY_G0000025;Name=MIR3690
HG002_chrY	CAT	transcript	1156670	1156744	1000	+	.	source_transcript=ENST00000711140.1;source_transcript_name=MIR3690-202;source_gene=ENSG00000292355.1;source_gene_biotype=miRNA;original_gene_id=ENSG00000292355.1;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=ENST00000711140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711140.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=ENST00000711140.1;transcript_id=HG002_chrY_T0000098;gene_id=HG002_chrY_G0000025;Parent=HG002_chrY_G0000025;transcript_name=HG002_chrY_T0000098;gene_name=MIR3690;ID=HG002_chrY_T0000098;Name=MIR3690
HG002_chrY	CAT	exon	1156670	1156744	.	+	.	source_transcript=ENST00000711140.1;source_transcript_name=MIR3690-202;source_gene=ENSG00000292355.1;source_gene_biotype=miRNA;original_gene_id=ENSG00000292355.1;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=ENST00000711140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711140.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=ENST00000711140.1;transcript_id=HG002_chrY_T0000098;gene_id=HG002_chrY_G0000025;Parent=HG002_chrY_T0000098;transcript_name=HG002_chrY_T0000098;gene_name=MIR3690;ID=exon:HG002_chrY_T0000098:0;Name=MIR3690;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	1164150	1164269	.	-	.	source_gene_common_name=RNA5SP498;source_gene=ENSG00000292356.1;alternative_source_transcripts=ENST00000711139.1,ENST00000711139.1;gene_id=HG002_chrY_G0000026;gene_biotype=rRNA_pseudogene;gene_name=RNA5SP498;gene_sources=liftoff;ID=HG002_chrY_G0000026;Name=RNA5SP498
HG002_chrY	CAT	transcript	1164150	1164269	1000	-	.	source_transcript=ENST00000711139.1;source_transcript_name=RNA5SP498-202;source_gene=ENSG00000292356.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000292356.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000711139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711139.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP498;alternative_source_transcripts=ENST00000711139.1,ENST00000711139.1;transcript_id=HG002_chrY_T0000101;gene_id=HG002_chrY_G0000026;Parent=HG002_chrY_G0000026;transcript_name=HG002_chrY_T0000101;gene_name=RNA5SP498;ID=HG002_chrY_T0000101;Name=RNA5SP498
HG002_chrY	CAT	exon	1164150	1164269	.	-	.	source_transcript=ENST00000711139.1;source_transcript_name=RNA5SP498-202;source_gene=ENSG00000292356.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000292356.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000711139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711139.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP498;alternative_source_transcripts=ENST00000711139.1,ENST00000711139.1;transcript_id=HG002_chrY_T0000101;gene_id=HG002_chrY_G0000026;Parent=HG002_chrY_T0000101;transcript_name=HG002_chrY_T0000101;gene_name=RNA5SP498;ID=exon:HG002_chrY_T0000101:0;Name=RNA5SP498;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	1201390	1246474	.	+	.	source_gene_common_name=IL3RA;source_gene=ENSG00000292332.1;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;gene_id=HG002_chrY_G0000027;gene_biotype=protein_coding;gene_name=IL3RA;gene_sources=liftoff;ID=HG002_chrY_G0000027;Name=IL3RA
HG002_chrY	CAT	transcript	1201390	1246474	100	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG002_chrY_T0000102;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_G0000027;transcript_name=HG002_chrY_T0000102;gene_name=IL3RA;ID=HG002_chrY_T0000102;Name=IL3RA
HG002_chrY	CAT	exon	1201390	1201700	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG002_chrY_T0000102;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000102;transcript_name=HG002_chrY_T0000102;gene_name=IL3RA;ID=exon:HG002_chrY_T0000102:0;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1201701	1206498	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG002_chrY_T0000102;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000102;transcript_name=HG002_chrY_T0000102;gene_name=IL3RA;ID=intron:HG002_chrY_T0000102:0;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1206499	1206600	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG002_chrY_T0000102;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000102;transcript_name=HG002_chrY_T0000102;gene_name=IL3RA;ID=exon:HG002_chrY_T0000102:1;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1206537	1206600	.	+	0	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG002_chrY_T0000102;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000102;transcript_name=HG002_chrY_T0000102;gene_name=IL3RA;ID=CDS:HG002_chrY_T0000102:0;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1206537	1206539	.	+	0	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG002_chrY_T0000102;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000102;transcript_name=HG002_chrY_T0000102;gene_name=IL3RA;ID=start_codon:HG002_chrY_T0000102;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1206601	1216885	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG002_chrY_T0000102;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000102;transcript_name=HG002_chrY_T0000102;gene_name=IL3RA;ID=intron:HG002_chrY_T0000102:1;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1216886	1217018	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG002_chrY_T0000102;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000102;transcript_name=HG002_chrY_T0000102;gene_name=IL3RA;ID=exon:HG002_chrY_T0000102:2;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1216886	1217018	.	+	2	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG002_chrY_T0000102;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000102;transcript_name=HG002_chrY_T0000102;gene_name=IL3RA;ID=CDS:HG002_chrY_T0000102:1;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1217019	1217107	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG002_chrY_T0000102;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000102;transcript_name=HG002_chrY_T0000102;gene_name=IL3RA;ID=intron:HG002_chrY_T0000102:2;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1217108	1217292	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG002_chrY_T0000102;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000102;transcript_name=HG002_chrY_T0000102;gene_name=IL3RA;ID=exon:HG002_chrY_T0000102:3;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1217108	1217292	.	+	1	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG002_chrY_T0000102;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000102;transcript_name=HG002_chrY_T0000102;gene_name=IL3RA;ID=CDS:HG002_chrY_T0000102:2;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1217293	1220966	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG002_chrY_T0000102;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000102;transcript_name=HG002_chrY_T0000102;gene_name=IL3RA;ID=intron:HG002_chrY_T0000102:3;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1220967	1221082	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG002_chrY_T0000102;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000102;transcript_name=HG002_chrY_T0000102;gene_name=IL3RA;ID=exon:HG002_chrY_T0000102:4;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1220967	1221082	.	+	2	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG002_chrY_T0000102;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000102;transcript_name=HG002_chrY_T0000102;gene_name=IL3RA;ID=CDS:HG002_chrY_T0000102:3;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1221083	1223606	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG002_chrY_T0000102;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000102;transcript_name=HG002_chrY_T0000102;gene_name=IL3RA;ID=intron:HG002_chrY_T0000102:4;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1223607	1223633	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG002_chrY_T0000102;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000102;transcript_name=HG002_chrY_T0000102;gene_name=IL3RA;ID=exon:HG002_chrY_T0000102:5;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1223607	1223633	.	+	0	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG002_chrY_T0000102;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000102;transcript_name=HG002_chrY_T0000102;gene_name=IL3RA;ID=CDS:HG002_chrY_T0000102:4;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1223634	1229928	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG002_chrY_T0000102;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000102;transcript_name=HG002_chrY_T0000102;gene_name=IL3RA;ID=intron:HG002_chrY_T0000102:5;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1229929	1230043	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG002_chrY_T0000102;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000102;transcript_name=HG002_chrY_T0000102;gene_name=IL3RA;ID=exon:HG002_chrY_T0000102:6;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1229929	1230043	.	+	0	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG002_chrY_T0000102;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000102;transcript_name=HG002_chrY_T0000102;gene_name=IL3RA;ID=CDS:HG002_chrY_T0000102:5;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1230044	1242345	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG002_chrY_T0000102;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000102;transcript_name=HG002_chrY_T0000102;gene_name=IL3RA;ID=intron:HG002_chrY_T0000102:6;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1242346	1242451	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG002_chrY_T0000102;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000102;transcript_name=HG002_chrY_T0000102;gene_name=IL3RA;ID=exon:HG002_chrY_T0000102:7;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1242346	1242451	.	+	2	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG002_chrY_T0000102;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000102;transcript_name=HG002_chrY_T0000102;gene_name=IL3RA;ID=CDS:HG002_chrY_T0000102:6;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1242452	1244728	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG002_chrY_T0000102;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000102;transcript_name=HG002_chrY_T0000102;gene_name=IL3RA;ID=intron:HG002_chrY_T0000102:7;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1244729	1244810	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG002_chrY_T0000102;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000102;transcript_name=HG002_chrY_T0000102;gene_name=IL3RA;ID=exon:HG002_chrY_T0000102:8;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1244729	1244810	.	+	1	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG002_chrY_T0000102;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000102;transcript_name=HG002_chrY_T0000102;gene_name=IL3RA;ID=CDS:HG002_chrY_T0000102:7;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1244811	1246174	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG002_chrY_T0000102;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000102;transcript_name=HG002_chrY_T0000102;gene_name=IL3RA;ID=intron:HG002_chrY_T0000102:8;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1246175	1246474	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG002_chrY_T0000102;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000102;transcript_name=HG002_chrY_T0000102;gene_name=IL3RA;ID=exon:HG002_chrY_T0000102:9;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1246175	1246249	.	+	0	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG002_chrY_T0000102;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000102;transcript_name=HG002_chrY_T0000102;gene_name=IL3RA;ID=CDS:HG002_chrY_T0000102:8;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1246247	1246249	.	+	0	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG002_chrY_T0000102;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000102;transcript_name=HG002_chrY_T0000102;gene_name=IL3RA;ID=stop_codon:HG002_chrY_T0000102;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1201559	1246474	100	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_G0000027;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=HG002_chrY_T0000103;Name=IL3RA
HG002_chrY	CAT	exon	1201559	1201700	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=exon:HG002_chrY_T0000103:0;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1201701	1206498	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=intron:HG002_chrY_T0000103:0;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1206499	1206600	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=exon:HG002_chrY_T0000103:1;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1206537	1206600	.	+	0	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=CDS:HG002_chrY_T0000103:0;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1206537	1206539	.	+	0	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=start_codon:HG002_chrY_T0000103;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1206601	1210090	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=intron:HG002_chrY_T0000103:1;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1210091	1210209	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=exon:HG002_chrY_T0000103:2;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1210091	1210209	.	+	2	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=CDS:HG002_chrY_T0000103:1;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1210210	1213208	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=intron:HG002_chrY_T0000103:2;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1213209	1213323	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=exon:HG002_chrY_T0000103:3;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1213209	1213323	.	+	0	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=CDS:HG002_chrY_T0000103:2;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1213324	1216885	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=intron:HG002_chrY_T0000103:3;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1216886	1217018	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=exon:HG002_chrY_T0000103:4;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1216886	1217018	.	+	2	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=CDS:HG002_chrY_T0000103:3;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1217019	1217107	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=intron:HG002_chrY_T0000103:4;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1217108	1217292	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=exon:HG002_chrY_T0000103:5;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1217108	1217292	.	+	1	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=CDS:HG002_chrY_T0000103:4;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1217293	1220966	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=intron:HG002_chrY_T0000103:5;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1220967	1221082	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=exon:HG002_chrY_T0000103:6;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1220967	1221082	.	+	2	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=CDS:HG002_chrY_T0000103:5;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1221083	1223606	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=intron:HG002_chrY_T0000103:6;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1223607	1223633	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=exon:HG002_chrY_T0000103:7;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1223607	1223633	.	+	0	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=CDS:HG002_chrY_T0000103:6;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1223634	1229928	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=intron:HG002_chrY_T0000103:7;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1229929	1230043	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=exon:HG002_chrY_T0000103:8;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1229929	1230043	.	+	0	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=CDS:HG002_chrY_T0000103:7;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1230044	1242345	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=intron:HG002_chrY_T0000103:8;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1242346	1242451	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=exon:HG002_chrY_T0000103:9;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1242346	1242451	.	+	2	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=CDS:HG002_chrY_T0000103:8;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1242452	1244728	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=intron:HG002_chrY_T0000103:9;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1244729	1244810	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=exon:HG002_chrY_T0000103:10;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1244729	1244810	.	+	1	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=CDS:HG002_chrY_T0000103:9;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1244811	1246174	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=intron:HG002_chrY_T0000103:10;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1246175	1246474	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=exon:HG002_chrY_T0000103:11;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1246175	1246249	.	+	0	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=CDS:HG002_chrY_T0000103:10;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1246247	1246249	.	+	0	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG002_chrY_T0000103;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000103;transcript_name=HG002_chrY_T0000103;gene_name=IL3RA;ID=stop_codon:HG002_chrY_T0000103;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1201570	1221077	100	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG002_chrY_T0000104;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_G0000027;transcript_name=HG002_chrY_T0000104;gene_name=IL3RA;ID=HG002_chrY_T0000104;Name=IL3RA
HG002_chrY	CAT	exon	1201570	1201700	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG002_chrY_T0000104;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000104;transcript_name=HG002_chrY_T0000104;gene_name=IL3RA;ID=exon:HG002_chrY_T0000104:0;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1201701	1206498	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG002_chrY_T0000104;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000104;transcript_name=HG002_chrY_T0000104;gene_name=IL3RA;ID=intron:HG002_chrY_T0000104:0;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1206499	1206600	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG002_chrY_T0000104;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000104;transcript_name=HG002_chrY_T0000104;gene_name=IL3RA;ID=exon:HG002_chrY_T0000104:1;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1206537	1206600	.	+	0	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG002_chrY_T0000104;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000104;transcript_name=HG002_chrY_T0000104;gene_name=IL3RA;ID=CDS:HG002_chrY_T0000104:0;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1206537	1206539	.	+	0	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG002_chrY_T0000104;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000104;transcript_name=HG002_chrY_T0000104;gene_name=IL3RA;ID=start_codon:HG002_chrY_T0000104;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1206601	1216885	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG002_chrY_T0000104;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000104;transcript_name=HG002_chrY_T0000104;gene_name=IL3RA;ID=intron:HG002_chrY_T0000104:1;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1216886	1217018	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG002_chrY_T0000104;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000104;transcript_name=HG002_chrY_T0000104;gene_name=IL3RA;ID=exon:HG002_chrY_T0000104:2;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1216886	1217018	.	+	2	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG002_chrY_T0000104;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000104;transcript_name=HG002_chrY_T0000104;gene_name=IL3RA;ID=CDS:HG002_chrY_T0000104:1;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1217019	1217107	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG002_chrY_T0000104;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000104;transcript_name=HG002_chrY_T0000104;gene_name=IL3RA;ID=intron:HG002_chrY_T0000104:2;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1217108	1217292	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG002_chrY_T0000104;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000104;transcript_name=HG002_chrY_T0000104;gene_name=IL3RA;ID=exon:HG002_chrY_T0000104:3;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1217108	1217292	.	+	1	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG002_chrY_T0000104;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000104;transcript_name=HG002_chrY_T0000104;gene_name=IL3RA;ID=CDS:HG002_chrY_T0000104:2;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1217293	1220966	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG002_chrY_T0000104;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000104;transcript_name=HG002_chrY_T0000104;gene_name=IL3RA;ID=intron:HG002_chrY_T0000104:3;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1220967	1221077	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG002_chrY_T0000104;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000104;transcript_name=HG002_chrY_T0000104;gene_name=IL3RA;ID=exon:HG002_chrY_T0000104:4;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1220967	1221077	.	+	2	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG002_chrY_T0000104;gene_id=HG002_chrY_G0000027;Parent=HG002_chrY_T0000104;transcript_name=HG002_chrY_T0000104;gene_name=IL3RA;ID=CDS:HG002_chrY_T0000104:3;Name=IL3RA;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	1201939	1206588	.	-	.	source_gene_common_name=ENSG00000310549;source_gene=ENSG00000310549.1;alternative_source_transcripts=ENST00000850718.1,ENST00000850718.1;gene_id=HG002_chrY_G0000028;gene_biotype=lncRNA;gene_name=ENSG00000310549;gene_sources=liftoff;ID=HG002_chrY_G0000028;Name=ENSG00000310549
HG002_chrY	CAT	transcript	1201939	1206588	1000	-	.	source_transcript=ENST00000850718.1;source_transcript_name=ENST00000850718;source_gene=ENSG00000310549.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310549.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850718.1;transcript_score=299.65;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310549;alternative_source_transcripts=ENST00000850718.1,ENST00000850718.1;transcript_id=HG002_chrY_T0000105;gene_id=HG002_chrY_G0000028;Parent=HG002_chrY_G0000028;transcript_name=HG002_chrY_T0000105;gene_name=ENSG00000310549;ID=HG002_chrY_T0000105;Name=ENSG00000310549
HG002_chrY	CAT	exon	1201939	1202290	.	-	.	source_transcript=ENST00000850718.1;source_transcript_name=ENST00000850718;source_gene=ENSG00000310549.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310549.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850718.1;transcript_score=299.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310549;alternative_source_transcripts=ENST00000850718.1,ENST00000850718.1;transcript_id=HG002_chrY_T0000105;gene_id=HG002_chrY_G0000028;Parent=HG002_chrY_T0000105;transcript_name=HG002_chrY_T0000105;gene_name=ENSG00000310549;ID=exon:HG002_chrY_T0000105:0;Name=ENSG00000310549;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1202291	1206368	.	-	.	source_transcript=ENST00000850718.1;source_transcript_name=ENST00000850718;source_gene=ENSG00000310549.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310549.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850718.1;transcript_score=299.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310549;alternative_source_transcripts=ENST00000850718.1,ENST00000850718.1;transcript_id=HG002_chrY_T0000105;gene_id=HG002_chrY_G0000028;Parent=HG002_chrY_T0000105;transcript_name=HG002_chrY_T0000105;gene_name=ENSG00000310549;ID=intron:HG002_chrY_T0000105:0;Name=ENSG00000310549;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1206369	1206588	.	-	.	source_transcript=ENST00000850718.1;source_transcript_name=ENST00000850718;source_gene=ENSG00000310549.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310549.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850718.1;transcript_score=299.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310549;alternative_source_transcripts=ENST00000850718.1,ENST00000850718.1;transcript_id=HG002_chrY_T0000105;gene_id=HG002_chrY_G0000028;Parent=HG002_chrY_T0000105;transcript_name=HG002_chrY_T0000105;gene_name=ENSG00000310549;ID=exon:HG002_chrY_T0000105:1;Name=ENSG00000310549;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1203413	1206586	1000	-	.	source_transcript=ENST00000850719.1;source_transcript_name=ENST00000850719;source_gene=ENSG00000310549.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310549.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850719.1;transcript_score=299.45799999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310549;alternative_source_transcripts=ENST00000850719.1,ENST00000850719.1;transcript_id=HG002_chrY_T0000106;gene_id=HG002_chrY_G0000028;Parent=HG002_chrY_G0000028;transcript_name=HG002_chrY_T0000106;gene_name=ENSG00000310549;ID=HG002_chrY_T0000106;Name=ENSG00000310549
HG002_chrY	CAT	exon	1203413	1203563	.	-	.	source_transcript=ENST00000850719.1;source_transcript_name=ENST00000850719;source_gene=ENSG00000310549.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310549.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850719.1;transcript_score=299.45799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310549;alternative_source_transcripts=ENST00000850719.1,ENST00000850719.1;transcript_id=HG002_chrY_T0000106;gene_id=HG002_chrY_G0000028;Parent=HG002_chrY_T0000106;transcript_name=HG002_chrY_T0000106;gene_name=ENSG00000310549;ID=exon:HG002_chrY_T0000106:0;Name=ENSG00000310549;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1203564	1206368	.	-	.	source_transcript=ENST00000850719.1;source_transcript_name=ENST00000850719;source_gene=ENSG00000310549.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310549.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850719.1;transcript_score=299.45799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310549;alternative_source_transcripts=ENST00000850719.1,ENST00000850719.1;transcript_id=HG002_chrY_T0000106;gene_id=HG002_chrY_G0000028;Parent=HG002_chrY_T0000106;transcript_name=HG002_chrY_T0000106;gene_name=ENSG00000310549;ID=intron:HG002_chrY_T0000106:0;Name=ENSG00000310549;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1206369	1206586	.	-	.	source_transcript=ENST00000850719.1;source_transcript_name=ENST00000850719;source_gene=ENSG00000310549.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310549.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850719.1;transcript_score=299.45799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310549;alternative_source_transcripts=ENST00000850719.1,ENST00000850719.1;transcript_id=HG002_chrY_T0000106;gene_id=HG002_chrY_G0000028;Parent=HG002_chrY_T0000106;transcript_name=HG002_chrY_T0000106;gene_name=ENSG00000310549;ID=exon:HG002_chrY_T0000106:1;Name=ENSG00000310549;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	1249931	1256011	.	-	.	source_gene_common_name=SLC25A6;source_gene=ENSG00000292334.1;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;gene_id=HG002_chrY_G0000029;gene_biotype=protein_coding;gene_name=SLC25A6;gene_sources=liftoff;ID=HG002_chrY_G0000029;Name=SLC25A6
HG002_chrY	CAT	transcript	1249931	1256011	100	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG002_chrY_T0000107;gene_id=HG002_chrY_G0000029;Parent=HG002_chrY_G0000029;transcript_name=HG002_chrY_T0000107;gene_name=SLC25A6;ID=HG002_chrY_T0000107;Name=SLC25A6
HG002_chrY	CAT	exon	1249931	1250538	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG002_chrY_T0000107;gene_id=HG002_chrY_G0000029;Parent=HG002_chrY_T0000107;transcript_name=HG002_chrY_T0000107;gene_name=SLC25A6;ID=exon:HG002_chrY_T0000107:0;Name=SLC25A6;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1250381	1250538	.	-	2	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG002_chrY_T0000107;gene_id=HG002_chrY_G0000029;Parent=HG002_chrY_T0000107;transcript_name=HG002_chrY_T0000107;gene_name=SLC25A6;ID=CDS:HG002_chrY_T0000107:0;Name=SLC25A6;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1250381	1250383	.	-	0	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG002_chrY_T0000107;gene_id=HG002_chrY_G0000029;Parent=HG002_chrY_T0000107;transcript_name=HG002_chrY_T0000107;gene_name=SLC25A6;ID=stop_codon:HG002_chrY_T0000107;Name=SLC25A6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1250539	1251057	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG002_chrY_T0000107;gene_id=HG002_chrY_G0000029;Parent=HG002_chrY_T0000107;transcript_name=HG002_chrY_T0000107;gene_name=SLC25A6;ID=intron:HG002_chrY_T0000107:0;Name=SLC25A6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1251058	1251198	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG002_chrY_T0000107;gene_id=HG002_chrY_G0000029;Parent=HG002_chrY_T0000107;transcript_name=HG002_chrY_T0000107;gene_name=SLC25A6;ID=exon:HG002_chrY_T0000107:1;Name=SLC25A6;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1251058	1251198	.	-	2	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG002_chrY_T0000107;gene_id=HG002_chrY_G0000029;Parent=HG002_chrY_T0000107;transcript_name=HG002_chrY_T0000107;gene_name=SLC25A6;ID=CDS:HG002_chrY_T0000107:1;Name=SLC25A6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1251199	1253019	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG002_chrY_T0000107;gene_id=HG002_chrY_G0000029;Parent=HG002_chrY_T0000107;transcript_name=HG002_chrY_T0000107;gene_name=SLC25A6;ID=intron:HG002_chrY_T0000107:1;Name=SLC25A6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1253020	1253506	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG002_chrY_T0000107;gene_id=HG002_chrY_G0000029;Parent=HG002_chrY_T0000107;transcript_name=HG002_chrY_T0000107;gene_name=SLC25A6;ID=exon:HG002_chrY_T0000107:2;Name=SLC25A6;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1253020	1253506	.	-	0	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG002_chrY_T0000107;gene_id=HG002_chrY_G0000029;Parent=HG002_chrY_T0000107;transcript_name=HG002_chrY_T0000107;gene_name=SLC25A6;ID=CDS:HG002_chrY_T0000107:2;Name=SLC25A6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1253507	1255796	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG002_chrY_T0000107;gene_id=HG002_chrY_G0000029;Parent=HG002_chrY_T0000107;transcript_name=HG002_chrY_T0000107;gene_name=SLC25A6;ID=intron:HG002_chrY_T0000107:2;Name=SLC25A6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1255797	1256011	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG002_chrY_T0000107;gene_id=HG002_chrY_G0000029;Parent=HG002_chrY_T0000107;transcript_name=HG002_chrY_T0000107;gene_name=SLC25A6;ID=exon:HG002_chrY_T0000107:3;Name=SLC25A6;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1255797	1255907	.	-	0	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG002_chrY_T0000107;gene_id=HG002_chrY_G0000029;Parent=HG002_chrY_T0000107;transcript_name=HG002_chrY_T0000107;gene_name=SLC25A6;ID=CDS:HG002_chrY_T0000107:3;Name=SLC25A6;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1255905	1255907	.	-	0	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG002_chrY_T0000107;gene_id=HG002_chrY_G0000029;Parent=HG002_chrY_T0000107;transcript_name=HG002_chrY_T0000107;gene_name=SLC25A6;ID=start_codon:HG002_chrY_T0000107;Name=SLC25A6;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1251090	1256001	1000	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=HG002_chrY_T0000108;gene_id=HG002_chrY_G0000029;Parent=HG002_chrY_G0000029;transcript_name=HG002_chrY_T0000108;gene_name=SLC25A6;ID=HG002_chrY_T0000108;Name=SLC25A6
HG002_chrY	CAT	exon	1251090	1251198	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=HG002_chrY_T0000108;gene_id=HG002_chrY_G0000029;Parent=HG002_chrY_T0000108;transcript_name=HG002_chrY_T0000108;gene_name=SLC25A6;ID=exon:HG002_chrY_T0000108:0;Name=SLC25A6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1251199	1253019	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=HG002_chrY_T0000108;gene_id=HG002_chrY_G0000029;Parent=HG002_chrY_T0000108;transcript_name=HG002_chrY_T0000108;gene_name=SLC25A6;ID=intron:HG002_chrY_T0000108:0;Name=SLC25A6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1253020	1253506	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=HG002_chrY_T0000108;gene_id=HG002_chrY_G0000029;Parent=HG002_chrY_T0000108;transcript_name=HG002_chrY_T0000108;gene_name=SLC25A6;ID=exon:HG002_chrY_T0000108:1;Name=SLC25A6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1253507	1253970	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=HG002_chrY_T0000108;gene_id=HG002_chrY_G0000029;Parent=HG002_chrY_T0000108;transcript_name=HG002_chrY_T0000108;gene_name=SLC25A6;ID=intron:HG002_chrY_T0000108:1;Name=SLC25A6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1253971	1254069	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=HG002_chrY_T0000108;gene_id=HG002_chrY_G0000029;Parent=HG002_chrY_T0000108;transcript_name=HG002_chrY_T0000108;gene_name=SLC25A6;ID=exon:HG002_chrY_T0000108:2;Name=SLC25A6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1254070	1255796	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=HG002_chrY_T0000108;gene_id=HG002_chrY_G0000029;Parent=HG002_chrY_T0000108;transcript_name=HG002_chrY_T0000108;gene_name=SLC25A6;ID=intron:HG002_chrY_T0000108:2;Name=SLC25A6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1255797	1256001	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=HG002_chrY_T0000108;gene_id=HG002_chrY_G0000029;Parent=HG002_chrY_T0000108;transcript_name=HG002_chrY_T0000108;gene_name=SLC25A6;ID=exon:HG002_chrY_T0000108:3;Name=SLC25A6;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1251124	1255986	1000	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=HG002_chrY_T0000109;gene_id=HG002_chrY_G0000029;Parent=HG002_chrY_G0000029;transcript_name=HG002_chrY_T0000109;gene_name=SLC25A6;ID=HG002_chrY_T0000109;Name=SLC25A6
HG002_chrY	CAT	exon	1251124	1251198	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=HG002_chrY_T0000109;gene_id=HG002_chrY_G0000029;Parent=HG002_chrY_T0000109;transcript_name=HG002_chrY_T0000109;gene_name=SLC25A6;ID=exon:HG002_chrY_T0000109:0;Name=SLC25A6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1251199	1253019	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=HG002_chrY_T0000109;gene_id=HG002_chrY_G0000029;Parent=HG002_chrY_T0000109;transcript_name=HG002_chrY_T0000109;gene_name=SLC25A6;ID=intron:HG002_chrY_T0000109:0;Name=SLC25A6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1253020	1253506	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=HG002_chrY_T0000109;gene_id=HG002_chrY_G0000029;Parent=HG002_chrY_T0000109;transcript_name=HG002_chrY_T0000109;gene_name=SLC25A6;ID=exon:HG002_chrY_T0000109:1;Name=SLC25A6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1253507	1253970	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=HG002_chrY_T0000109;gene_id=HG002_chrY_G0000029;Parent=HG002_chrY_T0000109;transcript_name=HG002_chrY_T0000109;gene_name=SLC25A6;ID=intron:HG002_chrY_T0000109:1;Name=SLC25A6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1253971	1254072	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=HG002_chrY_T0000109;gene_id=HG002_chrY_G0000029;Parent=HG002_chrY_T0000109;transcript_name=HG002_chrY_T0000109;gene_name=SLC25A6;ID=exon:HG002_chrY_T0000109:2;Name=SLC25A6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1254073	1255796	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=HG002_chrY_T0000109;gene_id=HG002_chrY_G0000029;Parent=HG002_chrY_T0000109;transcript_name=HG002_chrY_T0000109;gene_name=SLC25A6;ID=intron:HG002_chrY_T0000109:2;Name=SLC25A6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1255797	1255986	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=HG002_chrY_T0000109;gene_id=HG002_chrY_G0000029;Parent=HG002_chrY_T0000109;transcript_name=HG002_chrY_T0000109;gene_name=SLC25A6;ID=exon:HG002_chrY_T0000109:3;Name=SLC25A6;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	1256577	1264442	.	+	.	source_gene_common_name=LINC00106;source_gene=ENSG00000292341.2;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;gene_id=HG002_chrY_G0000030;gene_biotype=lncRNA;gene_name=LINC00106;gene_sources=liftoff;ID=HG002_chrY_G0000030;Name=LINC00106
HG002_chrY	CAT	transcript	1256577	1264442	1000	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=HG002_chrY_T0000110;gene_id=HG002_chrY_G0000030;Parent=HG002_chrY_G0000030;transcript_name=HG002_chrY_T0000110;gene_name=LINC00106;ID=HG002_chrY_T0000110;Name=LINC00106
HG002_chrY	CAT	exon	1256577	1256661	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=HG002_chrY_T0000110;gene_id=HG002_chrY_G0000030;Parent=HG002_chrY_T0000110;transcript_name=HG002_chrY_T0000110;gene_name=LINC00106;ID=exon:HG002_chrY_T0000110:0;Name=LINC00106;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1256662	1260289	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=HG002_chrY_T0000110;gene_id=HG002_chrY_G0000030;Parent=HG002_chrY_T0000110;transcript_name=HG002_chrY_T0000110;gene_name=LINC00106;ID=intron:HG002_chrY_T0000110:0;Name=LINC00106;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1260290	1260566	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=HG002_chrY_T0000110;gene_id=HG002_chrY_G0000030;Parent=HG002_chrY_T0000110;transcript_name=HG002_chrY_T0000110;gene_name=LINC00106;ID=exon:HG002_chrY_T0000110:1;Name=LINC00106;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1260567	1262742	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=HG002_chrY_T0000110;gene_id=HG002_chrY_G0000030;Parent=HG002_chrY_T0000110;transcript_name=HG002_chrY_T0000110;gene_name=LINC00106;ID=intron:HG002_chrY_T0000110:1;Name=LINC00106;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1262743	1262876	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=HG002_chrY_T0000110;gene_id=HG002_chrY_G0000030;Parent=HG002_chrY_T0000110;transcript_name=HG002_chrY_T0000110;gene_name=LINC00106;ID=exon:HG002_chrY_T0000110:2;Name=LINC00106;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1262877	1264078	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=HG002_chrY_T0000110;gene_id=HG002_chrY_G0000030;Parent=HG002_chrY_T0000110;transcript_name=HG002_chrY_T0000110;gene_name=LINC00106;ID=intron:HG002_chrY_T0000110:2;Name=LINC00106;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1264079	1264442	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=HG002_chrY_T0000110;gene_id=HG002_chrY_G0000030;Parent=HG002_chrY_T0000110;transcript_name=HG002_chrY_T0000110;gene_name=LINC00106;ID=exon:HG002_chrY_T0000110:3;Name=LINC00106;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1256627	1263330	1000	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=HG002_chrY_T0000111;gene_id=HG002_chrY_G0000030;Parent=HG002_chrY_G0000030;transcript_name=HG002_chrY_T0000111;gene_name=LINC00106;ID=HG002_chrY_T0000111;Name=LINC00106
HG002_chrY	CAT	exon	1256627	1256661	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=HG002_chrY_T0000111;gene_id=HG002_chrY_G0000030;Parent=HG002_chrY_T0000111;transcript_name=HG002_chrY_T0000111;gene_name=LINC00106;ID=exon:HG002_chrY_T0000111:0;Name=LINC00106;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1256662	1260289	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=HG002_chrY_T0000111;gene_id=HG002_chrY_G0000030;Parent=HG002_chrY_T0000111;transcript_name=HG002_chrY_T0000111;gene_name=LINC00106;ID=intron:HG002_chrY_T0000111:0;Name=LINC00106;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1260290	1260566	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=HG002_chrY_T0000111;gene_id=HG002_chrY_G0000030;Parent=HG002_chrY_T0000111;transcript_name=HG002_chrY_T0000111;gene_name=LINC00106;ID=exon:HG002_chrY_T0000111:1;Name=LINC00106;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1260567	1262742	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=HG002_chrY_T0000111;gene_id=HG002_chrY_G0000030;Parent=HG002_chrY_T0000111;transcript_name=HG002_chrY_T0000111;gene_name=LINC00106;ID=intron:HG002_chrY_T0000111:1;Name=LINC00106;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1262743	1262876	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=HG002_chrY_T0000111;gene_id=HG002_chrY_G0000030;Parent=HG002_chrY_T0000111;transcript_name=HG002_chrY_T0000111;gene_name=LINC00106;ID=exon:HG002_chrY_T0000111:2;Name=LINC00106;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1262877	1263284	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=HG002_chrY_T0000111;gene_id=HG002_chrY_G0000030;Parent=HG002_chrY_T0000111;transcript_name=HG002_chrY_T0000111;gene_name=LINC00106;ID=intron:HG002_chrY_T0000111:2;Name=LINC00106;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1263285	1263330	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=HG002_chrY_T0000111;gene_id=HG002_chrY_G0000030;Parent=HG002_chrY_T0000111;transcript_name=HG002_chrY_T0000111;gene_name=LINC00106;ID=exon:HG002_chrY_T0000111:3;Name=LINC00106;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1260290	1264442	1000	+	.	source_transcript=ENST00000850717.1;source_transcript_name=LINC00106-207;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850717.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850717.1,ENST00000850717.1;transcript_id=HG002_chrY_T0000112;gene_id=HG002_chrY_G0000030;Parent=HG002_chrY_G0000030;transcript_name=HG002_chrY_T0000112;gene_name=LINC00106;ID=HG002_chrY_T0000112;Name=LINC00106
HG002_chrY	CAT	exon	1260290	1260566	.	+	.	source_transcript=ENST00000850717.1;source_transcript_name=LINC00106-207;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850717.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850717.1,ENST00000850717.1;transcript_id=HG002_chrY_T0000112;gene_id=HG002_chrY_G0000030;Parent=HG002_chrY_T0000112;transcript_name=HG002_chrY_T0000112;gene_name=LINC00106;ID=exon:HG002_chrY_T0000112:0;Name=LINC00106;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1260567	1262742	.	+	.	source_transcript=ENST00000850717.1;source_transcript_name=LINC00106-207;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850717.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850717.1,ENST00000850717.1;transcript_id=HG002_chrY_T0000112;gene_id=HG002_chrY_G0000030;Parent=HG002_chrY_T0000112;transcript_name=HG002_chrY_T0000112;gene_name=LINC00106;ID=intron:HG002_chrY_T0000112:0;Name=LINC00106;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1262743	1262876	.	+	.	source_transcript=ENST00000850717.1;source_transcript_name=LINC00106-207;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850717.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850717.1,ENST00000850717.1;transcript_id=HG002_chrY_T0000112;gene_id=HG002_chrY_G0000030;Parent=HG002_chrY_T0000112;transcript_name=HG002_chrY_T0000112;gene_name=LINC00106;ID=exon:HG002_chrY_T0000112:1;Name=LINC00106;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1262877	1264081	.	+	.	source_transcript=ENST00000850717.1;source_transcript_name=LINC00106-207;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850717.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850717.1,ENST00000850717.1;transcript_id=HG002_chrY_T0000112;gene_id=HG002_chrY_G0000030;Parent=HG002_chrY_T0000112;transcript_name=HG002_chrY_T0000112;gene_name=LINC00106;ID=intron:HG002_chrY_T0000112:1;Name=LINC00106;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1264082	1264442	.	+	.	source_transcript=ENST00000850717.1;source_transcript_name=LINC00106-207;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850717.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850717.1,ENST00000850717.1;transcript_id=HG002_chrY_T0000112;gene_id=HG002_chrY_G0000030;Parent=HG002_chrY_T0000112;transcript_name=HG002_chrY_T0000112;gene_name=LINC00106;ID=exon:HG002_chrY_T0000112:2;Name=LINC00106;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1260943	1263320	1000	+	.	source_transcript=ENST00000711188.1;source_transcript_name=LINC00106-205;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711188.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000711188.1,ENST00000711188.1;transcript_id=HG002_chrY_T0000113;gene_id=HG002_chrY_G0000030;Parent=HG002_chrY_G0000030;transcript_name=HG002_chrY_T0000113;gene_name=LINC00106;ID=HG002_chrY_T0000113;Name=LINC00106
HG002_chrY	CAT	exon	1260943	1261142	.	+	.	source_transcript=ENST00000711188.1;source_transcript_name=LINC00106-205;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711188.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000711188.1,ENST00000711188.1;transcript_id=HG002_chrY_T0000113;gene_id=HG002_chrY_G0000030;Parent=HG002_chrY_T0000113;transcript_name=HG002_chrY_T0000113;gene_name=LINC00106;ID=exon:HG002_chrY_T0000113:0;Name=LINC00106;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1261143	1262742	.	+	.	source_transcript=ENST00000711188.1;source_transcript_name=LINC00106-205;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711188.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000711188.1,ENST00000711188.1;transcript_id=HG002_chrY_T0000113;gene_id=HG002_chrY_G0000030;Parent=HG002_chrY_T0000113;transcript_name=HG002_chrY_T0000113;gene_name=LINC00106;ID=intron:HG002_chrY_T0000113:0;Name=LINC00106;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1262743	1262876	.	+	.	source_transcript=ENST00000711188.1;source_transcript_name=LINC00106-205;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711188.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000711188.1,ENST00000711188.1;transcript_id=HG002_chrY_T0000113;gene_id=HG002_chrY_G0000030;Parent=HG002_chrY_T0000113;transcript_name=HG002_chrY_T0000113;gene_name=LINC00106;ID=exon:HG002_chrY_T0000113:1;Name=LINC00106;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1262877	1263284	.	+	.	source_transcript=ENST00000711188.1;source_transcript_name=LINC00106-205;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711188.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000711188.1,ENST00000711188.1;transcript_id=HG002_chrY_T0000113;gene_id=HG002_chrY_G0000030;Parent=HG002_chrY_T0000113;transcript_name=HG002_chrY_T0000113;gene_name=LINC00106;ID=intron:HG002_chrY_T0000113:1;Name=LINC00106;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1263285	1263320	.	+	.	source_transcript=ENST00000711188.1;source_transcript_name=LINC00106-205;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711188.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000711188.1,ENST00000711188.1;transcript_id=HG002_chrY_T0000113;gene_id=HG002_chrY_G0000030;Parent=HG002_chrY_T0000113;transcript_name=HG002_chrY_T0000113;gene_name=LINC00106;ID=exon:HG002_chrY_T0000113:2;Name=LINC00106;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	1265348	1276413	.	+	.	source_gene_common_name=ASMTL-AS1;source_gene=ENSG00000292331.2;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;gene_id=HG002_chrY_G0000031;gene_biotype=lncRNA;gene_name=ASMTL-AS1;gene_sources=liftoff;ID=HG002_chrY_G0000031;Name=ASMTL-AS1
HG002_chrY	CAT	transcript	1265348	1276413	1000	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=HG002_chrY_T0000114;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_G0000031;transcript_name=HG002_chrY_T0000114;gene_name=ASMTL-AS1;ID=HG002_chrY_T0000114;Name=ASMTL-AS1
HG002_chrY	CAT	exon	1265348	1265504	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=HG002_chrY_T0000114;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000114;transcript_name=HG002_chrY_T0000114;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000114:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1265505	1265941	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=HG002_chrY_T0000114;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000114;transcript_name=HG002_chrY_T0000114;gene_name=ASMTL-AS1;ID=intron:HG002_chrY_T0000114:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1265942	1266143	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=HG002_chrY_T0000114;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000114;transcript_name=HG002_chrY_T0000114;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000114:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1266144	1267295	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=HG002_chrY_T0000114;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000114;transcript_name=HG002_chrY_T0000114;gene_name=ASMTL-AS1;ID=intron:HG002_chrY_T0000114:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1267296	1267420	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=HG002_chrY_T0000114;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000114;transcript_name=HG002_chrY_T0000114;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000114:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1267421	1275131	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=HG002_chrY_T0000114;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000114;transcript_name=HG002_chrY_T0000114;gene_name=ASMTL-AS1;ID=intron:HG002_chrY_T0000114:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1275132	1275277	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=HG002_chrY_T0000114;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000114;transcript_name=HG002_chrY_T0000114;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000114:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1275278	1276137	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=HG002_chrY_T0000114;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000114;transcript_name=HG002_chrY_T0000114;gene_name=ASMTL-AS1;ID=intron:HG002_chrY_T0000114:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1276138	1276413	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=HG002_chrY_T0000114;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000114;transcript_name=HG002_chrY_T0000114;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000114:4;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1265383	1275975	1000	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=HG002_chrY_T0000115;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_G0000031;transcript_name=HG002_chrY_T0000115;gene_name=ASMTL-AS1;ID=HG002_chrY_T0000115;Name=ASMTL-AS1
HG002_chrY	CAT	exon	1265383	1265504	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=HG002_chrY_T0000115;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000115;transcript_name=HG002_chrY_T0000115;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000115:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1265505	1265941	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=HG002_chrY_T0000115;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000115;transcript_name=HG002_chrY_T0000115;gene_name=ASMTL-AS1;ID=intron:HG002_chrY_T0000115:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1265942	1266143	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=HG002_chrY_T0000115;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000115;transcript_name=HG002_chrY_T0000115;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000115:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1266144	1267295	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=HG002_chrY_T0000115;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000115;transcript_name=HG002_chrY_T0000115;gene_name=ASMTL-AS1;ID=intron:HG002_chrY_T0000115:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1267296	1267420	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=HG002_chrY_T0000115;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000115;transcript_name=HG002_chrY_T0000115;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000115:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1267421	1275131	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=HG002_chrY_T0000115;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000115;transcript_name=HG002_chrY_T0000115;gene_name=ASMTL-AS1;ID=intron:HG002_chrY_T0000115:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1275132	1275277	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=HG002_chrY_T0000115;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000115;transcript_name=HG002_chrY_T0000115;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000115:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1275278	1275612	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=HG002_chrY_T0000115;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000115;transcript_name=HG002_chrY_T0000115;gene_name=ASMTL-AS1;ID=intron:HG002_chrY_T0000115:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1275613	1275975	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=HG002_chrY_T0000115;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000115;transcript_name=HG002_chrY_T0000115;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000115:4;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1265383	1275544	1000	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=HG002_chrY_T0000116;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_G0000031;transcript_name=HG002_chrY_T0000116;gene_name=ASMTL-AS1;ID=HG002_chrY_T0000116;Name=ASMTL-AS1
HG002_chrY	CAT	exon	1265383	1265504	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=HG002_chrY_T0000116;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000116;transcript_name=HG002_chrY_T0000116;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000116:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1265505	1265941	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=HG002_chrY_T0000116;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000116;transcript_name=HG002_chrY_T0000116;gene_name=ASMTL-AS1;ID=intron:HG002_chrY_T0000116:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1265942	1266143	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=HG002_chrY_T0000116;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000116;transcript_name=HG002_chrY_T0000116;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000116:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1266144	1267295	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=HG002_chrY_T0000116;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000116;transcript_name=HG002_chrY_T0000116;gene_name=ASMTL-AS1;ID=intron:HG002_chrY_T0000116:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1267296	1267420	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=HG002_chrY_T0000116;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000116;transcript_name=HG002_chrY_T0000116;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000116:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1267421	1275131	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=HG002_chrY_T0000116;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000116;transcript_name=HG002_chrY_T0000116;gene_name=ASMTL-AS1;ID=intron:HG002_chrY_T0000116:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1275132	1275544	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=HG002_chrY_T0000116;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000116;transcript_name=HG002_chrY_T0000116;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000116:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1265393	1276413	1000	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=HG002_chrY_T0000117;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_G0000031;transcript_name=HG002_chrY_T0000117;gene_name=ASMTL-AS1;ID=HG002_chrY_T0000117;Name=ASMTL-AS1
HG002_chrY	CAT	exon	1265393	1265504	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=HG002_chrY_T0000117;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000117;transcript_name=HG002_chrY_T0000117;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000117:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1265505	1265941	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=HG002_chrY_T0000117;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000117;transcript_name=HG002_chrY_T0000117;gene_name=ASMTL-AS1;ID=intron:HG002_chrY_T0000117:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1265942	1266143	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=HG002_chrY_T0000117;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000117;transcript_name=HG002_chrY_T0000117;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000117:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1266144	1267295	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=HG002_chrY_T0000117;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000117;transcript_name=HG002_chrY_T0000117;gene_name=ASMTL-AS1;ID=intron:HG002_chrY_T0000117:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1267296	1267420	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=HG002_chrY_T0000117;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000117;transcript_name=HG002_chrY_T0000117;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000117:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1267421	1275131	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=HG002_chrY_T0000117;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000117;transcript_name=HG002_chrY_T0000117;gene_name=ASMTL-AS1;ID=intron:HG002_chrY_T0000117:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1275132	1275277	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=HG002_chrY_T0000117;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000117;transcript_name=HG002_chrY_T0000117;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000117:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1275278	1276150	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=HG002_chrY_T0000117;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000117;transcript_name=HG002_chrY_T0000117;gene_name=ASMTL-AS1;ID=intron:HG002_chrY_T0000117:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1276151	1276413	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=HG002_chrY_T0000117;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000117;transcript_name=HG002_chrY_T0000117;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000117:4;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1265687	1267328	1000	+	.	source_transcript=ENST00000711119.1;source_transcript_name=ASMTL-AS1-213;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711119.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711119.1,ENST00000711119.1;transcript_id=HG002_chrY_T0000118;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_G0000031;transcript_name=HG002_chrY_T0000118;gene_name=ASMTL-AS1;ID=HG002_chrY_T0000118;Name=ASMTL-AS1
HG002_chrY	CAT	exon	1265687	1266143	.	+	.	source_transcript=ENST00000711119.1;source_transcript_name=ASMTL-AS1-213;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711119.1,ENST00000711119.1;transcript_id=HG002_chrY_T0000118;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000118;transcript_name=HG002_chrY_T0000118;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000118:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1266144	1267211	.	+	.	source_transcript=ENST00000711119.1;source_transcript_name=ASMTL-AS1-213;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711119.1,ENST00000711119.1;transcript_id=HG002_chrY_T0000118;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000118;transcript_name=HG002_chrY_T0000118;gene_name=ASMTL-AS1;ID=intron:HG002_chrY_T0000118:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1267212	1267328	.	+	.	source_transcript=ENST00000711119.1;source_transcript_name=ASMTL-AS1-213;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711119.1,ENST00000711119.1;transcript_id=HG002_chrY_T0000118;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000118;transcript_name=HG002_chrY_T0000118;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000118:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1265729	1276304	1000	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=HG002_chrY_T0000119;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_G0000031;transcript_name=HG002_chrY_T0000119;gene_name=ASMTL-AS1;ID=HG002_chrY_T0000119;Name=ASMTL-AS1
HG002_chrY	CAT	exon	1265729	1266143	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=HG002_chrY_T0000119;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000119;transcript_name=HG002_chrY_T0000119;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000119:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1266144	1267295	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=HG002_chrY_T0000119;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000119;transcript_name=HG002_chrY_T0000119;gene_name=ASMTL-AS1;ID=intron:HG002_chrY_T0000119:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1267296	1267420	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=HG002_chrY_T0000119;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000119;transcript_name=HG002_chrY_T0000119;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000119:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1267421	1275131	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=HG002_chrY_T0000119;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000119;transcript_name=HG002_chrY_T0000119;gene_name=ASMTL-AS1;ID=intron:HG002_chrY_T0000119:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1275132	1275277	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=HG002_chrY_T0000119;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000119;transcript_name=HG002_chrY_T0000119;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000119:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1275278	1276150	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=HG002_chrY_T0000119;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000119;transcript_name=HG002_chrY_T0000119;gene_name=ASMTL-AS1;ID=intron:HG002_chrY_T0000119:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1276151	1276304	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=HG002_chrY_T0000119;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000119;transcript_name=HG002_chrY_T0000119;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000119:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1265894	1275975	1000	+	.	source_transcript=ENST00000850712.1;source_transcript_name=ASMTL-AS1-218;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850712.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850712.1,ENST00000850712.1;transcript_id=HG002_chrY_T0000120;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_G0000031;transcript_name=HG002_chrY_T0000120;gene_name=ASMTL-AS1;ID=HG002_chrY_T0000120;Name=ASMTL-AS1
HG002_chrY	CAT	exon	1265894	1266143	.	+	.	source_transcript=ENST00000850712.1;source_transcript_name=ASMTL-AS1-218;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850712.1,ENST00000850712.1;transcript_id=HG002_chrY_T0000120;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000120;transcript_name=HG002_chrY_T0000120;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000120:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1266144	1267295	.	+	.	source_transcript=ENST00000850712.1;source_transcript_name=ASMTL-AS1-218;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850712.1,ENST00000850712.1;transcript_id=HG002_chrY_T0000120;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000120;transcript_name=HG002_chrY_T0000120;gene_name=ASMTL-AS1;ID=intron:HG002_chrY_T0000120:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1267296	1267420	.	+	.	source_transcript=ENST00000850712.1;source_transcript_name=ASMTL-AS1-218;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850712.1,ENST00000850712.1;transcript_id=HG002_chrY_T0000120;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000120;transcript_name=HG002_chrY_T0000120;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000120:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1267421	1275131	.	+	.	source_transcript=ENST00000850712.1;source_transcript_name=ASMTL-AS1-218;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850712.1,ENST00000850712.1;transcript_id=HG002_chrY_T0000120;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000120;transcript_name=HG002_chrY_T0000120;gene_name=ASMTL-AS1;ID=intron:HG002_chrY_T0000120:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1275132	1275975	.	+	.	source_transcript=ENST00000850712.1;source_transcript_name=ASMTL-AS1-218;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850712.1,ENST00000850712.1;transcript_id=HG002_chrY_T0000120;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000120;transcript_name=HG002_chrY_T0000120;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000120:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1267016	1275975	1000	+	.	source_transcript=ENST00000850713.1;source_transcript_name=ASMTL-AS1-219;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850713.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850713.1,ENST00000850713.1;transcript_id=HG002_chrY_T0000126;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_G0000031;transcript_name=HG002_chrY_T0000126;gene_name=ASMTL-AS1;ID=HG002_chrY_T0000126;Name=ASMTL-AS1
HG002_chrY	CAT	exon	1267016	1267420	.	+	.	source_transcript=ENST00000850713.1;source_transcript_name=ASMTL-AS1-219;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850713.1,ENST00000850713.1;transcript_id=HG002_chrY_T0000126;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000126;transcript_name=HG002_chrY_T0000126;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000126:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1267421	1275131	.	+	.	source_transcript=ENST00000850713.1;source_transcript_name=ASMTL-AS1-219;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850713.1,ENST00000850713.1;transcript_id=HG002_chrY_T0000126;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000126;transcript_name=HG002_chrY_T0000126;gene_name=ASMTL-AS1;ID=intron:HG002_chrY_T0000126:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1275132	1275975	.	+	.	source_transcript=ENST00000850713.1;source_transcript_name=ASMTL-AS1-219;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850713.1,ENST00000850713.1;transcript_id=HG002_chrY_T0000126;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000126;transcript_name=HG002_chrY_T0000126;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000126:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1267294	1276417	1000	+	.	source_transcript=ENST00000711117.1;source_transcript_name=ASMTL-AS1-212;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711117.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711117.1,ENST00000711117.1;transcript_id=HG002_chrY_T0000127;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_G0000031;transcript_name=HG002_chrY_T0000127;gene_name=ASMTL-AS1;ID=HG002_chrY_T0000127;Name=ASMTL-AS1
HG002_chrY	CAT	exon	1267294	1267420	.	+	.	source_transcript=ENST00000711117.1;source_transcript_name=ASMTL-AS1-212;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711117.1,ENST00000711117.1;transcript_id=HG002_chrY_T0000127;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000127;transcript_name=HG002_chrY_T0000127;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000127:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1267421	1275131	.	+	.	source_transcript=ENST00000711117.1;source_transcript_name=ASMTL-AS1-212;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711117.1,ENST00000711117.1;transcript_id=HG002_chrY_T0000127;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000127;transcript_name=HG002_chrY_T0000127;gene_name=ASMTL-AS1;ID=intron:HG002_chrY_T0000127:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1275132	1275277	.	+	.	source_transcript=ENST00000711117.1;source_transcript_name=ASMTL-AS1-212;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711117.1,ENST00000711117.1;transcript_id=HG002_chrY_T0000127;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000127;transcript_name=HG002_chrY_T0000127;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000127:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1275278	1276137	.	+	.	source_transcript=ENST00000711117.1;source_transcript_name=ASMTL-AS1-212;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711117.1,ENST00000711117.1;transcript_id=HG002_chrY_T0000127;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000127;transcript_name=HG002_chrY_T0000127;gene_name=ASMTL-AS1;ID=intron:HG002_chrY_T0000127:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1276138	1276417	.	+	.	source_transcript=ENST00000711117.1;source_transcript_name=ASMTL-AS1-212;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711117.1,ENST00000711117.1;transcript_id=HG002_chrY_T0000127;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000127;transcript_name=HG002_chrY_T0000127;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000127:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1267345	1276413	1000	+	.	source_transcript=ENST00000711116.1;source_transcript_name=ASMTL-AS1-211;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711116.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711116.1,ENST00000711116.1;transcript_id=HG002_chrY_T0000128;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_G0000031;transcript_name=HG002_chrY_T0000128;gene_name=ASMTL-AS1;ID=HG002_chrY_T0000128;Name=ASMTL-AS1
HG002_chrY	CAT	exon	1267345	1267420	.	+	.	source_transcript=ENST00000711116.1;source_transcript_name=ASMTL-AS1-211;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711116.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711116.1,ENST00000711116.1;transcript_id=HG002_chrY_T0000128;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000128;transcript_name=HG002_chrY_T0000128;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000128:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1267421	1275179	.	+	.	source_transcript=ENST00000711116.1;source_transcript_name=ASMTL-AS1-211;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711116.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711116.1,ENST00000711116.1;transcript_id=HG002_chrY_T0000128;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000128;transcript_name=HG002_chrY_T0000128;gene_name=ASMTL-AS1;ID=intron:HG002_chrY_T0000128:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1275180	1275277	.	+	.	source_transcript=ENST00000711116.1;source_transcript_name=ASMTL-AS1-211;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711116.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711116.1,ENST00000711116.1;transcript_id=HG002_chrY_T0000128;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000128;transcript_name=HG002_chrY_T0000128;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000128:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1275278	1276152	.	+	.	source_transcript=ENST00000711116.1;source_transcript_name=ASMTL-AS1-211;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711116.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711116.1,ENST00000711116.1;transcript_id=HG002_chrY_T0000128;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000128;transcript_name=HG002_chrY_T0000128;gene_name=ASMTL-AS1;ID=intron:HG002_chrY_T0000128:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1276153	1276413	.	+	.	source_transcript=ENST00000711116.1;source_transcript_name=ASMTL-AS1-211;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711116.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711116.1,ENST00000711116.1;transcript_id=HG002_chrY_T0000128;gene_id=HG002_chrY_G0000031;Parent=HG002_chrY_T0000128;transcript_name=HG002_chrY_T0000128;gene_name=ASMTL-AS1;ID=exon:HG002_chrY_T0000128:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	1266974	1317016	.	-	.	source_gene_common_name=ASMTL;source_gene=ENSG00000292339.1;gene_id=HG002_chrY_G0000032;gene_biotype=protein_coding;gene_name=ASMTL;gene_sources=liftoff,transMap,transMap_pairwise;ID=HG002_chrY_G0000032;Name=ASMTL
HG002_chrY	CAT	transcript	1266974	1316940	9980	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_G0000032;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=HG002_chrY_T0000121;Name=ASMTL
HG002_chrY	CAT	exon	1266974	1267324	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=exon:HG002_chrY_T0000121:0;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1267104	1267324	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000121:0;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1267104	1267106	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=stop_codon:HG002_chrY_T0000121;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1267325	1275120	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=intron:HG002_chrY_T0000121:0;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1275121	1275243	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=exon:HG002_chrY_T0000121:1;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1275121	1275243	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000121:1;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1275244	1280374	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=intron:HG002_chrY_T0000121:1;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1280375	1280518	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=exon:HG002_chrY_T0000121:2;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1280375	1280518	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000121:2;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1280519	1281383	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=intron:HG002_chrY_T0000121:2;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1281384	1281516	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=exon:HG002_chrY_T0000121:3;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1281384	1281516	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000121:3;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1281517	1284072	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=intron:HG002_chrY_T0000121:3;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1284073	1284257	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=exon:HG002_chrY_T0000121:4;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1284073	1284257	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000121:4;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1284258	1287939	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=intron:HG002_chrY_T0000121:4;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1287940	1288102	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=exon:HG002_chrY_T0000121:5;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1287940	1288102	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000121:5;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1288103	1290148	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=intron:HG002_chrY_T0000121:5;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1290149	1290536	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=exon:HG002_chrY_T0000121:6;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1290149	1290536	.	-	1	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000121:6;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1290537	1294682	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=intron:HG002_chrY_T0000121:6;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1294683	1294791	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=exon:HG002_chrY_T0000121:7;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1294683	1294791	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000121:7;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1294792	1298244	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=intron:HG002_chrY_T0000121:7;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1298245	1298306	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=exon:HG002_chrY_T0000121:8;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1298245	1298306	.	-	1	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000121:8;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1298307	1298915	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=intron:HG002_chrY_T0000121:8;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1298916	1298980	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=exon:HG002_chrY_T0000121:9;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1298916	1298980	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000121:9;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1298981	1302317	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=intron:HG002_chrY_T0000121:9;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1302318	1302365	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=exon:HG002_chrY_T0000121:10;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1302318	1302365	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000121:10;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1302366	1305406	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=intron:HG002_chrY_T0000121:10;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1305407	1305538	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=exon:HG002_chrY_T0000121:11;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1305407	1305457	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000121:11;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1305455	1305457	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=start_codon:HG002_chrY_T0000121;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1305539	1316605	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=intron:HG002_chrY_T0000121:11;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1316606	1316742	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=exon:HG002_chrY_T0000121:12;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1316743	1316932	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=intron:HG002_chrY_T0000121:12;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1316933	1316940	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000121;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000121;transcript_name=HG002_chrY_T0000121;gene_name=ASMTL;ID=exon:HG002_chrY_T0000121:13;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1266974	1315897	100	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_G0000032;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=HG002_chrY_T0000122;Name=ASMTL
HG002_chrY	CAT	exon	1266974	1267324	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=exon:HG002_chrY_T0000122:0;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1267104	1267324	.	-	2	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000122:0;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1267104	1267106	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=stop_codon:HG002_chrY_T0000122;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1267325	1275120	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=intron:HG002_chrY_T0000122:0;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1275121	1275243	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=exon:HG002_chrY_T0000122:1;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1275121	1275243	.	-	2	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000122:1;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1275244	1280374	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=intron:HG002_chrY_T0000122:1;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1280375	1280518	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=exon:HG002_chrY_T0000122:2;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1280375	1280518	.	-	2	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000122:2;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1280519	1281383	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=intron:HG002_chrY_T0000122:2;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1281384	1281516	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=exon:HG002_chrY_T0000122:3;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1281384	1281516	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000122:3;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1281517	1284072	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=intron:HG002_chrY_T0000122:3;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1284073	1284257	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=exon:HG002_chrY_T0000122:4;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1284073	1284257	.	-	2	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000122:4;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1284258	1287939	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=intron:HG002_chrY_T0000122:4;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1287940	1288102	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=exon:HG002_chrY_T0000122:5;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1287940	1288102	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000122:5;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1288103	1290148	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=intron:HG002_chrY_T0000122:5;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1290149	1290536	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=exon:HG002_chrY_T0000122:6;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1290149	1290536	.	-	1	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000122:6;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1290537	1294682	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=intron:HG002_chrY_T0000122:6;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1294683	1294791	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=exon:HG002_chrY_T0000122:7;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1294683	1294791	.	-	2	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000122:7;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1294792	1298244	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=intron:HG002_chrY_T0000122:7;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1298245	1298306	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=exon:HG002_chrY_T0000122:8;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1298245	1298306	.	-	1	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000122:8;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1298307	1298915	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=intron:HG002_chrY_T0000122:8;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1298916	1298980	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=exon:HG002_chrY_T0000122:9;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1298916	1298980	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000122:9;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1298981	1302317	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=intron:HG002_chrY_T0000122:9;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1302318	1302365	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=exon:HG002_chrY_T0000122:10;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1302318	1302365	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000122:10;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1302366	1305406	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=intron:HG002_chrY_T0000122:10;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1305407	1305538	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=exon:HG002_chrY_T0000122:11;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1305407	1305538	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000122:11;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1305539	1315735	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=intron:HG002_chrY_T0000122:11;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1315736	1315897	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=exon:HG002_chrY_T0000122:12;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1315736	1315828	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000122:12;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1315826	1315828	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=HG002_chrY_T0000122;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000122;transcript_name=HG002_chrY_T0000122;gene_name=ASMTL;ID=start_codon:HG002_chrY_T0000122;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1266974	1317016	9980	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_G0000032;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=HG002_chrY_T0000123;Name=ASMTL
HG002_chrY	CAT	exon	1266974	1267324	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=exon:HG002_chrY_T0000123:0;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1267104	1267324	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000123:0;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1267104	1267106	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=stop_codon:HG002_chrY_T0000123;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1267325	1275120	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=intron:HG002_chrY_T0000123:0;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1275121	1275243	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=exon:HG002_chrY_T0000123:1;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1275121	1275243	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000123:1;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1275244	1280374	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=intron:HG002_chrY_T0000123:1;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1280375	1280518	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=exon:HG002_chrY_T0000123:2;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1280375	1280518	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000123:2;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1280519	1281383	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=intron:HG002_chrY_T0000123:2;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1281384	1281516	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=exon:HG002_chrY_T0000123:3;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1281384	1281516	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000123:3;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1281517	1284072	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=intron:HG002_chrY_T0000123:3;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1284073	1284257	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=exon:HG002_chrY_T0000123:4;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1284073	1284257	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000123:4;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1284258	1287939	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=intron:HG002_chrY_T0000123:4;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1287940	1288102	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=exon:HG002_chrY_T0000123:5;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1287940	1288102	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000123:5;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1288103	1290148	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=intron:HG002_chrY_T0000123:5;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1290149	1290536	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=exon:HG002_chrY_T0000123:6;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1290149	1290536	.	-	1	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000123:6;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1290537	1294682	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=intron:HG002_chrY_T0000123:6;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1294683	1294791	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=exon:HG002_chrY_T0000123:7;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1294683	1294791	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000123:7;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1294792	1298244	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=intron:HG002_chrY_T0000123:7;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1298245	1298306	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=exon:HG002_chrY_T0000123:8;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1298245	1298306	.	-	1	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000123:8;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1298307	1298915	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=intron:HG002_chrY_T0000123:8;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1298916	1298980	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=exon:HG002_chrY_T0000123:9;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1298916	1298980	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000123:9;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1298981	1302317	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=intron:HG002_chrY_T0000123:9;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1302318	1302365	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=exon:HG002_chrY_T0000123:10;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1302318	1302365	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000123:10;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1302366	1305406	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=intron:HG002_chrY_T0000123:10;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1305407	1305538	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=exon:HG002_chrY_T0000123:11;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1305407	1305457	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000123:11;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1305455	1305457	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=start_codon:HG002_chrY_T0000123;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1305539	1316605	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=intron:HG002_chrY_T0000123:11;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1316606	1316726	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=exon:HG002_chrY_T0000123:12;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1316727	1316992	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=intron:HG002_chrY_T0000123:12;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1316993	1317016	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000123;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000123;transcript_name=HG002_chrY_T0000123;gene_name=ASMTL;ID=exon:HG002_chrY_T0000123:13;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1266974	1316750	100	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_G0000032;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=HG002_chrY_T0000124;Name=ASMTL
HG002_chrY	CAT	exon	1266974	1267324	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=exon:HG002_chrY_T0000124:0;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1267104	1267324	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000124:0;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1267104	1267106	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=stop_codon:HG002_chrY_T0000124;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1267325	1275120	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=intron:HG002_chrY_T0000124:0;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1275121	1275243	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=exon:HG002_chrY_T0000124:1;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1275121	1275243	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000124:1;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1275244	1280374	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=intron:HG002_chrY_T0000124:1;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1280375	1280518	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=exon:HG002_chrY_T0000124:2;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1280375	1280518	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000124:2;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1280519	1281383	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=intron:HG002_chrY_T0000124:2;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1281384	1281516	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=exon:HG002_chrY_T0000124:3;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1281384	1281516	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000124:3;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1281517	1284072	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=intron:HG002_chrY_T0000124:3;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1284073	1284257	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=exon:HG002_chrY_T0000124:4;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1284073	1284257	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000124:4;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1284258	1287939	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=intron:HG002_chrY_T0000124:4;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1287940	1288102	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=exon:HG002_chrY_T0000124:5;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1287940	1288102	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000124:5;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1288103	1290148	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=intron:HG002_chrY_T0000124:5;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1290149	1290536	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=exon:HG002_chrY_T0000124:6;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1290149	1290536	.	-	1	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000124:6;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1290537	1294682	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=intron:HG002_chrY_T0000124:6;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1294683	1294791	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=exon:HG002_chrY_T0000124:7;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1294683	1294791	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000124:7;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1294792	1298244	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=intron:HG002_chrY_T0000124:7;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1298245	1298306	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=exon:HG002_chrY_T0000124:8;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1298245	1298306	.	-	1	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000124:8;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1298307	1298915	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=intron:HG002_chrY_T0000124:8;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1298916	1298980	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=exon:HG002_chrY_T0000124:9;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1298916	1298980	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000124:9;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1298981	1302317	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=intron:HG002_chrY_T0000124:9;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1302318	1302365	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=exon:HG002_chrY_T0000124:10;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1302318	1302365	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000124:10;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1302366	1305406	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=intron:HG002_chrY_T0000124:10;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1305407	1305538	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=exon:HG002_chrY_T0000124:11;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1305407	1305457	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000124:11;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1305455	1305457	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=start_codon:HG002_chrY_T0000124;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1305539	1316605	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=intron:HG002_chrY_T0000124:11;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1316606	1316750	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG002_chrY_T0000124;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000124;transcript_name=HG002_chrY_T0000124;gene_name=ASMTL;ID=exon:HG002_chrY_T0000124:12;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1266976	1315917	100	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_G0000032;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=HG002_chrY_T0000125;Name=ASMTL
HG002_chrY	CAT	exon	1266976	1267324	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=exon:HG002_chrY_T0000125:0;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1267104	1267324	.	-	2	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000125:0;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1267104	1267106	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=stop_codon:HG002_chrY_T0000125;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1267325	1275120	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=intron:HG002_chrY_T0000125:0;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1275121	1275243	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=exon:HG002_chrY_T0000125:1;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1275121	1275243	.	-	2	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000125:1;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1275244	1280374	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=intron:HG002_chrY_T0000125:1;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1280375	1280518	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=exon:HG002_chrY_T0000125:2;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1280375	1280518	.	-	2	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000125:2;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1280519	1281383	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=intron:HG002_chrY_T0000125:2;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1281384	1281516	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=exon:HG002_chrY_T0000125:3;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1281384	1281516	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000125:3;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1281517	1284072	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=intron:HG002_chrY_T0000125:3;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1284073	1284257	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=exon:HG002_chrY_T0000125:4;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1284073	1284257	.	-	2	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000125:4;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1284258	1287939	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=intron:HG002_chrY_T0000125:4;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1287940	1288102	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=exon:HG002_chrY_T0000125:5;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1287940	1288102	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000125:5;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1288103	1290148	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=intron:HG002_chrY_T0000125:5;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1290149	1290536	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=exon:HG002_chrY_T0000125:6;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1290149	1290536	.	-	1	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000125:6;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1290537	1294682	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=intron:HG002_chrY_T0000125:6;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1294683	1294791	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=exon:HG002_chrY_T0000125:7;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1294683	1294791	.	-	2	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000125:7;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1294792	1298244	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=intron:HG002_chrY_T0000125:7;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1298245	1298306	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=exon:HG002_chrY_T0000125:8;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1298245	1298306	.	-	1	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000125:8;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1298307	1298915	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=intron:HG002_chrY_T0000125:8;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1298916	1298980	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=exon:HG002_chrY_T0000125:9;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1298916	1298980	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000125:9;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1298981	1305406	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=intron:HG002_chrY_T0000125:9;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1305407	1305538	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=exon:HG002_chrY_T0000125:10;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1305407	1305538	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000125:10;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1305539	1315735	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=intron:HG002_chrY_T0000125:10;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1315736	1315917	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=exon:HG002_chrY_T0000125:11;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1315736	1315828	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=CDS:HG002_chrY_T0000125:11;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1315826	1315828	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=HG002_chrY_T0000125;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000125;transcript_name=HG002_chrY_T0000125;gene_name=ASMTL;ID=start_codon:HG002_chrY_T0000125;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1290142	1298613	1000	-	.	source_transcript=ENST00000711195.1;source_transcript_name=ASMTL-210;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711195.1;transcript_score=299.543;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711195.1,ENST00000711195.1;transcript_id=HG002_chrY_T0000129;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_G0000032;transcript_name=HG002_chrY_T0000129;gene_name=ASMTL;ID=HG002_chrY_T0000129;Name=ASMTL
HG002_chrY	CAT	exon	1290142	1290536	.	-	.	source_transcript=ENST00000711195.1;source_transcript_name=ASMTL-210;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711195.1;transcript_score=299.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711195.1,ENST00000711195.1;transcript_id=HG002_chrY_T0000129;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000129;transcript_name=HG002_chrY_T0000129;gene_name=ASMTL;ID=exon:HG002_chrY_T0000129:0;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1290537	1294682	.	-	.	source_transcript=ENST00000711195.1;source_transcript_name=ASMTL-210;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711195.1;transcript_score=299.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711195.1,ENST00000711195.1;transcript_id=HG002_chrY_T0000129;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000129;transcript_name=HG002_chrY_T0000129;gene_name=ASMTL;ID=intron:HG002_chrY_T0000129:0;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1294683	1294791	.	-	.	source_transcript=ENST00000711195.1;source_transcript_name=ASMTL-210;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711195.1;transcript_score=299.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711195.1,ENST00000711195.1;transcript_id=HG002_chrY_T0000129;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000129;transcript_name=HG002_chrY_T0000129;gene_name=ASMTL;ID=exon:HG002_chrY_T0000129:1;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1294792	1298244	.	-	.	source_transcript=ENST00000711195.1;source_transcript_name=ASMTL-210;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711195.1;transcript_score=299.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711195.1,ENST00000711195.1;transcript_id=HG002_chrY_T0000129;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000129;transcript_name=HG002_chrY_T0000129;gene_name=ASMTL;ID=intron:HG002_chrY_T0000129:1;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1298245	1298613	.	-	.	source_transcript=ENST00000711195.1;source_transcript_name=ASMTL-210;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711195.1;transcript_score=299.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711195.1,ENST00000711195.1;transcript_id=HG002_chrY_T0000129;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000129;transcript_name=HG002_chrY_T0000129;gene_name=ASMTL;ID=exon:HG002_chrY_T0000129:2;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1294316	1298950	1000	-	.	source_transcript=ENST00000711194.1;source_transcript_name=ASMTL-209;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711194.1;transcript_score=299.825;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711194.1,ENST00000711194.1;transcript_id=HG002_chrY_T0000130;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_G0000032;transcript_name=HG002_chrY_T0000130;gene_name=ASMTL;ID=HG002_chrY_T0000130;Name=ASMTL
HG002_chrY	CAT	exon	1294316	1294791	.	-	.	source_transcript=ENST00000711194.1;source_transcript_name=ASMTL-209;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711194.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711194.1,ENST00000711194.1;transcript_id=HG002_chrY_T0000130;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000130;transcript_name=HG002_chrY_T0000130;gene_name=ASMTL;ID=exon:HG002_chrY_T0000130:0;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1294792	1298244	.	-	.	source_transcript=ENST00000711194.1;source_transcript_name=ASMTL-209;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711194.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711194.1,ENST00000711194.1;transcript_id=HG002_chrY_T0000130;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000130;transcript_name=HG002_chrY_T0000130;gene_name=ASMTL;ID=intron:HG002_chrY_T0000130:0;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1298245	1298306	.	-	.	source_transcript=ENST00000711194.1;source_transcript_name=ASMTL-209;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711194.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711194.1,ENST00000711194.1;transcript_id=HG002_chrY_T0000130;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000130;transcript_name=HG002_chrY_T0000130;gene_name=ASMTL;ID=exon:HG002_chrY_T0000130:1;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1298307	1298915	.	-	.	source_transcript=ENST00000711194.1;source_transcript_name=ASMTL-209;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711194.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711194.1,ENST00000711194.1;transcript_id=HG002_chrY_T0000130;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000130;transcript_name=HG002_chrY_T0000130;gene_name=ASMTL;ID=intron:HG002_chrY_T0000130:1;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1298916	1298950	.	-	.	source_transcript=ENST00000711194.1;source_transcript_name=ASMTL-209;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711194.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711194.1,ENST00000711194.1;transcript_id=HG002_chrY_T0000130;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000130;transcript_name=HG002_chrY_T0000130;gene_name=ASMTL;ID=exon:HG002_chrY_T0000130:2;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1304813	1315860	1000	-	.	source_transcript=ENST00000711193.1;source_transcript_name=ASMTL-208;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711193.1;transcript_score=299.882;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711193.1,ENST00000711193.1;transcript_id=HG002_chrY_T0000131;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_G0000032;transcript_name=HG002_chrY_T0000131;gene_name=ASMTL;ID=HG002_chrY_T0000131;Name=ASMTL
HG002_chrY	CAT	exon	1304813	1305538	.	-	.	source_transcript=ENST00000711193.1;source_transcript_name=ASMTL-208;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711193.1;transcript_score=299.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711193.1,ENST00000711193.1;transcript_id=HG002_chrY_T0000131;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000131;transcript_name=HG002_chrY_T0000131;gene_name=ASMTL;ID=exon:HG002_chrY_T0000131:0;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1305539	1315735	.	-	.	source_transcript=ENST00000711193.1;source_transcript_name=ASMTL-208;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711193.1;transcript_score=299.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711193.1,ENST00000711193.1;transcript_id=HG002_chrY_T0000131;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000131;transcript_name=HG002_chrY_T0000131;gene_name=ASMTL;ID=intron:HG002_chrY_T0000131:0;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1315736	1315860	.	-	.	source_transcript=ENST00000711193.1;source_transcript_name=ASMTL-208;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711193.1;transcript_score=299.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711193.1,ENST00000711193.1;transcript_id=HG002_chrY_T0000131;gene_id=HG002_chrY_G0000032;Parent=HG002_chrY_T0000131;transcript_name=HG002_chrY_T0000131;gene_name=ASMTL;ID=exon:HG002_chrY_T0000131:1;Name=ASMTL;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	1325960	1401522	.	-	.	source_gene_common_name=P2RY8;source_gene=ENSG00000292333.1;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;gene_id=HG002_chrY_G0000033;gene_biotype=protein_coding;gene_name=P2RY8;gene_sources=liftoff;ID=HG002_chrY_G0000033;Name=P2RY8
HG002_chrY	CAT	transcript	1325960	1401522	100	-	.	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=HG002_chrY_T0000132;gene_id=HG002_chrY_G0000033;Parent=HG002_chrY_G0000033;transcript_name=HG002_chrY_T0000132;gene_name=P2RY8;ID=HG002_chrY_T0000132;Name=P2RY8
HG002_chrY	CAT	exon	1325960	1329959	.	-	.	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=HG002_chrY_T0000132;gene_id=HG002_chrY_G0000033;Parent=HG002_chrY_T0000132;transcript_name=HG002_chrY_T0000132;gene_name=P2RY8;ID=exon:HG002_chrY_T0000132:0;Name=P2RY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1328856	1329935	.	-	0	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=HG002_chrY_T0000132;gene_id=HG002_chrY_G0000033;Parent=HG002_chrY_T0000132;transcript_name=HG002_chrY_T0000132;gene_name=P2RY8;ID=CDS:HG002_chrY_T0000132:0;Name=P2RY8;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1328856	1328858	.	-	0	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=HG002_chrY_T0000132;gene_id=HG002_chrY_G0000033;Parent=HG002_chrY_T0000132;transcript_name=HG002_chrY_T0000132;gene_name=P2RY8;ID=stop_codon:HG002_chrY_T0000132;Name=P2RY8;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1329933	1329935	.	-	0	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=HG002_chrY_T0000132;gene_id=HG002_chrY_G0000033;Parent=HG002_chrY_T0000132;transcript_name=HG002_chrY_T0000132;gene_name=P2RY8;ID=start_codon:HG002_chrY_T0000132;Name=P2RY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1329960	1401257	.	-	.	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=HG002_chrY_T0000132;gene_id=HG002_chrY_G0000033;Parent=HG002_chrY_T0000132;transcript_name=HG002_chrY_T0000132;gene_name=P2RY8;ID=intron:HG002_chrY_T0000132:0;Name=P2RY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1401258	1401522	.	-	.	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=HG002_chrY_T0000132;gene_id=HG002_chrY_G0000033;Parent=HG002_chrY_T0000132;transcript_name=HG002_chrY_T0000132;gene_name=P2RY8;ID=exon:HG002_chrY_T0000132:1;Name=P2RY8;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1329814	1358407	100	-	.	source_transcript=ENST00000711215.1;source_transcript_name=P2RY8-203;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711215.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711215.1,ENST00000711215.1;transcript_id=HG002_chrY_T0000133;gene_id=HG002_chrY_G0000033;Parent=HG002_chrY_G0000033;transcript_name=HG002_chrY_T0000133;gene_name=P2RY8;ID=HG002_chrY_T0000133;Name=P2RY8
HG002_chrY	CAT	exon	1329814	1329959	.	-	.	source_transcript=ENST00000711215.1;source_transcript_name=P2RY8-203;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711215.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711215.1,ENST00000711215.1;transcript_id=HG002_chrY_T0000133;gene_id=HG002_chrY_G0000033;Parent=HG002_chrY_T0000133;transcript_name=HG002_chrY_T0000133;gene_name=P2RY8;ID=exon:HG002_chrY_T0000133:0;Name=P2RY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1329814	1329935	.	-	0	source_transcript=ENST00000711215.1;source_transcript_name=P2RY8-203;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711215.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711215.1,ENST00000711215.1;transcript_id=HG002_chrY_T0000133;gene_id=HG002_chrY_G0000033;Parent=HG002_chrY_T0000133;transcript_name=HG002_chrY_T0000133;gene_name=P2RY8;ID=CDS:HG002_chrY_T0000133:0;Name=P2RY8;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1329933	1329935	.	-	0	source_transcript=ENST00000711215.1;source_transcript_name=P2RY8-203;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711215.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711215.1,ENST00000711215.1;transcript_id=HG002_chrY_T0000133;gene_id=HG002_chrY_G0000033;Parent=HG002_chrY_T0000133;transcript_name=HG002_chrY_T0000133;gene_name=P2RY8;ID=start_codon:HG002_chrY_T0000133;Name=P2RY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1329960	1358146	.	-	.	source_transcript=ENST00000711215.1;source_transcript_name=P2RY8-203;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711215.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711215.1,ENST00000711215.1;transcript_id=HG002_chrY_T0000133;gene_id=HG002_chrY_G0000033;Parent=HG002_chrY_T0000133;transcript_name=HG002_chrY_T0000133;gene_name=P2RY8;ID=intron:HG002_chrY_T0000133:0;Name=P2RY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1358147	1358407	.	-	.	source_transcript=ENST00000711215.1;source_transcript_name=P2RY8-203;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711215.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711215.1,ENST00000711215.1;transcript_id=HG002_chrY_T0000133;gene_id=HG002_chrY_G0000033;Parent=HG002_chrY_T0000133;transcript_name=HG002_chrY_T0000133;gene_name=P2RY8;ID=exon:HG002_chrY_T0000133:1;Name=P2RY8;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	1417068	1429336	.	-	.	source_gene_common_name=ENSG00000310546;source_gene=ENSG00000310546.1;alternative_source_transcripts=ENST00000850708.1,ENST00000850708.1;gene_id=HG002_chrY_G0000034;gene_biotype=lncRNA;gene_name=ENSG00000310546;gene_sources=liftoff;ID=HG002_chrY_G0000034;Name=ENSG00000310546
HG002_chrY	CAT	transcript	1417068	1429336	1000	-	.	source_transcript=ENST00000850708.1;source_transcript_name=ENST00000850708;source_gene=ENSG00000310546.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310546.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850708.1;transcript_score=299.86;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310546;alternative_source_transcripts=ENST00000850708.1,ENST00000850708.1;transcript_id=HG002_chrY_T0000134;gene_id=HG002_chrY_G0000034;Parent=HG002_chrY_G0000034;transcript_name=HG002_chrY_T0000134;gene_name=ENSG00000310546;ID=HG002_chrY_T0000134;Name=ENSG00000310546
HG002_chrY	CAT	exon	1417068	1417681	.	-	.	source_transcript=ENST00000850708.1;source_transcript_name=ENST00000850708;source_gene=ENSG00000310546.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310546.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850708.1;transcript_score=299.86;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310546;alternative_source_transcripts=ENST00000850708.1,ENST00000850708.1;transcript_id=HG002_chrY_T0000134;gene_id=HG002_chrY_G0000034;Parent=HG002_chrY_T0000134;transcript_name=HG002_chrY_T0000134;gene_name=ENSG00000310546;ID=exon:HG002_chrY_T0000134:0;Name=ENSG00000310546;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1417682	1429234	.	-	.	source_transcript=ENST00000850708.1;source_transcript_name=ENST00000850708;source_gene=ENSG00000310546.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310546.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850708.1;transcript_score=299.86;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310546;alternative_source_transcripts=ENST00000850708.1,ENST00000850708.1;transcript_id=HG002_chrY_T0000134;gene_id=HG002_chrY_G0000034;Parent=HG002_chrY_T0000134;transcript_name=HG002_chrY_T0000134;gene_name=ENSG00000310546;ID=intron:HG002_chrY_T0000134:0;Name=ENSG00000310546;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1429235	1429336	.	-	.	source_transcript=ENST00000850708.1;source_transcript_name=ENST00000850708;source_gene=ENSG00000310546.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310546.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850708.1;transcript_score=299.86;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310546;alternative_source_transcripts=ENST00000850708.1,ENST00000850708.1;transcript_id=HG002_chrY_T0000134;gene_id=HG002_chrY_G0000034;Parent=HG002_chrY_T0000134;transcript_name=HG002_chrY_T0000134;gene_name=ENSG00000310546;ID=exon:HG002_chrY_T0000134:1;Name=ENSG00000310546;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	1456001	1466658	.	+	.	source_gene_common_name=AKAP17A;source_gene=ENSG00000292343.1;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;gene_id=HG002_chrY_G0000035;gene_biotype=protein_coding;gene_name=AKAP17A;gene_sources=liftoff;ID=HG002_chrY_G0000035;Name=AKAP17A
HG002_chrY	CAT	transcript	1456001	1466658	100	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG002_chrY_T0000135;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_G0000035;transcript_name=HG002_chrY_T0000135;gene_name=AKAP17A;ID=HG002_chrY_T0000135;Name=AKAP17A
HG002_chrY	CAT	exon	1456001	1456166	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG002_chrY_T0000135;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000135;transcript_name=HG002_chrY_T0000135;gene_name=AKAP17A;ID=exon:HG002_chrY_T0000135:0;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1456167	1457840	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG002_chrY_T0000135;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000135;transcript_name=HG002_chrY_T0000135;gene_name=AKAP17A;ID=intron:HG002_chrY_T0000135:0;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1457841	1458621	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG002_chrY_T0000135;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000135;transcript_name=HG002_chrY_T0000135;gene_name=AKAP17A;ID=exon:HG002_chrY_T0000135:1;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1457860	1458621	.	+	0	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG002_chrY_T0000135;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000135;transcript_name=HG002_chrY_T0000135;gene_name=AKAP17A;ID=CDS:HG002_chrY_T0000135:0;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1457860	1457862	.	+	0	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG002_chrY_T0000135;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000135;transcript_name=HG002_chrY_T0000135;gene_name=AKAP17A;ID=start_codon:HG002_chrY_T0000135;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1458622	1459773	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG002_chrY_T0000135;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000135;transcript_name=HG002_chrY_T0000135;gene_name=AKAP17A;ID=intron:HG002_chrY_T0000135:1;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1459774	1459922	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG002_chrY_T0000135;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000135;transcript_name=HG002_chrY_T0000135;gene_name=AKAP17A;ID=exon:HG002_chrY_T0000135:2;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1459774	1459922	.	+	0	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG002_chrY_T0000135;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000135;transcript_name=HG002_chrY_T0000135;gene_name=AKAP17A;ID=CDS:HG002_chrY_T0000135:1;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1459923	1463329	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG002_chrY_T0000135;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000135;transcript_name=HG002_chrY_T0000135;gene_name=AKAP17A;ID=intron:HG002_chrY_T0000135:2;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1463330	1463570	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG002_chrY_T0000135;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000135;transcript_name=HG002_chrY_T0000135;gene_name=AKAP17A;ID=exon:HG002_chrY_T0000135:3;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1463330	1463570	.	+	1	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG002_chrY_T0000135;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000135;transcript_name=HG002_chrY_T0000135;gene_name=AKAP17A;ID=CDS:HG002_chrY_T0000135:2;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1463571	1464796	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG002_chrY_T0000135;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000135;transcript_name=HG002_chrY_T0000135;gene_name=AKAP17A;ID=intron:HG002_chrY_T0000135:3;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1464797	1466658	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG002_chrY_T0000135;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000135;transcript_name=HG002_chrY_T0000135;gene_name=AKAP17A;ID=exon:HG002_chrY_T0000135:4;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1464797	1465732	.	+	0	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG002_chrY_T0000135;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000135;transcript_name=HG002_chrY_T0000135;gene_name=AKAP17A;ID=CDS:HG002_chrY_T0000135:3;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1465730	1465732	.	+	0	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG002_chrY_T0000135;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000135;transcript_name=HG002_chrY_T0000135;gene_name=AKAP17A;ID=stop_codon:HG002_chrY_T0000135;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1456020	1466640	1000	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG002_chrY_T0000136;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_G0000035;transcript_name=HG002_chrY_T0000136;gene_name=AKAP17A;ID=HG002_chrY_T0000136;Name=AKAP17A
HG002_chrY	CAT	exon	1456020	1456166	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG002_chrY_T0000136;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000136;transcript_name=HG002_chrY_T0000136;gene_name=AKAP17A;ID=exon:HG002_chrY_T0000136:0;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1456167	1457840	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG002_chrY_T0000136;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000136;transcript_name=HG002_chrY_T0000136;gene_name=AKAP17A;ID=intron:HG002_chrY_T0000136:0;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1457841	1458621	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG002_chrY_T0000136;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000136;transcript_name=HG002_chrY_T0000136;gene_name=AKAP17A;ID=exon:HG002_chrY_T0000136:1;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1457860	1458621	.	+	0	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG002_chrY_T0000136;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000136;transcript_name=HG002_chrY_T0000136;gene_name=AKAP17A;ID=CDS:HG002_chrY_T0000136:0;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1457860	1457862	.	+	0	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG002_chrY_T0000136;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000136;transcript_name=HG002_chrY_T0000136;gene_name=AKAP17A;ID=start_codon:HG002_chrY_T0000136;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1458622	1459773	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG002_chrY_T0000136;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000136;transcript_name=HG002_chrY_T0000136;gene_name=AKAP17A;ID=intron:HG002_chrY_T0000136:1;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1459774	1459922	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG002_chrY_T0000136;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000136;transcript_name=HG002_chrY_T0000136;gene_name=AKAP17A;ID=exon:HG002_chrY_T0000136:2;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1459774	1459922	.	+	0	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG002_chrY_T0000136;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000136;transcript_name=HG002_chrY_T0000136;gene_name=AKAP17A;ID=CDS:HG002_chrY_T0000136:1;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1459923	1463329	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG002_chrY_T0000136;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000136;transcript_name=HG002_chrY_T0000136;gene_name=AKAP17A;ID=intron:HG002_chrY_T0000136:2;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1463330	1463570	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG002_chrY_T0000136;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000136;transcript_name=HG002_chrY_T0000136;gene_name=AKAP17A;ID=exon:HG002_chrY_T0000136:3;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1463330	1463570	.	+	1	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG002_chrY_T0000136;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000136;transcript_name=HG002_chrY_T0000136;gene_name=AKAP17A;ID=CDS:HG002_chrY_T0000136:2;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1463571	1464275	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG002_chrY_T0000136;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000136;transcript_name=HG002_chrY_T0000136;gene_name=AKAP17A;ID=intron:HG002_chrY_T0000136:3;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1464276	1464345	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG002_chrY_T0000136;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000136;transcript_name=HG002_chrY_T0000136;gene_name=AKAP17A;ID=exon:HG002_chrY_T0000136:4;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1464276	1464281	.	+	0	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG002_chrY_T0000136;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000136;transcript_name=HG002_chrY_T0000136;gene_name=AKAP17A;ID=CDS:HG002_chrY_T0000136:3;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1464279	1464281	.	+	0	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG002_chrY_T0000136;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000136;transcript_name=HG002_chrY_T0000136;gene_name=AKAP17A;ID=stop_codon:HG002_chrY_T0000136;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1464346	1464796	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG002_chrY_T0000136;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000136;transcript_name=HG002_chrY_T0000136;gene_name=AKAP17A;ID=intron:HG002_chrY_T0000136:4;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1464797	1466640	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG002_chrY_T0000136;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000136;transcript_name=HG002_chrY_T0000136;gene_name=AKAP17A;ID=exon:HG002_chrY_T0000136:5;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1456022	1464441	100	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG002_chrY_T0000137;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_G0000035;transcript_name=HG002_chrY_T0000137;gene_name=AKAP17A;ID=HG002_chrY_T0000137;Name=AKAP17A
HG002_chrY	CAT	exon	1456022	1456166	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG002_chrY_T0000137;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000137;transcript_name=HG002_chrY_T0000137;gene_name=AKAP17A;ID=exon:HG002_chrY_T0000137:0;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1456167	1457840	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG002_chrY_T0000137;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000137;transcript_name=HG002_chrY_T0000137;gene_name=AKAP17A;ID=intron:HG002_chrY_T0000137:0;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1457841	1458621	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG002_chrY_T0000137;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000137;transcript_name=HG002_chrY_T0000137;gene_name=AKAP17A;ID=exon:HG002_chrY_T0000137:1;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1457860	1458621	.	+	0	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG002_chrY_T0000137;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000137;transcript_name=HG002_chrY_T0000137;gene_name=AKAP17A;ID=CDS:HG002_chrY_T0000137:0;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1457860	1457862	.	+	0	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG002_chrY_T0000137;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000137;transcript_name=HG002_chrY_T0000137;gene_name=AKAP17A;ID=start_codon:HG002_chrY_T0000137;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1458622	1459773	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG002_chrY_T0000137;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000137;transcript_name=HG002_chrY_T0000137;gene_name=AKAP17A;ID=intron:HG002_chrY_T0000137:1;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1459774	1459922	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG002_chrY_T0000137;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000137;transcript_name=HG002_chrY_T0000137;gene_name=AKAP17A;ID=exon:HG002_chrY_T0000137:2;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1459774	1459922	.	+	0	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG002_chrY_T0000137;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000137;transcript_name=HG002_chrY_T0000137;gene_name=AKAP17A;ID=CDS:HG002_chrY_T0000137:1;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1459923	1463329	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG002_chrY_T0000137;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000137;transcript_name=HG002_chrY_T0000137;gene_name=AKAP17A;ID=intron:HG002_chrY_T0000137:2;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1463330	1464441	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG002_chrY_T0000137;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000137;transcript_name=HG002_chrY_T0000137;gene_name=AKAP17A;ID=exon:HG002_chrY_T0000137:3;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1463330	1463759	.	+	1	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG002_chrY_T0000137;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000137;transcript_name=HG002_chrY_T0000137;gene_name=AKAP17A;ID=CDS:HG002_chrY_T0000137:2;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1463757	1463759	.	+	0	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG002_chrY_T0000137;gene_id=HG002_chrY_G0000035;Parent=HG002_chrY_T0000137;transcript_name=HG002_chrY_T0000137;gene_name=AKAP17A;ID=stop_codon:HG002_chrY_T0000137;Name=AKAP17A;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	1478827	1502886	.	+	.	source_gene_common_name=ASMT;source_gene=ENSG00000292336.1;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;gene_id=HG002_chrY_G0000036;gene_biotype=protein_coding;gene_name=ASMT;gene_sources=liftoff;ID=HG002_chrY_G0000036;Name=ASMT
HG002_chrY	CAT	transcript	1478827	1502886	100	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG002_chrY_T0000138;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_G0000036;transcript_name=HG002_chrY_T0000138;gene_name=ASMT;ID=HG002_chrY_T0000138;Name=ASMT
HG002_chrY	CAT	exon	1478827	1479036	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG002_chrY_T0000138;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000138;transcript_name=HG002_chrY_T0000138;gene_name=ASMT;ID=exon:HG002_chrY_T0000138:0;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1478968	1479036	.	+	0	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG002_chrY_T0000138;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000138;transcript_name=HG002_chrY_T0000138;gene_name=ASMT;ID=CDS:HG002_chrY_T0000138:0;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1478968	1478970	.	+	0	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG002_chrY_T0000138;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000138;transcript_name=HG002_chrY_T0000138;gene_name=ASMT;ID=start_codon:HG002_chrY_T0000138;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1479037	1486906	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG002_chrY_T0000138;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000138;transcript_name=HG002_chrY_T0000138;gene_name=ASMT;ID=intron:HG002_chrY_T0000138:0;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1486907	1487081	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG002_chrY_T0000138;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000138;transcript_name=HG002_chrY_T0000138;gene_name=ASMT;ID=exon:HG002_chrY_T0000138:1;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1486907	1487081	.	+	0	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG002_chrY_T0000138;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000138;transcript_name=HG002_chrY_T0000138;gene_name=ASMT;ID=CDS:HG002_chrY_T0000138:1;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1487082	1488036	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG002_chrY_T0000138;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000138;transcript_name=HG002_chrY_T0000138;gene_name=ASMT;ID=intron:HG002_chrY_T0000138:1;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1488037	1488166	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG002_chrY_T0000138;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000138;transcript_name=HG002_chrY_T0000138;gene_name=ASMT;ID=exon:HG002_chrY_T0000138:2;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1488037	1488166	.	+	2	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG002_chrY_T0000138;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000138;transcript_name=HG002_chrY_T0000138;gene_name=ASMT;ID=CDS:HG002_chrY_T0000138:2;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1488167	1491456	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG002_chrY_T0000138;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000138;transcript_name=HG002_chrY_T0000138;gene_name=ASMT;ID=intron:HG002_chrY_T0000138:2;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1491457	1491525	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG002_chrY_T0000138;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000138;transcript_name=HG002_chrY_T0000138;gene_name=ASMT;ID=exon:HG002_chrY_T0000138:3;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1491457	1491525	.	+	1	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG002_chrY_T0000138;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000138;transcript_name=HG002_chrY_T0000138;gene_name=ASMT;ID=CDS:HG002_chrY_T0000138:3;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1491526	1493575	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG002_chrY_T0000138;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000138;transcript_name=HG002_chrY_T0000138;gene_name=ASMT;ID=intron:HG002_chrY_T0000138:3;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1493576	1493694	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG002_chrY_T0000138;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000138;transcript_name=HG002_chrY_T0000138;gene_name=ASMT;ID=exon:HG002_chrY_T0000138:4;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1493576	1493694	.	+	1	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG002_chrY_T0000138;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000138;transcript_name=HG002_chrY_T0000138;gene_name=ASMT;ID=CDS:HG002_chrY_T0000138:4;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1493695	1496458	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG002_chrY_T0000138;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000138;transcript_name=HG002_chrY_T0000138;gene_name=ASMT;ID=intron:HG002_chrY_T0000138:4;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1496459	1496542	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG002_chrY_T0000138;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000138;transcript_name=HG002_chrY_T0000138;gene_name=ASMT;ID=exon:HG002_chrY_T0000138:5;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1496459	1496542	.	+	2	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG002_chrY_T0000138;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000138;transcript_name=HG002_chrY_T0000138;gene_name=ASMT;ID=CDS:HG002_chrY_T0000138:5;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1496543	1496904	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG002_chrY_T0000138;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000138;transcript_name=HG002_chrY_T0000138;gene_name=ASMT;ID=intron:HG002_chrY_T0000138:5;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1496905	1497045	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG002_chrY_T0000138;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000138;transcript_name=HG002_chrY_T0000138;gene_name=ASMT;ID=exon:HG002_chrY_T0000138:6;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1496905	1497045	.	+	2	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG002_chrY_T0000138;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000138;transcript_name=HG002_chrY_T0000138;gene_name=ASMT;ID=CDS:HG002_chrY_T0000138:6;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1497046	1500193	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG002_chrY_T0000138;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000138;transcript_name=HG002_chrY_T0000138;gene_name=ASMT;ID=intron:HG002_chrY_T0000138:6;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1500194	1500316	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG002_chrY_T0000138;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000138;transcript_name=HG002_chrY_T0000138;gene_name=ASMT;ID=exon:HG002_chrY_T0000138:7;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1500194	1500316	.	+	2	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG002_chrY_T0000138;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000138;transcript_name=HG002_chrY_T0000138;gene_name=ASMT;ID=CDS:HG002_chrY_T0000138:7;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1500317	1502607	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG002_chrY_T0000138;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000138;transcript_name=HG002_chrY_T0000138;gene_name=ASMT;ID=intron:HG002_chrY_T0000138:7;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1502608	1502886	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG002_chrY_T0000138;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000138;transcript_name=HG002_chrY_T0000138;gene_name=ASMT;ID=exon:HG002_chrY_T0000138:8;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1502608	1502819	.	+	2	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG002_chrY_T0000138;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000138;transcript_name=HG002_chrY_T0000138;gene_name=ASMT;ID=CDS:HG002_chrY_T0000138:8;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1502817	1502819	.	+	0	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG002_chrY_T0000138;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000138;transcript_name=HG002_chrY_T0000138;gene_name=ASMT;ID=stop_codon:HG002_chrY_T0000138;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1478932	1502832	100	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG002_chrY_T0000139;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_G0000036;transcript_name=HG002_chrY_T0000139;gene_name=ASMT;ID=HG002_chrY_T0000139;Name=ASMT
HG002_chrY	CAT	exon	1478932	1479036	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG002_chrY_T0000139;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000139;transcript_name=HG002_chrY_T0000139;gene_name=ASMT;ID=exon:HG002_chrY_T0000139:0;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1478968	1479036	.	+	0	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG002_chrY_T0000139;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000139;transcript_name=HG002_chrY_T0000139;gene_name=ASMT;ID=CDS:HG002_chrY_T0000139:0;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1478968	1478970	.	+	0	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG002_chrY_T0000139;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000139;transcript_name=HG002_chrY_T0000139;gene_name=ASMT;ID=start_codon:HG002_chrY_T0000139;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1479037	1486906	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG002_chrY_T0000139;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000139;transcript_name=HG002_chrY_T0000139;gene_name=ASMT;ID=intron:HG002_chrY_T0000139:0;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1486907	1487081	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG002_chrY_T0000139;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000139;transcript_name=HG002_chrY_T0000139;gene_name=ASMT;ID=exon:HG002_chrY_T0000139:1;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1486907	1487081	.	+	0	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG002_chrY_T0000139;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000139;transcript_name=HG002_chrY_T0000139;gene_name=ASMT;ID=CDS:HG002_chrY_T0000139:1;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1487082	1488036	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG002_chrY_T0000139;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000139;transcript_name=HG002_chrY_T0000139;gene_name=ASMT;ID=intron:HG002_chrY_T0000139:1;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1488037	1488166	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG002_chrY_T0000139;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000139;transcript_name=HG002_chrY_T0000139;gene_name=ASMT;ID=exon:HG002_chrY_T0000139:2;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1488037	1488166	.	+	2	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG002_chrY_T0000139;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000139;transcript_name=HG002_chrY_T0000139;gene_name=ASMT;ID=CDS:HG002_chrY_T0000139:2;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1488167	1491456	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG002_chrY_T0000139;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000139;transcript_name=HG002_chrY_T0000139;gene_name=ASMT;ID=intron:HG002_chrY_T0000139:2;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1491457	1491525	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG002_chrY_T0000139;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000139;transcript_name=HG002_chrY_T0000139;gene_name=ASMT;ID=exon:HG002_chrY_T0000139:3;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1491457	1491525	.	+	1	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG002_chrY_T0000139;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000139;transcript_name=HG002_chrY_T0000139;gene_name=ASMT;ID=CDS:HG002_chrY_T0000139:3;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1491526	1493575	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG002_chrY_T0000139;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000139;transcript_name=HG002_chrY_T0000139;gene_name=ASMT;ID=intron:HG002_chrY_T0000139:3;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1493576	1493694	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG002_chrY_T0000139;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000139;transcript_name=HG002_chrY_T0000139;gene_name=ASMT;ID=exon:HG002_chrY_T0000139:4;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1493576	1493694	.	+	1	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG002_chrY_T0000139;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000139;transcript_name=HG002_chrY_T0000139;gene_name=ASMT;ID=CDS:HG002_chrY_T0000139:4;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1493695	1496904	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG002_chrY_T0000139;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000139;transcript_name=HG002_chrY_T0000139;gene_name=ASMT;ID=intron:HG002_chrY_T0000139:4;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1496905	1497045	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG002_chrY_T0000139;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000139;transcript_name=HG002_chrY_T0000139;gene_name=ASMT;ID=exon:HG002_chrY_T0000139:5;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1496905	1497045	.	+	2	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG002_chrY_T0000139;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000139;transcript_name=HG002_chrY_T0000139;gene_name=ASMT;ID=CDS:HG002_chrY_T0000139:5;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1497046	1500193	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG002_chrY_T0000139;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000139;transcript_name=HG002_chrY_T0000139;gene_name=ASMT;ID=intron:HG002_chrY_T0000139:5;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1500194	1500316	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG002_chrY_T0000139;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000139;transcript_name=HG002_chrY_T0000139;gene_name=ASMT;ID=exon:HG002_chrY_T0000139:6;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1500194	1500316	.	+	2	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG002_chrY_T0000139;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000139;transcript_name=HG002_chrY_T0000139;gene_name=ASMT;ID=CDS:HG002_chrY_T0000139:6;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1500317	1502607	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG002_chrY_T0000139;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000139;transcript_name=HG002_chrY_T0000139;gene_name=ASMT;ID=intron:HG002_chrY_T0000139:6;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1502608	1502832	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG002_chrY_T0000139;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000139;transcript_name=HG002_chrY_T0000139;gene_name=ASMT;ID=exon:HG002_chrY_T0000139:7;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1502608	1502819	.	+	2	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG002_chrY_T0000139;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000139;transcript_name=HG002_chrY_T0000139;gene_name=ASMT;ID=CDS:HG002_chrY_T0000139:7;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1502817	1502819	.	+	0	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG002_chrY_T0000139;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000139;transcript_name=HG002_chrY_T0000139;gene_name=ASMT;ID=stop_codon:HG002_chrY_T0000139;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1478943	1502886	100	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG002_chrY_T0000140;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_G0000036;transcript_name=HG002_chrY_T0000140;gene_name=ASMT;ID=HG002_chrY_T0000140;Name=ASMT
HG002_chrY	CAT	exon	1478943	1479036	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG002_chrY_T0000140;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000140;transcript_name=HG002_chrY_T0000140;gene_name=ASMT;ID=exon:HG002_chrY_T0000140:0;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1478968	1479036	.	+	0	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG002_chrY_T0000140;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000140;transcript_name=HG002_chrY_T0000140;gene_name=ASMT;ID=CDS:HG002_chrY_T0000140:0;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1478968	1478970	.	+	0	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG002_chrY_T0000140;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000140;transcript_name=HG002_chrY_T0000140;gene_name=ASMT;ID=start_codon:HG002_chrY_T0000140;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1479037	1486906	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG002_chrY_T0000140;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000140;transcript_name=HG002_chrY_T0000140;gene_name=ASMT;ID=intron:HG002_chrY_T0000140:0;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1486907	1487081	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG002_chrY_T0000140;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000140;transcript_name=HG002_chrY_T0000140;gene_name=ASMT;ID=exon:HG002_chrY_T0000140:1;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1486907	1487081	.	+	0	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG002_chrY_T0000140;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000140;transcript_name=HG002_chrY_T0000140;gene_name=ASMT;ID=CDS:HG002_chrY_T0000140:1;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1487082	1488036	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG002_chrY_T0000140;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000140;transcript_name=HG002_chrY_T0000140;gene_name=ASMT;ID=intron:HG002_chrY_T0000140:1;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1488037	1488166	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG002_chrY_T0000140;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000140;transcript_name=HG002_chrY_T0000140;gene_name=ASMT;ID=exon:HG002_chrY_T0000140:2;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1488037	1488166	.	+	2	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG002_chrY_T0000140;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000140;transcript_name=HG002_chrY_T0000140;gene_name=ASMT;ID=CDS:HG002_chrY_T0000140:2;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1488167	1491456	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG002_chrY_T0000140;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000140;transcript_name=HG002_chrY_T0000140;gene_name=ASMT;ID=intron:HG002_chrY_T0000140:2;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1491457	1491525	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG002_chrY_T0000140;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000140;transcript_name=HG002_chrY_T0000140;gene_name=ASMT;ID=exon:HG002_chrY_T0000140:3;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1491457	1491525	.	+	1	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG002_chrY_T0000140;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000140;transcript_name=HG002_chrY_T0000140;gene_name=ASMT;ID=CDS:HG002_chrY_T0000140:3;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1491526	1493575	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG002_chrY_T0000140;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000140;transcript_name=HG002_chrY_T0000140;gene_name=ASMT;ID=intron:HG002_chrY_T0000140:3;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1493576	1493694	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG002_chrY_T0000140;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000140;transcript_name=HG002_chrY_T0000140;gene_name=ASMT;ID=exon:HG002_chrY_T0000140:4;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1493576	1493694	.	+	1	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG002_chrY_T0000140;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000140;transcript_name=HG002_chrY_T0000140;gene_name=ASMT;ID=CDS:HG002_chrY_T0000140:4;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1493695	1500193	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG002_chrY_T0000140;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000140;transcript_name=HG002_chrY_T0000140;gene_name=ASMT;ID=intron:HG002_chrY_T0000140:4;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1500194	1500316	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG002_chrY_T0000140;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000140;transcript_name=HG002_chrY_T0000140;gene_name=ASMT;ID=exon:HG002_chrY_T0000140:5;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1500194	1500316	.	+	2	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG002_chrY_T0000140;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000140;transcript_name=HG002_chrY_T0000140;gene_name=ASMT;ID=CDS:HG002_chrY_T0000140:5;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1500317	1502607	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG002_chrY_T0000140;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000140;transcript_name=HG002_chrY_T0000140;gene_name=ASMT;ID=intron:HG002_chrY_T0000140:5;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1502608	1502886	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG002_chrY_T0000140;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000140;transcript_name=HG002_chrY_T0000140;gene_name=ASMT;ID=exon:HG002_chrY_T0000140:6;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1502608	1502819	.	+	2	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG002_chrY_T0000140;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000140;transcript_name=HG002_chrY_T0000140;gene_name=ASMT;ID=CDS:HG002_chrY_T0000140:6;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1502817	1502819	.	+	0	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG002_chrY_T0000140;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000140;transcript_name=HG002_chrY_T0000140;gene_name=ASMT;ID=stop_codon:HG002_chrY_T0000140;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1491500	1500219	1000	+	.	source_transcript=ENST00000711207.1;source_transcript_name=ASMT-207;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711207.1;transcript_score=299.608;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711207.1,ENST00000711207.1;transcript_id=HG002_chrY_T0000141;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_G0000036;transcript_name=HG002_chrY_T0000141;gene_name=ASMT;ID=HG002_chrY_T0000141;Name=ASMT
HG002_chrY	CAT	exon	1491500	1491787	.	+	.	source_transcript=ENST00000711207.1;source_transcript_name=ASMT-207;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711207.1;transcript_score=299.608;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711207.1,ENST00000711207.1;transcript_id=HG002_chrY_T0000141;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000141;transcript_name=HG002_chrY_T0000141;gene_name=ASMT;ID=exon:HG002_chrY_T0000141:0;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1491788	1499997	.	+	.	source_transcript=ENST00000711207.1;source_transcript_name=ASMT-207;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711207.1;transcript_score=299.608;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711207.1,ENST00000711207.1;transcript_id=HG002_chrY_T0000141;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000141;transcript_name=HG002_chrY_T0000141;gene_name=ASMT;ID=intron:HG002_chrY_T0000141:0;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1499998	1500219	.	+	.	source_transcript=ENST00000711207.1;source_transcript_name=ASMT-207;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711207.1;transcript_score=299.608;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711207.1,ENST00000711207.1;transcript_id=HG002_chrY_T0000141;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000141;transcript_name=HG002_chrY_T0000141;gene_name=ASMT;ID=exon:HG002_chrY_T0000141:1;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1500154	1502886	100	+	.	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=HG002_chrY_T0000142;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_G0000036;transcript_name=HG002_chrY_T0000142;gene_name=ASMT;ID=HG002_chrY_T0000142;Name=ASMT
HG002_chrY	CAT	exon	1500154	1500316	.	+	.	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=HG002_chrY_T0000142;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000142;transcript_name=HG002_chrY_T0000142;gene_name=ASMT;ID=exon:HG002_chrY_T0000142:0;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1500154	1500316	.	+	0	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=HG002_chrY_T0000142;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000142;transcript_name=HG002_chrY_T0000142;gene_name=ASMT;ID=CDS:HG002_chrY_T0000142:0;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1500317	1502607	.	+	.	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=HG002_chrY_T0000142;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000142;transcript_name=HG002_chrY_T0000142;gene_name=ASMT;ID=intron:HG002_chrY_T0000142:0;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1502608	1502886	.	+	.	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=HG002_chrY_T0000142;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000142;transcript_name=HG002_chrY_T0000142;gene_name=ASMT;ID=exon:HG002_chrY_T0000142:1;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1502608	1502819	.	+	2	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=HG002_chrY_T0000142;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000142;transcript_name=HG002_chrY_T0000142;gene_name=ASMT;ID=CDS:HG002_chrY_T0000142:1;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1502817	1502819	.	+	0	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=HG002_chrY_T0000142;gene_id=HG002_chrY_G0000036;Parent=HG002_chrY_T0000142;transcript_name=HG002_chrY_T0000142;gene_name=ASMT;ID=stop_codon:HG002_chrY_T0000142;Name=ASMT;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	1517739	1623358	.	+	.	source_gene_common_name=LINC02968;source_gene=ENSG00000310540.2;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;gene_id=HG002_chrY_G0000037;gene_biotype=lncRNA;gene_name=LINC02968;gene_sources=liftoff,transMap;ID=HG002_chrY_G0000037;Name=LINC02968
HG002_chrY	CAT	transcript	1517739	1590736	1000	+	.	source_transcript=ENST00000850741.1;source_transcript_name=LINC02968-237;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850741.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;transcript_id=HG002_chrY_T0000143;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_G0000037;transcript_name=HG002_chrY_T0000143;gene_name=LINC02968;ID=HG002_chrY_T0000143;Name=LINC02968
HG002_chrY	CAT	exon	1517739	1517875	.	+	.	source_transcript=ENST00000850741.1;source_transcript_name=LINC02968-237;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850741.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;transcript_id=HG002_chrY_T0000143;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000143;transcript_name=HG002_chrY_T0000143;gene_name=LINC02968;ID=exon:HG002_chrY_T0000143:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1517876	1585752	.	+	.	source_transcript=ENST00000850741.1;source_transcript_name=LINC02968-237;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850741.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;transcript_id=HG002_chrY_T0000143;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000143;transcript_name=HG002_chrY_T0000143;gene_name=LINC02968;ID=intron:HG002_chrY_T0000143:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1585753	1585840	.	+	.	source_transcript=ENST00000850741.1;source_transcript_name=LINC02968-237;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850741.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;transcript_id=HG002_chrY_T0000143;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000143;transcript_name=HG002_chrY_T0000143;gene_name=LINC02968;ID=exon:HG002_chrY_T0000143:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1585841	1590570	.	+	.	source_transcript=ENST00000850741.1;source_transcript_name=LINC02968-237;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850741.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;transcript_id=HG002_chrY_T0000143;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000143;transcript_name=HG002_chrY_T0000143;gene_name=LINC02968;ID=intron:HG002_chrY_T0000143:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1590571	1590736	.	+	.	source_transcript=ENST00000850741.1;source_transcript_name=LINC02968-237;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850741.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;transcript_id=HG002_chrY_T0000143;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000143;transcript_name=HG002_chrY_T0000143;gene_name=LINC02968;ID=exon:HG002_chrY_T0000143:2;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1517744	1611501	1000	+	.	source_transcript=ENST00000850739.1;source_transcript_name=LINC02968-235;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850739.1;transcript_score=299.757;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850739.1,ENST00000850739.1;transcript_id=HG002_chrY_T0000144;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_G0000037;transcript_name=HG002_chrY_T0000144;gene_name=LINC02968;ID=HG002_chrY_T0000144;Name=LINC02968
HG002_chrY	CAT	exon	1517744	1517875	.	+	.	source_transcript=ENST00000850739.1;source_transcript_name=LINC02968-235;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850739.1;transcript_score=299.757;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850739.1,ENST00000850739.1;transcript_id=HG002_chrY_T0000144;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000144;transcript_name=HG002_chrY_T0000144;gene_name=LINC02968;ID=exon:HG002_chrY_T0000144:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1517876	1585752	.	+	.	source_transcript=ENST00000850739.1;source_transcript_name=LINC02968-235;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850739.1;transcript_score=299.757;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850739.1,ENST00000850739.1;transcript_id=HG002_chrY_T0000144;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000144;transcript_name=HG002_chrY_T0000144;gene_name=LINC02968;ID=intron:HG002_chrY_T0000144:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1585753	1585840	.	+	.	source_transcript=ENST00000850739.1;source_transcript_name=LINC02968-235;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850739.1;transcript_score=299.757;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850739.1,ENST00000850739.1;transcript_id=HG002_chrY_T0000144;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000144;transcript_name=HG002_chrY_T0000144;gene_name=LINC02968;ID=exon:HG002_chrY_T0000144:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1585841	1611309	.	+	.	source_transcript=ENST00000850739.1;source_transcript_name=LINC02968-235;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850739.1;transcript_score=299.757;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850739.1,ENST00000850739.1;transcript_id=HG002_chrY_T0000144;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000144;transcript_name=HG002_chrY_T0000144;gene_name=LINC02968;ID=intron:HG002_chrY_T0000144:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1611310	1611501	.	+	.	source_transcript=ENST00000850739.1;source_transcript_name=LINC02968-235;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850739.1;transcript_score=299.757;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850739.1,ENST00000850739.1;transcript_id=HG002_chrY_T0000144;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000144;transcript_name=HG002_chrY_T0000144;gene_name=LINC02968;ID=exon:HG002_chrY_T0000144:2;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1517744	1518442	1000	+	.	source_transcript=ENST00000850749.1;source_transcript_name=LINC02968-245;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850749.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850749.1;transcript_score=199.285;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850749.1,ENST00000850749.1;transcript_id=HG002_chrY_T0000145;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_G0000037;transcript_name=HG002_chrY_T0000145;gene_name=LINC02968;ID=HG002_chrY_T0000145;Name=LINC02968
HG002_chrY	CAT	exon	1517744	1518442	.	+	.	source_transcript=ENST00000850749.1;source_transcript_name=LINC02968-245;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850749.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850749.1;transcript_score=199.285;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850749.1,ENST00000850749.1;transcript_id=HG002_chrY_T0000145;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000145;transcript_name=HG002_chrY_T0000145;gene_name=LINC02968;ID=exon:HG002_chrY_T0000145:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1517746	1520919	1000	+	.	source_transcript=ENST00000850681.1;source_transcript_name=LINC02968-226;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850681.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850681.1;transcript_score=299.43;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850681.1,ENST00000850681.1;transcript_id=HG002_chrY_T0000146;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_G0000037;transcript_name=HG002_chrY_T0000146;gene_name=LINC02968;ID=HG002_chrY_T0000146;Name=LINC02968
HG002_chrY	CAT	exon	1517746	1517875	.	+	.	source_transcript=ENST00000850681.1;source_transcript_name=LINC02968-226;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850681.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850681.1;transcript_score=299.43;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850681.1,ENST00000850681.1;transcript_id=HG002_chrY_T0000146;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000146;transcript_name=HG002_chrY_T0000146;gene_name=LINC02968;ID=exon:HG002_chrY_T0000146:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1517876	1520152	.	+	.	source_transcript=ENST00000850681.1;source_transcript_name=LINC02968-226;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850681.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850681.1;transcript_score=299.43;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850681.1,ENST00000850681.1;transcript_id=HG002_chrY_T0000146;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000146;transcript_name=HG002_chrY_T0000146;gene_name=LINC02968;ID=intron:HG002_chrY_T0000146:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1520153	1520919	.	+	.	source_transcript=ENST00000850681.1;source_transcript_name=LINC02968-226;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850681.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850681.1;transcript_score=299.43;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850681.1,ENST00000850681.1;transcript_id=HG002_chrY_T0000146;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000146;transcript_name=HG002_chrY_T0000146;gene_name=LINC02968;ID=exon:HG002_chrY_T0000146:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1517747	1520916	1000	+	.	source_transcript=ENST00000850680.1;source_transcript_name=LINC02968-225;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850680.1;transcript_score=299.346;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850680.1,ENST00000850680.1;transcript_id=HG002_chrY_T0000147;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_G0000037;transcript_name=HG002_chrY_T0000147;gene_name=LINC02968;ID=HG002_chrY_T0000147;Name=LINC02968
HG002_chrY	CAT	exon	1517747	1517875	.	+	.	source_transcript=ENST00000850680.1;source_transcript_name=LINC02968-225;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850680.1;transcript_score=299.346;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850680.1,ENST00000850680.1;transcript_id=HG002_chrY_T0000147;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000147;transcript_name=HG002_chrY_T0000147;gene_name=LINC02968;ID=exon:HG002_chrY_T0000147:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1517876	1520261	.	+	.	source_transcript=ENST00000850680.1;source_transcript_name=LINC02968-225;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850680.1;transcript_score=299.346;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850680.1,ENST00000850680.1;transcript_id=HG002_chrY_T0000147;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000147;transcript_name=HG002_chrY_T0000147;gene_name=LINC02968;ID=intron:HG002_chrY_T0000147:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1520262	1520916	.	+	.	source_transcript=ENST00000850680.1;source_transcript_name=LINC02968-225;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850680.1;transcript_score=299.346;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850680.1,ENST00000850680.1;transcript_id=HG002_chrY_T0000147;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000147;transcript_name=HG002_chrY_T0000147;gene_name=LINC02968;ID=exon:HG002_chrY_T0000147:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1517749	1615873	1000	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=HG002_chrY_T0000148;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_G0000037;transcript_name=HG002_chrY_T0000148;gene_name=LINC02968;ID=HG002_chrY_T0000148;Name=LINC02968
HG002_chrY	CAT	exon	1517749	1517875	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=HG002_chrY_T0000148;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000148;transcript_name=HG002_chrY_T0000148;gene_name=LINC02968;ID=exon:HG002_chrY_T0000148:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1517876	1585752	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=HG002_chrY_T0000148;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000148;transcript_name=HG002_chrY_T0000148;gene_name=LINC02968;ID=intron:HG002_chrY_T0000148:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1585753	1585840	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=HG002_chrY_T0000148;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000148;transcript_name=HG002_chrY_T0000148;gene_name=LINC02968;ID=exon:HG002_chrY_T0000148:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1585841	1611309	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=HG002_chrY_T0000148;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000148;transcript_name=HG002_chrY_T0000148;gene_name=LINC02968;ID=intron:HG002_chrY_T0000148:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1611310	1611369	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=HG002_chrY_T0000148;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000148;transcript_name=HG002_chrY_T0000148;gene_name=LINC02968;ID=exon:HG002_chrY_T0000148:2;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1611370	1615708	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=HG002_chrY_T0000148;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000148;transcript_name=HG002_chrY_T0000148;gene_name=LINC02968;ID=intron:HG002_chrY_T0000148:2;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1615709	1615873	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=HG002_chrY_T0000148;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000148;transcript_name=HG002_chrY_T0000148;gene_name=LINC02968;ID=exon:HG002_chrY_T0000148:3;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1517750	1522444	1000	+	.	source_transcript=ENST00000850746.1;source_transcript_name=LINC02968-242;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850746.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850746.1,ENST00000850746.1;transcript_id=HG002_chrY_T0000149;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_G0000037;transcript_name=HG002_chrY_T0000149;gene_name=LINC02968;ID=HG002_chrY_T0000149;Name=LINC02968
HG002_chrY	CAT	exon	1517750	1517875	.	+	.	source_transcript=ENST00000850746.1;source_transcript_name=LINC02968-242;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850746.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850746.1,ENST00000850746.1;transcript_id=HG002_chrY_T0000149;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000149;transcript_name=HG002_chrY_T0000149;gene_name=LINC02968;ID=exon:HG002_chrY_T0000149:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1517876	1522298	.	+	.	source_transcript=ENST00000850746.1;source_transcript_name=LINC02968-242;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850746.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850746.1,ENST00000850746.1;transcript_id=HG002_chrY_T0000149;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000149;transcript_name=HG002_chrY_T0000149;gene_name=LINC02968;ID=intron:HG002_chrY_T0000149:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1522299	1522444	.	+	.	source_transcript=ENST00000850746.1;source_transcript_name=LINC02968-242;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850746.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850746.1,ENST00000850746.1;transcript_id=HG002_chrY_T0000149;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000149;transcript_name=HG002_chrY_T0000149;gene_name=LINC02968;ID=exon:HG002_chrY_T0000149:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1517764	1520871	1000	+	.	source_transcript=ENST00000850747.1;source_transcript_name=LINC02968-243;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850747.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850747.1;transcript_score=299.444;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;transcript_id=HG002_chrY_T0000150;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_G0000037;transcript_name=HG002_chrY_T0000150;gene_name=LINC02968;ID=HG002_chrY_T0000150;Name=LINC02968
HG002_chrY	CAT	exon	1517764	1517875	.	+	.	source_transcript=ENST00000850747.1;source_transcript_name=LINC02968-243;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850747.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850747.1;transcript_score=299.444;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;transcript_id=HG002_chrY_T0000150;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000150;transcript_name=HG002_chrY_T0000150;gene_name=LINC02968;ID=exon:HG002_chrY_T0000150:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1517876	1520264	.	+	.	source_transcript=ENST00000850747.1;source_transcript_name=LINC02968-243;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850747.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850747.1;transcript_score=299.444;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;transcript_id=HG002_chrY_T0000150;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000150;transcript_name=HG002_chrY_T0000150;gene_name=LINC02968;ID=intron:HG002_chrY_T0000150:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1520265	1520871	.	+	.	source_transcript=ENST00000850747.1;source_transcript_name=LINC02968-243;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850747.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850747.1;transcript_score=299.444;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;transcript_id=HG002_chrY_T0000150;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000150;transcript_name=HG002_chrY_T0000150;gene_name=LINC02968;ID=exon:HG002_chrY_T0000150:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1517764	1520891	1000	+	.	source_transcript=ENST00000850747.1;source_transcript_name=LINC02968-243;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850747.1;transcript_score=299.444;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850747.1;transcript_id=HG002_chrY_T0000151;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_G0000037;transcript_name=HG002_chrY_T0000151;gene_name=LINC02968;ID=HG002_chrY_T0000151;Name=LINC02968
HG002_chrY	CAT	exon	1517764	1517875	.	+	.	source_transcript=ENST00000850747.1;source_transcript_name=LINC02968-243;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850747.1;transcript_score=299.444;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850747.1;transcript_id=HG002_chrY_T0000151;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000151;transcript_name=HG002_chrY_T0000151;gene_name=LINC02968;ID=exon:HG002_chrY_T0000151:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1517876	1520264	.	+	.	source_transcript=ENST00000850747.1;source_transcript_name=LINC02968-243;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850747.1;transcript_score=299.444;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850747.1;transcript_id=HG002_chrY_T0000151;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000151;transcript_name=HG002_chrY_T0000151;gene_name=LINC02968;ID=intron:HG002_chrY_T0000151:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1520265	1520891	.	+	.	source_transcript=ENST00000850747.1;source_transcript_name=LINC02968-243;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850747.1;transcript_score=299.444;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850747.1;transcript_id=HG002_chrY_T0000151;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000151;transcript_name=HG002_chrY_T0000151;gene_name=LINC02968;ID=exon:HG002_chrY_T0000151:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1517766	1537827	1000	+	.	source_transcript=ENST00000850682.1;source_transcript_name=LINC02968-227;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850682.1;transcript_score=299.758;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850682.1,ENST00000850682.1;transcript_id=HG002_chrY_T0000152;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_G0000037;transcript_name=HG002_chrY_T0000152;gene_name=LINC02968;ID=HG002_chrY_T0000152;Name=LINC02968
HG002_chrY	CAT	exon	1517766	1517875	.	+	.	source_transcript=ENST00000850682.1;source_transcript_name=LINC02968-227;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850682.1;transcript_score=299.758;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850682.1,ENST00000850682.1;transcript_id=HG002_chrY_T0000152;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000152;transcript_name=HG002_chrY_T0000152;gene_name=LINC02968;ID=exon:HG002_chrY_T0000152:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1517876	1522298	.	+	.	source_transcript=ENST00000850682.1;source_transcript_name=LINC02968-227;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850682.1;transcript_score=299.758;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850682.1,ENST00000850682.1;transcript_id=HG002_chrY_T0000152;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000152;transcript_name=HG002_chrY_T0000152;gene_name=LINC02968;ID=intron:HG002_chrY_T0000152:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1522299	1522409	.	+	.	source_transcript=ENST00000850682.1;source_transcript_name=LINC02968-227;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850682.1;transcript_score=299.758;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850682.1,ENST00000850682.1;transcript_id=HG002_chrY_T0000152;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000152;transcript_name=HG002_chrY_T0000152;gene_name=LINC02968;ID=exon:HG002_chrY_T0000152:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1522410	1537634	.	+	.	source_transcript=ENST00000850682.1;source_transcript_name=LINC02968-227;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850682.1;transcript_score=299.758;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850682.1,ENST00000850682.1;transcript_id=HG002_chrY_T0000152;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000152;transcript_name=HG002_chrY_T0000152;gene_name=LINC02968;ID=intron:HG002_chrY_T0000152:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1537635	1537827	.	+	.	source_transcript=ENST00000850682.1;source_transcript_name=LINC02968-227;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850682.1;transcript_score=299.758;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850682.1,ENST00000850682.1;transcript_id=HG002_chrY_T0000152;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000152;transcript_name=HG002_chrY_T0000152;gene_name=LINC02968;ID=exon:HG002_chrY_T0000152:2;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1517766	1522605	1000	+	.	source_transcript=ENST00000850684.1;source_transcript_name=LINC02968-229;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850684.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850684.1;transcript_score=299.595;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850684.1,ENST00000850684.1;transcript_id=HG002_chrY_T0000153;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_G0000037;transcript_name=HG002_chrY_T0000153;gene_name=LINC02968;ID=HG002_chrY_T0000153;Name=LINC02968
HG002_chrY	CAT	exon	1517766	1517875	.	+	.	source_transcript=ENST00000850684.1;source_transcript_name=LINC02968-229;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850684.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850684.1;transcript_score=299.595;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850684.1,ENST00000850684.1;transcript_id=HG002_chrY_T0000153;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000153;transcript_name=HG002_chrY_T0000153;gene_name=LINC02968;ID=exon:HG002_chrY_T0000153:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1517876	1521867	.	+	.	source_transcript=ENST00000850684.1;source_transcript_name=LINC02968-229;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850684.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850684.1;transcript_score=299.595;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850684.1,ENST00000850684.1;transcript_id=HG002_chrY_T0000153;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000153;transcript_name=HG002_chrY_T0000153;gene_name=LINC02968;ID=intron:HG002_chrY_T0000153:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1521868	1522190	.	+	.	source_transcript=ENST00000850684.1;source_transcript_name=LINC02968-229;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850684.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850684.1;transcript_score=299.595;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850684.1,ENST00000850684.1;transcript_id=HG002_chrY_T0000153;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000153;transcript_name=HG002_chrY_T0000153;gene_name=LINC02968;ID=exon:HG002_chrY_T0000153:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1522191	1522298	.	+	.	source_transcript=ENST00000850684.1;source_transcript_name=LINC02968-229;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850684.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850684.1;transcript_score=299.595;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850684.1,ENST00000850684.1;transcript_id=HG002_chrY_T0000153;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000153;transcript_name=HG002_chrY_T0000153;gene_name=LINC02968;ID=intron:HG002_chrY_T0000153:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1522299	1522605	.	+	.	source_transcript=ENST00000850684.1;source_transcript_name=LINC02968-229;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850684.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850684.1;transcript_score=299.595;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850684.1,ENST00000850684.1;transcript_id=HG002_chrY_T0000153;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000153;transcript_name=HG002_chrY_T0000153;gene_name=LINC02968;ID=exon:HG002_chrY_T0000153:2;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1517780	1524624	1000	+	.	source_transcript=ENST00000850683.1;source_transcript_name=LINC02968-228;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850683.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850683.1,ENST00000850683.1;transcript_id=HG002_chrY_T0000154;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_G0000037;transcript_name=HG002_chrY_T0000154;gene_name=LINC02968;ID=HG002_chrY_T0000154;Name=LINC02968
HG002_chrY	CAT	exon	1517780	1517875	.	+	.	source_transcript=ENST00000850683.1;source_transcript_name=LINC02968-228;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850683.1,ENST00000850683.1;transcript_id=HG002_chrY_T0000154;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000154;transcript_name=HG002_chrY_T0000154;gene_name=LINC02968;ID=exon:HG002_chrY_T0000154:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1517876	1522298	.	+	.	source_transcript=ENST00000850683.1;source_transcript_name=LINC02968-228;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850683.1,ENST00000850683.1;transcript_id=HG002_chrY_T0000154;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000154;transcript_name=HG002_chrY_T0000154;gene_name=LINC02968;ID=intron:HG002_chrY_T0000154:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1522299	1522409	.	+	.	source_transcript=ENST00000850683.1;source_transcript_name=LINC02968-228;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850683.1,ENST00000850683.1;transcript_id=HG002_chrY_T0000154;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000154;transcript_name=HG002_chrY_T0000154;gene_name=LINC02968;ID=exon:HG002_chrY_T0000154:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1522410	1524330	.	+	.	source_transcript=ENST00000850683.1;source_transcript_name=LINC02968-228;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850683.1,ENST00000850683.1;transcript_id=HG002_chrY_T0000154;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000154;transcript_name=HG002_chrY_T0000154;gene_name=LINC02968;ID=intron:HG002_chrY_T0000154:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1524331	1524624	.	+	.	source_transcript=ENST00000850683.1;source_transcript_name=LINC02968-228;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850683.1,ENST00000850683.1;transcript_id=HG002_chrY_T0000154;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000154;transcript_name=HG002_chrY_T0000154;gene_name=LINC02968;ID=exon:HG002_chrY_T0000154:2;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1517807	1623358	1000	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=299.877;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=HG002_chrY_T0000155;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_G0000037;transcript_name=HG002_chrY_T0000155;gene_name=LINC02968;ID=HG002_chrY_T0000155;Name=LINC02968
HG002_chrY	CAT	exon	1517807	1517875	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=HG002_chrY_T0000155;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000155;transcript_name=HG002_chrY_T0000155;gene_name=LINC02968;ID=exon:HG002_chrY_T0000155:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1517876	1585752	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=HG002_chrY_T0000155;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000155;transcript_name=HG002_chrY_T0000155;gene_name=LINC02968;ID=intron:HG002_chrY_T0000155:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1585753	1585840	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=HG002_chrY_T0000155;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000155;transcript_name=HG002_chrY_T0000155;gene_name=LINC02968;ID=exon:HG002_chrY_T0000155:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1585841	1615708	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=HG002_chrY_T0000155;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000155;transcript_name=HG002_chrY_T0000155;gene_name=LINC02968;ID=intron:HG002_chrY_T0000155:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1615709	1616010	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=HG002_chrY_T0000155;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000155;transcript_name=HG002_chrY_T0000155;gene_name=LINC02968;ID=exon:HG002_chrY_T0000155:2;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1616011	1623004	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=HG002_chrY_T0000155;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000155;transcript_name=HG002_chrY_T0000155;gene_name=LINC02968;ID=intron:HG002_chrY_T0000155:2;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1623005	1623358	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=HG002_chrY_T0000155;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000155;transcript_name=HG002_chrY_T0000155;gene_name=LINC02968;ID=exon:HG002_chrY_T0000155:3;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1521933	1590737	1000	+	.	source_transcript=ENST00000850686.1;source_transcript_name=LINC02968-231;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850686.1;transcript_score=299.41200000000003;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850686.1,ENST00000850686.1;transcript_id=HG002_chrY_T0000156;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_G0000037;transcript_name=HG002_chrY_T0000156;gene_name=LINC02968;ID=HG002_chrY_T0000156;Name=LINC02968
HG002_chrY	CAT	exon	1521933	1522190	.	+	.	source_transcript=ENST00000850686.1;source_transcript_name=LINC02968-231;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850686.1;transcript_score=299.41200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850686.1,ENST00000850686.1;transcript_id=HG002_chrY_T0000156;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000156;transcript_name=HG002_chrY_T0000156;gene_name=LINC02968;ID=exon:HG002_chrY_T0000156:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1522191	1585752	.	+	.	source_transcript=ENST00000850686.1;source_transcript_name=LINC02968-231;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850686.1;transcript_score=299.41200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850686.1,ENST00000850686.1;transcript_id=HG002_chrY_T0000156;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000156;transcript_name=HG002_chrY_T0000156;gene_name=LINC02968;ID=intron:HG002_chrY_T0000156:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1585753	1585840	.	+	.	source_transcript=ENST00000850686.1;source_transcript_name=LINC02968-231;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850686.1;transcript_score=299.41200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850686.1,ENST00000850686.1;transcript_id=HG002_chrY_T0000156;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000156;transcript_name=HG002_chrY_T0000156;gene_name=LINC02968;ID=exon:HG002_chrY_T0000156:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1585841	1590570	.	+	.	source_transcript=ENST00000850686.1;source_transcript_name=LINC02968-231;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850686.1;transcript_score=299.41200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850686.1,ENST00000850686.1;transcript_id=HG002_chrY_T0000156;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000156;transcript_name=HG002_chrY_T0000156;gene_name=LINC02968;ID=intron:HG002_chrY_T0000156:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1590571	1590737	.	+	.	source_transcript=ENST00000850686.1;source_transcript_name=LINC02968-231;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850686.1;transcript_score=299.41200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850686.1,ENST00000850686.1;transcript_id=HG002_chrY_T0000156;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000156;transcript_name=HG002_chrY_T0000156;gene_name=LINC02968;ID=exon:HG002_chrY_T0000156:2;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1521933	1590735	1000	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=299.55899999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=HG002_chrY_T0000157;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_G0000037;transcript_name=HG002_chrY_T0000157;gene_name=LINC02968;ID=HG002_chrY_T0000157;Name=LINC02968
HG002_chrY	CAT	exon	1521933	1522190	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=299.55899999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=HG002_chrY_T0000157;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000157;transcript_name=HG002_chrY_T0000157;gene_name=LINC02968;ID=exon:HG002_chrY_T0000157:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1522191	1585752	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=299.55899999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=HG002_chrY_T0000157;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000157;transcript_name=HG002_chrY_T0000157;gene_name=LINC02968;ID=intron:HG002_chrY_T0000157:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1585753	1585840	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=299.55899999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=HG002_chrY_T0000157;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000157;transcript_name=HG002_chrY_T0000157;gene_name=LINC02968;ID=exon:HG002_chrY_T0000157:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1585841	1586005	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=299.55899999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=HG002_chrY_T0000157;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000157;transcript_name=HG002_chrY_T0000157;gene_name=LINC02968;ID=intron:HG002_chrY_T0000157:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1586006	1586178	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=299.55899999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=HG002_chrY_T0000157;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000157;transcript_name=HG002_chrY_T0000157;gene_name=LINC02968;ID=exon:HG002_chrY_T0000157:2;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1586179	1590570	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=299.55899999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=HG002_chrY_T0000157;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000157;transcript_name=HG002_chrY_T0000157;gene_name=LINC02968;ID=intron:HG002_chrY_T0000157:2;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1590571	1590735	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=299.55899999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=HG002_chrY_T0000157;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000157;transcript_name=HG002_chrY_T0000157;gene_name=LINC02968;ID=exon:HG002_chrY_T0000157:3;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1521933	1522444	1000	+	.	source_transcript=ENST00000850839.1;source_transcript_name=LINC02968-248;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850839.1;transcript_score=299.257;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850839.1,ENST00000850839.1;transcript_id=HG002_chrY_T0000158;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_G0000037;transcript_name=HG002_chrY_T0000158;gene_name=LINC02968;ID=HG002_chrY_T0000158;Name=LINC02968
HG002_chrY	CAT	exon	1521933	1522190	.	+	.	source_transcript=ENST00000850839.1;source_transcript_name=LINC02968-248;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850839.1;transcript_score=299.257;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850839.1,ENST00000850839.1;transcript_id=HG002_chrY_T0000158;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000158;transcript_name=HG002_chrY_T0000158;gene_name=LINC02968;ID=exon:HG002_chrY_T0000158:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1522191	1522298	.	+	.	source_transcript=ENST00000850839.1;source_transcript_name=LINC02968-248;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850839.1;transcript_score=299.257;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850839.1,ENST00000850839.1;transcript_id=HG002_chrY_T0000158;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000158;transcript_name=HG002_chrY_T0000158;gene_name=LINC02968;ID=intron:HG002_chrY_T0000158:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1522299	1522444	.	+	.	source_transcript=ENST00000850839.1;source_transcript_name=LINC02968-248;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850839.1;transcript_score=299.257;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850839.1,ENST00000850839.1;transcript_id=HG002_chrY_T0000158;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000158;transcript_name=HG002_chrY_T0000158;gene_name=LINC02968;ID=exon:HG002_chrY_T0000158:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1521944	1586219	1000	+	.	source_transcript=ENST00000850744.1;source_transcript_name=LINC02968-240;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850744.1;transcript_score=299.454;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850744.1,ENST00000850744.1;transcript_id=HG002_chrY_T0000159;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_G0000037;transcript_name=HG002_chrY_T0000159;gene_name=LINC02968;ID=HG002_chrY_T0000159;Name=LINC02968
HG002_chrY	CAT	exon	1521944	1522190	.	+	.	source_transcript=ENST00000850744.1;source_transcript_name=LINC02968-240;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850744.1;transcript_score=299.454;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850744.1,ENST00000850744.1;transcript_id=HG002_chrY_T0000159;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000159;transcript_name=HG002_chrY_T0000159;gene_name=LINC02968;ID=exon:HG002_chrY_T0000159:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1522191	1585752	.	+	.	source_transcript=ENST00000850744.1;source_transcript_name=LINC02968-240;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850744.1;transcript_score=299.454;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850744.1,ENST00000850744.1;transcript_id=HG002_chrY_T0000159;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000159;transcript_name=HG002_chrY_T0000159;gene_name=LINC02968;ID=intron:HG002_chrY_T0000159:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1585753	1585840	.	+	.	source_transcript=ENST00000850744.1;source_transcript_name=LINC02968-240;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850744.1;transcript_score=299.454;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850744.1,ENST00000850744.1;transcript_id=HG002_chrY_T0000159;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000159;transcript_name=HG002_chrY_T0000159;gene_name=LINC02968;ID=exon:HG002_chrY_T0000159:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1585841	1586005	.	+	.	source_transcript=ENST00000850744.1;source_transcript_name=LINC02968-240;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850744.1;transcript_score=299.454;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850744.1,ENST00000850744.1;transcript_id=HG002_chrY_T0000159;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000159;transcript_name=HG002_chrY_T0000159;gene_name=LINC02968;ID=intron:HG002_chrY_T0000159:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1586006	1586219	.	+	.	source_transcript=ENST00000850744.1;source_transcript_name=LINC02968-240;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850744.1;transcript_score=299.454;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850744.1,ENST00000850744.1;transcript_id=HG002_chrY_T0000159;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000159;transcript_name=HG002_chrY_T0000159;gene_name=LINC02968;ID=exon:HG002_chrY_T0000159:2;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1521961	1611500	1000	+	.	source_transcript=ENST00000850740.1;source_transcript_name=LINC02968-236;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850740.1;transcript_score=299.214;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850740.1,ENST00000850740.1;transcript_id=HG002_chrY_T0000160;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_G0000037;transcript_name=HG002_chrY_T0000160;gene_name=LINC02968;ID=HG002_chrY_T0000160;Name=LINC02968
HG002_chrY	CAT	exon	1521961	1522190	.	+	.	source_transcript=ENST00000850740.1;source_transcript_name=LINC02968-236;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850740.1;transcript_score=299.214;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850740.1,ENST00000850740.1;transcript_id=HG002_chrY_T0000160;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000160;transcript_name=HG002_chrY_T0000160;gene_name=LINC02968;ID=exon:HG002_chrY_T0000160:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1522191	1585752	.	+	.	source_transcript=ENST00000850740.1;source_transcript_name=LINC02968-236;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850740.1;transcript_score=299.214;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850740.1,ENST00000850740.1;transcript_id=HG002_chrY_T0000160;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000160;transcript_name=HG002_chrY_T0000160;gene_name=LINC02968;ID=intron:HG002_chrY_T0000160:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1585753	1585840	.	+	.	source_transcript=ENST00000850740.1;source_transcript_name=LINC02968-236;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850740.1;transcript_score=299.214;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850740.1,ENST00000850740.1;transcript_id=HG002_chrY_T0000160;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000160;transcript_name=HG002_chrY_T0000160;gene_name=LINC02968;ID=exon:HG002_chrY_T0000160:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1585841	1611309	.	+	.	source_transcript=ENST00000850740.1;source_transcript_name=LINC02968-236;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850740.1;transcript_score=299.214;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850740.1,ENST00000850740.1;transcript_id=HG002_chrY_T0000160;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000160;transcript_name=HG002_chrY_T0000160;gene_name=LINC02968;ID=intron:HG002_chrY_T0000160:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1611310	1611500	.	+	.	source_transcript=ENST00000850740.1;source_transcript_name=LINC02968-236;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850740.1;transcript_score=299.214;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850740.1,ENST00000850740.1;transcript_id=HG002_chrY_T0000160;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000160;transcript_name=HG002_chrY_T0000160;gene_name=LINC02968;ID=exon:HG002_chrY_T0000160:2;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1521984	1615955	1000	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=299.502;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=HG002_chrY_T0000161;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_G0000037;transcript_name=HG002_chrY_T0000161;gene_name=LINC02968;ID=HG002_chrY_T0000161;Name=LINC02968
HG002_chrY	CAT	exon	1521984	1522190	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=299.502;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=HG002_chrY_T0000161;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000161;transcript_name=HG002_chrY_T0000161;gene_name=LINC02968;ID=exon:HG002_chrY_T0000161:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1522191	1585752	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=299.502;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=HG002_chrY_T0000161;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000161;transcript_name=HG002_chrY_T0000161;gene_name=LINC02968;ID=intron:HG002_chrY_T0000161:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1585753	1585840	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=299.502;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=HG002_chrY_T0000161;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000161;transcript_name=HG002_chrY_T0000161;gene_name=LINC02968;ID=exon:HG002_chrY_T0000161:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1585841	1611309	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=299.502;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=HG002_chrY_T0000161;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000161;transcript_name=HG002_chrY_T0000161;gene_name=LINC02968;ID=intron:HG002_chrY_T0000161:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1611310	1611369	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=299.502;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=HG002_chrY_T0000161;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000161;transcript_name=HG002_chrY_T0000161;gene_name=LINC02968;ID=exon:HG002_chrY_T0000161:2;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1611370	1615708	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=299.502;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=HG002_chrY_T0000161;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000161;transcript_name=HG002_chrY_T0000161;gene_name=LINC02968;ID=intron:HG002_chrY_T0000161:2;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1615709	1615955	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=299.502;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=HG002_chrY_T0000161;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000161;transcript_name=HG002_chrY_T0000161;gene_name=LINC02968;ID=exon:HG002_chrY_T0000161:3;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1521984	1590735	1000	+	.	source_transcript=ENST00000850743.1;source_transcript_name=LINC02968-239;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850743.1;transcript_score=299.395;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850743.1,ENST00000850743.1;transcript_id=HG002_chrY_T0000162;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_G0000037;transcript_name=HG002_chrY_T0000162;gene_name=LINC02968;ID=HG002_chrY_T0000162;Name=LINC02968
HG002_chrY	CAT	exon	1521984	1522229	.	+	.	source_transcript=ENST00000850743.1;source_transcript_name=LINC02968-239;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850743.1;transcript_score=299.395;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850743.1,ENST00000850743.1;transcript_id=HG002_chrY_T0000162;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000162;transcript_name=HG002_chrY_T0000162;gene_name=LINC02968;ID=exon:HG002_chrY_T0000162:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1522230	1585752	.	+	.	source_transcript=ENST00000850743.1;source_transcript_name=LINC02968-239;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850743.1;transcript_score=299.395;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850743.1,ENST00000850743.1;transcript_id=HG002_chrY_T0000162;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000162;transcript_name=HG002_chrY_T0000162;gene_name=LINC02968;ID=intron:HG002_chrY_T0000162:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1585753	1585840	.	+	.	source_transcript=ENST00000850743.1;source_transcript_name=LINC02968-239;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850743.1;transcript_score=299.395;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850743.1,ENST00000850743.1;transcript_id=HG002_chrY_T0000162;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000162;transcript_name=HG002_chrY_T0000162;gene_name=LINC02968;ID=exon:HG002_chrY_T0000162:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1585841	1590570	.	+	.	source_transcript=ENST00000850743.1;source_transcript_name=LINC02968-239;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850743.1;transcript_score=299.395;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850743.1,ENST00000850743.1;transcript_id=HG002_chrY_T0000162;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000162;transcript_name=HG002_chrY_T0000162;gene_name=LINC02968;ID=intron:HG002_chrY_T0000162:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1590571	1590735	.	+	.	source_transcript=ENST00000850743.1;source_transcript_name=LINC02968-239;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850743.1;transcript_score=299.395;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850743.1,ENST00000850743.1;transcript_id=HG002_chrY_T0000162;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000162;transcript_name=HG002_chrY_T0000162;gene_name=LINC02968;ID=exon:HG002_chrY_T0000162:2;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1521986	1611499	1000	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=299.13599999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=HG002_chrY_T0000163;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_G0000037;transcript_name=HG002_chrY_T0000163;gene_name=LINC02968;ID=HG002_chrY_T0000163;Name=LINC02968
HG002_chrY	CAT	exon	1521986	1522190	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=299.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=HG002_chrY_T0000163;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000163;transcript_name=HG002_chrY_T0000163;gene_name=LINC02968;ID=exon:HG002_chrY_T0000163:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1522191	1585752	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=299.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=HG002_chrY_T0000163;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000163;transcript_name=HG002_chrY_T0000163;gene_name=LINC02968;ID=intron:HG002_chrY_T0000163:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1585753	1585840	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=299.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=HG002_chrY_T0000163;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000163;transcript_name=HG002_chrY_T0000163;gene_name=LINC02968;ID=exon:HG002_chrY_T0000163:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1585841	1601955	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=299.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=HG002_chrY_T0000163;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000163;transcript_name=HG002_chrY_T0000163;gene_name=LINC02968;ID=intron:HG002_chrY_T0000163:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1601956	1602051	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=299.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=HG002_chrY_T0000163;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000163;transcript_name=HG002_chrY_T0000163;gene_name=LINC02968;ID=exon:HG002_chrY_T0000163:2;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1602052	1611309	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=299.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=HG002_chrY_T0000163;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000163;transcript_name=HG002_chrY_T0000163;gene_name=LINC02968;ID=intron:HG002_chrY_T0000163:2;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1611310	1611499	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=299.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=HG002_chrY_T0000163;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000163;transcript_name=HG002_chrY_T0000163;gene_name=LINC02968;ID=exon:HG002_chrY_T0000163:3;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1592263	1602013	1000	+	.	source_transcript=ENST00000850827.1;source_transcript_name=LINC02968-246;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850827.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850827.1;transcript_score=299.551;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850827.1,ENST00000850827.1;transcript_id=HG002_chrY_T0000164;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_G0000037;transcript_name=HG002_chrY_T0000164;gene_name=LINC02968;ID=HG002_chrY_T0000164;Name=LINC02968
HG002_chrY	CAT	exon	1592263	1592402	.	+	.	source_transcript=ENST00000850827.1;source_transcript_name=LINC02968-246;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850827.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850827.1;transcript_score=299.551;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850827.1,ENST00000850827.1;transcript_id=HG002_chrY_T0000164;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000164;transcript_name=HG002_chrY_T0000164;gene_name=LINC02968;ID=exon:HG002_chrY_T0000164:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1592403	1593629	.	+	.	source_transcript=ENST00000850827.1;source_transcript_name=LINC02968-246;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850827.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850827.1;transcript_score=299.551;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850827.1,ENST00000850827.1;transcript_id=HG002_chrY_T0000164;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000164;transcript_name=HG002_chrY_T0000164;gene_name=LINC02968;ID=intron:HG002_chrY_T0000164:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1593630	1593876	.	+	.	source_transcript=ENST00000850827.1;source_transcript_name=LINC02968-246;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850827.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850827.1;transcript_score=299.551;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850827.1,ENST00000850827.1;transcript_id=HG002_chrY_T0000164;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000164;transcript_name=HG002_chrY_T0000164;gene_name=LINC02968;ID=exon:HG002_chrY_T0000164:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1593877	1601955	.	+	.	source_transcript=ENST00000850827.1;source_transcript_name=LINC02968-246;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850827.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850827.1;transcript_score=299.551;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850827.1,ENST00000850827.1;transcript_id=HG002_chrY_T0000164;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000164;transcript_name=HG002_chrY_T0000164;gene_name=LINC02968;ID=intron:HG002_chrY_T0000164:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1601956	1602013	.	+	.	source_transcript=ENST00000850827.1;source_transcript_name=LINC02968-246;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850827.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850827.1;transcript_score=299.551;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850827.1,ENST00000850827.1;transcript_id=HG002_chrY_T0000164;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000164;transcript_name=HG002_chrY_T0000164;gene_name=LINC02968;ID=exon:HG002_chrY_T0000164:2;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1593797	1623258	1000	+	.	source_transcript=ENST00000850830.1;source_transcript_name=LINC02968-247;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850830.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850830.1;transcript_score=299.843;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850830.1,ENST00000850830.1;transcript_id=HG002_chrY_T0000165;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_G0000037;transcript_name=HG002_chrY_T0000165;gene_name=LINC02968;ID=HG002_chrY_T0000165;Name=LINC02968
HG002_chrY	CAT	exon	1593797	1593876	.	+	.	source_transcript=ENST00000850830.1;source_transcript_name=LINC02968-247;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850830.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850830.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850830.1,ENST00000850830.1;transcript_id=HG002_chrY_T0000165;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000165;transcript_name=HG002_chrY_T0000165;gene_name=LINC02968;ID=exon:HG002_chrY_T0000165:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1593877	1615708	.	+	.	source_transcript=ENST00000850830.1;source_transcript_name=LINC02968-247;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850830.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850830.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850830.1,ENST00000850830.1;transcript_id=HG002_chrY_T0000165;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000165;transcript_name=HG002_chrY_T0000165;gene_name=LINC02968;ID=intron:HG002_chrY_T0000165:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1615709	1616010	.	+	.	source_transcript=ENST00000850830.1;source_transcript_name=LINC02968-247;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850830.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850830.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850830.1,ENST00000850830.1;transcript_id=HG002_chrY_T0000165;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000165;transcript_name=HG002_chrY_T0000165;gene_name=LINC02968;ID=exon:HG002_chrY_T0000165:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1616011	1623004	.	+	.	source_transcript=ENST00000850830.1;source_transcript_name=LINC02968-247;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850830.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850830.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850830.1,ENST00000850830.1;transcript_id=HG002_chrY_T0000165;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000165;transcript_name=HG002_chrY_T0000165;gene_name=LINC02968;ID=intron:HG002_chrY_T0000165:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1623005	1623258	.	+	.	source_transcript=ENST00000850830.1;source_transcript_name=LINC02968-247;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850830.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850830.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850830.1,ENST00000850830.1;transcript_id=HG002_chrY_T0000165;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000165;transcript_name=HG002_chrY_T0000165;gene_name=LINC02968;ID=exon:HG002_chrY_T0000165:2;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1610680	1611847	1000	+	.	source_transcript=ENST00000850748.1;source_transcript_name=LINC02968-244;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850748.1;transcript_score=299.716;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850748.1,ENST00000850748.1;transcript_id=HG002_chrY_T0000166;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_G0000037;transcript_name=HG002_chrY_T0000166;gene_name=LINC02968;ID=HG002_chrY_T0000166;Name=LINC02968
HG002_chrY	CAT	exon	1610680	1610845	.	+	.	source_transcript=ENST00000850748.1;source_transcript_name=LINC02968-244;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850748.1;transcript_score=299.716;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850748.1,ENST00000850748.1;transcript_id=HG002_chrY_T0000166;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000166;transcript_name=HG002_chrY_T0000166;gene_name=LINC02968;ID=exon:HG002_chrY_T0000166:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1610846	1611309	.	+	.	source_transcript=ENST00000850748.1;source_transcript_name=LINC02968-244;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850748.1;transcript_score=299.716;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850748.1,ENST00000850748.1;transcript_id=HG002_chrY_T0000166;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000166;transcript_name=HG002_chrY_T0000166;gene_name=LINC02968;ID=intron:HG002_chrY_T0000166:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1611310	1611847	.	+	.	source_transcript=ENST00000850748.1;source_transcript_name=LINC02968-244;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850748.1;transcript_score=299.716;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850748.1,ENST00000850748.1;transcript_id=HG002_chrY_T0000166;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000166;transcript_name=HG002_chrY_T0000166;gene_name=LINC02968;ID=exon:HG002_chrY_T0000166:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1611127	1615954	1000	+	.	source_transcript=ENST00000850745.1;source_transcript_name=LINC02968-241;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850745.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850745.1,ENST00000850745.1;transcript_id=HG002_chrY_T0000167;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_G0000037;transcript_name=HG002_chrY_T0000167;gene_name=LINC02968;ID=HG002_chrY_T0000167;Name=LINC02968
HG002_chrY	CAT	exon	1611127	1611205	.	+	.	source_transcript=ENST00000850745.1;source_transcript_name=LINC02968-241;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850745.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850745.1,ENST00000850745.1;transcript_id=HG002_chrY_T0000167;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000167;transcript_name=HG002_chrY_T0000167;gene_name=LINC02968;ID=exon:HG002_chrY_T0000167:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1611206	1615708	.	+	.	source_transcript=ENST00000850745.1;source_transcript_name=LINC02968-241;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850745.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850745.1,ENST00000850745.1;transcript_id=HG002_chrY_T0000167;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000167;transcript_name=HG002_chrY_T0000167;gene_name=LINC02968;ID=intron:HG002_chrY_T0000167:0;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1615709	1615954	.	+	.	source_transcript=ENST00000850745.1;source_transcript_name=LINC02968-241;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850745.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850745.1,ENST00000850745.1;transcript_id=HG002_chrY_T0000167;gene_id=HG002_chrY_G0000037;Parent=HG002_chrY_T0000167;transcript_name=HG002_chrY_T0000167;gene_name=LINC02968;ID=exon:HG002_chrY_T0000167:1;Name=LINC02968;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	1626493	1627928	.	+	.	source_gene_common_name=ENSG00000292330;source_gene=ENSG00000292330.1;alternative_source_transcripts=ENST00000711120.1,ENST00000711120.1;gene_id=HG002_chrY_G0000038;gene_biotype=lncRNA;gene_name=ENSG00000292330;gene_sources=liftoff;ID=HG002_chrY_G0000038;Name=ENSG00000292330
HG002_chrY	CAT	transcript	1626493	1627928	1000	+	.	source_transcript=ENST00000711120.1;source_transcript_name=ENST00000711120;source_gene=ENSG00000292330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711120.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711120.1;transcript_score=299.635;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292330;alternative_source_transcripts=ENST00000711120.1,ENST00000711120.1;transcript_id=HG002_chrY_T0000168;gene_id=HG002_chrY_G0000038;Parent=HG002_chrY_G0000038;transcript_name=HG002_chrY_T0000168;gene_name=ENSG00000292330;ID=HG002_chrY_T0000168;Name=ENSG00000292330
HG002_chrY	CAT	exon	1626493	1626698	.	+	.	source_transcript=ENST00000711120.1;source_transcript_name=ENST00000711120;source_gene=ENSG00000292330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711120.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711120.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292330;alternative_source_transcripts=ENST00000711120.1,ENST00000711120.1;transcript_id=HG002_chrY_T0000168;gene_id=HG002_chrY_G0000038;Parent=HG002_chrY_T0000168;transcript_name=HG002_chrY_T0000168;gene_name=ENSG00000292330;ID=exon:HG002_chrY_T0000168:0;Name=ENSG00000292330;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1626699	1627584	.	+	.	source_transcript=ENST00000711120.1;source_transcript_name=ENST00000711120;source_gene=ENSG00000292330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711120.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711120.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292330;alternative_source_transcripts=ENST00000711120.1,ENST00000711120.1;transcript_id=HG002_chrY_T0000168;gene_id=HG002_chrY_G0000038;Parent=HG002_chrY_T0000168;transcript_name=HG002_chrY_T0000168;gene_name=ENSG00000292330;ID=intron:HG002_chrY_T0000168:0;Name=ENSG00000292330;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1627585	1627928	.	+	.	source_transcript=ENST00000711120.1;source_transcript_name=ENST00000711120;source_gene=ENSG00000292330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711120.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711120.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292330;alternative_source_transcripts=ENST00000711120.1,ENST00000711120.1;transcript_id=HG002_chrY_T0000168;gene_id=HG002_chrY_G0000038;Parent=HG002_chrY_T0000168;transcript_name=HG002_chrY_T0000168;gene_name=ENSG00000292330;ID=exon:HG002_chrY_T0000168:1;Name=ENSG00000292330;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	1742699	1753927	.	+	.	source_gene_common_name=ENSG00000310547;source_gene=ENSG00000310547.1;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;gene_id=HG002_chrY_G0000039;gene_biotype=lncRNA;gene_name=ENSG00000310547;gene_sources=liftoff;ID=HG002_chrY_G0000039;Name=ENSG00000310547
HG002_chrY	CAT	transcript	1742699	1753927	1000	+	.	source_transcript=ENST00000850714.1;source_transcript_name=ENST00000850714;source_gene=ENSG00000310547.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310547.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850714.1;transcript_score=298.971;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310547;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;transcript_id=HG002_chrY_T0000169;gene_id=HG002_chrY_G0000039;Parent=HG002_chrY_G0000039;transcript_name=HG002_chrY_T0000169;gene_name=ENSG00000310547;ID=HG002_chrY_T0000169;Name=ENSG00000310547
HG002_chrY	CAT	exon	1742699	1742889	.	+	.	source_transcript=ENST00000850714.1;source_transcript_name=ENST00000850714;source_gene=ENSG00000310547.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310547.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850714.1;transcript_score=298.971;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310547;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;transcript_id=HG002_chrY_T0000169;gene_id=HG002_chrY_G0000039;Parent=HG002_chrY_T0000169;transcript_name=HG002_chrY_T0000169;gene_name=ENSG00000310547;ID=exon:HG002_chrY_T0000169:0;Name=ENSG00000310547;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1742890	1752682	.	+	.	source_transcript=ENST00000850714.1;source_transcript_name=ENST00000850714;source_gene=ENSG00000310547.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310547.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850714.1;transcript_score=298.971;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310547;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;transcript_id=HG002_chrY_T0000169;gene_id=HG002_chrY_G0000039;Parent=HG002_chrY_T0000169;transcript_name=HG002_chrY_T0000169;gene_name=ENSG00000310547;ID=intron:HG002_chrY_T0000169:0;Name=ENSG00000310547;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1752683	1752792	.	+	.	source_transcript=ENST00000850714.1;source_transcript_name=ENST00000850714;source_gene=ENSG00000310547.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310547.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850714.1;transcript_score=298.971;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310547;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;transcript_id=HG002_chrY_T0000169;gene_id=HG002_chrY_G0000039;Parent=HG002_chrY_T0000169;transcript_name=HG002_chrY_T0000169;gene_name=ENSG00000310547;ID=exon:HG002_chrY_T0000169:1;Name=ENSG00000310547;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1752793	1753242	.	+	.	source_transcript=ENST00000850714.1;source_transcript_name=ENST00000850714;source_gene=ENSG00000310547.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310547.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850714.1;transcript_score=298.971;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310547;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;transcript_id=HG002_chrY_T0000169;gene_id=HG002_chrY_G0000039;Parent=HG002_chrY_T0000169;transcript_name=HG002_chrY_T0000169;gene_name=ENSG00000310547;ID=intron:HG002_chrY_T0000169:1;Name=ENSG00000310547;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1753243	1753927	.	+	.	source_transcript=ENST00000850714.1;source_transcript_name=ENST00000850714;source_gene=ENSG00000310547.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310547.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850714.1;transcript_score=298.971;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310547;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;transcript_id=HG002_chrY_T0000169;gene_id=HG002_chrY_G0000039;Parent=HG002_chrY_T0000169;transcript_name=HG002_chrY_T0000169;gene_name=ENSG00000310547;ID=exon:HG002_chrY_T0000169:2;Name=ENSG00000310547;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	1894133	2179451	.	-	.	source_gene_common_name=DHRSX;source_gene=ENSG00000292338.1;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;gene_id=HG002_chrY_G0000040;gene_biotype=protein_coding;gene_name=DHRSX;gene_sources=liftoff;ID=HG002_chrY_G0000040;Name=DHRSX
HG002_chrY	CAT	transcript	1894133	2177622	100	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG002_chrY_T0000170;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_G0000040;transcript_name=HG002_chrY_T0000170;gene_name=DHRSX;ID=HG002_chrY_T0000170;Name=DHRSX
HG002_chrY	CAT	exon	1894133	1895856	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG002_chrY_T0000170;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000170;transcript_name=HG002_chrY_T0000170;gene_name=DHRSX;ID=exon:HG002_chrY_T0000170:0;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1895668	1895856	.	-	0	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG002_chrY_T0000170;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000170;transcript_name=HG002_chrY_T0000170;gene_name=DHRSX;ID=CDS:HG002_chrY_T0000170:0;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	1895668	1895670	.	-	0	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG002_chrY_T0000170;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000170;transcript_name=HG002_chrY_T0000170;gene_name=DHRSX;ID=stop_codon:HG002_chrY_T0000170;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1895857	1918406	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG002_chrY_T0000170;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000170;transcript_name=HG002_chrY_T0000170;gene_name=DHRSX;ID=intron:HG002_chrY_T0000170:0;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1918407	1918614	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG002_chrY_T0000170;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000170;transcript_name=HG002_chrY_T0000170;gene_name=DHRSX;ID=exon:HG002_chrY_T0000170:1;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1918407	1918614	.	-	1	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG002_chrY_T0000170;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000170;transcript_name=HG002_chrY_T0000170;gene_name=DHRSX;ID=CDS:HG002_chrY_T0000170:1;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1918615	1942138	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG002_chrY_T0000170;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000170;transcript_name=HG002_chrY_T0000170;gene_name=DHRSX;ID=intron:HG002_chrY_T0000170:1;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1942139	1942346	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG002_chrY_T0000170;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000170;transcript_name=HG002_chrY_T0000170;gene_name=DHRSX;ID=exon:HG002_chrY_T0000170:2;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1942139	1942346	.	-	2	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG002_chrY_T0000170;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000170;transcript_name=HG002_chrY_T0000170;gene_name=DHRSX;ID=CDS:HG002_chrY_T0000170:2;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1942347	1962788	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG002_chrY_T0000170;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000170;transcript_name=HG002_chrY_T0000170;gene_name=DHRSX;ID=intron:HG002_chrY_T0000170:2;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1962789	1962890	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG002_chrY_T0000170;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000170;transcript_name=HG002_chrY_T0000170;gene_name=DHRSX;ID=exon:HG002_chrY_T0000170:3;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1962789	1962890	.	-	2	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG002_chrY_T0000170;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000170;transcript_name=HG002_chrY_T0000170;gene_name=DHRSX;ID=CDS:HG002_chrY_T0000170:3;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1962891	2085362	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG002_chrY_T0000170;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000170;transcript_name=HG002_chrY_T0000170;gene_name=DHRSX;ID=intron:HG002_chrY_T0000170:3;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2085363	2085431	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG002_chrY_T0000170;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000170;transcript_name=HG002_chrY_T0000170;gene_name=DHRSX;ID=exon:HG002_chrY_T0000170:4;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2085363	2085431	.	-	2	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG002_chrY_T0000170;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000170;transcript_name=HG002_chrY_T0000170;gene_name=DHRSX;ID=CDS:HG002_chrY_T0000170:4;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2085432	2101815	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG002_chrY_T0000170;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000170;transcript_name=HG002_chrY_T0000170;gene_name=DHRSX;ID=intron:HG002_chrY_T0000170:4;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2101816	2101923	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG002_chrY_T0000170;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000170;transcript_name=HG002_chrY_T0000170;gene_name=DHRSX;ID=exon:HG002_chrY_T0000170:5;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2101816	2101923	.	-	2	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG002_chrY_T0000170;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000170;transcript_name=HG002_chrY_T0000170;gene_name=DHRSX;ID=CDS:HG002_chrY_T0000170:5;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2101924	2177462	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG002_chrY_T0000170;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000170;transcript_name=HG002_chrY_T0000170;gene_name=DHRSX;ID=intron:HG002_chrY_T0000170:5;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2177463	2177622	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG002_chrY_T0000170;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000170;transcript_name=HG002_chrY_T0000170;gene_name=DHRSX;ID=exon:HG002_chrY_T0000170:6;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2177463	2177571	.	-	0	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG002_chrY_T0000170;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000170;transcript_name=HG002_chrY_T0000170;gene_name=DHRSX;ID=CDS:HG002_chrY_T0000170:6;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	2177569	2177571	.	-	0	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG002_chrY_T0000170;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000170;transcript_name=HG002_chrY_T0000170;gene_name=DHRSX;ID=start_codon:HG002_chrY_T0000170;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1918446	2177619	100	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG002_chrY_T0000171;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_G0000040;transcript_name=HG002_chrY_T0000171;gene_name=DHRSX;ID=HG002_chrY_T0000171;Name=DHRSX
HG002_chrY	CAT	exon	1918446	1918614	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG002_chrY_T0000171;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000171;transcript_name=HG002_chrY_T0000171;gene_name=DHRSX;ID=exon:HG002_chrY_T0000171:0;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1918446	1918614	.	-	1	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG002_chrY_T0000171;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000171;transcript_name=HG002_chrY_T0000171;gene_name=DHRSX;ID=CDS:HG002_chrY_T0000171:0;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1918615	1942138	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG002_chrY_T0000171;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000171;transcript_name=HG002_chrY_T0000171;gene_name=DHRSX;ID=intron:HG002_chrY_T0000171:0;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1942139	1942346	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG002_chrY_T0000171;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000171;transcript_name=HG002_chrY_T0000171;gene_name=DHRSX;ID=exon:HG002_chrY_T0000171:1;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1942139	1942346	.	-	2	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG002_chrY_T0000171;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000171;transcript_name=HG002_chrY_T0000171;gene_name=DHRSX;ID=CDS:HG002_chrY_T0000171:1;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1942347	1962788	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG002_chrY_T0000171;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000171;transcript_name=HG002_chrY_T0000171;gene_name=DHRSX;ID=intron:HG002_chrY_T0000171:1;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1962789	1962890	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG002_chrY_T0000171;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000171;transcript_name=HG002_chrY_T0000171;gene_name=DHRSX;ID=exon:HG002_chrY_T0000171:2;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1962789	1962890	.	-	2	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG002_chrY_T0000171;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000171;transcript_name=HG002_chrY_T0000171;gene_name=DHRSX;ID=CDS:HG002_chrY_T0000171:2;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1962891	2101815	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG002_chrY_T0000171;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000171;transcript_name=HG002_chrY_T0000171;gene_name=DHRSX;ID=intron:HG002_chrY_T0000171:2;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2101816	2101923	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG002_chrY_T0000171;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000171;transcript_name=HG002_chrY_T0000171;gene_name=DHRSX;ID=exon:HG002_chrY_T0000171:3;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2101816	2101923	.	-	2	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG002_chrY_T0000171;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000171;transcript_name=HG002_chrY_T0000171;gene_name=DHRSX;ID=CDS:HG002_chrY_T0000171:3;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2101924	2177462	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG002_chrY_T0000171;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000171;transcript_name=HG002_chrY_T0000171;gene_name=DHRSX;ID=intron:HG002_chrY_T0000171:3;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2177463	2177619	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG002_chrY_T0000171;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000171;transcript_name=HG002_chrY_T0000171;gene_name=DHRSX;ID=exon:HG002_chrY_T0000171:4;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2177463	2177571	.	-	0	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG002_chrY_T0000171;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000171;transcript_name=HG002_chrY_T0000171;gene_name=DHRSX;ID=CDS:HG002_chrY_T0000171:4;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	2177569	2177571	.	-	0	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG002_chrY_T0000171;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000171;transcript_name=HG002_chrY_T0000171;gene_name=DHRSX;ID=start_codon:HG002_chrY_T0000171;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1936716	1942336	1000	-	.	source_transcript=ENST00000711202.1;source_transcript_name=DHRSX-212;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711202.1;transcript_score=299.476;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711202.1,ENST00000711202.1;transcript_id=HG002_chrY_T0000172;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_G0000040;transcript_name=HG002_chrY_T0000172;gene_name=DHRSX;ID=HG002_chrY_T0000172;Name=DHRSX
HG002_chrY	CAT	exon	1936716	1937089	.	-	.	source_transcript=ENST00000711202.1;source_transcript_name=DHRSX-212;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711202.1;transcript_score=299.476;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711202.1,ENST00000711202.1;transcript_id=HG002_chrY_T0000172;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000172;transcript_name=HG002_chrY_T0000172;gene_name=DHRSX;ID=exon:HG002_chrY_T0000172:0;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1937090	1942138	.	-	.	source_transcript=ENST00000711202.1;source_transcript_name=DHRSX-212;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711202.1;transcript_score=299.476;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711202.1,ENST00000711202.1;transcript_id=HG002_chrY_T0000172;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000172;transcript_name=HG002_chrY_T0000172;gene_name=DHRSX;ID=intron:HG002_chrY_T0000172:0;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1942139	1942336	.	-	.	source_transcript=ENST00000711202.1;source_transcript_name=DHRSX-212;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711202.1;transcript_score=299.476;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711202.1,ENST00000711202.1;transcript_id=HG002_chrY_T0000172;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000172;transcript_name=HG002_chrY_T0000172;gene_name=DHRSX;ID=exon:HG002_chrY_T0000172:1;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1942169	2177297	100	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG002_chrY_T0000173;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_G0000040;transcript_name=HG002_chrY_T0000173;gene_name=DHRSX;ID=HG002_chrY_T0000173;Name=DHRSX
HG002_chrY	CAT	exon	1942169	1942346	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG002_chrY_T0000173;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000173;transcript_name=HG002_chrY_T0000173;gene_name=DHRSX;ID=exon:HG002_chrY_T0000173:0;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1942169	1942346	.	-	2	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG002_chrY_T0000173;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000173;transcript_name=HG002_chrY_T0000173;gene_name=DHRSX;ID=CDS:HG002_chrY_T0000173:0;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1942347	1962788	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG002_chrY_T0000173;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000173;transcript_name=HG002_chrY_T0000173;gene_name=DHRSX;ID=intron:HG002_chrY_T0000173:0;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1962789	1962890	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG002_chrY_T0000173;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000173;transcript_name=HG002_chrY_T0000173;gene_name=DHRSX;ID=exon:HG002_chrY_T0000173:1;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1962789	1962890	.	-	2	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG002_chrY_T0000173;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000173;transcript_name=HG002_chrY_T0000173;gene_name=DHRSX;ID=CDS:HG002_chrY_T0000173:1;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1962891	2085362	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG002_chrY_T0000173;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000173;transcript_name=HG002_chrY_T0000173;gene_name=DHRSX;ID=intron:HG002_chrY_T0000173:1;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2085363	2085431	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG002_chrY_T0000173;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000173;transcript_name=HG002_chrY_T0000173;gene_name=DHRSX;ID=exon:HG002_chrY_T0000173:2;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2085363	2085431	.	-	2	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG002_chrY_T0000173;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000173;transcript_name=HG002_chrY_T0000173;gene_name=DHRSX;ID=CDS:HG002_chrY_T0000173:2;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2085432	2101815	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG002_chrY_T0000173;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000173;transcript_name=HG002_chrY_T0000173;gene_name=DHRSX;ID=intron:HG002_chrY_T0000173:2;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2101816	2101923	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG002_chrY_T0000173;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000173;transcript_name=HG002_chrY_T0000173;gene_name=DHRSX;ID=exon:HG002_chrY_T0000173:3;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2101816	2101831	.	-	0	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG002_chrY_T0000173;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000173;transcript_name=HG002_chrY_T0000173;gene_name=DHRSX;ID=CDS:HG002_chrY_T0000173:3;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	2101829	2101831	.	-	0	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG002_chrY_T0000173;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000173;transcript_name=HG002_chrY_T0000173;gene_name=DHRSX;ID=start_codon:HG002_chrY_T0000173;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2101924	2176956	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG002_chrY_T0000173;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000173;transcript_name=HG002_chrY_T0000173;gene_name=DHRSX;ID=intron:HG002_chrY_T0000173:3;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2176957	2177297	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG002_chrY_T0000173;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000173;transcript_name=HG002_chrY_T0000173;gene_name=DHRSX;ID=exon:HG002_chrY_T0000173:4;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1942253	2179451	1000	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG002_chrY_T0000174;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_G0000040;transcript_name=HG002_chrY_T0000174;gene_name=DHRSX;ID=HG002_chrY_T0000174;Name=DHRSX
HG002_chrY	CAT	exon	1942253	1942346	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG002_chrY_T0000174;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000174;transcript_name=HG002_chrY_T0000174;gene_name=DHRSX;ID=exon:HG002_chrY_T0000174:0;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1942347	1962788	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG002_chrY_T0000174;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000174;transcript_name=HG002_chrY_T0000174;gene_name=DHRSX;ID=intron:HG002_chrY_T0000174:0;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	1962789	1962890	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG002_chrY_T0000174;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000174;transcript_name=HG002_chrY_T0000174;gene_name=DHRSX;ID=exon:HG002_chrY_T0000174:1;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1962891	2068911	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG002_chrY_T0000174;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000174;transcript_name=HG002_chrY_T0000174;gene_name=DHRSX;ID=intron:HG002_chrY_T0000174:1;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2068912	2069032	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG002_chrY_T0000174;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000174;transcript_name=HG002_chrY_T0000174;gene_name=DHRSX;ID=exon:HG002_chrY_T0000174:2;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2069033	2085362	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG002_chrY_T0000174;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000174;transcript_name=HG002_chrY_T0000174;gene_name=DHRSX;ID=intron:HG002_chrY_T0000174:2;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2085363	2085431	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG002_chrY_T0000174;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000174;transcript_name=HG002_chrY_T0000174;gene_name=DHRSX;ID=exon:HG002_chrY_T0000174:3;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2085432	2101815	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG002_chrY_T0000174;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000174;transcript_name=HG002_chrY_T0000174;gene_name=DHRSX;ID=intron:HG002_chrY_T0000174:3;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2101816	2101923	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG002_chrY_T0000174;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000174;transcript_name=HG002_chrY_T0000174;gene_name=DHRSX;ID=exon:HG002_chrY_T0000174:4;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2101924	2179406	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG002_chrY_T0000174;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000174;transcript_name=HG002_chrY_T0000174;gene_name=DHRSX;ID=intron:HG002_chrY_T0000174:4;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2179407	2179451	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG002_chrY_T0000174;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000174;transcript_name=HG002_chrY_T0000174;gene_name=DHRSX;ID=exon:HG002_chrY_T0000174:5;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	1962789	2177235	100	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG002_chrY_T0000175;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_G0000040;transcript_name=HG002_chrY_T0000175;gene_name=DHRSX;ID=HG002_chrY_T0000175;Name=DHRSX
HG002_chrY	CAT	exon	1962789	1962890	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG002_chrY_T0000175;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000175;transcript_name=HG002_chrY_T0000175;gene_name=DHRSX;ID=exon:HG002_chrY_T0000175:0;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	1962789	1962861	.	-	0	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG002_chrY_T0000175;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000175;transcript_name=HG002_chrY_T0000175;gene_name=DHRSX;ID=CDS:HG002_chrY_T0000175:0;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	1962859	1962861	.	-	0	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG002_chrY_T0000175;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000175;transcript_name=HG002_chrY_T0000175;gene_name=DHRSX;ID=start_codon:HG002_chrY_T0000175;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	1962891	2068911	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG002_chrY_T0000175;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000175;transcript_name=HG002_chrY_T0000175;gene_name=DHRSX;ID=intron:HG002_chrY_T0000175:0;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2068912	2069032	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG002_chrY_T0000175;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000175;transcript_name=HG002_chrY_T0000175;gene_name=DHRSX;ID=exon:HG002_chrY_T0000175:1;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2069033	2085362	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG002_chrY_T0000175;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000175;transcript_name=HG002_chrY_T0000175;gene_name=DHRSX;ID=intron:HG002_chrY_T0000175:1;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2085363	2085431	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG002_chrY_T0000175;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000175;transcript_name=HG002_chrY_T0000175;gene_name=DHRSX;ID=exon:HG002_chrY_T0000175:2;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2085432	2101815	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG002_chrY_T0000175;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000175;transcript_name=HG002_chrY_T0000175;gene_name=DHRSX;ID=intron:HG002_chrY_T0000175:2;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2101816	2101923	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG002_chrY_T0000175;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000175;transcript_name=HG002_chrY_T0000175;gene_name=DHRSX;ID=exon:HG002_chrY_T0000175:3;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2101924	2176956	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG002_chrY_T0000175;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000175;transcript_name=HG002_chrY_T0000175;gene_name=DHRSX;ID=intron:HG002_chrY_T0000175:3;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2176957	2177235	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG002_chrY_T0000175;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000175;transcript_name=HG002_chrY_T0000175;gene_name=DHRSX;ID=exon:HG002_chrY_T0000175:4;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2014390	2177606	1000	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=HG002_chrY_T0000177;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_G0000040;transcript_name=HG002_chrY_T0000177;gene_name=DHRSX;ID=HG002_chrY_T0000177;Name=DHRSX
HG002_chrY	CAT	exon	2014390	2014558	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=HG002_chrY_T0000177;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000177;transcript_name=HG002_chrY_T0000177;gene_name=DHRSX;ID=exon:HG002_chrY_T0000177:0;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2014559	2085362	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=HG002_chrY_T0000177;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000177;transcript_name=HG002_chrY_T0000177;gene_name=DHRSX;ID=intron:HG002_chrY_T0000177:0;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2085363	2085431	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=HG002_chrY_T0000177;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000177;transcript_name=HG002_chrY_T0000177;gene_name=DHRSX;ID=exon:HG002_chrY_T0000177:1;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2085432	2101815	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=HG002_chrY_T0000177;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000177;transcript_name=HG002_chrY_T0000177;gene_name=DHRSX;ID=intron:HG002_chrY_T0000177:1;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2101816	2101923	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=HG002_chrY_T0000177;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000177;transcript_name=HG002_chrY_T0000177;gene_name=DHRSX;ID=exon:HG002_chrY_T0000177:2;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2101924	2177462	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=HG002_chrY_T0000177;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000177;transcript_name=HG002_chrY_T0000177;gene_name=DHRSX;ID=intron:HG002_chrY_T0000177:2;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2177463	2177606	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=HG002_chrY_T0000177;gene_id=HG002_chrY_G0000040;Parent=HG002_chrY_T0000177;transcript_name=HG002_chrY_T0000177;gene_name=DHRSX;ID=exon:HG002_chrY_T0000177:3;Name=DHRSX;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	2010857	2012973	.	-	.	source_gene_common_name=DHRSX-IT1;source_gene=ENSG00000292337.1;alternative_source_transcripts=ENST00000711205.1,ENST00000711205.1;gene_id=HG002_chrY_G0000041;gene_biotype=lncRNA;gene_name=DHRSX-IT1;gene_sources=liftoff;ID=HG002_chrY_G0000041;Name=DHRSX-IT1
HG002_chrY	CAT	transcript	2010857	2012973	1000	-	.	source_transcript=ENST00000711205.1;source_transcript_name=DHRSX-IT1-202;source_gene=ENSG00000292337.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292337.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711205.1;transcript_score=299.693;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX-IT1;alternative_source_transcripts=ENST00000711205.1,ENST00000711205.1;transcript_id=HG002_chrY_T0000176;gene_id=HG002_chrY_G0000041;Parent=HG002_chrY_G0000041;transcript_name=HG002_chrY_T0000176;gene_name=DHRSX-IT1;ID=HG002_chrY_T0000176;Name=DHRSX-IT1
HG002_chrY	CAT	exon	2010857	2011481	.	-	.	source_transcript=ENST00000711205.1;source_transcript_name=DHRSX-IT1-202;source_gene=ENSG00000292337.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292337.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711205.1;transcript_score=299.693;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX-IT1;alternative_source_transcripts=ENST00000711205.1,ENST00000711205.1;transcript_id=HG002_chrY_T0000176;gene_id=HG002_chrY_G0000041;Parent=HG002_chrY_T0000176;transcript_name=HG002_chrY_T0000176;gene_name=DHRSX-IT1;ID=exon:HG002_chrY_T0000176:0;Name=DHRSX-IT1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2011482	2012947	.	-	.	source_transcript=ENST00000711205.1;source_transcript_name=DHRSX-IT1-202;source_gene=ENSG00000292337.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292337.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711205.1;transcript_score=299.693;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX-IT1;alternative_source_transcripts=ENST00000711205.1,ENST00000711205.1;transcript_id=HG002_chrY_T0000176;gene_id=HG002_chrY_G0000041;Parent=HG002_chrY_T0000176;transcript_name=HG002_chrY_T0000176;gene_name=DHRSX-IT1;ID=intron:HG002_chrY_T0000176:0;Name=DHRSX-IT1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2012948	2012973	.	-	.	source_transcript=ENST00000711205.1;source_transcript_name=DHRSX-IT1-202;source_gene=ENSG00000292337.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292337.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711205.1;transcript_score=299.693;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX-IT1;alternative_source_transcripts=ENST00000711205.1,ENST00000711205.1;transcript_id=HG002_chrY_T0000176;gene_id=HG002_chrY_G0000041;Parent=HG002_chrY_T0000176;transcript_name=HG002_chrY_T0000176;gene_name=DHRSX-IT1;ID=exon:HG002_chrY_T0000176:1;Name=DHRSX-IT1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	2049573	2049684	.	-	.	source_gene_common_name=ENSG00000310552;source_gene=ENSG00000310552.1;alternative_source_transcripts=ENST00000850728.1,ENST00000850728.1;gene_id=HG002_chrY_G0000042;gene_biotype=lncRNA;gene_name=ENSG00000310552;gene_sources=liftoff;ID=HG002_chrY_G0000042;Name=ENSG00000310552
HG002_chrY	CAT	transcript	2049573	2049684	1000	-	.	source_transcript=ENST00000850728.1;source_transcript_name=ENST00000850728;source_gene=ENSG00000310552.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310552.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850728.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310552;alternative_source_transcripts=ENST00000850728.1,ENST00000850728.1;transcript_id=HG002_chrY_T0000178;gene_id=HG002_chrY_G0000042;Parent=HG002_chrY_G0000042;transcript_name=HG002_chrY_T0000178;gene_name=ENSG00000310552;ID=HG002_chrY_T0000178;Name=ENSG00000310552
HG002_chrY	CAT	exon	2049573	2049684	.	-	.	source_transcript=ENST00000850728.1;source_transcript_name=ENST00000850728;source_gene=ENSG00000310552.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310552.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850728.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310552;alternative_source_transcripts=ENST00000850728.1,ENST00000850728.1;transcript_id=HG002_chrY_T0000178;gene_id=HG002_chrY_G0000042;Parent=HG002_chrY_T0000178;transcript_name=HG002_chrY_T0000178;gene_name=ENSG00000310552;ID=exon:HG002_chrY_T0000178:0;Name=ENSG00000310552;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	2163057	2177622	.	-	.	source_gene_common_name=ZBED1;source_gene=ENSG00000292345.1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;gene_id=HG002_chrY_G0000043;gene_biotype=protein_coding;gene_name=ZBED1;gene_sources=liftoff;ID=HG002_chrY_G0000043;Name=ZBED1
HG002_chrY	CAT	transcript	2163057	2177613	100	-	.	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=HG002_chrY_T0000179;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_G0000043;transcript_name=HG002_chrY_T0000179;gene_name=ZBED1;ID=HG002_chrY_T0000179;Name=ZBED1
HG002_chrY	CAT	exon	2163057	2167415	.	-	.	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=HG002_chrY_T0000179;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_T0000179;transcript_name=HG002_chrY_T0000179;gene_name=ZBED1;ID=exon:HG002_chrY_T0000179:0;Name=ZBED1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2165278	2167362	.	-	0	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=HG002_chrY_T0000179;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_T0000179;transcript_name=HG002_chrY_T0000179;gene_name=ZBED1;ID=CDS:HG002_chrY_T0000179:0;Name=ZBED1;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	2165278	2165280	.	-	0	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=HG002_chrY_T0000179;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_T0000179;transcript_name=HG002_chrY_T0000179;gene_name=ZBED1;ID=stop_codon:HG002_chrY_T0000179;Name=ZBED1;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	2167360	2167362	.	-	0	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=HG002_chrY_T0000179;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_T0000179;transcript_name=HG002_chrY_T0000179;gene_name=ZBED1;ID=start_codon:HG002_chrY_T0000179;Name=ZBED1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2167416	2177462	.	-	.	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=HG002_chrY_T0000179;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_T0000179;transcript_name=HG002_chrY_T0000179;gene_name=ZBED1;ID=intron:HG002_chrY_T0000179:0;Name=ZBED1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2177463	2177613	.	-	.	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=HG002_chrY_T0000179;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_T0000179;transcript_name=HG002_chrY_T0000179;gene_name=ZBED1;ID=exon:HG002_chrY_T0000179:1;Name=ZBED1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2163057	2177613	100	-	.	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=HG002_chrY_T0000180;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_G0000043;transcript_name=HG002_chrY_T0000180;gene_name=ZBED1;ID=HG002_chrY_T0000180;Name=ZBED1
HG002_chrY	CAT	exon	2163057	2167412	.	-	.	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=HG002_chrY_T0000180;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_T0000180;transcript_name=HG002_chrY_T0000180;gene_name=ZBED1;ID=exon:HG002_chrY_T0000180:0;Name=ZBED1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2165278	2167362	.	-	0	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=HG002_chrY_T0000180;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_T0000180;transcript_name=HG002_chrY_T0000180;gene_name=ZBED1;ID=CDS:HG002_chrY_T0000180:0;Name=ZBED1;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	2165278	2165280	.	-	0	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=HG002_chrY_T0000180;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_T0000180;transcript_name=HG002_chrY_T0000180;gene_name=ZBED1;ID=stop_codon:HG002_chrY_T0000180;Name=ZBED1;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	2167360	2167362	.	-	0	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=HG002_chrY_T0000180;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_T0000180;transcript_name=HG002_chrY_T0000180;gene_name=ZBED1;ID=start_codon:HG002_chrY_T0000180;Name=ZBED1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2167413	2177462	.	-	.	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=HG002_chrY_T0000180;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_T0000180;transcript_name=HG002_chrY_T0000180;gene_name=ZBED1;ID=intron:HG002_chrY_T0000180:0;Name=ZBED1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2177463	2177613	.	-	.	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=HG002_chrY_T0000180;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_T0000180;transcript_name=HG002_chrY_T0000180;gene_name=ZBED1;ID=exon:HG002_chrY_T0000180:1;Name=ZBED1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2163078	2177622	100	-	.	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=HG002_chrY_T0000181;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_G0000043;transcript_name=HG002_chrY_T0000181;gene_name=ZBED1;ID=HG002_chrY_T0000181;Name=ZBED1
HG002_chrY	CAT	exon	2163078	2167415	.	-	.	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=HG002_chrY_T0000181;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_T0000181;transcript_name=HG002_chrY_T0000181;gene_name=ZBED1;ID=exon:HG002_chrY_T0000181:0;Name=ZBED1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2165278	2167362	.	-	0	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=HG002_chrY_T0000181;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_T0000181;transcript_name=HG002_chrY_T0000181;gene_name=ZBED1;ID=CDS:HG002_chrY_T0000181:0;Name=ZBED1;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	2165278	2165280	.	-	0	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=HG002_chrY_T0000181;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_T0000181;transcript_name=HG002_chrY_T0000181;gene_name=ZBED1;ID=stop_codon:HG002_chrY_T0000181;Name=ZBED1;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	2167360	2167362	.	-	0	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=HG002_chrY_T0000181;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_T0000181;transcript_name=HG002_chrY_T0000181;gene_name=ZBED1;ID=start_codon:HG002_chrY_T0000181;Name=ZBED1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2167416	2177462	.	-	.	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=HG002_chrY_T0000181;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_T0000181;transcript_name=HG002_chrY_T0000181;gene_name=ZBED1;ID=intron:HG002_chrY_T0000181:0;Name=ZBED1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2177463	2177622	.	-	.	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=HG002_chrY_T0000181;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_T0000181;transcript_name=HG002_chrY_T0000181;gene_name=ZBED1;ID=exon:HG002_chrY_T0000181:1;Name=ZBED1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2163625	2165614	1000	-	.	source_transcript=ENST00000711170.1;source_transcript_name=ZBED1-209;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711170.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711170.1;transcript_score=299.779;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711170.1,ENST00000711170.1;transcript_id=HG002_chrY_T0000182;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_G0000043;transcript_name=HG002_chrY_T0000182;gene_name=ZBED1;ID=HG002_chrY_T0000182;Name=ZBED1
HG002_chrY	CAT	exon	2163625	2164345	.	-	.	source_transcript=ENST00000711170.1;source_transcript_name=ZBED1-209;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711170.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711170.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711170.1,ENST00000711170.1;transcript_id=HG002_chrY_T0000182;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_T0000182;transcript_name=HG002_chrY_T0000182;gene_name=ZBED1;ID=exon:HG002_chrY_T0000182:0;Name=ZBED1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2164346	2165430	.	-	.	source_transcript=ENST00000711170.1;source_transcript_name=ZBED1-209;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711170.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711170.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711170.1,ENST00000711170.1;transcript_id=HG002_chrY_T0000182;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_T0000182;transcript_name=HG002_chrY_T0000182;gene_name=ZBED1;ID=intron:HG002_chrY_T0000182:0;Name=ZBED1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2165431	2165614	.	-	.	source_transcript=ENST00000711170.1;source_transcript_name=ZBED1-209;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711170.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711170.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711170.1,ENST00000711170.1;transcript_id=HG002_chrY_T0000182;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_T0000182;transcript_name=HG002_chrY_T0000182;gene_name=ZBED1;ID=exon:HG002_chrY_T0000182:1;Name=ZBED1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2164829	2177201	100	-	.	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=HG002_chrY_T0000183;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_G0000043;transcript_name=HG002_chrY_T0000183;gene_name=ZBED1;ID=HG002_chrY_T0000183;Name=ZBED1
HG002_chrY	CAT	exon	2164829	2167415	.	-	.	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=HG002_chrY_T0000183;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_T0000183;transcript_name=HG002_chrY_T0000183;gene_name=ZBED1;ID=exon:HG002_chrY_T0000183:0;Name=ZBED1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2165278	2167362	.	-	0	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=HG002_chrY_T0000183;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_T0000183;transcript_name=HG002_chrY_T0000183;gene_name=ZBED1;ID=CDS:HG002_chrY_T0000183:0;Name=ZBED1;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	2165278	2165280	.	-	0	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=HG002_chrY_T0000183;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_T0000183;transcript_name=HG002_chrY_T0000183;gene_name=ZBED1;ID=stop_codon:HG002_chrY_T0000183;Name=ZBED1;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	2167360	2167362	.	-	0	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=HG002_chrY_T0000183;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_T0000183;transcript_name=HG002_chrY_T0000183;gene_name=ZBED1;ID=start_codon:HG002_chrY_T0000183;Name=ZBED1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2167416	2176956	.	-	.	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=HG002_chrY_T0000183;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_T0000183;transcript_name=HG002_chrY_T0000183;gene_name=ZBED1;ID=intron:HG002_chrY_T0000183:0;Name=ZBED1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2176957	2177201	.	-	.	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=HG002_chrY_T0000183;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_T0000183;transcript_name=HG002_chrY_T0000183;gene_name=ZBED1;ID=exon:HG002_chrY_T0000183:1;Name=ZBED1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2166548	2177541	100	-	.	source_transcript=ENST00000711168.1;source_transcript_name=ZBED1-207;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711168.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711168.1,ENST00000711168.1;transcript_id=HG002_chrY_T0000184;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_G0000043;transcript_name=HG002_chrY_T0000184;gene_name=ZBED1;ID=HG002_chrY_T0000184;Name=ZBED1
HG002_chrY	CAT	exon	2166548	2167415	.	-	.	source_transcript=ENST00000711168.1;source_transcript_name=ZBED1-207;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711168.1,ENST00000711168.1;transcript_id=HG002_chrY_T0000184;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_T0000184;transcript_name=HG002_chrY_T0000184;gene_name=ZBED1;ID=exon:HG002_chrY_T0000184:0;Name=ZBED1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2166548	2167362	.	-	0	source_transcript=ENST00000711168.1;source_transcript_name=ZBED1-207;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711168.1,ENST00000711168.1;transcript_id=HG002_chrY_T0000184;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_T0000184;transcript_name=HG002_chrY_T0000184;gene_name=ZBED1;ID=CDS:HG002_chrY_T0000184:0;Name=ZBED1;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	2167360	2167362	.	-	0	source_transcript=ENST00000711168.1;source_transcript_name=ZBED1-207;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711168.1,ENST00000711168.1;transcript_id=HG002_chrY_T0000184;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_T0000184;transcript_name=HG002_chrY_T0000184;gene_name=ZBED1;ID=start_codon:HG002_chrY_T0000184;Name=ZBED1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2167416	2177462	.	-	.	source_transcript=ENST00000711168.1;source_transcript_name=ZBED1-207;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711168.1,ENST00000711168.1;transcript_id=HG002_chrY_T0000184;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_T0000184;transcript_name=HG002_chrY_T0000184;gene_name=ZBED1;ID=intron:HG002_chrY_T0000184:0;Name=ZBED1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2177463	2177541	.	-	.	source_transcript=ENST00000711168.1;source_transcript_name=ZBED1-207;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711168.1,ENST00000711168.1;transcript_id=HG002_chrY_T0000184;gene_id=HG002_chrY_G0000043;Parent=HG002_chrY_T0000184;transcript_name=HG002_chrY_T0000184;gene_name=ZBED1;ID=exon:HG002_chrY_T0000184:1;Name=ZBED1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	2176891	2179759	.	+	.	source_gene_common_name=ENSG00000310551;source_gene=ENSG00000310551.1;alternative_source_transcripts=ENST00000850727.1,ENST00000850727.1;gene_id=HG002_chrY_G0000044;gene_biotype=lncRNA;gene_name=ENSG00000310551;gene_sources=liftoff;ID=HG002_chrY_G0000044;Name=ENSG00000310551
HG002_chrY	CAT	transcript	2176891	2179759	1000	+	.	source_transcript=ENST00000850727.1;source_transcript_name=ENST00000850727;source_gene=ENSG00000310551.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310551.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850727.1;transcript_score=299.194;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310551;alternative_source_transcripts=ENST00000850727.1,ENST00000850727.1;transcript_id=HG002_chrY_T0000185;gene_id=HG002_chrY_G0000044;Parent=HG002_chrY_G0000044;transcript_name=HG002_chrY_T0000185;gene_name=ENSG00000310551;ID=HG002_chrY_T0000185;Name=ENSG00000310551
HG002_chrY	CAT	exon	2176891	2176962	.	+	.	source_transcript=ENST00000850727.1;source_transcript_name=ENST00000850727;source_gene=ENSG00000310551.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310551.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850727.1;transcript_score=299.194;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310551;alternative_source_transcripts=ENST00000850727.1,ENST00000850727.1;transcript_id=HG002_chrY_T0000185;gene_id=HG002_chrY_G0000044;Parent=HG002_chrY_T0000185;transcript_name=HG002_chrY_T0000185;gene_name=ENSG00000310551;ID=exon:HG002_chrY_T0000185:0;Name=ENSG00000310551;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2176963	2179459	.	+	.	source_transcript=ENST00000850727.1;source_transcript_name=ENST00000850727;source_gene=ENSG00000310551.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310551.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850727.1;transcript_score=299.194;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310551;alternative_source_transcripts=ENST00000850727.1,ENST00000850727.1;transcript_id=HG002_chrY_T0000185;gene_id=HG002_chrY_G0000044;Parent=HG002_chrY_T0000185;transcript_name=HG002_chrY_T0000185;gene_name=ENSG00000310551;ID=intron:HG002_chrY_T0000185:0;Name=ENSG00000310551;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2179460	2179759	.	+	.	source_transcript=ENST00000850727.1;source_transcript_name=ENST00000850727;source_gene=ENSG00000310551.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310551.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850727.1;transcript_score=299.194;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310551;alternative_source_transcripts=ENST00000850727.1,ENST00000850727.1;transcript_id=HG002_chrY_T0000185;gene_id=HG002_chrY_G0000044;Parent=HG002_chrY_T0000185;transcript_name=HG002_chrY_T0000185;gene_name=ENSG00000310551;ID=exon:HG002_chrY_T0000185:1;Name=ENSG00000310551;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	2242477	2286093	.	-	.	source_gene_common_name=LINC03112;source_gene=ENSG00000292360.2;alternative_source_transcripts=ENST00000850835.1,ENST00000850835.1;gene_id=HG002_chrY_G0000045;gene_biotype=lncRNA;gene_name=LINC03112;gene_sources=liftoff;ID=HG002_chrY_G0000045;Name=LINC03112
HG002_chrY	CAT	transcript	2242477	2286093	1000	-	.	source_transcript=ENST00000850835.1;source_transcript_name=LINC03112-257;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850835.1;transcript_score=299.931;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850835.1,ENST00000850835.1;transcript_id=HG002_chrY_T0000186;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_G0000045;transcript_name=HG002_chrY_T0000186;gene_name=LINC03112;ID=HG002_chrY_T0000186;Name=LINC03112
HG002_chrY	CAT	exon	2242477	2243747	.	-	.	source_transcript=ENST00000850835.1;source_transcript_name=LINC03112-257;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850835.1;transcript_score=299.931;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850835.1,ENST00000850835.1;transcript_id=HG002_chrY_T0000186;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000186;transcript_name=HG002_chrY_T0000186;gene_name=LINC03112;ID=exon:HG002_chrY_T0000186:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2243748	2285906	.	-	.	source_transcript=ENST00000850835.1;source_transcript_name=LINC03112-257;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850835.1;transcript_score=299.931;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850835.1,ENST00000850835.1;transcript_id=HG002_chrY_T0000186;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000186;transcript_name=HG002_chrY_T0000186;gene_name=LINC03112;ID=intron:HG002_chrY_T0000186:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2285907	2286093	.	-	.	source_transcript=ENST00000850835.1;source_transcript_name=LINC03112-257;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850835.1;transcript_score=299.931;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850835.1,ENST00000850835.1;transcript_id=HG002_chrY_T0000186;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000186;transcript_name=HG002_chrY_T0000186;gene_name=LINC03112;ID=exon:HG002_chrY_T0000186:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2242479	2286006	1000	-	.	source_transcript=ENST00000850842.1;source_transcript_name=LINC03112-262;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850842.1;transcript_score=299.869;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850842.1,ENST00000850842.1;transcript_id=HG002_chrY_T0000187;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_G0000045;transcript_name=HG002_chrY_T0000187;gene_name=LINC03112;ID=HG002_chrY_T0000187;Name=LINC03112
HG002_chrY	CAT	exon	2242479	2243747	.	-	.	source_transcript=ENST00000850842.1;source_transcript_name=LINC03112-262;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850842.1;transcript_score=299.869;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850842.1,ENST00000850842.1;transcript_id=HG002_chrY_T0000187;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000187;transcript_name=HG002_chrY_T0000187;gene_name=LINC03112;ID=exon:HG002_chrY_T0000187:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2243748	2246464	.	-	.	source_transcript=ENST00000850842.1;source_transcript_name=LINC03112-262;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850842.1;transcript_score=299.869;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850842.1,ENST00000850842.1;transcript_id=HG002_chrY_T0000187;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000187;transcript_name=HG002_chrY_T0000187;gene_name=LINC03112;ID=intron:HG002_chrY_T0000187:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2246465	2246620	.	-	.	source_transcript=ENST00000850842.1;source_transcript_name=LINC03112-262;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850842.1;transcript_score=299.869;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850842.1,ENST00000850842.1;transcript_id=HG002_chrY_T0000187;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000187;transcript_name=HG002_chrY_T0000187;gene_name=LINC03112;ID=exon:HG002_chrY_T0000187:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2246621	2285906	.	-	.	source_transcript=ENST00000850842.1;source_transcript_name=LINC03112-262;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850842.1;transcript_score=299.869;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850842.1,ENST00000850842.1;transcript_id=HG002_chrY_T0000187;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000187;transcript_name=HG002_chrY_T0000187;gene_name=LINC03112;ID=intron:HG002_chrY_T0000187:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2285907	2286006	.	-	.	source_transcript=ENST00000850842.1;source_transcript_name=LINC03112-262;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850842.1;transcript_score=299.869;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850842.1,ENST00000850842.1;transcript_id=HG002_chrY_T0000187;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000187;transcript_name=HG002_chrY_T0000187;gene_name=LINC03112;ID=exon:HG002_chrY_T0000187:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2242480	2285993	1000	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.88800000000003;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=HG002_chrY_T0000188;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_G0000045;transcript_name=HG002_chrY_T0000188;gene_name=LINC03112;ID=HG002_chrY_T0000188;Name=LINC03112
HG002_chrY	CAT	exon	2242480	2243747	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.88800000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=HG002_chrY_T0000188;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000188;transcript_name=HG002_chrY_T0000188;gene_name=LINC03112;ID=exon:HG002_chrY_T0000188:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2243748	2246464	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.88800000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=HG002_chrY_T0000188;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000188;transcript_name=HG002_chrY_T0000188;gene_name=LINC03112;ID=intron:HG002_chrY_T0000188:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2246465	2246620	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.88800000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=HG002_chrY_T0000188;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000188;transcript_name=HG002_chrY_T0000188;gene_name=LINC03112;ID=exon:HG002_chrY_T0000188:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2246621	2281796	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.88800000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=HG002_chrY_T0000188;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000188;transcript_name=HG002_chrY_T0000188;gene_name=LINC03112;ID=intron:HG002_chrY_T0000188:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2281797	2282078	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.88800000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=HG002_chrY_T0000188;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000188;transcript_name=HG002_chrY_T0000188;gene_name=LINC03112;ID=exon:HG002_chrY_T0000188:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2282079	2285906	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.88800000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=HG002_chrY_T0000188;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000188;transcript_name=HG002_chrY_T0000188;gene_name=LINC03112;ID=intron:HG002_chrY_T0000188:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2285907	2285993	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.88800000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=HG002_chrY_T0000188;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000188;transcript_name=HG002_chrY_T0000188;gene_name=LINC03112;ID=exon:HG002_chrY_T0000188:3;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2242480	2286012	1000	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=299.826;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=HG002_chrY_T0000189;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_G0000045;transcript_name=HG002_chrY_T0000189;gene_name=LINC03112;ID=HG002_chrY_T0000189;Name=LINC03112
HG002_chrY	CAT	exon	2242480	2243747	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=HG002_chrY_T0000189;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000189;transcript_name=HG002_chrY_T0000189;gene_name=LINC03112;ID=exon:HG002_chrY_T0000189:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2243748	2246464	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=HG002_chrY_T0000189;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000189;transcript_name=HG002_chrY_T0000189;gene_name=LINC03112;ID=intron:HG002_chrY_T0000189:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2246465	2246620	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=HG002_chrY_T0000189;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000189;transcript_name=HG002_chrY_T0000189;gene_name=LINC03112;ID=exon:HG002_chrY_T0000189:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2246621	2250512	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=HG002_chrY_T0000189;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000189;transcript_name=HG002_chrY_T0000189;gene_name=LINC03112;ID=intron:HG002_chrY_T0000189:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2250513	2250706	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=HG002_chrY_T0000189;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000189;transcript_name=HG002_chrY_T0000189;gene_name=LINC03112;ID=exon:HG002_chrY_T0000189:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2250707	2285906	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=HG002_chrY_T0000189;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000189;transcript_name=HG002_chrY_T0000189;gene_name=LINC03112;ID=intron:HG002_chrY_T0000189:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2285907	2286012	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=HG002_chrY_T0000189;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000189;transcript_name=HG002_chrY_T0000189;gene_name=LINC03112;ID=exon:HG002_chrY_T0000189:3;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2242481	2285968	1000	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=299.796;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=HG002_chrY_T0000190;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_G0000045;transcript_name=HG002_chrY_T0000190;gene_name=LINC03112;ID=HG002_chrY_T0000190;Name=LINC03112
HG002_chrY	CAT	exon	2242481	2243100	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=HG002_chrY_T0000190;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000190;transcript_name=HG002_chrY_T0000190;gene_name=LINC03112;ID=exon:HG002_chrY_T0000190:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2243101	2243539	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=HG002_chrY_T0000190;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000190;transcript_name=HG002_chrY_T0000190;gene_name=LINC03112;ID=intron:HG002_chrY_T0000190:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2243540	2243747	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=HG002_chrY_T0000190;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000190;transcript_name=HG002_chrY_T0000190;gene_name=LINC03112;ID=exon:HG002_chrY_T0000190:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2243748	2246464	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=HG002_chrY_T0000190;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000190;transcript_name=HG002_chrY_T0000190;gene_name=LINC03112;ID=intron:HG002_chrY_T0000190:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2246465	2246552	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=HG002_chrY_T0000190;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000190;transcript_name=HG002_chrY_T0000190;gene_name=LINC03112;ID=exon:HG002_chrY_T0000190:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2246553	2285906	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=HG002_chrY_T0000190;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000190;transcript_name=HG002_chrY_T0000190;gene_name=LINC03112;ID=intron:HG002_chrY_T0000190:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2285907	2285968	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=HG002_chrY_T0000190;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000190;transcript_name=HG002_chrY_T0000190;gene_name=LINC03112;ID=exon:HG002_chrY_T0000190:3;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2242482	2285992	1000	-	.	source_transcript=ENST00000711240.1;source_transcript_name=LINC03112-233;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711240.1;transcript_score=299.93399999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711240.1,ENST00000711240.1;transcript_id=HG002_chrY_T0000191;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_G0000045;transcript_name=HG002_chrY_T0000191;gene_name=LINC03112;ID=HG002_chrY_T0000191;Name=LINC03112
HG002_chrY	CAT	exon	2242482	2243747	.	-	.	source_transcript=ENST00000711240.1;source_transcript_name=LINC03112-233;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711240.1;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711240.1,ENST00000711240.1;transcript_id=HG002_chrY_T0000191;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000191;transcript_name=HG002_chrY_T0000191;gene_name=LINC03112;ID=exon:HG002_chrY_T0000191:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2243748	2274094	.	-	.	source_transcript=ENST00000711240.1;source_transcript_name=LINC03112-233;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711240.1;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711240.1,ENST00000711240.1;transcript_id=HG002_chrY_T0000191;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000191;transcript_name=HG002_chrY_T0000191;gene_name=LINC03112;ID=intron:HG002_chrY_T0000191:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2274095	2274252	.	-	.	source_transcript=ENST00000711240.1;source_transcript_name=LINC03112-233;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711240.1;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711240.1,ENST00000711240.1;transcript_id=HG002_chrY_T0000191;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000191;transcript_name=HG002_chrY_T0000191;gene_name=LINC03112;ID=exon:HG002_chrY_T0000191:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2274253	2285906	.	-	.	source_transcript=ENST00000711240.1;source_transcript_name=LINC03112-233;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711240.1;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711240.1,ENST00000711240.1;transcript_id=HG002_chrY_T0000191;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000191;transcript_name=HG002_chrY_T0000191;gene_name=LINC03112;ID=intron:HG002_chrY_T0000191:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2285907	2285992	.	-	.	source_transcript=ENST00000711240.1;source_transcript_name=LINC03112-233;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711240.1;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711240.1,ENST00000711240.1;transcript_id=HG002_chrY_T0000191;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000191;transcript_name=HG002_chrY_T0000191;gene_name=LINC03112;ID=exon:HG002_chrY_T0000191:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2242482	2285969	1000	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=299.812;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=HG002_chrY_T0000192;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_G0000045;transcript_name=HG002_chrY_T0000192;gene_name=LINC03112;ID=HG002_chrY_T0000192;Name=LINC03112
HG002_chrY	CAT	exon	2242482	2243747	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=299.812;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=HG002_chrY_T0000192;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000192;transcript_name=HG002_chrY_T0000192;gene_name=LINC03112;ID=exon:HG002_chrY_T0000192:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2243748	2246464	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=299.812;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=HG002_chrY_T0000192;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000192;transcript_name=HG002_chrY_T0000192;gene_name=LINC03112;ID=intron:HG002_chrY_T0000192:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2246465	2246552	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=299.812;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=HG002_chrY_T0000192;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000192;transcript_name=HG002_chrY_T0000192;gene_name=LINC03112;ID=exon:HG002_chrY_T0000192:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2246553	2250529	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=299.812;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=HG002_chrY_T0000192;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000192;transcript_name=HG002_chrY_T0000192;gene_name=LINC03112;ID=intron:HG002_chrY_T0000192:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2250530	2250706	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=299.812;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=HG002_chrY_T0000192;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000192;transcript_name=HG002_chrY_T0000192;gene_name=LINC03112;ID=exon:HG002_chrY_T0000192:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2250707	2285906	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=299.812;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=HG002_chrY_T0000192;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000192;transcript_name=HG002_chrY_T0000192;gene_name=LINC03112;ID=intron:HG002_chrY_T0000192:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2285907	2285969	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=299.812;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=HG002_chrY_T0000192;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000192;transcript_name=HG002_chrY_T0000192;gene_name=LINC03112;ID=exon:HG002_chrY_T0000192:3;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2242482	2285997	1000	-	.	source_transcript=ENST00000850796.1;source_transcript_name=LINC03112-235;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850796.1;transcript_score=299.93899999999996;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850796.1,ENST00000850796.1;transcript_id=HG002_chrY_T0000193;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_G0000045;transcript_name=HG002_chrY_T0000193;gene_name=LINC03112;ID=HG002_chrY_T0000193;Name=LINC03112
HG002_chrY	CAT	exon	2242482	2243747	.	-	.	source_transcript=ENST00000850796.1;source_transcript_name=LINC03112-235;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850796.1;transcript_score=299.93899999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850796.1,ENST00000850796.1;transcript_id=HG002_chrY_T0000193;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000193;transcript_name=HG002_chrY_T0000193;gene_name=LINC03112;ID=exon:HG002_chrY_T0000193:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2243748	2281796	.	-	.	source_transcript=ENST00000850796.1;source_transcript_name=LINC03112-235;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850796.1;transcript_score=299.93899999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850796.1,ENST00000850796.1;transcript_id=HG002_chrY_T0000193;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000193;transcript_name=HG002_chrY_T0000193;gene_name=LINC03112;ID=intron:HG002_chrY_T0000193:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2281797	2282078	.	-	.	source_transcript=ENST00000850796.1;source_transcript_name=LINC03112-235;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850796.1;transcript_score=299.93899999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850796.1,ENST00000850796.1;transcript_id=HG002_chrY_T0000193;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000193;transcript_name=HG002_chrY_T0000193;gene_name=LINC03112;ID=exon:HG002_chrY_T0000193:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2282079	2285906	.	-	.	source_transcript=ENST00000850796.1;source_transcript_name=LINC03112-235;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850796.1;transcript_score=299.93899999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850796.1,ENST00000850796.1;transcript_id=HG002_chrY_T0000193;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000193;transcript_name=HG002_chrY_T0000193;gene_name=LINC03112;ID=intron:HG002_chrY_T0000193:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2285907	2285997	.	-	.	source_transcript=ENST00000850796.1;source_transcript_name=LINC03112-235;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850796.1;transcript_score=299.93899999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850796.1,ENST00000850796.1;transcript_id=HG002_chrY_T0000193;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000193;transcript_name=HG002_chrY_T0000193;gene_name=LINC03112;ID=exon:HG002_chrY_T0000193:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2242482	2285995	1000	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=299.813;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=HG002_chrY_T0000194;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_G0000045;transcript_name=HG002_chrY_T0000194;gene_name=LINC03112;ID=HG002_chrY_T0000194;Name=LINC03112
HG002_chrY	CAT	exon	2242482	2243747	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=HG002_chrY_T0000194;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000194;transcript_name=HG002_chrY_T0000194;gene_name=LINC03112;ID=exon:HG002_chrY_T0000194:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2243748	2246464	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=HG002_chrY_T0000194;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000194;transcript_name=HG002_chrY_T0000194;gene_name=LINC03112;ID=intron:HG002_chrY_T0000194:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2246465	2246620	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=HG002_chrY_T0000194;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000194;transcript_name=HG002_chrY_T0000194;gene_name=LINC03112;ID=exon:HG002_chrY_T0000194:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2246621	2250614	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=HG002_chrY_T0000194;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000194;transcript_name=HG002_chrY_T0000194;gene_name=LINC03112;ID=intron:HG002_chrY_T0000194:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2250615	2250706	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=HG002_chrY_T0000194;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000194;transcript_name=HG002_chrY_T0000194;gene_name=LINC03112;ID=exon:HG002_chrY_T0000194:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2250707	2285906	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=HG002_chrY_T0000194;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000194;transcript_name=HG002_chrY_T0000194;gene_name=LINC03112;ID=intron:HG002_chrY_T0000194:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2285907	2285995	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=HG002_chrY_T0000194;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000194;transcript_name=HG002_chrY_T0000194;gene_name=LINC03112;ID=exon:HG002_chrY_T0000194:3;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2242482	2285979	1000	-	.	source_transcript=ENST00000850802.1;source_transcript_name=LINC03112-241;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850802.1;transcript_score=299.752;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850802.1,ENST00000850802.1;transcript_id=HG002_chrY_T0000195;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_G0000045;transcript_name=HG002_chrY_T0000195;gene_name=LINC03112;ID=HG002_chrY_T0000195;Name=LINC03112
HG002_chrY	CAT	exon	2242482	2242603	.	-	.	source_transcript=ENST00000850802.1;source_transcript_name=LINC03112-241;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850802.1;transcript_score=299.752;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850802.1,ENST00000850802.1;transcript_id=HG002_chrY_T0000195;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000195;transcript_name=HG002_chrY_T0000195;gene_name=LINC03112;ID=exon:HG002_chrY_T0000195:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2242604	2243539	.	-	.	source_transcript=ENST00000850802.1;source_transcript_name=LINC03112-241;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850802.1;transcript_score=299.752;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850802.1,ENST00000850802.1;transcript_id=HG002_chrY_T0000195;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000195;transcript_name=HG002_chrY_T0000195;gene_name=LINC03112;ID=intron:HG002_chrY_T0000195:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2243540	2243747	.	-	.	source_transcript=ENST00000850802.1;source_transcript_name=LINC03112-241;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850802.1;transcript_score=299.752;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850802.1,ENST00000850802.1;transcript_id=HG002_chrY_T0000195;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000195;transcript_name=HG002_chrY_T0000195;gene_name=LINC03112;ID=exon:HG002_chrY_T0000195:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2243748	2285906	.	-	.	source_transcript=ENST00000850802.1;source_transcript_name=LINC03112-241;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850802.1;transcript_score=299.752;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850802.1,ENST00000850802.1;transcript_id=HG002_chrY_T0000195;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000195;transcript_name=HG002_chrY_T0000195;gene_name=LINC03112;ID=intron:HG002_chrY_T0000195:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2285907	2285979	.	-	.	source_transcript=ENST00000850802.1;source_transcript_name=LINC03112-241;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850802.1;transcript_score=299.752;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850802.1,ENST00000850802.1;transcript_id=HG002_chrY_T0000195;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000195;transcript_name=HG002_chrY_T0000195;gene_name=LINC03112;ID=exon:HG002_chrY_T0000195:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2242482	2285962	1000	-	.	source_transcript=ENST00000850809.1;source_transcript_name=LINC03112-248;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850809.1;transcript_score=299.85699999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850809.1,ENST00000850809.1;transcript_id=HG002_chrY_T0000196;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_G0000045;transcript_name=HG002_chrY_T0000196;gene_name=LINC03112;ID=HG002_chrY_T0000196;Name=LINC03112
HG002_chrY	CAT	exon	2242482	2243747	.	-	.	source_transcript=ENST00000850809.1;source_transcript_name=LINC03112-248;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850809.1;transcript_score=299.85699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850809.1,ENST00000850809.1;transcript_id=HG002_chrY_T0000196;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000196;transcript_name=HG002_chrY_T0000196;gene_name=LINC03112;ID=exon:HG002_chrY_T0000196:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2243748	2285826	.	-	.	source_transcript=ENST00000850809.1;source_transcript_name=LINC03112-248;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850809.1;transcript_score=299.85699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850809.1,ENST00000850809.1;transcript_id=HG002_chrY_T0000196;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000196;transcript_name=HG002_chrY_T0000196;gene_name=LINC03112;ID=intron:HG002_chrY_T0000196:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2285827	2285962	.	-	.	source_transcript=ENST00000850809.1;source_transcript_name=LINC03112-248;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850809.1;transcript_score=299.85699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850809.1,ENST00000850809.1;transcript_id=HG002_chrY_T0000196;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000196;transcript_name=HG002_chrY_T0000196;gene_name=LINC03112;ID=exon:HG002_chrY_T0000196:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2242482	2260782	1000	-	.	source_transcript=ENST00000850812.1;source_transcript_name=LINC03112-251;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850812.1;transcript_score=299.929;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850812.1,ENST00000850812.1;transcript_id=HG002_chrY_T0000197;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_G0000045;transcript_name=HG002_chrY_T0000197;gene_name=LINC03112;ID=HG002_chrY_T0000197;Name=LINC03112
HG002_chrY	CAT	exon	2242482	2243747	.	-	.	source_transcript=ENST00000850812.1;source_transcript_name=LINC03112-251;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850812.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850812.1,ENST00000850812.1;transcript_id=HG002_chrY_T0000197;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000197;transcript_name=HG002_chrY_T0000197;gene_name=LINC03112;ID=exon:HG002_chrY_T0000197:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2243748	2260644	.	-	.	source_transcript=ENST00000850812.1;source_transcript_name=LINC03112-251;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850812.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850812.1,ENST00000850812.1;transcript_id=HG002_chrY_T0000197;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000197;transcript_name=HG002_chrY_T0000197;gene_name=LINC03112;ID=intron:HG002_chrY_T0000197:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2260645	2260782	.	-	.	source_transcript=ENST00000850812.1;source_transcript_name=LINC03112-251;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850812.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850812.1,ENST00000850812.1;transcript_id=HG002_chrY_T0000197;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000197;transcript_name=HG002_chrY_T0000197;gene_name=LINC03112;ID=exon:HG002_chrY_T0000197:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2242482	2285990	1000	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=299.822;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=HG002_chrY_T0000198;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_G0000045;transcript_name=HG002_chrY_T0000198;gene_name=LINC03112;ID=HG002_chrY_T0000198;Name=LINC03112
HG002_chrY	CAT	exon	2242482	2243747	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=HG002_chrY_T0000198;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000198;transcript_name=HG002_chrY_T0000198;gene_name=LINC03112;ID=exon:HG002_chrY_T0000198:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2243748	2246464	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=HG002_chrY_T0000198;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000198;transcript_name=HG002_chrY_T0000198;gene_name=LINC03112;ID=intron:HG002_chrY_T0000198:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2246465	2246620	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=HG002_chrY_T0000198;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000198;transcript_name=HG002_chrY_T0000198;gene_name=LINC03112;ID=exon:HG002_chrY_T0000198:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2246621	2250529	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=HG002_chrY_T0000198;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000198;transcript_name=HG002_chrY_T0000198;gene_name=LINC03112;ID=intron:HG002_chrY_T0000198:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2250530	2250706	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=HG002_chrY_T0000198;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000198;transcript_name=HG002_chrY_T0000198;gene_name=LINC03112;ID=exon:HG002_chrY_T0000198:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2250707	2285906	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=HG002_chrY_T0000198;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000198;transcript_name=HG002_chrY_T0000198;gene_name=LINC03112;ID=intron:HG002_chrY_T0000198:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2285907	2285990	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=HG002_chrY_T0000198;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000198;transcript_name=HG002_chrY_T0000198;gene_name=LINC03112;ID=exon:HG002_chrY_T0000198:3;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2242482	2285984	1000	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=299.815;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=HG002_chrY_T0000199;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_G0000045;transcript_name=HG002_chrY_T0000199;gene_name=LINC03112;ID=HG002_chrY_T0000199;Name=LINC03112
HG002_chrY	CAT	exon	2242482	2243747	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=299.815;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=HG002_chrY_T0000199;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000199;transcript_name=HG002_chrY_T0000199;gene_name=LINC03112;ID=exon:HG002_chrY_T0000199:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2243748	2246464	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=299.815;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=HG002_chrY_T0000199;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000199;transcript_name=HG002_chrY_T0000199;gene_name=LINC03112;ID=intron:HG002_chrY_T0000199:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2246465	2246552	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=299.815;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=HG002_chrY_T0000199;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000199;transcript_name=HG002_chrY_T0000199;gene_name=LINC03112;ID=exon:HG002_chrY_T0000199:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2246553	2250512	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=299.815;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=HG002_chrY_T0000199;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000199;transcript_name=HG002_chrY_T0000199;gene_name=LINC03112;ID=intron:HG002_chrY_T0000199:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2250513	2250706	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=299.815;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=HG002_chrY_T0000199;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000199;transcript_name=HG002_chrY_T0000199;gene_name=LINC03112;ID=exon:HG002_chrY_T0000199:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2250707	2285906	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=299.815;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=HG002_chrY_T0000199;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000199;transcript_name=HG002_chrY_T0000199;gene_name=LINC03112;ID=intron:HG002_chrY_T0000199:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2285907	2285984	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=299.815;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=HG002_chrY_T0000199;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000199;transcript_name=HG002_chrY_T0000199;gene_name=LINC03112;ID=exon:HG002_chrY_T0000199:3;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2242482	2285986	1000	-	.	source_transcript=ENST00000850841.1;source_transcript_name=LINC03112-261;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850841.1;transcript_score=299.861;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850841.1,ENST00000850841.1;transcript_id=HG002_chrY_T0000200;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_G0000045;transcript_name=HG002_chrY_T0000200;gene_name=LINC03112;ID=HG002_chrY_T0000200;Name=LINC03112
HG002_chrY	CAT	exon	2242482	2243747	.	-	.	source_transcript=ENST00000850841.1;source_transcript_name=LINC03112-261;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850841.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850841.1,ENST00000850841.1;transcript_id=HG002_chrY_T0000200;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000200;transcript_name=HG002_chrY_T0000200;gene_name=LINC03112;ID=exon:HG002_chrY_T0000200:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2243748	2246464	.	-	.	source_transcript=ENST00000850841.1;source_transcript_name=LINC03112-261;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850841.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850841.1,ENST00000850841.1;transcript_id=HG002_chrY_T0000200;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000200;transcript_name=HG002_chrY_T0000200;gene_name=LINC03112;ID=intron:HG002_chrY_T0000200:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2246465	2246552	.	-	.	source_transcript=ENST00000850841.1;source_transcript_name=LINC03112-261;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850841.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850841.1,ENST00000850841.1;transcript_id=HG002_chrY_T0000200;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000200;transcript_name=HG002_chrY_T0000200;gene_name=LINC03112;ID=exon:HG002_chrY_T0000200:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2246553	2285906	.	-	.	source_transcript=ENST00000850841.1;source_transcript_name=LINC03112-261;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850841.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850841.1,ENST00000850841.1;transcript_id=HG002_chrY_T0000200;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000200;transcript_name=HG002_chrY_T0000200;gene_name=LINC03112;ID=intron:HG002_chrY_T0000200:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2285907	2285986	.	-	.	source_transcript=ENST00000850841.1;source_transcript_name=LINC03112-261;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850841.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850841.1,ENST00000850841.1;transcript_id=HG002_chrY_T0000200;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000200;transcript_name=HG002_chrY_T0000200;gene_name=LINC03112;ID=exon:HG002_chrY_T0000200:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2242483	2285984	1000	-	.	source_transcript=ENST00000711238.1;source_transcript_name=LINC03112-232;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711238.1;transcript_score=299.868;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711238.1,ENST00000711238.1;transcript_id=HG002_chrY_T0000201;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_G0000045;transcript_name=HG002_chrY_T0000201;gene_name=LINC03112;ID=HG002_chrY_T0000201;Name=LINC03112
HG002_chrY	CAT	exon	2242483	2243747	.	-	.	source_transcript=ENST00000711238.1;source_transcript_name=LINC03112-232;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711238.1;transcript_score=299.868;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711238.1,ENST00000711238.1;transcript_id=HG002_chrY_T0000201;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000201;transcript_name=HG002_chrY_T0000201;gene_name=LINC03112;ID=exon:HG002_chrY_T0000201:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2243748	2250529	.	-	.	source_transcript=ENST00000711238.1;source_transcript_name=LINC03112-232;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711238.1;transcript_score=299.868;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711238.1,ENST00000711238.1;transcript_id=HG002_chrY_T0000201;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000201;transcript_name=HG002_chrY_T0000201;gene_name=LINC03112;ID=intron:HG002_chrY_T0000201:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2250530	2250706	.	-	.	source_transcript=ENST00000711238.1;source_transcript_name=LINC03112-232;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711238.1;transcript_score=299.868;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711238.1,ENST00000711238.1;transcript_id=HG002_chrY_T0000201;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000201;transcript_name=HG002_chrY_T0000201;gene_name=LINC03112;ID=exon:HG002_chrY_T0000201:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2250707	2285906	.	-	.	source_transcript=ENST00000711238.1;source_transcript_name=LINC03112-232;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711238.1;transcript_score=299.868;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711238.1,ENST00000711238.1;transcript_id=HG002_chrY_T0000201;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000201;transcript_name=HG002_chrY_T0000201;gene_name=LINC03112;ID=intron:HG002_chrY_T0000201:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2285907	2285984	.	-	.	source_transcript=ENST00000711238.1;source_transcript_name=LINC03112-232;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711238.1;transcript_score=299.868;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711238.1,ENST00000711238.1;transcript_id=HG002_chrY_T0000201;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000201;transcript_name=HG002_chrY_T0000201;gene_name=LINC03112;ID=exon:HG002_chrY_T0000201:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2242484	2285993	1000	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=299.674;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=HG002_chrY_T0000202;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_G0000045;transcript_name=HG002_chrY_T0000202;gene_name=LINC03112;ID=HG002_chrY_T0000202;Name=LINC03112
HG002_chrY	CAT	exon	2242484	2243747	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=299.674;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=HG002_chrY_T0000202;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000202;transcript_name=HG002_chrY_T0000202;gene_name=LINC03112;ID=exon:HG002_chrY_T0000202:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2243748	2246464	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=299.674;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=HG002_chrY_T0000202;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000202;transcript_name=HG002_chrY_T0000202;gene_name=LINC03112;ID=intron:HG002_chrY_T0000202:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2246465	2246620	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=299.674;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=HG002_chrY_T0000202;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000202;transcript_name=HG002_chrY_T0000202;gene_name=LINC03112;ID=exon:HG002_chrY_T0000202:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2246621	2249574	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=299.674;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=HG002_chrY_T0000202;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000202;transcript_name=HG002_chrY_T0000202;gene_name=LINC03112;ID=intron:HG002_chrY_T0000202:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2249575	2249907	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=299.674;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=HG002_chrY_T0000202;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000202;transcript_name=HG002_chrY_T0000202;gene_name=LINC03112;ID=exon:HG002_chrY_T0000202:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2249908	2285906	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=299.674;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=HG002_chrY_T0000202;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000202;transcript_name=HG002_chrY_T0000202;gene_name=LINC03112;ID=intron:HG002_chrY_T0000202:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2285907	2285993	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=299.674;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=HG002_chrY_T0000202;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000202;transcript_name=HG002_chrY_T0000202;gene_name=LINC03112;ID=exon:HG002_chrY_T0000202:3;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2242484	2285993	1000	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.824;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=HG002_chrY_T0000203;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_G0000045;transcript_name=HG002_chrY_T0000203;gene_name=LINC03112;ID=HG002_chrY_T0000203;Name=LINC03112
HG002_chrY	CAT	exon	2242484	2243747	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.824;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=HG002_chrY_T0000203;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000203;transcript_name=HG002_chrY_T0000203;gene_name=LINC03112;ID=exon:HG002_chrY_T0000203:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2243748	2246464	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.824;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=HG002_chrY_T0000203;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000203;transcript_name=HG002_chrY_T0000203;gene_name=LINC03112;ID=intron:HG002_chrY_T0000203:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2246465	2246620	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.824;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=HG002_chrY_T0000203;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000203;transcript_name=HG002_chrY_T0000203;gene_name=LINC03112;ID=exon:HG002_chrY_T0000203:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2246621	2251338	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.824;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=HG002_chrY_T0000203;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000203;transcript_name=HG002_chrY_T0000203;gene_name=LINC03112;ID=intron:HG002_chrY_T0000203:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2251339	2251448	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.824;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=HG002_chrY_T0000203;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000203;transcript_name=HG002_chrY_T0000203;gene_name=LINC03112;ID=exon:HG002_chrY_T0000203:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2251449	2251596	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.824;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=HG002_chrY_T0000203;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000203;transcript_name=HG002_chrY_T0000203;gene_name=LINC03112;ID=intron:HG002_chrY_T0000203:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2251597	2251686	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.824;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=HG002_chrY_T0000203;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000203;transcript_name=HG002_chrY_T0000203;gene_name=LINC03112;ID=exon:HG002_chrY_T0000203:3;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2251687	2285906	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.824;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=HG002_chrY_T0000203;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000203;transcript_name=HG002_chrY_T0000203;gene_name=LINC03112;ID=intron:HG002_chrY_T0000203:3;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2285907	2285993	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.824;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=HG002_chrY_T0000203;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000203;transcript_name=HG002_chrY_T0000203;gene_name=LINC03112;ID=exon:HG002_chrY_T0000203:4;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2242484	2285985	1000	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.889;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=HG002_chrY_T0000204;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_G0000045;transcript_name=HG002_chrY_T0000204;gene_name=LINC03112;ID=HG002_chrY_T0000204;Name=LINC03112
HG002_chrY	CAT	exon	2242484	2243747	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=HG002_chrY_T0000204;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000204;transcript_name=HG002_chrY_T0000204;gene_name=LINC03112;ID=exon:HG002_chrY_T0000204:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2243748	2246464	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=HG002_chrY_T0000204;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000204;transcript_name=HG002_chrY_T0000204;gene_name=LINC03112;ID=intron:HG002_chrY_T0000204:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2246465	2246620	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=HG002_chrY_T0000204;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000204;transcript_name=HG002_chrY_T0000204;gene_name=LINC03112;ID=exon:HG002_chrY_T0000204:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2246621	2281796	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=HG002_chrY_T0000204;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000204;transcript_name=HG002_chrY_T0000204;gene_name=LINC03112;ID=intron:HG002_chrY_T0000204:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2281797	2282102	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=HG002_chrY_T0000204;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000204;transcript_name=HG002_chrY_T0000204;gene_name=LINC03112;ID=exon:HG002_chrY_T0000204:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2282103	2285906	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=HG002_chrY_T0000204;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000204;transcript_name=HG002_chrY_T0000204;gene_name=LINC03112;ID=intron:HG002_chrY_T0000204:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2285907	2285985	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=HG002_chrY_T0000204;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000204;transcript_name=HG002_chrY_T0000204;gene_name=LINC03112;ID=exon:HG002_chrY_T0000204:3;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2242484	2285972	1000	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.847;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=HG002_chrY_T0000205;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_G0000045;transcript_name=HG002_chrY_T0000205;gene_name=LINC03112;ID=HG002_chrY_T0000205;Name=LINC03112
HG002_chrY	CAT	exon	2242484	2243747	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.847;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=HG002_chrY_T0000205;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000205;transcript_name=HG002_chrY_T0000205;gene_name=LINC03112;ID=exon:HG002_chrY_T0000205:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2243748	2246464	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.847;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=HG002_chrY_T0000205;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000205;transcript_name=HG002_chrY_T0000205;gene_name=LINC03112;ID=intron:HG002_chrY_T0000205:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2246465	2246620	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.847;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=HG002_chrY_T0000205;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000205;transcript_name=HG002_chrY_T0000205;gene_name=LINC03112;ID=exon:HG002_chrY_T0000205:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2246621	2250512	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.847;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=HG002_chrY_T0000205;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000205;transcript_name=HG002_chrY_T0000205;gene_name=LINC03112;ID=intron:HG002_chrY_T0000205:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2250513	2250706	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.847;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=HG002_chrY_T0000205;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000205;transcript_name=HG002_chrY_T0000205;gene_name=LINC03112;ID=exon:HG002_chrY_T0000205:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2250707	2281796	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.847;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=HG002_chrY_T0000205;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000205;transcript_name=HG002_chrY_T0000205;gene_name=LINC03112;ID=intron:HG002_chrY_T0000205:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2281797	2282078	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.847;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=HG002_chrY_T0000205;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000205;transcript_name=HG002_chrY_T0000205;gene_name=LINC03112;ID=exon:HG002_chrY_T0000205:3;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2282079	2285906	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.847;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=HG002_chrY_T0000205;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000205;transcript_name=HG002_chrY_T0000205;gene_name=LINC03112;ID=intron:HG002_chrY_T0000205:3;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2285907	2285972	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.847;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=HG002_chrY_T0000205;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000205;transcript_name=HG002_chrY_T0000205;gene_name=LINC03112;ID=exon:HG002_chrY_T0000205:4;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2242484	2285969	1000	-	.	source_transcript=ENST00000850806.1;source_transcript_name=LINC03112-245;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850806.1;transcript_score=299.93899999999996;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850806.1,ENST00000850806.1;transcript_id=HG002_chrY_T0000206;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_G0000045;transcript_name=HG002_chrY_T0000206;gene_name=LINC03112;ID=HG002_chrY_T0000206;Name=LINC03112
HG002_chrY	CAT	exon	2242484	2243747	.	-	.	source_transcript=ENST00000850806.1;source_transcript_name=LINC03112-245;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850806.1;transcript_score=299.93899999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850806.1,ENST00000850806.1;transcript_id=HG002_chrY_T0000206;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000206;transcript_name=HG002_chrY_T0000206;gene_name=LINC03112;ID=exon:HG002_chrY_T0000206:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2243748	2281796	.	-	.	source_transcript=ENST00000850806.1;source_transcript_name=LINC03112-245;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850806.1;transcript_score=299.93899999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850806.1,ENST00000850806.1;transcript_id=HG002_chrY_T0000206;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000206;transcript_name=HG002_chrY_T0000206;gene_name=LINC03112;ID=intron:HG002_chrY_T0000206:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2281797	2282102	.	-	.	source_transcript=ENST00000850806.1;source_transcript_name=LINC03112-245;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850806.1;transcript_score=299.93899999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850806.1,ENST00000850806.1;transcript_id=HG002_chrY_T0000206;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000206;transcript_name=HG002_chrY_T0000206;gene_name=LINC03112;ID=exon:HG002_chrY_T0000206:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2282103	2285906	.	-	.	source_transcript=ENST00000850806.1;source_transcript_name=LINC03112-245;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850806.1;transcript_score=299.93899999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850806.1,ENST00000850806.1;transcript_id=HG002_chrY_T0000206;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000206;transcript_name=HG002_chrY_T0000206;gene_name=LINC03112;ID=intron:HG002_chrY_T0000206:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2285907	2285969	.	-	.	source_transcript=ENST00000850806.1;source_transcript_name=LINC03112-245;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850806.1;transcript_score=299.93899999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850806.1,ENST00000850806.1;transcript_id=HG002_chrY_T0000206;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000206;transcript_name=HG002_chrY_T0000206;gene_name=LINC03112;ID=exon:HG002_chrY_T0000206:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2242484	2285968	1000	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=299.801;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=HG002_chrY_T0000207;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_G0000045;transcript_name=HG002_chrY_T0000207;gene_name=LINC03112;ID=HG002_chrY_T0000207;Name=LINC03112
HG002_chrY	CAT	exon	2242484	2243747	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=299.801;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=HG002_chrY_T0000207;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000207;transcript_name=HG002_chrY_T0000207;gene_name=LINC03112;ID=exon:HG002_chrY_T0000207:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2243748	2246464	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=299.801;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=HG002_chrY_T0000207;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000207;transcript_name=HG002_chrY_T0000207;gene_name=LINC03112;ID=intron:HG002_chrY_T0000207:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2246465	2246552	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=299.801;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=HG002_chrY_T0000207;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000207;transcript_name=HG002_chrY_T0000207;gene_name=LINC03112;ID=exon:HG002_chrY_T0000207:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2246553	2250614	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=299.801;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=HG002_chrY_T0000207;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000207;transcript_name=HG002_chrY_T0000207;gene_name=LINC03112;ID=intron:HG002_chrY_T0000207:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2250615	2250706	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=299.801;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=HG002_chrY_T0000207;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000207;transcript_name=HG002_chrY_T0000207;gene_name=LINC03112;ID=exon:HG002_chrY_T0000207:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2250707	2285906	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=299.801;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=HG002_chrY_T0000207;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000207;transcript_name=HG002_chrY_T0000207;gene_name=LINC03112;ID=intron:HG002_chrY_T0000207:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2285907	2285968	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=299.801;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=HG002_chrY_T0000207;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000207;transcript_name=HG002_chrY_T0000207;gene_name=LINC03112;ID=exon:HG002_chrY_T0000207:3;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2242484	2285965	1000	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=299.871;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=HG002_chrY_T0000208;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_G0000045;transcript_name=HG002_chrY_T0000208;gene_name=LINC03112;ID=HG002_chrY_T0000208;Name=LINC03112
HG002_chrY	CAT	exon	2242484	2243747	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=HG002_chrY_T0000208;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000208;transcript_name=HG002_chrY_T0000208;gene_name=LINC03112;ID=exon:HG002_chrY_T0000208:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2243748	2246464	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=HG002_chrY_T0000208;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000208;transcript_name=HG002_chrY_T0000208;gene_name=LINC03112;ID=intron:HG002_chrY_T0000208:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2246465	2246620	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=HG002_chrY_T0000208;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000208;transcript_name=HG002_chrY_T0000208;gene_name=LINC03112;ID=exon:HG002_chrY_T0000208:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2246621	2258312	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=HG002_chrY_T0000208;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000208;transcript_name=HG002_chrY_T0000208;gene_name=LINC03112;ID=intron:HG002_chrY_T0000208:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2258313	2258389	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=HG002_chrY_T0000208;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000208;transcript_name=HG002_chrY_T0000208;gene_name=LINC03112;ID=exon:HG002_chrY_T0000208:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2258390	2285906	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=HG002_chrY_T0000208;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000208;transcript_name=HG002_chrY_T0000208;gene_name=LINC03112;ID=intron:HG002_chrY_T0000208:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2285907	2285965	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=HG002_chrY_T0000208;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000208;transcript_name=HG002_chrY_T0000208;gene_name=LINC03112;ID=exon:HG002_chrY_T0000208:3;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2242484	2285962	1000	-	.	source_transcript=ENST00000850810.1;source_transcript_name=LINC03112-249;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850810.1;transcript_score=299.569;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850810.1,ENST00000850810.1;transcript_id=HG002_chrY_T0000209;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_G0000045;transcript_name=HG002_chrY_T0000209;gene_name=LINC03112;ID=HG002_chrY_T0000209;Name=LINC03112
HG002_chrY	CAT	exon	2242484	2242603	.	-	.	source_transcript=ENST00000850810.1;source_transcript_name=LINC03112-249;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850810.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850810.1,ENST00000850810.1;transcript_id=HG002_chrY_T0000209;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000209;transcript_name=HG002_chrY_T0000209;gene_name=LINC03112;ID=exon:HG002_chrY_T0000209:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2242604	2243539	.	-	.	source_transcript=ENST00000850810.1;source_transcript_name=LINC03112-249;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850810.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850810.1,ENST00000850810.1;transcript_id=HG002_chrY_T0000209;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000209;transcript_name=HG002_chrY_T0000209;gene_name=LINC03112;ID=intron:HG002_chrY_T0000209:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2243540	2243747	.	-	.	source_transcript=ENST00000850810.1;source_transcript_name=LINC03112-249;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850810.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850810.1,ENST00000850810.1;transcript_id=HG002_chrY_T0000209;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000209;transcript_name=HG002_chrY_T0000209;gene_name=LINC03112;ID=exon:HG002_chrY_T0000209:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2243748	2285826	.	-	.	source_transcript=ENST00000850810.1;source_transcript_name=LINC03112-249;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850810.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850810.1,ENST00000850810.1;transcript_id=HG002_chrY_T0000209;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000209;transcript_name=HG002_chrY_T0000209;gene_name=LINC03112;ID=intron:HG002_chrY_T0000209:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2285827	2285962	.	-	.	source_transcript=ENST00000850810.1;source_transcript_name=LINC03112-249;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850810.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850810.1,ENST00000850810.1;transcript_id=HG002_chrY_T0000209;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000209;transcript_name=HG002_chrY_T0000209;gene_name=LINC03112;ID=exon:HG002_chrY_T0000209:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2242484	2285957	1000	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.837;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=HG002_chrY_T0000210;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_G0000045;transcript_name=HG002_chrY_T0000210;gene_name=LINC03112;ID=HG002_chrY_T0000210;Name=LINC03112
HG002_chrY	CAT	exon	2242484	2243747	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.837;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=HG002_chrY_T0000210;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000210;transcript_name=HG002_chrY_T0000210;gene_name=LINC03112;ID=exon:HG002_chrY_T0000210:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2243748	2246464	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.837;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=HG002_chrY_T0000210;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000210;transcript_name=HG002_chrY_T0000210;gene_name=LINC03112;ID=intron:HG002_chrY_T0000210:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2246465	2246620	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.837;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=HG002_chrY_T0000210;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000210;transcript_name=HG002_chrY_T0000210;gene_name=LINC03112;ID=exon:HG002_chrY_T0000210:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2246621	2250614	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.837;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=HG002_chrY_T0000210;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000210;transcript_name=HG002_chrY_T0000210;gene_name=LINC03112;ID=intron:HG002_chrY_T0000210:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2250615	2250706	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.837;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=HG002_chrY_T0000210;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000210;transcript_name=HG002_chrY_T0000210;gene_name=LINC03112;ID=exon:HG002_chrY_T0000210:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2250707	2281796	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.837;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=HG002_chrY_T0000210;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000210;transcript_name=HG002_chrY_T0000210;gene_name=LINC03112;ID=intron:HG002_chrY_T0000210:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2281797	2282078	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.837;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=HG002_chrY_T0000210;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000210;transcript_name=HG002_chrY_T0000210;gene_name=LINC03112;ID=exon:HG002_chrY_T0000210:3;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2282079	2285906	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.837;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=HG002_chrY_T0000210;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000210;transcript_name=HG002_chrY_T0000210;gene_name=LINC03112;ID=intron:HG002_chrY_T0000210:3;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2285907	2285957	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.837;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=HG002_chrY_T0000210;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000210;transcript_name=HG002_chrY_T0000210;gene_name=LINC03112;ID=exon:HG002_chrY_T0000210:4;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2242484	2260673	1000	-	.	source_transcript=ENST00000850813.1;source_transcript_name=LINC03112-252;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850813.1;transcript_score=299.86199999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850813.1,ENST00000850813.1;transcript_id=HG002_chrY_T0000211;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_G0000045;transcript_name=HG002_chrY_T0000211;gene_name=LINC03112;ID=HG002_chrY_T0000211;Name=LINC03112
HG002_chrY	CAT	exon	2242484	2243747	.	-	.	source_transcript=ENST00000850813.1;source_transcript_name=LINC03112-252;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850813.1;transcript_score=299.86199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850813.1,ENST00000850813.1;transcript_id=HG002_chrY_T0000211;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000211;transcript_name=HG002_chrY_T0000211;gene_name=LINC03112;ID=exon:HG002_chrY_T0000211:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2243748	2246464	.	-	.	source_transcript=ENST00000850813.1;source_transcript_name=LINC03112-252;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850813.1;transcript_score=299.86199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850813.1,ENST00000850813.1;transcript_id=HG002_chrY_T0000211;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000211;transcript_name=HG002_chrY_T0000211;gene_name=LINC03112;ID=intron:HG002_chrY_T0000211:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2246465	2246620	.	-	.	source_transcript=ENST00000850813.1;source_transcript_name=LINC03112-252;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850813.1;transcript_score=299.86199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850813.1,ENST00000850813.1;transcript_id=HG002_chrY_T0000211;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000211;transcript_name=HG002_chrY_T0000211;gene_name=LINC03112;ID=exon:HG002_chrY_T0000211:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2246621	2260644	.	-	.	source_transcript=ENST00000850813.1;source_transcript_name=LINC03112-252;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850813.1;transcript_score=299.86199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850813.1,ENST00000850813.1;transcript_id=HG002_chrY_T0000211;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000211;transcript_name=HG002_chrY_T0000211;gene_name=LINC03112;ID=intron:HG002_chrY_T0000211:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2260645	2260673	.	-	.	source_transcript=ENST00000850813.1;source_transcript_name=LINC03112-252;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850813.1;transcript_score=299.86199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850813.1,ENST00000850813.1;transcript_id=HG002_chrY_T0000211;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000211;transcript_name=HG002_chrY_T0000211;gene_name=LINC03112;ID=exon:HG002_chrY_T0000211:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2242484	2260405	1000	-	.	source_transcript=ENST00000850814.1;source_transcript_name=LINC03112-253;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850814.1;transcript_score=299.929;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850814.1,ENST00000850814.1;transcript_id=HG002_chrY_T0000212;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_G0000045;transcript_name=HG002_chrY_T0000212;gene_name=LINC03112;ID=HG002_chrY_T0000212;Name=LINC03112
HG002_chrY	CAT	exon	2242484	2243747	.	-	.	source_transcript=ENST00000850814.1;source_transcript_name=LINC03112-253;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850814.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850814.1,ENST00000850814.1;transcript_id=HG002_chrY_T0000212;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000212;transcript_name=HG002_chrY_T0000212;gene_name=LINC03112;ID=exon:HG002_chrY_T0000212:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2243748	2260252	.	-	.	source_transcript=ENST00000850814.1;source_transcript_name=LINC03112-253;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850814.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850814.1,ENST00000850814.1;transcript_id=HG002_chrY_T0000212;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000212;transcript_name=HG002_chrY_T0000212;gene_name=LINC03112;ID=intron:HG002_chrY_T0000212:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2260253	2260405	.	-	.	source_transcript=ENST00000850814.1;source_transcript_name=LINC03112-253;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850814.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850814.1,ENST00000850814.1;transcript_id=HG002_chrY_T0000212;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000212;transcript_name=HG002_chrY_T0000212;gene_name=LINC03112;ID=exon:HG002_chrY_T0000212:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2242487	2285984	1000	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.883;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=HG002_chrY_T0000213;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_G0000045;transcript_name=HG002_chrY_T0000213;gene_name=LINC03112;ID=HG002_chrY_T0000213;Name=LINC03112
HG002_chrY	CAT	exon	2242487	2243747	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=HG002_chrY_T0000213;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000213;transcript_name=HG002_chrY_T0000213;gene_name=LINC03112;ID=exon:HG002_chrY_T0000213:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2243748	2246464	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=HG002_chrY_T0000213;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000213;transcript_name=HG002_chrY_T0000213;gene_name=LINC03112;ID=intron:HG002_chrY_T0000213:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2246465	2246552	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=HG002_chrY_T0000213;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000213;transcript_name=HG002_chrY_T0000213;gene_name=LINC03112;ID=exon:HG002_chrY_T0000213:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2246553	2281796	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=HG002_chrY_T0000213;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000213;transcript_name=HG002_chrY_T0000213;gene_name=LINC03112;ID=intron:HG002_chrY_T0000213:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2281797	2282078	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=HG002_chrY_T0000213;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000213;transcript_name=HG002_chrY_T0000213;gene_name=LINC03112;ID=exon:HG002_chrY_T0000213:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2282079	2285906	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=HG002_chrY_T0000213;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000213;transcript_name=HG002_chrY_T0000213;gene_name=LINC03112;ID=intron:HG002_chrY_T0000213:2;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2285907	2285984	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=HG002_chrY_T0000213;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000213;transcript_name=HG002_chrY_T0000213;gene_name=LINC03112;ID=exon:HG002_chrY_T0000213:3;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2242487	2258506	1000	-	.	source_transcript=ENST00000850815.1;source_transcript_name=LINC03112-254;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850815.1;transcript_score=299.931;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850815.1,ENST00000850815.1;transcript_id=HG002_chrY_T0000214;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_G0000045;transcript_name=HG002_chrY_T0000214;gene_name=LINC03112;ID=HG002_chrY_T0000214;Name=LINC03112
HG002_chrY	CAT	exon	2242487	2243747	.	-	.	source_transcript=ENST00000850815.1;source_transcript_name=LINC03112-254;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850815.1;transcript_score=299.931;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850815.1,ENST00000850815.1;transcript_id=HG002_chrY_T0000214;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000214;transcript_name=HG002_chrY_T0000214;gene_name=LINC03112;ID=exon:HG002_chrY_T0000214:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2243748	2258312	.	-	.	source_transcript=ENST00000850815.1;source_transcript_name=LINC03112-254;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850815.1;transcript_score=299.931;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850815.1,ENST00000850815.1;transcript_id=HG002_chrY_T0000214;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000214;transcript_name=HG002_chrY_T0000214;gene_name=LINC03112;ID=intron:HG002_chrY_T0000214:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2258313	2258506	.	-	.	source_transcript=ENST00000850815.1;source_transcript_name=LINC03112-254;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850815.1;transcript_score=299.931;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850815.1,ENST00000850815.1;transcript_id=HG002_chrY_T0000214;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000214;transcript_name=HG002_chrY_T0000214;gene_name=LINC03112;ID=exon:HG002_chrY_T0000214:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2281711	2285973	1000	-	.	source_transcript=ENST00000850816.1;source_transcript_name=LINC03112-255;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850816.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850816.1,ENST00000850816.1;transcript_id=HG002_chrY_T0000219;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_G0000045;transcript_name=HG002_chrY_T0000219;gene_name=LINC03112;ID=HG002_chrY_T0000219;Name=LINC03112
HG002_chrY	CAT	exon	2281711	2282078	.	-	.	source_transcript=ENST00000850816.1;source_transcript_name=LINC03112-255;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850816.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850816.1,ENST00000850816.1;transcript_id=HG002_chrY_T0000219;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000219;transcript_name=HG002_chrY_T0000219;gene_name=LINC03112;ID=exon:HG002_chrY_T0000219:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2282079	2285906	.	-	.	source_transcript=ENST00000850816.1;source_transcript_name=LINC03112-255;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850816.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850816.1,ENST00000850816.1;transcript_id=HG002_chrY_T0000219;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000219;transcript_name=HG002_chrY_T0000219;gene_name=LINC03112;ID=intron:HG002_chrY_T0000219:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2285907	2285973	.	-	.	source_transcript=ENST00000850816.1;source_transcript_name=LINC03112-255;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850816.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850816.1,ENST00000850816.1;transcript_id=HG002_chrY_T0000219;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000219;transcript_name=HG002_chrY_T0000219;gene_name=LINC03112;ID=exon:HG002_chrY_T0000219:1;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2285252	2285984	1000	-	.	source_transcript=ENST00000850817.1;source_transcript_name=LINC03112-256;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850817.1;transcript_score=199.727;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850817.1,ENST00000850817.1;transcript_id=HG002_chrY_T0000221;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_G0000045;transcript_name=HG002_chrY_T0000221;gene_name=LINC03112;ID=HG002_chrY_T0000221;Name=LINC03112
HG002_chrY	CAT	exon	2285252	2285984	.	-	.	source_transcript=ENST00000850817.1;source_transcript_name=LINC03112-256;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850817.1;transcript_score=199.727;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850817.1,ENST00000850817.1;transcript_id=HG002_chrY_T0000221;gene_id=HG002_chrY_G0000045;Parent=HG002_chrY_T0000221;transcript_name=HG002_chrY_T0000221;gene_name=LINC03112;ID=exon:HG002_chrY_T0000221:0;Name=LINC03112;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	2260465	2282828	.	+	.	source_gene_common_name=ENSG00000310557;source_gene=ENSG00000310557.1;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;gene_id=HG002_chrY_G0000046;gene_biotype=lncRNA;gene_name=ENSG00000310557;gene_sources=liftoff;ID=HG002_chrY_G0000046;Name=ENSG00000310557
HG002_chrY	CAT	transcript	2260465	2282828	1000	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=HG002_chrY_T0000215;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_G0000046;transcript_name=HG002_chrY_T0000215;gene_name=ENSG00000310557;ID=HG002_chrY_T0000215;Name=ENSG00000310557
HG002_chrY	CAT	exon	2260465	2260656	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=HG002_chrY_T0000215;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_T0000215;transcript_name=HG002_chrY_T0000215;gene_name=ENSG00000310557;ID=exon:HG002_chrY_T0000215:0;Name=ENSG00000310557;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2260657	2270138	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=HG002_chrY_T0000215;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_T0000215;transcript_name=HG002_chrY_T0000215;gene_name=ENSG00000310557;ID=intron:HG002_chrY_T0000215:0;Name=ENSG00000310557;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2270139	2270213	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=HG002_chrY_T0000215;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_T0000215;transcript_name=HG002_chrY_T0000215;gene_name=ENSG00000310557;ID=exon:HG002_chrY_T0000215:1;Name=ENSG00000310557;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2270214	2273691	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=HG002_chrY_T0000215;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_T0000215;transcript_name=HG002_chrY_T0000215;gene_name=ENSG00000310557;ID=intron:HG002_chrY_T0000215:1;Name=ENSG00000310557;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2273692	2273854	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=HG002_chrY_T0000215;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_T0000215;transcript_name=HG002_chrY_T0000215;gene_name=ENSG00000310557;ID=exon:HG002_chrY_T0000215:2;Name=ENSG00000310557;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2273855	2282620	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=HG002_chrY_T0000215;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_T0000215;transcript_name=HG002_chrY_T0000215;gene_name=ENSG00000310557;ID=intron:HG002_chrY_T0000215:2;Name=ENSG00000310557;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2282621	2282828	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=HG002_chrY_T0000215;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_T0000215;transcript_name=HG002_chrY_T0000215;gene_name=ENSG00000310557;ID=exon:HG002_chrY_T0000215:3;Name=ENSG00000310557;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2260466	2280053	1000	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=HG002_chrY_T0000216;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_G0000046;transcript_name=HG002_chrY_T0000216;gene_name=ENSG00000310557;ID=HG002_chrY_T0000216;Name=ENSG00000310557
HG002_chrY	CAT	exon	2260466	2260656	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=HG002_chrY_T0000216;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_T0000216;transcript_name=HG002_chrY_T0000216;gene_name=ENSG00000310557;ID=exon:HG002_chrY_T0000216:0;Name=ENSG00000310557;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2260657	2270138	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=HG002_chrY_T0000216;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_T0000216;transcript_name=HG002_chrY_T0000216;gene_name=ENSG00000310557;ID=intron:HG002_chrY_T0000216:0;Name=ENSG00000310557;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2270139	2270213	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=HG002_chrY_T0000216;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_T0000216;transcript_name=HG002_chrY_T0000216;gene_name=ENSG00000310557;ID=exon:HG002_chrY_T0000216:1;Name=ENSG00000310557;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2270214	2273691	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=HG002_chrY_T0000216;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_T0000216;transcript_name=HG002_chrY_T0000216;gene_name=ENSG00000310557;ID=intron:HG002_chrY_T0000216:1;Name=ENSG00000310557;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2273692	2273854	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=HG002_chrY_T0000216;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_T0000216;transcript_name=HG002_chrY_T0000216;gene_name=ENSG00000310557;ID=exon:HG002_chrY_T0000216:2;Name=ENSG00000310557;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2273855	2279714	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=HG002_chrY_T0000216;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_T0000216;transcript_name=HG002_chrY_T0000216;gene_name=ENSG00000310557;ID=intron:HG002_chrY_T0000216:2;Name=ENSG00000310557;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2279715	2280053	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=HG002_chrY_T0000216;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_T0000216;transcript_name=HG002_chrY_T0000216;gene_name=ENSG00000310557;ID=exon:HG002_chrY_T0000216:3;Name=ENSG00000310557;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2260468	2282827	1000	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=HG002_chrY_T0000217;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_G0000046;transcript_name=HG002_chrY_T0000217;gene_name=ENSG00000310557;ID=HG002_chrY_T0000217;Name=ENSG00000310557
HG002_chrY	CAT	exon	2260468	2260656	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=HG002_chrY_T0000217;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_T0000217;transcript_name=HG002_chrY_T0000217;gene_name=ENSG00000310557;ID=exon:HG002_chrY_T0000217:0;Name=ENSG00000310557;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2260657	2269663	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=HG002_chrY_T0000217;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_T0000217;transcript_name=HG002_chrY_T0000217;gene_name=ENSG00000310557;ID=intron:HG002_chrY_T0000217:0;Name=ENSG00000310557;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2269664	2269790	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=HG002_chrY_T0000217;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_T0000217;transcript_name=HG002_chrY_T0000217;gene_name=ENSG00000310557;ID=exon:HG002_chrY_T0000217:1;Name=ENSG00000310557;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2269791	2270090	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=HG002_chrY_T0000217;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_T0000217;transcript_name=HG002_chrY_T0000217;gene_name=ENSG00000310557;ID=intron:HG002_chrY_T0000217:1;Name=ENSG00000310557;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2270091	2270213	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=HG002_chrY_T0000217;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_T0000217;transcript_name=HG002_chrY_T0000217;gene_name=ENSG00000310557;ID=exon:HG002_chrY_T0000217:2;Name=ENSG00000310557;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2270214	2273691	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=HG002_chrY_T0000217;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_T0000217;transcript_name=HG002_chrY_T0000217;gene_name=ENSG00000310557;ID=intron:HG002_chrY_T0000217:2;Name=ENSG00000310557;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2273692	2273854	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=HG002_chrY_T0000217;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_T0000217;transcript_name=HG002_chrY_T0000217;gene_name=ENSG00000310557;ID=exon:HG002_chrY_T0000217:3;Name=ENSG00000310557;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2273855	2282620	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=HG002_chrY_T0000217;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_T0000217;transcript_name=HG002_chrY_T0000217;gene_name=ENSG00000310557;ID=intron:HG002_chrY_T0000217:3;Name=ENSG00000310557;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2282621	2282827	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=HG002_chrY_T0000217;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_T0000217;transcript_name=HG002_chrY_T0000217;gene_name=ENSG00000310557;ID=exon:HG002_chrY_T0000217:4;Name=ENSG00000310557;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2260554	2280035	1000	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=HG002_chrY_T0000218;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_G0000046;transcript_name=HG002_chrY_T0000218;gene_name=ENSG00000310557;ID=HG002_chrY_T0000218;Name=ENSG00000310557
HG002_chrY	CAT	exon	2260554	2260656	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=HG002_chrY_T0000218;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_T0000218;transcript_name=HG002_chrY_T0000218;gene_name=ENSG00000310557;ID=exon:HG002_chrY_T0000218:0;Name=ENSG00000310557;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2260657	2269663	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=HG002_chrY_T0000218;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_T0000218;transcript_name=HG002_chrY_T0000218;gene_name=ENSG00000310557;ID=intron:HG002_chrY_T0000218:0;Name=ENSG00000310557;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2269664	2269790	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=HG002_chrY_T0000218;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_T0000218;transcript_name=HG002_chrY_T0000218;gene_name=ENSG00000310557;ID=exon:HG002_chrY_T0000218:1;Name=ENSG00000310557;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2269791	2270138	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=HG002_chrY_T0000218;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_T0000218;transcript_name=HG002_chrY_T0000218;gene_name=ENSG00000310557;ID=intron:HG002_chrY_T0000218:1;Name=ENSG00000310557;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2270139	2270213	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=HG002_chrY_T0000218;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_T0000218;transcript_name=HG002_chrY_T0000218;gene_name=ENSG00000310557;ID=exon:HG002_chrY_T0000218:2;Name=ENSG00000310557;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2270214	2273691	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=HG002_chrY_T0000218;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_T0000218;transcript_name=HG002_chrY_T0000218;gene_name=ENSG00000310557;ID=intron:HG002_chrY_T0000218:2;Name=ENSG00000310557;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2273692	2273854	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=HG002_chrY_T0000218;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_T0000218;transcript_name=HG002_chrY_T0000218;gene_name=ENSG00000310557;ID=exon:HG002_chrY_T0000218:3;Name=ENSG00000310557;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2273855	2279714	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=HG002_chrY_T0000218;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_T0000218;transcript_name=HG002_chrY_T0000218;gene_name=ENSG00000310557;ID=intron:HG002_chrY_T0000218:3;Name=ENSG00000310557;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2279715	2280035	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=HG002_chrY_T0000218;gene_id=HG002_chrY_G0000046;Parent=HG002_chrY_T0000218;transcript_name=HG002_chrY_T0000218;gene_name=ENSG00000310557;ID=exon:HG002_chrY_T0000218:4;Name=ENSG00000310557;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	2285207	2343462	.	+	.	source_gene_common_name=CD99P1;source_gene=ENSG00000292362.2;gene_id=HG002_chrY_G0000047;gene_biotype=lncRNA;gene_name=CD99P1;gene_sources=liftoff;ID=HG002_chrY_G0000047;Name=CD99P1
HG002_chrY	CAT	transcript	2285207	2315380	1000	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000220;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000220;gene_name=CD99P1;ID=HG002_chrY_T0000220;Name=CD99P1
HG002_chrY	CAT	exon	2285207	2285276	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000220;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000220;transcript_name=HG002_chrY_T0000220;gene_name=CD99P1;ID=exon:HG002_chrY_T0000220:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2285277	2287770	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000220;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000220;transcript_name=HG002_chrY_T0000220;gene_name=CD99P1;ID=intron:HG002_chrY_T0000220:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000220;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000220;transcript_name=HG002_chrY_T0000220;gene_name=CD99P1;ID=exon:HG002_chrY_T0000220:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000220;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000220;transcript_name=HG002_chrY_T0000220;gene_name=CD99P1;ID=intron:HG002_chrY_T0000220:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000220;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000220;transcript_name=HG002_chrY_T0000220;gene_name=CD99P1;ID=exon:HG002_chrY_T0000220:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000220;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000220;transcript_name=HG002_chrY_T0000220;gene_name=CD99P1;ID=intron:HG002_chrY_T0000220:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000220;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000220;transcript_name=HG002_chrY_T0000220;gene_name=CD99P1;ID=exon:HG002_chrY_T0000220:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295504	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000220;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000220;transcript_name=HG002_chrY_T0000220;gene_name=CD99P1;ID=intron:HG002_chrY_T0000220:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000220;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000220;transcript_name=HG002_chrY_T0000220;gene_name=CD99P1;ID=exon:HG002_chrY_T0000220:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000220;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000220;transcript_name=HG002_chrY_T0000220;gene_name=CD99P1;ID=intron:HG002_chrY_T0000220:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000220;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000220;transcript_name=HG002_chrY_T0000220;gene_name=CD99P1;ID=exon:HG002_chrY_T0000220:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2300151	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000220;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000220;transcript_name=HG002_chrY_T0000220;gene_name=CD99P1;ID=intron:HG002_chrY_T0000220:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000220;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000220;transcript_name=HG002_chrY_T0000220;gene_name=CD99P1;ID=exon:HG002_chrY_T0000220:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000220;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000220;transcript_name=HG002_chrY_T0000220;gene_name=CD99P1;ID=intron:HG002_chrY_T0000220:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000220;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000220;transcript_name=HG002_chrY_T0000220;gene_name=CD99P1;ID=exon:HG002_chrY_T0000220:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2315026	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000220;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000220;transcript_name=HG002_chrY_T0000220;gene_name=CD99P1;ID=intron:HG002_chrY_T0000220:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315380	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000220;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000220;transcript_name=HG002_chrY_T0000220;gene_name=CD99P1;ID=exon:HG002_chrY_T0000220:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2285647	2315386	1000	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000222;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000222;gene_name=CD99P1;ID=HG002_chrY_T0000222;Name=CD99P1
HG002_chrY	CAT	exon	2285647	2285769	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000222;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000222;transcript_name=HG002_chrY_T0000222;gene_name=CD99P1;ID=exon:HG002_chrY_T0000222:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2285770	2287770	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000222;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000222;transcript_name=HG002_chrY_T0000222;gene_name=CD99P1;ID=intron:HG002_chrY_T0000222:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000222;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000222;transcript_name=HG002_chrY_T0000222;gene_name=CD99P1;ID=exon:HG002_chrY_T0000222:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000222;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000222;transcript_name=HG002_chrY_T0000222;gene_name=CD99P1;ID=intron:HG002_chrY_T0000222:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000222;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000222;transcript_name=HG002_chrY_T0000222;gene_name=CD99P1;ID=exon:HG002_chrY_T0000222:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000222;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000222;transcript_name=HG002_chrY_T0000222;gene_name=CD99P1;ID=intron:HG002_chrY_T0000222:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000222;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000222;transcript_name=HG002_chrY_T0000222;gene_name=CD99P1;ID=exon:HG002_chrY_T0000222:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295504	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000222;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000222;transcript_name=HG002_chrY_T0000222;gene_name=CD99P1;ID=intron:HG002_chrY_T0000222:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000222;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000222;transcript_name=HG002_chrY_T0000222;gene_name=CD99P1;ID=exon:HG002_chrY_T0000222:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000222;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000222;transcript_name=HG002_chrY_T0000222;gene_name=CD99P1;ID=intron:HG002_chrY_T0000222:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000222;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000222;transcript_name=HG002_chrY_T0000222;gene_name=CD99P1;ID=exon:HG002_chrY_T0000222:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2300151	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000222;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000222;transcript_name=HG002_chrY_T0000222;gene_name=CD99P1;ID=intron:HG002_chrY_T0000222:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000222;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000222;transcript_name=HG002_chrY_T0000222;gene_name=CD99P1;ID=exon:HG002_chrY_T0000222:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000222;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000222;transcript_name=HG002_chrY_T0000222;gene_name=CD99P1;ID=intron:HG002_chrY_T0000222:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000222;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000222;transcript_name=HG002_chrY_T0000222;gene_name=CD99P1;ID=exon:HG002_chrY_T0000222:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2315026	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000222;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000222;transcript_name=HG002_chrY_T0000222;gene_name=CD99P1;ID=intron:HG002_chrY_T0000222:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315386	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000222;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000222;transcript_name=HG002_chrY_T0000222;gene_name=CD99P1;ID=exon:HG002_chrY_T0000222:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2285675	2315388	1000	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000223;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000223;gene_name=CD99P1;ID=HG002_chrY_T0000223;Name=CD99P1
HG002_chrY	CAT	exon	2285675	2285769	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000223;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000223;transcript_name=HG002_chrY_T0000223;gene_name=CD99P1;ID=exon:HG002_chrY_T0000223:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2285770	2287770	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000223;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000223;transcript_name=HG002_chrY_T0000223;gene_name=CD99P1;ID=intron:HG002_chrY_T0000223:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000223;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000223;transcript_name=HG002_chrY_T0000223;gene_name=CD99P1;ID=exon:HG002_chrY_T0000223:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000223;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000223;transcript_name=HG002_chrY_T0000223;gene_name=CD99P1;ID=intron:HG002_chrY_T0000223:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000223;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000223;transcript_name=HG002_chrY_T0000223;gene_name=CD99P1;ID=exon:HG002_chrY_T0000223:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000223;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000223;transcript_name=HG002_chrY_T0000223;gene_name=CD99P1;ID=intron:HG002_chrY_T0000223:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000223;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000223;transcript_name=HG002_chrY_T0000223;gene_name=CD99P1;ID=exon:HG002_chrY_T0000223:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295504	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000223;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000223;transcript_name=HG002_chrY_T0000223;gene_name=CD99P1;ID=intron:HG002_chrY_T0000223:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000223;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000223;transcript_name=HG002_chrY_T0000223;gene_name=CD99P1;ID=exon:HG002_chrY_T0000223:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000223;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000223;transcript_name=HG002_chrY_T0000223;gene_name=CD99P1;ID=intron:HG002_chrY_T0000223:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000223;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000223;transcript_name=HG002_chrY_T0000223;gene_name=CD99P1;ID=exon:HG002_chrY_T0000223:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2299456	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000223;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000223;transcript_name=HG002_chrY_T0000223;gene_name=CD99P1;ID=intron:HG002_chrY_T0000223:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2299457	2299501	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000223;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000223;transcript_name=HG002_chrY_T0000223;gene_name=CD99P1;ID=exon:HG002_chrY_T0000223:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2299502	2300151	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000223;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000223;transcript_name=HG002_chrY_T0000223;gene_name=CD99P1;ID=intron:HG002_chrY_T0000223:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000223;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000223;transcript_name=HG002_chrY_T0000223;gene_name=CD99P1;ID=exon:HG002_chrY_T0000223:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000223;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000223;transcript_name=HG002_chrY_T0000223;gene_name=CD99P1;ID=intron:HG002_chrY_T0000223:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000223;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000223;transcript_name=HG002_chrY_T0000223;gene_name=CD99P1;ID=exon:HG002_chrY_T0000223:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2315026	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000223;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000223;transcript_name=HG002_chrY_T0000223;gene_name=CD99P1;ID=intron:HG002_chrY_T0000223:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315388	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000223;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000223;transcript_name=HG002_chrY_T0000223;gene_name=CD99P1;ID=exon:HG002_chrY_T0000223:9;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2285730	2299574	1000	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000224;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000224;gene_name=CD99P1;ID=HG002_chrY_T0000224;Name=CD99P1
HG002_chrY	CAT	exon	2285730	2285769	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000224;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000224;transcript_name=HG002_chrY_T0000224;gene_name=CD99P1;ID=exon:HG002_chrY_T0000224:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2285770	2287770	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000224;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000224;transcript_name=HG002_chrY_T0000224;gene_name=CD99P1;ID=intron:HG002_chrY_T0000224:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000224;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000224;transcript_name=HG002_chrY_T0000224;gene_name=CD99P1;ID=exon:HG002_chrY_T0000224:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000224;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000224;transcript_name=HG002_chrY_T0000224;gene_name=CD99P1;ID=intron:HG002_chrY_T0000224:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000224;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000224;transcript_name=HG002_chrY_T0000224;gene_name=CD99P1;ID=exon:HG002_chrY_T0000224:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000224;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000224;transcript_name=HG002_chrY_T0000224;gene_name=CD99P1;ID=intron:HG002_chrY_T0000224:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000224;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000224;transcript_name=HG002_chrY_T0000224;gene_name=CD99P1;ID=exon:HG002_chrY_T0000224:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295504	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000224;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000224;transcript_name=HG002_chrY_T0000224;gene_name=CD99P1;ID=intron:HG002_chrY_T0000224:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000224;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000224;transcript_name=HG002_chrY_T0000224;gene_name=CD99P1;ID=exon:HG002_chrY_T0000224:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000224;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000224;transcript_name=HG002_chrY_T0000224;gene_name=CD99P1;ID=intron:HG002_chrY_T0000224:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000224;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000224;transcript_name=HG002_chrY_T0000224;gene_name=CD99P1;ID=exon:HG002_chrY_T0000224:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2299456	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000224;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000224;transcript_name=HG002_chrY_T0000224;gene_name=CD99P1;ID=intron:HG002_chrY_T0000224:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2299457	2299574	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000224;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000224;transcript_name=HG002_chrY_T0000224;gene_name=CD99P1;ID=exon:HG002_chrY_T0000224:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286132	2315388	1000	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000226;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000226;gene_name=CD99P1;ID=HG002_chrY_T0000226;Name=CD99P1
HG002_chrY	CAT	exon	2286132	2286270	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000226;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000226;transcript_name=HG002_chrY_T0000226;gene_name=CD99P1;ID=exon:HG002_chrY_T0000226:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000226;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000226;transcript_name=HG002_chrY_T0000226;gene_name=CD99P1;ID=intron:HG002_chrY_T0000226:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000226;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000226;transcript_name=HG002_chrY_T0000226;gene_name=CD99P1;ID=exon:HG002_chrY_T0000226:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000226;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000226;transcript_name=HG002_chrY_T0000226;gene_name=CD99P1;ID=intron:HG002_chrY_T0000226:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000226;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000226;transcript_name=HG002_chrY_T0000226;gene_name=CD99P1;ID=exon:HG002_chrY_T0000226:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2295504	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000226;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000226;transcript_name=HG002_chrY_T0000226;gene_name=CD99P1;ID=intron:HG002_chrY_T0000226:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000226;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000226;transcript_name=HG002_chrY_T0000226;gene_name=CD99P1;ID=exon:HG002_chrY_T0000226:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000226;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000226;transcript_name=HG002_chrY_T0000226;gene_name=CD99P1;ID=intron:HG002_chrY_T0000226:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000226;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000226;transcript_name=HG002_chrY_T0000226;gene_name=CD99P1;ID=exon:HG002_chrY_T0000226:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2300151	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000226;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000226;transcript_name=HG002_chrY_T0000226;gene_name=CD99P1;ID=intron:HG002_chrY_T0000226:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000226;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000226;transcript_name=HG002_chrY_T0000226;gene_name=CD99P1;ID=exon:HG002_chrY_T0000226:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000226;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000226;transcript_name=HG002_chrY_T0000226;gene_name=CD99P1;ID=intron:HG002_chrY_T0000226:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000226;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000226;transcript_name=HG002_chrY_T0000226;gene_name=CD99P1;ID=exon:HG002_chrY_T0000226:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2315026	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000226;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000226;transcript_name=HG002_chrY_T0000226;gene_name=CD99P1;ID=intron:HG002_chrY_T0000226:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315388	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000226;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000226;transcript_name=HG002_chrY_T0000226;gene_name=CD99P1;ID=exon:HG002_chrY_T0000226:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286141	2315382	1000	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000227;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000227;gene_name=CD99P1;ID=HG002_chrY_T0000227;Name=CD99P1
HG002_chrY	CAT	exon	2286141	2286270	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000227;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000227;transcript_name=HG002_chrY_T0000227;gene_name=CD99P1;ID=exon:HG002_chrY_T0000227:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000227;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000227;transcript_name=HG002_chrY_T0000227;gene_name=CD99P1;ID=intron:HG002_chrY_T0000227:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000227;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000227;transcript_name=HG002_chrY_T0000227;gene_name=CD99P1;ID=exon:HG002_chrY_T0000227:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000227;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000227;transcript_name=HG002_chrY_T0000227;gene_name=CD99P1;ID=intron:HG002_chrY_T0000227:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000227;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000227;transcript_name=HG002_chrY_T0000227;gene_name=CD99P1;ID=exon:HG002_chrY_T0000227:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000227;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000227;transcript_name=HG002_chrY_T0000227;gene_name=CD99P1;ID=intron:HG002_chrY_T0000227:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000227;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000227;transcript_name=HG002_chrY_T0000227;gene_name=CD99P1;ID=exon:HG002_chrY_T0000227:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295504	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000227;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000227;transcript_name=HG002_chrY_T0000227;gene_name=CD99P1;ID=intron:HG002_chrY_T0000227:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000227;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000227;transcript_name=HG002_chrY_T0000227;gene_name=CD99P1;ID=exon:HG002_chrY_T0000227:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000227;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000227;transcript_name=HG002_chrY_T0000227;gene_name=CD99P1;ID=intron:HG002_chrY_T0000227:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000227;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000227;transcript_name=HG002_chrY_T0000227;gene_name=CD99P1;ID=exon:HG002_chrY_T0000227:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2299456	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000227;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000227;transcript_name=HG002_chrY_T0000227;gene_name=CD99P1;ID=intron:HG002_chrY_T0000227:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2299457	2300220	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000227;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000227;transcript_name=HG002_chrY_T0000227;gene_name=CD99P1;ID=exon:HG002_chrY_T0000227:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000227;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000227;transcript_name=HG002_chrY_T0000227;gene_name=CD99P1;ID=intron:HG002_chrY_T0000227:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000227;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000227;transcript_name=HG002_chrY_T0000227;gene_name=CD99P1;ID=exon:HG002_chrY_T0000227:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2315026	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000227;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000227;transcript_name=HG002_chrY_T0000227;gene_name=CD99P1;ID=intron:HG002_chrY_T0000227:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315382	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000227;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000227;transcript_name=HG002_chrY_T0000227;gene_name=CD99P1;ID=exon:HG002_chrY_T0000227:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286143	2315389	1000	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000228;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000228;gene_name=CD99P1;ID=HG002_chrY_T0000228;Name=CD99P1
HG002_chrY	CAT	exon	2286143	2286270	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000228;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000228;transcript_name=HG002_chrY_T0000228;gene_name=CD99P1;ID=exon:HG002_chrY_T0000228:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000228;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000228;transcript_name=HG002_chrY_T0000228;gene_name=CD99P1;ID=intron:HG002_chrY_T0000228:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000228;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000228;transcript_name=HG002_chrY_T0000228;gene_name=CD99P1;ID=exon:HG002_chrY_T0000228:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000228;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000228;transcript_name=HG002_chrY_T0000228;gene_name=CD99P1;ID=intron:HG002_chrY_T0000228:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000228;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000228;transcript_name=HG002_chrY_T0000228;gene_name=CD99P1;ID=exon:HG002_chrY_T0000228:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000228;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000228;transcript_name=HG002_chrY_T0000228;gene_name=CD99P1;ID=intron:HG002_chrY_T0000228:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000228;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000228;transcript_name=HG002_chrY_T0000228;gene_name=CD99P1;ID=exon:HG002_chrY_T0000228:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295504	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000228;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000228;transcript_name=HG002_chrY_T0000228;gene_name=CD99P1;ID=intron:HG002_chrY_T0000228:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000228;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000228;transcript_name=HG002_chrY_T0000228;gene_name=CD99P1;ID=exon:HG002_chrY_T0000228:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000228;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000228;transcript_name=HG002_chrY_T0000228;gene_name=CD99P1;ID=intron:HG002_chrY_T0000228:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000228;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000228;transcript_name=HG002_chrY_T0000228;gene_name=CD99P1;ID=exon:HG002_chrY_T0000228:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2299456	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000228;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000228;transcript_name=HG002_chrY_T0000228;gene_name=CD99P1;ID=intron:HG002_chrY_T0000228:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2299457	2299501	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000228;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000228;transcript_name=HG002_chrY_T0000228;gene_name=CD99P1;ID=exon:HG002_chrY_T0000228:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2299502	2300151	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000228;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000228;transcript_name=HG002_chrY_T0000228;gene_name=CD99P1;ID=intron:HG002_chrY_T0000228:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000228;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000228;transcript_name=HG002_chrY_T0000228;gene_name=CD99P1;ID=exon:HG002_chrY_T0000228:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000228;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000228;transcript_name=HG002_chrY_T0000228;gene_name=CD99P1;ID=intron:HG002_chrY_T0000228:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000228;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000228;transcript_name=HG002_chrY_T0000228;gene_name=CD99P1;ID=exon:HG002_chrY_T0000228:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2315026	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000228;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000228;transcript_name=HG002_chrY_T0000228;gene_name=CD99P1;ID=intron:HG002_chrY_T0000228:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315389	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000228;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000228;transcript_name=HG002_chrY_T0000228;gene_name=CD99P1;ID=exon:HG002_chrY_T0000228:9;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286149	2315382	1000	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000229;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000229;gene_name=CD99P1;ID=HG002_chrY_T0000229;Name=CD99P1
HG002_chrY	CAT	exon	2286149	2286270	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000229;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000229;transcript_name=HG002_chrY_T0000229;gene_name=CD99P1;ID=exon:HG002_chrY_T0000229:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000229;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000229;transcript_name=HG002_chrY_T0000229;gene_name=CD99P1;ID=intron:HG002_chrY_T0000229:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000229;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000229;transcript_name=HG002_chrY_T0000229;gene_name=CD99P1;ID=exon:HG002_chrY_T0000229:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000229;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000229;transcript_name=HG002_chrY_T0000229;gene_name=CD99P1;ID=intron:HG002_chrY_T0000229:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000229;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000229;transcript_name=HG002_chrY_T0000229;gene_name=CD99P1;ID=exon:HG002_chrY_T0000229:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2315026	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000229;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000229;transcript_name=HG002_chrY_T0000229;gene_name=CD99P1;ID=intron:HG002_chrY_T0000229:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315382	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000229;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000229;transcript_name=HG002_chrY_T0000229;gene_name=CD99P1;ID=exon:HG002_chrY_T0000229:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286149	2315382	1000	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000230;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000230;gene_name=CD99P1;ID=HG002_chrY_T0000230;Name=CD99P1
HG002_chrY	CAT	exon	2286149	2286270	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000230;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000230;transcript_name=HG002_chrY_T0000230;gene_name=CD99P1;ID=exon:HG002_chrY_T0000230:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000230;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000230;transcript_name=HG002_chrY_T0000230;gene_name=CD99P1;ID=intron:HG002_chrY_T0000230:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000230;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000230;transcript_name=HG002_chrY_T0000230;gene_name=CD99P1;ID=exon:HG002_chrY_T0000230:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000230;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000230;transcript_name=HG002_chrY_T0000230;gene_name=CD99P1;ID=intron:HG002_chrY_T0000230:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000230;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000230;transcript_name=HG002_chrY_T0000230;gene_name=CD99P1;ID=exon:HG002_chrY_T0000230:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000230;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000230;transcript_name=HG002_chrY_T0000230;gene_name=CD99P1;ID=intron:HG002_chrY_T0000230:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000230;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000230;transcript_name=HG002_chrY_T0000230;gene_name=CD99P1;ID=exon:HG002_chrY_T0000230:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295504	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000230;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000230;transcript_name=HG002_chrY_T0000230;gene_name=CD99P1;ID=intron:HG002_chrY_T0000230:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000230;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000230;transcript_name=HG002_chrY_T0000230;gene_name=CD99P1;ID=exon:HG002_chrY_T0000230:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000230;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000230;transcript_name=HG002_chrY_T0000230;gene_name=CD99P1;ID=intron:HG002_chrY_T0000230:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000230;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000230;transcript_name=HG002_chrY_T0000230;gene_name=CD99P1;ID=exon:HG002_chrY_T0000230:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2299456	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000230;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000230;transcript_name=HG002_chrY_T0000230;gene_name=CD99P1;ID=intron:HG002_chrY_T0000230:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2299457	2299501	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000230;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000230;transcript_name=HG002_chrY_T0000230;gene_name=CD99P1;ID=exon:HG002_chrY_T0000230:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2299502	2300151	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000230;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000230;transcript_name=HG002_chrY_T0000230;gene_name=CD99P1;ID=intron:HG002_chrY_T0000230:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000230;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000230;transcript_name=HG002_chrY_T0000230;gene_name=CD99P1;ID=exon:HG002_chrY_T0000230:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2315026	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000230;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000230;transcript_name=HG002_chrY_T0000230;gene_name=CD99P1;ID=intron:HG002_chrY_T0000230:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315382	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000230;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000230;transcript_name=HG002_chrY_T0000230;gene_name=CD99P1;ID=exon:HG002_chrY_T0000230:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286149	2336126	1000	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000231;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000231;gene_name=CD99P1;ID=HG002_chrY_T0000231;Name=CD99P1
HG002_chrY	CAT	exon	2286149	2286270	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000231;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000231;transcript_name=HG002_chrY_T0000231;gene_name=CD99P1;ID=exon:HG002_chrY_T0000231:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000231;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000231;transcript_name=HG002_chrY_T0000231;gene_name=CD99P1;ID=intron:HG002_chrY_T0000231:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000231;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000231;transcript_name=HG002_chrY_T0000231;gene_name=CD99P1;ID=exon:HG002_chrY_T0000231:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000231;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000231;transcript_name=HG002_chrY_T0000231;gene_name=CD99P1;ID=intron:HG002_chrY_T0000231:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000231;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000231;transcript_name=HG002_chrY_T0000231;gene_name=CD99P1;ID=exon:HG002_chrY_T0000231:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000231;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000231;transcript_name=HG002_chrY_T0000231;gene_name=CD99P1;ID=intron:HG002_chrY_T0000231:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000231;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000231;transcript_name=HG002_chrY_T0000231;gene_name=CD99P1;ID=exon:HG002_chrY_T0000231:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295504	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000231;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000231;transcript_name=HG002_chrY_T0000231;gene_name=CD99P1;ID=intron:HG002_chrY_T0000231:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000231;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000231;transcript_name=HG002_chrY_T0000231;gene_name=CD99P1;ID=exon:HG002_chrY_T0000231:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000231;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000231;transcript_name=HG002_chrY_T0000231;gene_name=CD99P1;ID=intron:HG002_chrY_T0000231:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000231;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000231;transcript_name=HG002_chrY_T0000231;gene_name=CD99P1;ID=exon:HG002_chrY_T0000231:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2300151	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000231;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000231;transcript_name=HG002_chrY_T0000231;gene_name=CD99P1;ID=intron:HG002_chrY_T0000231:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000231;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000231;transcript_name=HG002_chrY_T0000231;gene_name=CD99P1;ID=exon:HG002_chrY_T0000231:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000231;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000231;transcript_name=HG002_chrY_T0000231;gene_name=CD99P1;ID=intron:HG002_chrY_T0000231:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000231;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000231;transcript_name=HG002_chrY_T0000231;gene_name=CD99P1;ID=exon:HG002_chrY_T0000231:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2335568	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000231;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000231;transcript_name=HG002_chrY_T0000231;gene_name=CD99P1;ID=intron:HG002_chrY_T0000231:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2335569	2336126	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000231;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000231;transcript_name=HG002_chrY_T0000231;gene_name=CD99P1;ID=exon:HG002_chrY_T0000231:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286149	2294270	1000	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000232;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000232;gene_name=CD99P1;ID=HG002_chrY_T0000232;Name=CD99P1
HG002_chrY	CAT	exon	2286149	2286270	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000232;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000232;transcript_name=HG002_chrY_T0000232;gene_name=CD99P1;ID=exon:HG002_chrY_T0000232:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000232;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000232;transcript_name=HG002_chrY_T0000232;gene_name=CD99P1;ID=intron:HG002_chrY_T0000232:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000232;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000232;transcript_name=HG002_chrY_T0000232;gene_name=CD99P1;ID=exon:HG002_chrY_T0000232:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000232;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000232;transcript_name=HG002_chrY_T0000232;gene_name=CD99P1;ID=intron:HG002_chrY_T0000232:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000232;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000232;transcript_name=HG002_chrY_T0000232;gene_name=CD99P1;ID=exon:HG002_chrY_T0000232:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000232;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000232;transcript_name=HG002_chrY_T0000232;gene_name=CD99P1;ID=intron:HG002_chrY_T0000232:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2294270	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000232;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000232;transcript_name=HG002_chrY_T0000232;gene_name=CD99P1;ID=exon:HG002_chrY_T0000232:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286149	2315777	1000	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000233;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000233;gene_name=CD99P1;ID=HG002_chrY_T0000233;Name=CD99P1
HG002_chrY	CAT	exon	2286149	2286270	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000233;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000233;transcript_name=HG002_chrY_T0000233;gene_name=CD99P1;ID=exon:HG002_chrY_T0000233:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000233;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000233;transcript_name=HG002_chrY_T0000233;gene_name=CD99P1;ID=intron:HG002_chrY_T0000233:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000233;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000233;transcript_name=HG002_chrY_T0000233;gene_name=CD99P1;ID=exon:HG002_chrY_T0000233:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000233;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000233;transcript_name=HG002_chrY_T0000233;gene_name=CD99P1;ID=intron:HG002_chrY_T0000233:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000233;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000233;transcript_name=HG002_chrY_T0000233;gene_name=CD99P1;ID=exon:HG002_chrY_T0000233:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000233;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000233;transcript_name=HG002_chrY_T0000233;gene_name=CD99P1;ID=intron:HG002_chrY_T0000233:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000233;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000233;transcript_name=HG002_chrY_T0000233;gene_name=CD99P1;ID=exon:HG002_chrY_T0000233:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295504	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000233;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000233;transcript_name=HG002_chrY_T0000233;gene_name=CD99P1;ID=intron:HG002_chrY_T0000233:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000233;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000233;transcript_name=HG002_chrY_T0000233;gene_name=CD99P1;ID=exon:HG002_chrY_T0000233:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000233;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000233;transcript_name=HG002_chrY_T0000233;gene_name=CD99P1;ID=intron:HG002_chrY_T0000233:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000233;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000233;transcript_name=HG002_chrY_T0000233;gene_name=CD99P1;ID=exon:HG002_chrY_T0000233:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2300151	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000233;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000233;transcript_name=HG002_chrY_T0000233;gene_name=CD99P1;ID=intron:HG002_chrY_T0000233:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000233;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000233;transcript_name=HG002_chrY_T0000233;gene_name=CD99P1;ID=exon:HG002_chrY_T0000233:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000233;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000233;transcript_name=HG002_chrY_T0000233;gene_name=CD99P1;ID=intron:HG002_chrY_T0000233:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000233;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000233;transcript_name=HG002_chrY_T0000233;gene_name=CD99P1;ID=exon:HG002_chrY_T0000233:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2315026	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000233;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000233;transcript_name=HG002_chrY_T0000233;gene_name=CD99P1;ID=intron:HG002_chrY_T0000233:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315777	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000233;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000233;transcript_name=HG002_chrY_T0000233;gene_name=CD99P1;ID=exon:HG002_chrY_T0000233:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286158	2315388	1000	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000234;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000234;gene_name=CD99P1;ID=HG002_chrY_T0000234;Name=CD99P1
HG002_chrY	CAT	exon	2286158	2286270	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000234;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000234;transcript_name=HG002_chrY_T0000234;gene_name=CD99P1;ID=exon:HG002_chrY_T0000234:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000234;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000234;transcript_name=HG002_chrY_T0000234;gene_name=CD99P1;ID=intron:HG002_chrY_T0000234:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000234;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000234;transcript_name=HG002_chrY_T0000234;gene_name=CD99P1;ID=exon:HG002_chrY_T0000234:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000234;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000234;transcript_name=HG002_chrY_T0000234;gene_name=CD99P1;ID=intron:HG002_chrY_T0000234:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000234;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000234;transcript_name=HG002_chrY_T0000234;gene_name=CD99P1;ID=exon:HG002_chrY_T0000234:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000234;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000234;transcript_name=HG002_chrY_T0000234;gene_name=CD99P1;ID=intron:HG002_chrY_T0000234:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000234;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000234;transcript_name=HG002_chrY_T0000234;gene_name=CD99P1;ID=exon:HG002_chrY_T0000234:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295504	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000234;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000234;transcript_name=HG002_chrY_T0000234;gene_name=CD99P1;ID=intron:HG002_chrY_T0000234:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000234;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000234;transcript_name=HG002_chrY_T0000234;gene_name=CD99P1;ID=exon:HG002_chrY_T0000234:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000234;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000234;transcript_name=HG002_chrY_T0000234;gene_name=CD99P1;ID=intron:HG002_chrY_T0000234:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000234;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000234;transcript_name=HG002_chrY_T0000234;gene_name=CD99P1;ID=exon:HG002_chrY_T0000234:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2315026	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000234;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000234;transcript_name=HG002_chrY_T0000234;gene_name=CD99P1;ID=intron:HG002_chrY_T0000234:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315388	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000234;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000234;transcript_name=HG002_chrY_T0000234;gene_name=CD99P1;ID=exon:HG002_chrY_T0000234:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286165	2343461	1000	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000235;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000235;gene_name=CD99P1;ID=HG002_chrY_T0000235;Name=CD99P1
HG002_chrY	CAT	exon	2286165	2286270	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000235;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000235;transcript_name=HG002_chrY_T0000235;gene_name=CD99P1;ID=exon:HG002_chrY_T0000235:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000235;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000235;transcript_name=HG002_chrY_T0000235;gene_name=CD99P1;ID=intron:HG002_chrY_T0000235:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000235;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000235;transcript_name=HG002_chrY_T0000235;gene_name=CD99P1;ID=exon:HG002_chrY_T0000235:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000235;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000235;transcript_name=HG002_chrY_T0000235;gene_name=CD99P1;ID=intron:HG002_chrY_T0000235:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000235;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000235;transcript_name=HG002_chrY_T0000235;gene_name=CD99P1;ID=exon:HG002_chrY_T0000235:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000235;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000235;transcript_name=HG002_chrY_T0000235;gene_name=CD99P1;ID=intron:HG002_chrY_T0000235:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000235;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000235;transcript_name=HG002_chrY_T0000235;gene_name=CD99P1;ID=exon:HG002_chrY_T0000235:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295504	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000235;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000235;transcript_name=HG002_chrY_T0000235;gene_name=CD99P1;ID=intron:HG002_chrY_T0000235:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000235;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000235;transcript_name=HG002_chrY_T0000235;gene_name=CD99P1;ID=exon:HG002_chrY_T0000235:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000235;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000235;transcript_name=HG002_chrY_T0000235;gene_name=CD99P1;ID=intron:HG002_chrY_T0000235:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000235;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000235;transcript_name=HG002_chrY_T0000235;gene_name=CD99P1;ID=exon:HG002_chrY_T0000235:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2299456	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000235;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000235;transcript_name=HG002_chrY_T0000235;gene_name=CD99P1;ID=intron:HG002_chrY_T0000235:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2299457	2299501	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000235;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000235;transcript_name=HG002_chrY_T0000235;gene_name=CD99P1;ID=exon:HG002_chrY_T0000235:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2299502	2300151	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000235;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000235;transcript_name=HG002_chrY_T0000235;gene_name=CD99P1;ID=intron:HG002_chrY_T0000235:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000235;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000235;transcript_name=HG002_chrY_T0000235;gene_name=CD99P1;ID=exon:HG002_chrY_T0000235:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000235;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000235;transcript_name=HG002_chrY_T0000235;gene_name=CD99P1;ID=intron:HG002_chrY_T0000235:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000235;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000235;transcript_name=HG002_chrY_T0000235;gene_name=CD99P1;ID=exon:HG002_chrY_T0000235:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2342941	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000235;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000235;transcript_name=HG002_chrY_T0000235;gene_name=CD99P1;ID=intron:HG002_chrY_T0000235:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2342942	2343461	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000235;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000235;transcript_name=HG002_chrY_T0000235;gene_name=CD99P1;ID=exon:HG002_chrY_T0000235:9;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286165	2315388	1000	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000236;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000236;gene_name=CD99P1;ID=HG002_chrY_T0000236;Name=CD99P1
HG002_chrY	CAT	exon	2286165	2286270	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000236;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000236;transcript_name=HG002_chrY_T0000236;gene_name=CD99P1;ID=exon:HG002_chrY_T0000236:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000236;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000236;transcript_name=HG002_chrY_T0000236;gene_name=CD99P1;ID=intron:HG002_chrY_T0000236:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000236;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000236;transcript_name=HG002_chrY_T0000236;gene_name=CD99P1;ID=exon:HG002_chrY_T0000236:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000236;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000236;transcript_name=HG002_chrY_T0000236;gene_name=CD99P1;ID=intron:HG002_chrY_T0000236:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000236;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000236;transcript_name=HG002_chrY_T0000236;gene_name=CD99P1;ID=exon:HG002_chrY_T0000236:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000236;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000236;transcript_name=HG002_chrY_T0000236;gene_name=CD99P1;ID=intron:HG002_chrY_T0000236:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000236;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000236;transcript_name=HG002_chrY_T0000236;gene_name=CD99P1;ID=exon:HG002_chrY_T0000236:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295504	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000236;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000236;transcript_name=HG002_chrY_T0000236;gene_name=CD99P1;ID=intron:HG002_chrY_T0000236:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000236;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000236;transcript_name=HG002_chrY_T0000236;gene_name=CD99P1;ID=exon:HG002_chrY_T0000236:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000236;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000236;transcript_name=HG002_chrY_T0000236;gene_name=CD99P1;ID=intron:HG002_chrY_T0000236:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000236;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000236;transcript_name=HG002_chrY_T0000236;gene_name=CD99P1;ID=exon:HG002_chrY_T0000236:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2300151	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000236;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000236;transcript_name=HG002_chrY_T0000236;gene_name=CD99P1;ID=intron:HG002_chrY_T0000236:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000236;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000236;transcript_name=HG002_chrY_T0000236;gene_name=CD99P1;ID=exon:HG002_chrY_T0000236:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2315026	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000236;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000236;transcript_name=HG002_chrY_T0000236;gene_name=CD99P1;ID=intron:HG002_chrY_T0000236:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315388	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000236;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000236;transcript_name=HG002_chrY_T0000236;gene_name=CD99P1;ID=exon:HG002_chrY_T0000236:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286165	2315777	1000	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000237;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000237;gene_name=CD99P1;ID=HG002_chrY_T0000237;Name=CD99P1
HG002_chrY	CAT	exon	2286165	2286270	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000237;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000237;transcript_name=HG002_chrY_T0000237;gene_name=CD99P1;ID=exon:HG002_chrY_T0000237:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000237;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000237;transcript_name=HG002_chrY_T0000237;gene_name=CD99P1;ID=intron:HG002_chrY_T0000237:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000237;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000237;transcript_name=HG002_chrY_T0000237;gene_name=CD99P1;ID=exon:HG002_chrY_T0000237:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000237;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000237;transcript_name=HG002_chrY_T0000237;gene_name=CD99P1;ID=intron:HG002_chrY_T0000237:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000237;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000237;transcript_name=HG002_chrY_T0000237;gene_name=CD99P1;ID=exon:HG002_chrY_T0000237:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2295504	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000237;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000237;transcript_name=HG002_chrY_T0000237;gene_name=CD99P1;ID=intron:HG002_chrY_T0000237:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000237;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000237;transcript_name=HG002_chrY_T0000237;gene_name=CD99P1;ID=exon:HG002_chrY_T0000237:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000237;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000237;transcript_name=HG002_chrY_T0000237;gene_name=CD99P1;ID=intron:HG002_chrY_T0000237:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000237;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000237;transcript_name=HG002_chrY_T0000237;gene_name=CD99P1;ID=exon:HG002_chrY_T0000237:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2299456	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000237;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000237;transcript_name=HG002_chrY_T0000237;gene_name=CD99P1;ID=intron:HG002_chrY_T0000237:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2299457	2299501	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000237;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000237;transcript_name=HG002_chrY_T0000237;gene_name=CD99P1;ID=exon:HG002_chrY_T0000237:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2299502	2300151	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000237;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000237;transcript_name=HG002_chrY_T0000237;gene_name=CD99P1;ID=intron:HG002_chrY_T0000237:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000237;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000237;transcript_name=HG002_chrY_T0000237;gene_name=CD99P1;ID=exon:HG002_chrY_T0000237:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000237;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000237;transcript_name=HG002_chrY_T0000237;gene_name=CD99P1;ID=intron:HG002_chrY_T0000237:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000237;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000237;transcript_name=HG002_chrY_T0000237;gene_name=CD99P1;ID=exon:HG002_chrY_T0000237:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2315026	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000237;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000237;transcript_name=HG002_chrY_T0000237;gene_name=CD99P1;ID=intron:HG002_chrY_T0000237:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315777	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000237;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000237;transcript_name=HG002_chrY_T0000237;gene_name=CD99P1;ID=exon:HG002_chrY_T0000237:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286175	2315774	1000	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000238;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000238;gene_name=CD99P1;ID=HG002_chrY_T0000238;Name=CD99P1
HG002_chrY	CAT	exon	2286175	2286270	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000238;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000238;transcript_name=HG002_chrY_T0000238;gene_name=CD99P1;ID=exon:HG002_chrY_T0000238:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000238;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000238;transcript_name=HG002_chrY_T0000238;gene_name=CD99P1;ID=intron:HG002_chrY_T0000238:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000238;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000238;transcript_name=HG002_chrY_T0000238;gene_name=CD99P1;ID=exon:HG002_chrY_T0000238:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000238;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000238;transcript_name=HG002_chrY_T0000238;gene_name=CD99P1;ID=intron:HG002_chrY_T0000238:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000238;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000238;transcript_name=HG002_chrY_T0000238;gene_name=CD99P1;ID=exon:HG002_chrY_T0000238:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000238;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000238;transcript_name=HG002_chrY_T0000238;gene_name=CD99P1;ID=intron:HG002_chrY_T0000238:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000238;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000238;transcript_name=HG002_chrY_T0000238;gene_name=CD99P1;ID=exon:HG002_chrY_T0000238:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295504	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000238;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000238;transcript_name=HG002_chrY_T0000238;gene_name=CD99P1;ID=intron:HG002_chrY_T0000238:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000238;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000238;transcript_name=HG002_chrY_T0000238;gene_name=CD99P1;ID=exon:HG002_chrY_T0000238:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296158	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000238;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000238;transcript_name=HG002_chrY_T0000238;gene_name=CD99P1;ID=intron:HG002_chrY_T0000238:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296159	2296262	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000238;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000238;transcript_name=HG002_chrY_T0000238;gene_name=CD99P1;ID=exon:HG002_chrY_T0000238:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2300151	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000238;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000238;transcript_name=HG002_chrY_T0000238;gene_name=CD99P1;ID=intron:HG002_chrY_T0000238:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000238;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000238;transcript_name=HG002_chrY_T0000238;gene_name=CD99P1;ID=exon:HG002_chrY_T0000238:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000238;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000238;transcript_name=HG002_chrY_T0000238;gene_name=CD99P1;ID=intron:HG002_chrY_T0000238:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000238;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000238;transcript_name=HG002_chrY_T0000238;gene_name=CD99P1;ID=exon:HG002_chrY_T0000238:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2315026	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000238;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000238;transcript_name=HG002_chrY_T0000238;gene_name=CD99P1;ID=intron:HG002_chrY_T0000238:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315774	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000238;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000238;transcript_name=HG002_chrY_T0000238;gene_name=CD99P1;ID=exon:HG002_chrY_T0000238:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286175	2315382	1000	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000239;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000239;gene_name=CD99P1;ID=HG002_chrY_T0000239;Name=CD99P1
HG002_chrY	CAT	exon	2286175	2286270	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000239;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000239;transcript_name=HG002_chrY_T0000239;gene_name=CD99P1;ID=exon:HG002_chrY_T0000239:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000239;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000239;transcript_name=HG002_chrY_T0000239;gene_name=CD99P1;ID=intron:HG002_chrY_T0000239:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000239;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000239;transcript_name=HG002_chrY_T0000239;gene_name=CD99P1;ID=exon:HG002_chrY_T0000239:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000239;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000239;transcript_name=HG002_chrY_T0000239;gene_name=CD99P1;ID=intron:HG002_chrY_T0000239:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000239;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000239;transcript_name=HG002_chrY_T0000239;gene_name=CD99P1;ID=exon:HG002_chrY_T0000239:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000239;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000239;transcript_name=HG002_chrY_T0000239;gene_name=CD99P1;ID=intron:HG002_chrY_T0000239:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000239;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000239;transcript_name=HG002_chrY_T0000239;gene_name=CD99P1;ID=exon:HG002_chrY_T0000239:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295522	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000239;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000239;transcript_name=HG002_chrY_T0000239;gene_name=CD99P1;ID=intron:HG002_chrY_T0000239:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295523	2295549	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000239;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000239;transcript_name=HG002_chrY_T0000239;gene_name=CD99P1;ID=exon:HG002_chrY_T0000239:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000239;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000239;transcript_name=HG002_chrY_T0000239;gene_name=CD99P1;ID=intron:HG002_chrY_T0000239:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000239;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000239;transcript_name=HG002_chrY_T0000239;gene_name=CD99P1;ID=exon:HG002_chrY_T0000239:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2300151	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000239;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000239;transcript_name=HG002_chrY_T0000239;gene_name=CD99P1;ID=intron:HG002_chrY_T0000239:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000239;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000239;transcript_name=HG002_chrY_T0000239;gene_name=CD99P1;ID=exon:HG002_chrY_T0000239:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000239;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000239;transcript_name=HG002_chrY_T0000239;gene_name=CD99P1;ID=intron:HG002_chrY_T0000239:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000239;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000239;transcript_name=HG002_chrY_T0000239;gene_name=CD99P1;ID=exon:HG002_chrY_T0000239:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2315026	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000239;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000239;transcript_name=HG002_chrY_T0000239;gene_name=CD99P1;ID=intron:HG002_chrY_T0000239:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315382	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000239;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000239;transcript_name=HG002_chrY_T0000239;gene_name=CD99P1;ID=exon:HG002_chrY_T0000239:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286177	2315386	1000	+	.	source_transcript=ENST00000850769.1;source_transcript_name=CD99P1-281;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850769.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000240;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000240;gene_name=CD99P1;ID=HG002_chrY_T0000240;Name=CD99P1
HG002_chrY	CAT	exon	2286177	2286270	.	+	.	source_transcript=ENST00000850769.1;source_transcript_name=CD99P1-281;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850769.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000240;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000240;transcript_name=HG002_chrY_T0000240;gene_name=CD99P1;ID=exon:HG002_chrY_T0000240:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2315026	.	+	.	source_transcript=ENST00000850769.1;source_transcript_name=CD99P1-281;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850769.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000240;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000240;transcript_name=HG002_chrY_T0000240;gene_name=CD99P1;ID=intron:HG002_chrY_T0000240:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315386	.	+	.	source_transcript=ENST00000850769.1;source_transcript_name=CD99P1-281;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850769.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000240;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000240;transcript_name=HG002_chrY_T0000240;gene_name=CD99P1;ID=exon:HG002_chrY_T0000240:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286182	2335978	1000	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000241;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000241;gene_name=CD99P1;ID=HG002_chrY_T0000241;Name=CD99P1
HG002_chrY	CAT	exon	2286182	2286270	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000241;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000241;transcript_name=HG002_chrY_T0000241;gene_name=CD99P1;ID=exon:HG002_chrY_T0000241:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000241;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000241;transcript_name=HG002_chrY_T0000241;gene_name=CD99P1;ID=intron:HG002_chrY_T0000241:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000241;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000241;transcript_name=HG002_chrY_T0000241;gene_name=CD99P1;ID=exon:HG002_chrY_T0000241:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000241;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000241;transcript_name=HG002_chrY_T0000241;gene_name=CD99P1;ID=intron:HG002_chrY_T0000241:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000241;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000241;transcript_name=HG002_chrY_T0000241;gene_name=CD99P1;ID=exon:HG002_chrY_T0000241:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000241;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000241;transcript_name=HG002_chrY_T0000241;gene_name=CD99P1;ID=intron:HG002_chrY_T0000241:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000241;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000241;transcript_name=HG002_chrY_T0000241;gene_name=CD99P1;ID=exon:HG002_chrY_T0000241:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295504	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000241;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000241;transcript_name=HG002_chrY_T0000241;gene_name=CD99P1;ID=intron:HG002_chrY_T0000241:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000241;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000241;transcript_name=HG002_chrY_T0000241;gene_name=CD99P1;ID=exon:HG002_chrY_T0000241:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000241;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000241;transcript_name=HG002_chrY_T0000241;gene_name=CD99P1;ID=intron:HG002_chrY_T0000241:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000241;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000241;transcript_name=HG002_chrY_T0000241;gene_name=CD99P1;ID=exon:HG002_chrY_T0000241:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2300151	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000241;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000241;transcript_name=HG002_chrY_T0000241;gene_name=CD99P1;ID=intron:HG002_chrY_T0000241:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000241;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000241;transcript_name=HG002_chrY_T0000241;gene_name=CD99P1;ID=exon:HG002_chrY_T0000241:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000241;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000241;transcript_name=HG002_chrY_T0000241;gene_name=CD99P1;ID=intron:HG002_chrY_T0000241:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000241;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000241;transcript_name=HG002_chrY_T0000241;gene_name=CD99P1;ID=exon:HG002_chrY_T0000241:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2335509	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000241;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000241;transcript_name=HG002_chrY_T0000241;gene_name=CD99P1;ID=intron:HG002_chrY_T0000241:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2335510	2335978	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000241;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000241;transcript_name=HG002_chrY_T0000241;gene_name=CD99P1;ID=exon:HG002_chrY_T0000241:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286182	2335978	1000	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000242;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000242;gene_name=CD99P1;ID=HG002_chrY_T0000242;Name=CD99P1
HG002_chrY	CAT	exon	2286182	2286270	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000242;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000242;transcript_name=HG002_chrY_T0000242;gene_name=CD99P1;ID=exon:HG002_chrY_T0000242:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000242;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000242;transcript_name=HG002_chrY_T0000242;gene_name=CD99P1;ID=intron:HG002_chrY_T0000242:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000242;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000242;transcript_name=HG002_chrY_T0000242;gene_name=CD99P1;ID=exon:HG002_chrY_T0000242:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000242;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000242;transcript_name=HG002_chrY_T0000242;gene_name=CD99P1;ID=intron:HG002_chrY_T0000242:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000242;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000242;transcript_name=HG002_chrY_T0000242;gene_name=CD99P1;ID=exon:HG002_chrY_T0000242:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000242;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000242;transcript_name=HG002_chrY_T0000242;gene_name=CD99P1;ID=intron:HG002_chrY_T0000242:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000242;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000242;transcript_name=HG002_chrY_T0000242;gene_name=CD99P1;ID=exon:HG002_chrY_T0000242:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295504	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000242;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000242;transcript_name=HG002_chrY_T0000242;gene_name=CD99P1;ID=intron:HG002_chrY_T0000242:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000242;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000242;transcript_name=HG002_chrY_T0000242;gene_name=CD99P1;ID=exon:HG002_chrY_T0000242:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000242;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000242;transcript_name=HG002_chrY_T0000242;gene_name=CD99P1;ID=intron:HG002_chrY_T0000242:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000242;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000242;transcript_name=HG002_chrY_T0000242;gene_name=CD99P1;ID=exon:HG002_chrY_T0000242:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2299456	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000242;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000242;transcript_name=HG002_chrY_T0000242;gene_name=CD99P1;ID=intron:HG002_chrY_T0000242:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2299457	2299501	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000242;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000242;transcript_name=HG002_chrY_T0000242;gene_name=CD99P1;ID=exon:HG002_chrY_T0000242:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2299502	2300151	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000242;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000242;transcript_name=HG002_chrY_T0000242;gene_name=CD99P1;ID=intron:HG002_chrY_T0000242:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000242;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000242;transcript_name=HG002_chrY_T0000242;gene_name=CD99P1;ID=exon:HG002_chrY_T0000242:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000242;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000242;transcript_name=HG002_chrY_T0000242;gene_name=CD99P1;ID=intron:HG002_chrY_T0000242:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000242;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000242;transcript_name=HG002_chrY_T0000242;gene_name=CD99P1;ID=exon:HG002_chrY_T0000242:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2335528	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000242;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000242;transcript_name=HG002_chrY_T0000242;gene_name=CD99P1;ID=intron:HG002_chrY_T0000242:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2335529	2335978	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000242;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000242;transcript_name=HG002_chrY_T0000242;gene_name=CD99P1;ID=exon:HG002_chrY_T0000242:9;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286182	2295818	1000	+	.	source_transcript=ENST00000850794.1;source_transcript_name=CD99P1-306;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850794.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000243;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000243;gene_name=CD99P1;ID=HG002_chrY_T0000243;Name=CD99P1
HG002_chrY	CAT	exon	2286182	2286270	.	+	.	source_transcript=ENST00000850794.1;source_transcript_name=CD99P1-306;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000243;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000243;transcript_name=HG002_chrY_T0000243;gene_name=CD99P1;ID=exon:HG002_chrY_T0000243:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2292581	.	+	.	source_transcript=ENST00000850794.1;source_transcript_name=CD99P1-306;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000243;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000243;transcript_name=HG002_chrY_T0000243;gene_name=CD99P1;ID=intron:HG002_chrY_T0000243:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850794.1;source_transcript_name=CD99P1-306;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000243;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000243;transcript_name=HG002_chrY_T0000243;gene_name=CD99P1;ID=exon:HG002_chrY_T0000243:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295504	.	+	.	source_transcript=ENST00000850794.1;source_transcript_name=CD99P1-306;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000243;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000243;transcript_name=HG002_chrY_T0000243;gene_name=CD99P1;ID=intron:HG002_chrY_T0000243:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295818	.	+	.	source_transcript=ENST00000850794.1;source_transcript_name=CD99P1-306;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000243;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000243;transcript_name=HG002_chrY_T0000243;gene_name=CD99P1;ID=exon:HG002_chrY_T0000243:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286182	2335977	1000	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000244;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000244;gene_name=CD99P1;ID=HG002_chrY_T0000244;Name=CD99P1
HG002_chrY	CAT	exon	2286182	2286270	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000244;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000244;transcript_name=HG002_chrY_T0000244;gene_name=CD99P1;ID=exon:HG002_chrY_T0000244:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000244;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000244;transcript_name=HG002_chrY_T0000244;gene_name=CD99P1;ID=intron:HG002_chrY_T0000244:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000244;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000244;transcript_name=HG002_chrY_T0000244;gene_name=CD99P1;ID=exon:HG002_chrY_T0000244:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000244;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000244;transcript_name=HG002_chrY_T0000244;gene_name=CD99P1;ID=intron:HG002_chrY_T0000244:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000244;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000244;transcript_name=HG002_chrY_T0000244;gene_name=CD99P1;ID=exon:HG002_chrY_T0000244:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000244;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000244;transcript_name=HG002_chrY_T0000244;gene_name=CD99P1;ID=intron:HG002_chrY_T0000244:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000244;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000244;transcript_name=HG002_chrY_T0000244;gene_name=CD99P1;ID=exon:HG002_chrY_T0000244:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295504	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000244;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000244;transcript_name=HG002_chrY_T0000244;gene_name=CD99P1;ID=intron:HG002_chrY_T0000244:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000244;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000244;transcript_name=HG002_chrY_T0000244;gene_name=CD99P1;ID=exon:HG002_chrY_T0000244:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000244;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000244;transcript_name=HG002_chrY_T0000244;gene_name=CD99P1;ID=intron:HG002_chrY_T0000244:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000244;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000244;transcript_name=HG002_chrY_T0000244;gene_name=CD99P1;ID=exon:HG002_chrY_T0000244:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2299456	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000244;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000244;transcript_name=HG002_chrY_T0000244;gene_name=CD99P1;ID=intron:HG002_chrY_T0000244:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2299457	2299501	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000244;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000244;transcript_name=HG002_chrY_T0000244;gene_name=CD99P1;ID=exon:HG002_chrY_T0000244:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2299502	2300151	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000244;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000244;transcript_name=HG002_chrY_T0000244;gene_name=CD99P1;ID=intron:HG002_chrY_T0000244:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000244;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000244;transcript_name=HG002_chrY_T0000244;gene_name=CD99P1;ID=exon:HG002_chrY_T0000244:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000244;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000244;transcript_name=HG002_chrY_T0000244;gene_name=CD99P1;ID=intron:HG002_chrY_T0000244:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000244;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000244;transcript_name=HG002_chrY_T0000244;gene_name=CD99P1;ID=exon:HG002_chrY_T0000244:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2335509	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000244;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000244;transcript_name=HG002_chrY_T0000244;gene_name=CD99P1;ID=intron:HG002_chrY_T0000244:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2335510	2335977	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000244;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000244;transcript_name=HG002_chrY_T0000244;gene_name=CD99P1;ID=exon:HG002_chrY_T0000244:9;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286182	2336010	1000	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000245;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000245;gene_name=CD99P1;ID=HG002_chrY_T0000245;Name=CD99P1
HG002_chrY	CAT	exon	2286182	2286270	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000245;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000245;transcript_name=HG002_chrY_T0000245;gene_name=CD99P1;ID=exon:HG002_chrY_T0000245:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000245;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000245;transcript_name=HG002_chrY_T0000245;gene_name=CD99P1;ID=intron:HG002_chrY_T0000245:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000245;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000245;transcript_name=HG002_chrY_T0000245;gene_name=CD99P1;ID=exon:HG002_chrY_T0000245:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000245;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000245;transcript_name=HG002_chrY_T0000245;gene_name=CD99P1;ID=intron:HG002_chrY_T0000245:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000245;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000245;transcript_name=HG002_chrY_T0000245;gene_name=CD99P1;ID=exon:HG002_chrY_T0000245:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000245;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000245;transcript_name=HG002_chrY_T0000245;gene_name=CD99P1;ID=intron:HG002_chrY_T0000245:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000245;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000245;transcript_name=HG002_chrY_T0000245;gene_name=CD99P1;ID=exon:HG002_chrY_T0000245:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295504	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000245;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000245;transcript_name=HG002_chrY_T0000245;gene_name=CD99P1;ID=intron:HG002_chrY_T0000245:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000245;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000245;transcript_name=HG002_chrY_T0000245;gene_name=CD99P1;ID=exon:HG002_chrY_T0000245:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000245;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000245;transcript_name=HG002_chrY_T0000245;gene_name=CD99P1;ID=intron:HG002_chrY_T0000245:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000245;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000245;transcript_name=HG002_chrY_T0000245;gene_name=CD99P1;ID=exon:HG002_chrY_T0000245:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2299456	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000245;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000245;transcript_name=HG002_chrY_T0000245;gene_name=CD99P1;ID=intron:HG002_chrY_T0000245:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2299457	2299501	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000245;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000245;transcript_name=HG002_chrY_T0000245;gene_name=CD99P1;ID=exon:HG002_chrY_T0000245:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2299502	2300151	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000245;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000245;transcript_name=HG002_chrY_T0000245;gene_name=CD99P1;ID=intron:HG002_chrY_T0000245:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000245;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000245;transcript_name=HG002_chrY_T0000245;gene_name=CD99P1;ID=exon:HG002_chrY_T0000245:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000245;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000245;transcript_name=HG002_chrY_T0000245;gene_name=CD99P1;ID=intron:HG002_chrY_T0000245:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000245;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000245;transcript_name=HG002_chrY_T0000245;gene_name=CD99P1;ID=exon:HG002_chrY_T0000245:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2335568	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000245;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000245;transcript_name=HG002_chrY_T0000245;gene_name=CD99P1;ID=intron:HG002_chrY_T0000245:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2335569	2336010	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000245;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000245;transcript_name=HG002_chrY_T0000245;gene_name=CD99P1;ID=exon:HG002_chrY_T0000245:9;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286182	2343462	1000	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000246;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000246;gene_name=CD99P1;ID=HG002_chrY_T0000246;Name=CD99P1
HG002_chrY	CAT	exon	2286182	2286270	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000246;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000246;transcript_name=HG002_chrY_T0000246;gene_name=CD99P1;ID=exon:HG002_chrY_T0000246:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000246;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000246;transcript_name=HG002_chrY_T0000246;gene_name=CD99P1;ID=intron:HG002_chrY_T0000246:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000246;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000246;transcript_name=HG002_chrY_T0000246;gene_name=CD99P1;ID=exon:HG002_chrY_T0000246:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000246;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000246;transcript_name=HG002_chrY_T0000246;gene_name=CD99P1;ID=intron:HG002_chrY_T0000246:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000246;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000246;transcript_name=HG002_chrY_T0000246;gene_name=CD99P1;ID=exon:HG002_chrY_T0000246:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000246;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000246;transcript_name=HG002_chrY_T0000246;gene_name=CD99P1;ID=intron:HG002_chrY_T0000246:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000246;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000246;transcript_name=HG002_chrY_T0000246;gene_name=CD99P1;ID=exon:HG002_chrY_T0000246:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295504	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000246;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000246;transcript_name=HG002_chrY_T0000246;gene_name=CD99P1;ID=intron:HG002_chrY_T0000246:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000246;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000246;transcript_name=HG002_chrY_T0000246;gene_name=CD99P1;ID=exon:HG002_chrY_T0000246:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000246;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000246;transcript_name=HG002_chrY_T0000246;gene_name=CD99P1;ID=intron:HG002_chrY_T0000246:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000246;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000246;transcript_name=HG002_chrY_T0000246;gene_name=CD99P1;ID=exon:HG002_chrY_T0000246:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2300151	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000246;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000246;transcript_name=HG002_chrY_T0000246;gene_name=CD99P1;ID=intron:HG002_chrY_T0000246:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000246;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000246;transcript_name=HG002_chrY_T0000246;gene_name=CD99P1;ID=exon:HG002_chrY_T0000246:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000246;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000246;transcript_name=HG002_chrY_T0000246;gene_name=CD99P1;ID=intron:HG002_chrY_T0000246:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000246;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000246;transcript_name=HG002_chrY_T0000246;gene_name=CD99P1;ID=exon:HG002_chrY_T0000246:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2342941	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000246;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000246;transcript_name=HG002_chrY_T0000246;gene_name=CD99P1;ID=intron:HG002_chrY_T0000246:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2342942	2343462	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000246;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000246;transcript_name=HG002_chrY_T0000246;gene_name=CD99P1;ID=exon:HG002_chrY_T0000246:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286182	2304082	1000	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000247;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000247;gene_name=CD99P1;ID=HG002_chrY_T0000247;Name=CD99P1
HG002_chrY	CAT	exon	2286182	2286270	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000247;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000247;transcript_name=HG002_chrY_T0000247;gene_name=CD99P1;ID=exon:HG002_chrY_T0000247:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000247;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000247;transcript_name=HG002_chrY_T0000247;gene_name=CD99P1;ID=intron:HG002_chrY_T0000247:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000247;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000247;transcript_name=HG002_chrY_T0000247;gene_name=CD99P1;ID=exon:HG002_chrY_T0000247:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000247;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000247;transcript_name=HG002_chrY_T0000247;gene_name=CD99P1;ID=intron:HG002_chrY_T0000247:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000247;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000247;transcript_name=HG002_chrY_T0000247;gene_name=CD99P1;ID=exon:HG002_chrY_T0000247:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000247;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000247;transcript_name=HG002_chrY_T0000247;gene_name=CD99P1;ID=intron:HG002_chrY_T0000247:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000247;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000247;transcript_name=HG002_chrY_T0000247;gene_name=CD99P1;ID=exon:HG002_chrY_T0000247:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295504	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000247;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000247;transcript_name=HG002_chrY_T0000247;gene_name=CD99P1;ID=intron:HG002_chrY_T0000247:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000247;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000247;transcript_name=HG002_chrY_T0000247;gene_name=CD99P1;ID=exon:HG002_chrY_T0000247:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000247;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000247;transcript_name=HG002_chrY_T0000247;gene_name=CD99P1;ID=intron:HG002_chrY_T0000247:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000247;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000247;transcript_name=HG002_chrY_T0000247;gene_name=CD99P1;ID=exon:HG002_chrY_T0000247:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2300151	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000247;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000247;transcript_name=HG002_chrY_T0000247;gene_name=CD99P1;ID=intron:HG002_chrY_T0000247:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000247;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000247;transcript_name=HG002_chrY_T0000247;gene_name=CD99P1;ID=exon:HG002_chrY_T0000247:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000247;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000247;transcript_name=HG002_chrY_T0000247;gene_name=CD99P1;ID=intron:HG002_chrY_T0000247:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2304082	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000247;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000247;transcript_name=HG002_chrY_T0000247;gene_name=CD99P1;ID=exon:HG002_chrY_T0000247:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286182	2325210	1000	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000248;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000248;gene_name=CD99P1;ID=HG002_chrY_T0000248;Name=CD99P1
HG002_chrY	CAT	exon	2286182	2286270	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000248;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000248;transcript_name=HG002_chrY_T0000248;gene_name=CD99P1;ID=exon:HG002_chrY_T0000248:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000248;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000248;transcript_name=HG002_chrY_T0000248;gene_name=CD99P1;ID=intron:HG002_chrY_T0000248:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000248;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000248;transcript_name=HG002_chrY_T0000248;gene_name=CD99P1;ID=exon:HG002_chrY_T0000248:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000248;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000248;transcript_name=HG002_chrY_T0000248;gene_name=CD99P1;ID=intron:HG002_chrY_T0000248:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000248;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000248;transcript_name=HG002_chrY_T0000248;gene_name=CD99P1;ID=exon:HG002_chrY_T0000248:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000248;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000248;transcript_name=HG002_chrY_T0000248;gene_name=CD99P1;ID=intron:HG002_chrY_T0000248:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000248;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000248;transcript_name=HG002_chrY_T0000248;gene_name=CD99P1;ID=exon:HG002_chrY_T0000248:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295504	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000248;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000248;transcript_name=HG002_chrY_T0000248;gene_name=CD99P1;ID=intron:HG002_chrY_T0000248:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000248;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000248;transcript_name=HG002_chrY_T0000248;gene_name=CD99P1;ID=exon:HG002_chrY_T0000248:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000248;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000248;transcript_name=HG002_chrY_T0000248;gene_name=CD99P1;ID=intron:HG002_chrY_T0000248:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000248;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000248;transcript_name=HG002_chrY_T0000248;gene_name=CD99P1;ID=exon:HG002_chrY_T0000248:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2300151	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000248;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000248;transcript_name=HG002_chrY_T0000248;gene_name=CD99P1;ID=intron:HG002_chrY_T0000248:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000248;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000248;transcript_name=HG002_chrY_T0000248;gene_name=CD99P1;ID=exon:HG002_chrY_T0000248:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000248;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000248;transcript_name=HG002_chrY_T0000248;gene_name=CD99P1;ID=intron:HG002_chrY_T0000248:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000248;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000248;transcript_name=HG002_chrY_T0000248;gene_name=CD99P1;ID=exon:HG002_chrY_T0000248:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2324564	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000248;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000248;transcript_name=HG002_chrY_T0000248;gene_name=CD99P1;ID=intron:HG002_chrY_T0000248:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2324565	2325210	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000248;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000248;transcript_name=HG002_chrY_T0000248;gene_name=CD99P1;ID=exon:HG002_chrY_T0000248:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286182	2336009	1000	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000249;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000249;gene_name=CD99P1;ID=HG002_chrY_T0000249;Name=CD99P1
HG002_chrY	CAT	exon	2286182	2286270	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000249;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000249;transcript_name=HG002_chrY_T0000249;gene_name=CD99P1;ID=exon:HG002_chrY_T0000249:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000249;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000249;transcript_name=HG002_chrY_T0000249;gene_name=CD99P1;ID=intron:HG002_chrY_T0000249:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000249;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000249;transcript_name=HG002_chrY_T0000249;gene_name=CD99P1;ID=exon:HG002_chrY_T0000249:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000249;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000249;transcript_name=HG002_chrY_T0000249;gene_name=CD99P1;ID=intron:HG002_chrY_T0000249:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000249;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000249;transcript_name=HG002_chrY_T0000249;gene_name=CD99P1;ID=exon:HG002_chrY_T0000249:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2295504	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000249;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000249;transcript_name=HG002_chrY_T0000249;gene_name=CD99P1;ID=intron:HG002_chrY_T0000249:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000249;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000249;transcript_name=HG002_chrY_T0000249;gene_name=CD99P1;ID=exon:HG002_chrY_T0000249:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000249;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000249;transcript_name=HG002_chrY_T0000249;gene_name=CD99P1;ID=intron:HG002_chrY_T0000249:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000249;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000249;transcript_name=HG002_chrY_T0000249;gene_name=CD99P1;ID=exon:HG002_chrY_T0000249:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2299456	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000249;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000249;transcript_name=HG002_chrY_T0000249;gene_name=CD99P1;ID=intron:HG002_chrY_T0000249:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2299457	2299501	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000249;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000249;transcript_name=HG002_chrY_T0000249;gene_name=CD99P1;ID=exon:HG002_chrY_T0000249:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2299502	2300151	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000249;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000249;transcript_name=HG002_chrY_T0000249;gene_name=CD99P1;ID=intron:HG002_chrY_T0000249:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000249;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000249;transcript_name=HG002_chrY_T0000249;gene_name=CD99P1;ID=exon:HG002_chrY_T0000249:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000249;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000249;transcript_name=HG002_chrY_T0000249;gene_name=CD99P1;ID=intron:HG002_chrY_T0000249:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000249;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000249;transcript_name=HG002_chrY_T0000249;gene_name=CD99P1;ID=exon:HG002_chrY_T0000249:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2335568	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000249;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000249;transcript_name=HG002_chrY_T0000249;gene_name=CD99P1;ID=intron:HG002_chrY_T0000249:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2335569	2336009	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000249;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000249;transcript_name=HG002_chrY_T0000249;gene_name=CD99P1;ID=exon:HG002_chrY_T0000249:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286187	2335097	1000	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000250;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000250;gene_name=CD99P1;ID=HG002_chrY_T0000250;Name=CD99P1
HG002_chrY	CAT	exon	2286187	2286270	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000250;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000250;transcript_name=HG002_chrY_T0000250;gene_name=CD99P1;ID=exon:HG002_chrY_T0000250:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000250;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000250;transcript_name=HG002_chrY_T0000250;gene_name=CD99P1;ID=intron:HG002_chrY_T0000250:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000250;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000250;transcript_name=HG002_chrY_T0000250;gene_name=CD99P1;ID=exon:HG002_chrY_T0000250:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000250;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000250;transcript_name=HG002_chrY_T0000250;gene_name=CD99P1;ID=intron:HG002_chrY_T0000250:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000250;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000250;transcript_name=HG002_chrY_T0000250;gene_name=CD99P1;ID=exon:HG002_chrY_T0000250:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000250;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000250;transcript_name=HG002_chrY_T0000250;gene_name=CD99P1;ID=intron:HG002_chrY_T0000250:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000250;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000250;transcript_name=HG002_chrY_T0000250;gene_name=CD99P1;ID=exon:HG002_chrY_T0000250:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295504	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000250;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000250;transcript_name=HG002_chrY_T0000250;gene_name=CD99P1;ID=intron:HG002_chrY_T0000250:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000250;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000250;transcript_name=HG002_chrY_T0000250;gene_name=CD99P1;ID=exon:HG002_chrY_T0000250:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000250;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000250;transcript_name=HG002_chrY_T0000250;gene_name=CD99P1;ID=intron:HG002_chrY_T0000250:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000250;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000250;transcript_name=HG002_chrY_T0000250;gene_name=CD99P1;ID=exon:HG002_chrY_T0000250:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2299456	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000250;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000250;transcript_name=HG002_chrY_T0000250;gene_name=CD99P1;ID=intron:HG002_chrY_T0000250:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2299457	2299501	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000250;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000250;transcript_name=HG002_chrY_T0000250;gene_name=CD99P1;ID=exon:HG002_chrY_T0000250:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2299502	2300151	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000250;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000250;transcript_name=HG002_chrY_T0000250;gene_name=CD99P1;ID=intron:HG002_chrY_T0000250:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000250;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000250;transcript_name=HG002_chrY_T0000250;gene_name=CD99P1;ID=exon:HG002_chrY_T0000250:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000250;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000250;transcript_name=HG002_chrY_T0000250;gene_name=CD99P1;ID=intron:HG002_chrY_T0000250:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000250;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000250;transcript_name=HG002_chrY_T0000250;gene_name=CD99P1;ID=exon:HG002_chrY_T0000250:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2334946	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000250;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000250;transcript_name=HG002_chrY_T0000250;gene_name=CD99P1;ID=intron:HG002_chrY_T0000250:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2334947	2335097	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000250;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000250;transcript_name=HG002_chrY_T0000250;gene_name=CD99P1;ID=exon:HG002_chrY_T0000250:9;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286190	2315384	1000	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000251;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000251;gene_name=CD99P1;ID=HG002_chrY_T0000251;Name=CD99P1
HG002_chrY	CAT	exon	2286190	2286270	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000251;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000251;transcript_name=HG002_chrY_T0000251;gene_name=CD99P1;ID=exon:HG002_chrY_T0000251:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000251;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000251;transcript_name=HG002_chrY_T0000251;gene_name=CD99P1;ID=intron:HG002_chrY_T0000251:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000251;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000251;transcript_name=HG002_chrY_T0000251;gene_name=CD99P1;ID=exon:HG002_chrY_T0000251:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000251;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000251;transcript_name=HG002_chrY_T0000251;gene_name=CD99P1;ID=intron:HG002_chrY_T0000251:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000251;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000251;transcript_name=HG002_chrY_T0000251;gene_name=CD99P1;ID=exon:HG002_chrY_T0000251:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000251;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000251;transcript_name=HG002_chrY_T0000251;gene_name=CD99P1;ID=intron:HG002_chrY_T0000251:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000251;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000251;transcript_name=HG002_chrY_T0000251;gene_name=CD99P1;ID=exon:HG002_chrY_T0000251:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295504	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000251;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000251;transcript_name=HG002_chrY_T0000251;gene_name=CD99P1;ID=intron:HG002_chrY_T0000251:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000251;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000251;transcript_name=HG002_chrY_T0000251;gene_name=CD99P1;ID=exon:HG002_chrY_T0000251:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000251;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000251;transcript_name=HG002_chrY_T0000251;gene_name=CD99P1;ID=intron:HG002_chrY_T0000251:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000251;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000251;transcript_name=HG002_chrY_T0000251;gene_name=CD99P1;ID=exon:HG002_chrY_T0000251:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2300115	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000251;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000251;transcript_name=HG002_chrY_T0000251;gene_name=CD99P1;ID=intron:HG002_chrY_T0000251:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300116	2300220	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000251;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000251;transcript_name=HG002_chrY_T0000251;gene_name=CD99P1;ID=exon:HG002_chrY_T0000251:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000251;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000251;transcript_name=HG002_chrY_T0000251;gene_name=CD99P1;ID=intron:HG002_chrY_T0000251:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000251;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000251;transcript_name=HG002_chrY_T0000251;gene_name=CD99P1;ID=exon:HG002_chrY_T0000251:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2315026	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000251;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000251;transcript_name=HG002_chrY_T0000251;gene_name=CD99P1;ID=intron:HG002_chrY_T0000251:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315384	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000251;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000251;transcript_name=HG002_chrY_T0000251;gene_name=CD99P1;ID=exon:HG002_chrY_T0000251:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286190	2315382	1000	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000252;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000252;gene_name=CD99P1;ID=HG002_chrY_T0000252;Name=CD99P1
HG002_chrY	CAT	exon	2286190	2286270	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000252;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000252;transcript_name=HG002_chrY_T0000252;gene_name=CD99P1;ID=exon:HG002_chrY_T0000252:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000252;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000252;transcript_name=HG002_chrY_T0000252;gene_name=CD99P1;ID=intron:HG002_chrY_T0000252:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000252;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000252;transcript_name=HG002_chrY_T0000252;gene_name=CD99P1;ID=exon:HG002_chrY_T0000252:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2295504	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000252;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000252;transcript_name=HG002_chrY_T0000252;gene_name=CD99P1;ID=intron:HG002_chrY_T0000252:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000252;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000252;transcript_name=HG002_chrY_T0000252;gene_name=CD99P1;ID=exon:HG002_chrY_T0000252:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000252;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000252;transcript_name=HG002_chrY_T0000252;gene_name=CD99P1;ID=intron:HG002_chrY_T0000252:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000252;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000252;transcript_name=HG002_chrY_T0000252;gene_name=CD99P1;ID=exon:HG002_chrY_T0000252:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2300151	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000252;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000252;transcript_name=HG002_chrY_T0000252;gene_name=CD99P1;ID=intron:HG002_chrY_T0000252:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000252;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000252;transcript_name=HG002_chrY_T0000252;gene_name=CD99P1;ID=exon:HG002_chrY_T0000252:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000252;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000252;transcript_name=HG002_chrY_T0000252;gene_name=CD99P1;ID=intron:HG002_chrY_T0000252:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000252;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000252;transcript_name=HG002_chrY_T0000252;gene_name=CD99P1;ID=exon:HG002_chrY_T0000252:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2315026	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000252;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000252;transcript_name=HG002_chrY_T0000252;gene_name=CD99P1;ID=intron:HG002_chrY_T0000252:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315382	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000252;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000252;transcript_name=HG002_chrY_T0000252;gene_name=CD99P1;ID=exon:HG002_chrY_T0000252:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286192	2315382	1000	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000253;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000253;gene_name=CD99P1;ID=HG002_chrY_T0000253;Name=CD99P1
HG002_chrY	CAT	exon	2286192	2286270	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000253;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000253;transcript_name=HG002_chrY_T0000253;gene_name=CD99P1;ID=exon:HG002_chrY_T0000253:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000253;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000253;transcript_name=HG002_chrY_T0000253;gene_name=CD99P1;ID=intron:HG002_chrY_T0000253:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000253;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000253;transcript_name=HG002_chrY_T0000253;gene_name=CD99P1;ID=exon:HG002_chrY_T0000253:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000253;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000253;transcript_name=HG002_chrY_T0000253;gene_name=CD99P1;ID=intron:HG002_chrY_T0000253:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000253;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000253;transcript_name=HG002_chrY_T0000253;gene_name=CD99P1;ID=exon:HG002_chrY_T0000253:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2295504	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000253;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000253;transcript_name=HG002_chrY_T0000253;gene_name=CD99P1;ID=intron:HG002_chrY_T0000253:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000253;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000253;transcript_name=HG002_chrY_T0000253;gene_name=CD99P1;ID=exon:HG002_chrY_T0000253:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000253;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000253;transcript_name=HG002_chrY_T0000253;gene_name=CD99P1;ID=intron:HG002_chrY_T0000253:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000253;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000253;transcript_name=HG002_chrY_T0000253;gene_name=CD99P1;ID=exon:HG002_chrY_T0000253:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2300115	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000253;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000253;transcript_name=HG002_chrY_T0000253;gene_name=CD99P1;ID=intron:HG002_chrY_T0000253:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300116	2300220	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000253;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000253;transcript_name=HG002_chrY_T0000253;gene_name=CD99P1;ID=exon:HG002_chrY_T0000253:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000253;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000253;transcript_name=HG002_chrY_T0000253;gene_name=CD99P1;ID=intron:HG002_chrY_T0000253:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000253;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000253;transcript_name=HG002_chrY_T0000253;gene_name=CD99P1;ID=exon:HG002_chrY_T0000253:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2315026	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000253;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000253;transcript_name=HG002_chrY_T0000253;gene_name=CD99P1;ID=intron:HG002_chrY_T0000253:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315382	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000253;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000253;transcript_name=HG002_chrY_T0000253;gene_name=CD99P1;ID=exon:HG002_chrY_T0000253:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286192	2315382	1000	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000254;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000254;gene_name=CD99P1;ID=HG002_chrY_T0000254;Name=CD99P1
HG002_chrY	CAT	exon	2286192	2286270	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000254;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000254;transcript_name=HG002_chrY_T0000254;gene_name=CD99P1;ID=exon:HG002_chrY_T0000254:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000254;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000254;transcript_name=HG002_chrY_T0000254;gene_name=CD99P1;ID=intron:HG002_chrY_T0000254:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000254;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000254;transcript_name=HG002_chrY_T0000254;gene_name=CD99P1;ID=exon:HG002_chrY_T0000254:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000254;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000254;transcript_name=HG002_chrY_T0000254;gene_name=CD99P1;ID=intron:HG002_chrY_T0000254:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000254;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000254;transcript_name=HG002_chrY_T0000254;gene_name=CD99P1;ID=exon:HG002_chrY_T0000254:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2303368	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000254;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000254;transcript_name=HG002_chrY_T0000254;gene_name=CD99P1;ID=intron:HG002_chrY_T0000254:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000254;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000254;transcript_name=HG002_chrY_T0000254;gene_name=CD99P1;ID=exon:HG002_chrY_T0000254:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2315026	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000254;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000254;transcript_name=HG002_chrY_T0000254;gene_name=CD99P1;ID=intron:HG002_chrY_T0000254:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315382	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000254;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000254;transcript_name=HG002_chrY_T0000254;gene_name=CD99P1;ID=exon:HG002_chrY_T0000254:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286192	2315382	1000	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000255;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000255;gene_name=CD99P1;ID=HG002_chrY_T0000255;Name=CD99P1
HG002_chrY	CAT	exon	2286192	2286270	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000255;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000255;transcript_name=HG002_chrY_T0000255;gene_name=CD99P1;ID=exon:HG002_chrY_T0000255:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000255;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000255;transcript_name=HG002_chrY_T0000255;gene_name=CD99P1;ID=intron:HG002_chrY_T0000255:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000255;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000255;transcript_name=HG002_chrY_T0000255;gene_name=CD99P1;ID=exon:HG002_chrY_T0000255:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000255;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000255;transcript_name=HG002_chrY_T0000255;gene_name=CD99P1;ID=intron:HG002_chrY_T0000255:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000255;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000255;transcript_name=HG002_chrY_T0000255;gene_name=CD99P1;ID=exon:HG002_chrY_T0000255:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000255;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000255;transcript_name=HG002_chrY_T0000255;gene_name=CD99P1;ID=intron:HG002_chrY_T0000255:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000255;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000255;transcript_name=HG002_chrY_T0000255;gene_name=CD99P1;ID=exon:HG002_chrY_T0000255:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2315026	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000255;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000255;transcript_name=HG002_chrY_T0000255;gene_name=CD99P1;ID=intron:HG002_chrY_T0000255:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315382	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000255;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000255;transcript_name=HG002_chrY_T0000255;gene_name=CD99P1;ID=exon:HG002_chrY_T0000255:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286193	2334295	1000	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000256;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000256;gene_name=CD99P1;ID=HG002_chrY_T0000256;Name=CD99P1
HG002_chrY	CAT	exon	2286193	2286270	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000256;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000256;transcript_name=HG002_chrY_T0000256;gene_name=CD99P1;ID=exon:HG002_chrY_T0000256:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000256;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000256;transcript_name=HG002_chrY_T0000256;gene_name=CD99P1;ID=intron:HG002_chrY_T0000256:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000256;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000256;transcript_name=HG002_chrY_T0000256;gene_name=CD99P1;ID=exon:HG002_chrY_T0000256:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000256;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000256;transcript_name=HG002_chrY_T0000256;gene_name=CD99P1;ID=intron:HG002_chrY_T0000256:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000256;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000256;transcript_name=HG002_chrY_T0000256;gene_name=CD99P1;ID=exon:HG002_chrY_T0000256:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000256;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000256;transcript_name=HG002_chrY_T0000256;gene_name=CD99P1;ID=intron:HG002_chrY_T0000256:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000256;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000256;transcript_name=HG002_chrY_T0000256;gene_name=CD99P1;ID=exon:HG002_chrY_T0000256:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295504	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000256;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000256;transcript_name=HG002_chrY_T0000256;gene_name=CD99P1;ID=intron:HG002_chrY_T0000256:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000256;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000256;transcript_name=HG002_chrY_T0000256;gene_name=CD99P1;ID=exon:HG002_chrY_T0000256:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000256;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000256;transcript_name=HG002_chrY_T0000256;gene_name=CD99P1;ID=intron:HG002_chrY_T0000256:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000256;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000256;transcript_name=HG002_chrY_T0000256;gene_name=CD99P1;ID=exon:HG002_chrY_T0000256:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2300151	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000256;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000256;transcript_name=HG002_chrY_T0000256;gene_name=CD99P1;ID=intron:HG002_chrY_T0000256:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000256;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000256;transcript_name=HG002_chrY_T0000256;gene_name=CD99P1;ID=exon:HG002_chrY_T0000256:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000256;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000256;transcript_name=HG002_chrY_T0000256;gene_name=CD99P1;ID=intron:HG002_chrY_T0000256:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000256;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000256;transcript_name=HG002_chrY_T0000256;gene_name=CD99P1;ID=exon:HG002_chrY_T0000256:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2332092	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000256;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000256;transcript_name=HG002_chrY_T0000256;gene_name=CD99P1;ID=intron:HG002_chrY_T0000256:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2332093	2334295	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000256;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000256;transcript_name=HG002_chrY_T0000256;gene_name=CD99P1;ID=exon:HG002_chrY_T0000256:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286194	2315382	1000	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000257;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000257;gene_name=CD99P1;ID=HG002_chrY_T0000257;Name=CD99P1
HG002_chrY	CAT	exon	2286194	2286270	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000257;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000257;transcript_name=HG002_chrY_T0000257;gene_name=CD99P1;ID=exon:HG002_chrY_T0000257:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000257;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000257;transcript_name=HG002_chrY_T0000257;gene_name=CD99P1;ID=intron:HG002_chrY_T0000257:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000257;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000257;transcript_name=HG002_chrY_T0000257;gene_name=CD99P1;ID=exon:HG002_chrY_T0000257:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000257;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000257;transcript_name=HG002_chrY_T0000257;gene_name=CD99P1;ID=intron:HG002_chrY_T0000257:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000257;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000257;transcript_name=HG002_chrY_T0000257;gene_name=CD99P1;ID=exon:HG002_chrY_T0000257:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000257;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000257;transcript_name=HG002_chrY_T0000257;gene_name=CD99P1;ID=intron:HG002_chrY_T0000257:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000257;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000257;transcript_name=HG002_chrY_T0000257;gene_name=CD99P1;ID=exon:HG002_chrY_T0000257:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295297	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000257;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000257;transcript_name=HG002_chrY_T0000257;gene_name=CD99P1;ID=intron:HG002_chrY_T0000257:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295298	2295381	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000257;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000257;transcript_name=HG002_chrY_T0000257;gene_name=CD99P1;ID=exon:HG002_chrY_T0000257:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295382	2295504	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000257;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000257;transcript_name=HG002_chrY_T0000257;gene_name=CD99P1;ID=intron:HG002_chrY_T0000257:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000257;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000257;transcript_name=HG002_chrY_T0000257;gene_name=CD99P1;ID=exon:HG002_chrY_T0000257:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000257;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000257;transcript_name=HG002_chrY_T0000257;gene_name=CD99P1;ID=intron:HG002_chrY_T0000257:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000257;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000257;transcript_name=HG002_chrY_T0000257;gene_name=CD99P1;ID=exon:HG002_chrY_T0000257:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2300151	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000257;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000257;transcript_name=HG002_chrY_T0000257;gene_name=CD99P1;ID=intron:HG002_chrY_T0000257:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000257;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000257;transcript_name=HG002_chrY_T0000257;gene_name=CD99P1;ID=exon:HG002_chrY_T0000257:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000257;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000257;transcript_name=HG002_chrY_T0000257;gene_name=CD99P1;ID=intron:HG002_chrY_T0000257:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000257;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000257;transcript_name=HG002_chrY_T0000257;gene_name=CD99P1;ID=exon:HG002_chrY_T0000257:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2315026	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000257;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000257;transcript_name=HG002_chrY_T0000257;gene_name=CD99P1;ID=intron:HG002_chrY_T0000257:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315382	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000257;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000257;transcript_name=HG002_chrY_T0000257;gene_name=CD99P1;ID=exon:HG002_chrY_T0000257:9;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286195	2304055	1000	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000258;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000258;gene_name=CD99P1;ID=HG002_chrY_T0000258;Name=CD99P1
HG002_chrY	CAT	exon	2286195	2286270	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000258;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000258;transcript_name=HG002_chrY_T0000258;gene_name=CD99P1;ID=exon:HG002_chrY_T0000258:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000258;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000258;transcript_name=HG002_chrY_T0000258;gene_name=CD99P1;ID=intron:HG002_chrY_T0000258:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000258;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000258;transcript_name=HG002_chrY_T0000258;gene_name=CD99P1;ID=exon:HG002_chrY_T0000258:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000258;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000258;transcript_name=HG002_chrY_T0000258;gene_name=CD99P1;ID=intron:HG002_chrY_T0000258:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000258;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000258;transcript_name=HG002_chrY_T0000258;gene_name=CD99P1;ID=exon:HG002_chrY_T0000258:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000258;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000258;transcript_name=HG002_chrY_T0000258;gene_name=CD99P1;ID=intron:HG002_chrY_T0000258:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000258;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000258;transcript_name=HG002_chrY_T0000258;gene_name=CD99P1;ID=exon:HG002_chrY_T0000258:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2294242	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000258;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000258;transcript_name=HG002_chrY_T0000258;gene_name=CD99P1;ID=intron:HG002_chrY_T0000258:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2294243	2294352	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000258;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000258;transcript_name=HG002_chrY_T0000258;gene_name=CD99P1;ID=exon:HG002_chrY_T0000258:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2294353	2295504	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000258;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000258;transcript_name=HG002_chrY_T0000258;gene_name=CD99P1;ID=intron:HG002_chrY_T0000258:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000258;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000258;transcript_name=HG002_chrY_T0000258;gene_name=CD99P1;ID=exon:HG002_chrY_T0000258:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000258;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000258;transcript_name=HG002_chrY_T0000258;gene_name=CD99P1;ID=intron:HG002_chrY_T0000258:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000258;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000258;transcript_name=HG002_chrY_T0000258;gene_name=CD99P1;ID=exon:HG002_chrY_T0000258:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2300151	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000258;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000258;transcript_name=HG002_chrY_T0000258;gene_name=CD99P1;ID=intron:HG002_chrY_T0000258:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000258;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000258;transcript_name=HG002_chrY_T0000258;gene_name=CD99P1;ID=exon:HG002_chrY_T0000258:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000258;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000258;transcript_name=HG002_chrY_T0000258;gene_name=CD99P1;ID=intron:HG002_chrY_T0000258:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000258;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000258;transcript_name=HG002_chrY_T0000258;gene_name=CD99P1;ID=exon:HG002_chrY_T0000258:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2303875	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000258;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000258;transcript_name=HG002_chrY_T0000258;gene_name=CD99P1;ID=intron:HG002_chrY_T0000258:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303876	2304055	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000258;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000258;transcript_name=HG002_chrY_T0000258;gene_name=CD99P1;ID=exon:HG002_chrY_T0000258:9;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286195	2315380	1000	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000259;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000259;gene_name=CD99P1;ID=HG002_chrY_T0000259;Name=CD99P1
HG002_chrY	CAT	exon	2286195	2286270	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000259;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000259;transcript_name=HG002_chrY_T0000259;gene_name=CD99P1;ID=exon:HG002_chrY_T0000259:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000259;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000259;transcript_name=HG002_chrY_T0000259;gene_name=CD99P1;ID=intron:HG002_chrY_T0000259:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000259;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000259;transcript_name=HG002_chrY_T0000259;gene_name=CD99P1;ID=exon:HG002_chrY_T0000259:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000259;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000259;transcript_name=HG002_chrY_T0000259;gene_name=CD99P1;ID=intron:HG002_chrY_T0000259:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000259;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000259;transcript_name=HG002_chrY_T0000259;gene_name=CD99P1;ID=exon:HG002_chrY_T0000259:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000259;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000259;transcript_name=HG002_chrY_T0000259;gene_name=CD99P1;ID=intron:HG002_chrY_T0000259:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000259;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000259;transcript_name=HG002_chrY_T0000259;gene_name=CD99P1;ID=exon:HG002_chrY_T0000259:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295297	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000259;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000259;transcript_name=HG002_chrY_T0000259;gene_name=CD99P1;ID=intron:HG002_chrY_T0000259:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295298	2295381	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000259;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000259;transcript_name=HG002_chrY_T0000259;gene_name=CD99P1;ID=exon:HG002_chrY_T0000259:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295382	2295504	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000259;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000259;transcript_name=HG002_chrY_T0000259;gene_name=CD99P1;ID=intron:HG002_chrY_T0000259:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000259;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000259;transcript_name=HG002_chrY_T0000259;gene_name=CD99P1;ID=exon:HG002_chrY_T0000259:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000259;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000259;transcript_name=HG002_chrY_T0000259;gene_name=CD99P1;ID=intron:HG002_chrY_T0000259:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000259;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000259;transcript_name=HG002_chrY_T0000259;gene_name=CD99P1;ID=exon:HG002_chrY_T0000259:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2299456	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000259;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000259;transcript_name=HG002_chrY_T0000259;gene_name=CD99P1;ID=intron:HG002_chrY_T0000259:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2299457	2299501	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000259;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000259;transcript_name=HG002_chrY_T0000259;gene_name=CD99P1;ID=exon:HG002_chrY_T0000259:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2299502	2300151	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000259;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000259;transcript_name=HG002_chrY_T0000259;gene_name=CD99P1;ID=intron:HG002_chrY_T0000259:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000259;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000259;transcript_name=HG002_chrY_T0000259;gene_name=CD99P1;ID=exon:HG002_chrY_T0000259:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000259;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000259;transcript_name=HG002_chrY_T0000259;gene_name=CD99P1;ID=intron:HG002_chrY_T0000259:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000259;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000259;transcript_name=HG002_chrY_T0000259;gene_name=CD99P1;ID=exon:HG002_chrY_T0000259:9;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2315026	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000259;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000259;transcript_name=HG002_chrY_T0000259;gene_name=CD99P1;ID=intron:HG002_chrY_T0000259:9;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315380	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000259;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000259;transcript_name=HG002_chrY_T0000259;gene_name=CD99P1;ID=exon:HG002_chrY_T0000259:10;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286195	2315382	1000	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000260;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000260;gene_name=CD99P1;ID=HG002_chrY_T0000260;Name=CD99P1
HG002_chrY	CAT	exon	2286195	2286270	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000260;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000260;transcript_name=HG002_chrY_T0000260;gene_name=CD99P1;ID=exon:HG002_chrY_T0000260:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000260;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000260;transcript_name=HG002_chrY_T0000260;gene_name=CD99P1;ID=intron:HG002_chrY_T0000260:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000260;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000260;transcript_name=HG002_chrY_T0000260;gene_name=CD99P1;ID=exon:HG002_chrY_T0000260:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000260;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000260;transcript_name=HG002_chrY_T0000260;gene_name=CD99P1;ID=intron:HG002_chrY_T0000260:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000260;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000260;transcript_name=HG002_chrY_T0000260;gene_name=CD99P1;ID=exon:HG002_chrY_T0000260:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2300151	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000260;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000260;transcript_name=HG002_chrY_T0000260;gene_name=CD99P1;ID=intron:HG002_chrY_T0000260:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000260;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000260;transcript_name=HG002_chrY_T0000260;gene_name=CD99P1;ID=exon:HG002_chrY_T0000260:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000260;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000260;transcript_name=HG002_chrY_T0000260;gene_name=CD99P1;ID=intron:HG002_chrY_T0000260:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000260;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000260;transcript_name=HG002_chrY_T0000260;gene_name=CD99P1;ID=exon:HG002_chrY_T0000260:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2315026	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000260;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000260;transcript_name=HG002_chrY_T0000260;gene_name=CD99P1;ID=intron:HG002_chrY_T0000260:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315382	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000260;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000260;transcript_name=HG002_chrY_T0000260;gene_name=CD99P1;ID=exon:HG002_chrY_T0000260:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286210	2315382	1000	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000262;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000262;gene_name=CD99P1;ID=HG002_chrY_T0000262;Name=CD99P1
HG002_chrY	CAT	exon	2286210	2286270	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000262;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000262;transcript_name=HG002_chrY_T0000262;gene_name=CD99P1;ID=exon:HG002_chrY_T0000262:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000262;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000262;transcript_name=HG002_chrY_T0000262;gene_name=CD99P1;ID=intron:HG002_chrY_T0000262:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000262;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000262;transcript_name=HG002_chrY_T0000262;gene_name=CD99P1;ID=exon:HG002_chrY_T0000262:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2295297	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000262;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000262;transcript_name=HG002_chrY_T0000262;gene_name=CD99P1;ID=intron:HG002_chrY_T0000262:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295298	2295381	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000262;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000262;transcript_name=HG002_chrY_T0000262;gene_name=CD99P1;ID=exon:HG002_chrY_T0000262:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295382	2295504	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000262;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000262;transcript_name=HG002_chrY_T0000262;gene_name=CD99P1;ID=intron:HG002_chrY_T0000262:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000262;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000262;transcript_name=HG002_chrY_T0000262;gene_name=CD99P1;ID=exon:HG002_chrY_T0000262:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000262;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000262;transcript_name=HG002_chrY_T0000262;gene_name=CD99P1;ID=intron:HG002_chrY_T0000262:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000262;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000262;transcript_name=HG002_chrY_T0000262;gene_name=CD99P1;ID=exon:HG002_chrY_T0000262:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2299456	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000262;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000262;transcript_name=HG002_chrY_T0000262;gene_name=CD99P1;ID=intron:HG002_chrY_T0000262:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2299457	2299501	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000262;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000262;transcript_name=HG002_chrY_T0000262;gene_name=CD99P1;ID=exon:HG002_chrY_T0000262:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2299502	2300151	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000262;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000262;transcript_name=HG002_chrY_T0000262;gene_name=CD99P1;ID=intron:HG002_chrY_T0000262:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000262;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000262;transcript_name=HG002_chrY_T0000262;gene_name=CD99P1;ID=exon:HG002_chrY_T0000262:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000262;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000262;transcript_name=HG002_chrY_T0000262;gene_name=CD99P1;ID=intron:HG002_chrY_T0000262:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000262;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000262;transcript_name=HG002_chrY_T0000262;gene_name=CD99P1;ID=exon:HG002_chrY_T0000262:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2315026	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000262;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000262;transcript_name=HG002_chrY_T0000262;gene_name=CD99P1;ID=intron:HG002_chrY_T0000262:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315382	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000262;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000262;transcript_name=HG002_chrY_T0000262;gene_name=CD99P1;ID=exon:HG002_chrY_T0000262:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286210	2315382	1000	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000263;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000263;gene_name=CD99P1;ID=HG002_chrY_T0000263;Name=CD99P1
HG002_chrY	CAT	exon	2286210	2286270	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000263;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000263;transcript_name=HG002_chrY_T0000263;gene_name=CD99P1;ID=exon:HG002_chrY_T0000263:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000263;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000263;transcript_name=HG002_chrY_T0000263;gene_name=CD99P1;ID=intron:HG002_chrY_T0000263:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000263;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000263;transcript_name=HG002_chrY_T0000263;gene_name=CD99P1;ID=exon:HG002_chrY_T0000263:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000263;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000263;transcript_name=HG002_chrY_T0000263;gene_name=CD99P1;ID=intron:HG002_chrY_T0000263:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000263;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000263;transcript_name=HG002_chrY_T0000263;gene_name=CD99P1;ID=exon:HG002_chrY_T0000263:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000263;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000263;transcript_name=HG002_chrY_T0000263;gene_name=CD99P1;ID=intron:HG002_chrY_T0000263:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292765	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000263;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000263;transcript_name=HG002_chrY_T0000263;gene_name=CD99P1;ID=exon:HG002_chrY_T0000263:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292766	2295504	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000263;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000263;transcript_name=HG002_chrY_T0000263;gene_name=CD99P1;ID=intron:HG002_chrY_T0000263:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000263;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000263;transcript_name=HG002_chrY_T0000263;gene_name=CD99P1;ID=exon:HG002_chrY_T0000263:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000263;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000263;transcript_name=HG002_chrY_T0000263;gene_name=CD99P1;ID=intron:HG002_chrY_T0000263:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000263;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000263;transcript_name=HG002_chrY_T0000263;gene_name=CD99P1;ID=exon:HG002_chrY_T0000263:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2300151	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000263;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000263;transcript_name=HG002_chrY_T0000263;gene_name=CD99P1;ID=intron:HG002_chrY_T0000263:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000263;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000263;transcript_name=HG002_chrY_T0000263;gene_name=CD99P1;ID=exon:HG002_chrY_T0000263:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000263;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000263;transcript_name=HG002_chrY_T0000263;gene_name=CD99P1;ID=intron:HG002_chrY_T0000263:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000263;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000263;transcript_name=HG002_chrY_T0000263;gene_name=CD99P1;ID=exon:HG002_chrY_T0000263:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2315026	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000263;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000263;transcript_name=HG002_chrY_T0000263;gene_name=CD99P1;ID=intron:HG002_chrY_T0000263:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315382	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000263;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000263;transcript_name=HG002_chrY_T0000263;gene_name=CD99P1;ID=exon:HG002_chrY_T0000263:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286210	2305599	1000	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000264;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000264;gene_name=CD99P1;ID=HG002_chrY_T0000264;Name=CD99P1
HG002_chrY	CAT	exon	2286210	2286270	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000264;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000264;transcript_name=HG002_chrY_T0000264;gene_name=CD99P1;ID=exon:HG002_chrY_T0000264:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000264;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000264;transcript_name=HG002_chrY_T0000264;gene_name=CD99P1;ID=intron:HG002_chrY_T0000264:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000264;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000264;transcript_name=HG002_chrY_T0000264;gene_name=CD99P1;ID=exon:HG002_chrY_T0000264:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000264;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000264;transcript_name=HG002_chrY_T0000264;gene_name=CD99P1;ID=intron:HG002_chrY_T0000264:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000264;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000264;transcript_name=HG002_chrY_T0000264;gene_name=CD99P1;ID=exon:HG002_chrY_T0000264:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000264;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000264;transcript_name=HG002_chrY_T0000264;gene_name=CD99P1;ID=intron:HG002_chrY_T0000264:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000264;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000264;transcript_name=HG002_chrY_T0000264;gene_name=CD99P1;ID=exon:HG002_chrY_T0000264:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295504	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000264;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000264;transcript_name=HG002_chrY_T0000264;gene_name=CD99P1;ID=intron:HG002_chrY_T0000264:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000264;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000264;transcript_name=HG002_chrY_T0000264;gene_name=CD99P1;ID=exon:HG002_chrY_T0000264:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000264;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000264;transcript_name=HG002_chrY_T0000264;gene_name=CD99P1;ID=intron:HG002_chrY_T0000264:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000264;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000264;transcript_name=HG002_chrY_T0000264;gene_name=CD99P1;ID=exon:HG002_chrY_T0000264:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2300151	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000264;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000264;transcript_name=HG002_chrY_T0000264;gene_name=CD99P1;ID=intron:HG002_chrY_T0000264:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000264;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000264;transcript_name=HG002_chrY_T0000264;gene_name=CD99P1;ID=exon:HG002_chrY_T0000264:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000264;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000264;transcript_name=HG002_chrY_T0000264;gene_name=CD99P1;ID=intron:HG002_chrY_T0000264:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000264;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000264;transcript_name=HG002_chrY_T0000264;gene_name=CD99P1;ID=exon:HG002_chrY_T0000264:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2305160	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000264;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000264;transcript_name=HG002_chrY_T0000264;gene_name=CD99P1;ID=intron:HG002_chrY_T0000264:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2305161	2305599	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000264;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000264;transcript_name=HG002_chrY_T0000264;gene_name=CD99P1;ID=exon:HG002_chrY_T0000264:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286210	2315382	1000	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000265;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000265;gene_name=CD99P1;ID=HG002_chrY_T0000265;Name=CD99P1
HG002_chrY	CAT	exon	2286210	2286270	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000265;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000265;transcript_name=HG002_chrY_T0000265;gene_name=CD99P1;ID=exon:HG002_chrY_T0000265:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000265;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000265;transcript_name=HG002_chrY_T0000265;gene_name=CD99P1;ID=intron:HG002_chrY_T0000265:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000265;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000265;transcript_name=HG002_chrY_T0000265;gene_name=CD99P1;ID=exon:HG002_chrY_T0000265:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288880	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000265;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000265;transcript_name=HG002_chrY_T0000265;gene_name=CD99P1;ID=intron:HG002_chrY_T0000265:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288881	2288985	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000265;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000265;transcript_name=HG002_chrY_T0000265;gene_name=CD99P1;ID=exon:HG002_chrY_T0000265:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000265;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000265;transcript_name=HG002_chrY_T0000265;gene_name=CD99P1;ID=intron:HG002_chrY_T0000265:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000265;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000265;transcript_name=HG002_chrY_T0000265;gene_name=CD99P1;ID=exon:HG002_chrY_T0000265:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295504	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000265;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000265;transcript_name=HG002_chrY_T0000265;gene_name=CD99P1;ID=intron:HG002_chrY_T0000265:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000265;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000265;transcript_name=HG002_chrY_T0000265;gene_name=CD99P1;ID=exon:HG002_chrY_T0000265:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000265;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000265;transcript_name=HG002_chrY_T0000265;gene_name=CD99P1;ID=intron:HG002_chrY_T0000265:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000265;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000265;transcript_name=HG002_chrY_T0000265;gene_name=CD99P1;ID=exon:HG002_chrY_T0000265:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2300151	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000265;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000265;transcript_name=HG002_chrY_T0000265;gene_name=CD99P1;ID=intron:HG002_chrY_T0000265:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000265;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000265;transcript_name=HG002_chrY_T0000265;gene_name=CD99P1;ID=exon:HG002_chrY_T0000265:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000265;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000265;transcript_name=HG002_chrY_T0000265;gene_name=CD99P1;ID=intron:HG002_chrY_T0000265:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000265;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000265;transcript_name=HG002_chrY_T0000265;gene_name=CD99P1;ID=exon:HG002_chrY_T0000265:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2315026	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000265;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000265;transcript_name=HG002_chrY_T0000265;gene_name=CD99P1;ID=intron:HG002_chrY_T0000265:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315382	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000265;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000265;transcript_name=HG002_chrY_T0000265;gene_name=CD99P1;ID=exon:HG002_chrY_T0000265:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286210	2289161	1000	+	.	source_transcript=ENST00000850795.1;source_transcript_name=CD99P1-307;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850795.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000266;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000266;gene_name=CD99P1;ID=HG002_chrY_T0000266;Name=CD99P1
HG002_chrY	CAT	exon	2286210	2286270	.	+	.	source_transcript=ENST00000850795.1;source_transcript_name=CD99P1-307;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000266;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000266;transcript_name=HG002_chrY_T0000266;gene_name=CD99P1;ID=exon:HG002_chrY_T0000266:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000850795.1;source_transcript_name=CD99P1-307;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000266;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000266;transcript_name=HG002_chrY_T0000266;gene_name=CD99P1;ID=intron:HG002_chrY_T0000266:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850795.1;source_transcript_name=CD99P1-307;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000266;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000266;transcript_name=HG002_chrY_T0000266;gene_name=CD99P1;ID=exon:HG002_chrY_T0000266:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850795.1;source_transcript_name=CD99P1-307;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000266;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000266;transcript_name=HG002_chrY_T0000266;gene_name=CD99P1;ID=intron:HG002_chrY_T0000266:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2289161	.	+	.	source_transcript=ENST00000850795.1;source_transcript_name=CD99P1-307;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000266;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000266;transcript_name=HG002_chrY_T0000266;gene_name=CD99P1;ID=exon:HG002_chrY_T0000266:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286414	2300175	1000	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000267;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000267;gene_name=CD99P1;ID=HG002_chrY_T0000267;Name=CD99P1
HG002_chrY	CAT	exon	2286414	2286479	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000267;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000267;transcript_name=HG002_chrY_T0000267;gene_name=CD99P1;ID=exon:HG002_chrY_T0000267:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286480	2287770	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000267;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000267;transcript_name=HG002_chrY_T0000267;gene_name=CD99P1;ID=intron:HG002_chrY_T0000267:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000267;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000267;transcript_name=HG002_chrY_T0000267;gene_name=CD99P1;ID=exon:HG002_chrY_T0000267:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000267;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000267;transcript_name=HG002_chrY_T0000267;gene_name=CD99P1;ID=intron:HG002_chrY_T0000267:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000267;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000267;transcript_name=HG002_chrY_T0000267;gene_name=CD99P1;ID=exon:HG002_chrY_T0000267:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000267;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000267;transcript_name=HG002_chrY_T0000267;gene_name=CD99P1;ID=intron:HG002_chrY_T0000267:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000267;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000267;transcript_name=HG002_chrY_T0000267;gene_name=CD99P1;ID=exon:HG002_chrY_T0000267:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295504	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000267;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000267;transcript_name=HG002_chrY_T0000267;gene_name=CD99P1;ID=intron:HG002_chrY_T0000267:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000267;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000267;transcript_name=HG002_chrY_T0000267;gene_name=CD99P1;ID=exon:HG002_chrY_T0000267:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000267;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000267;transcript_name=HG002_chrY_T0000267;gene_name=CD99P1;ID=intron:HG002_chrY_T0000267:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000267;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000267;transcript_name=HG002_chrY_T0000267;gene_name=CD99P1;ID=exon:HG002_chrY_T0000267:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2300151	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000267;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000267;transcript_name=HG002_chrY_T0000267;gene_name=CD99P1;ID=intron:HG002_chrY_T0000267:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300175	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000267;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000267;transcript_name=HG002_chrY_T0000267;gene_name=CD99P1;ID=exon:HG002_chrY_T0000267:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286770	2315382	1000	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000268;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000268;gene_name=CD99P1;ID=HG002_chrY_T0000268;Name=CD99P1
HG002_chrY	CAT	exon	2286770	2287004	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000268;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000268;transcript_name=HG002_chrY_T0000268;gene_name=CD99P1;ID=exon:HG002_chrY_T0000268:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287005	2287770	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000268;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000268;transcript_name=HG002_chrY_T0000268;gene_name=CD99P1;ID=intron:HG002_chrY_T0000268:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000268;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000268;transcript_name=HG002_chrY_T0000268;gene_name=CD99P1;ID=exon:HG002_chrY_T0000268:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000268;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000268;transcript_name=HG002_chrY_T0000268;gene_name=CD99P1;ID=intron:HG002_chrY_T0000268:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000268;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000268;transcript_name=HG002_chrY_T0000268;gene_name=CD99P1;ID=exon:HG002_chrY_T0000268:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000268;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000268;transcript_name=HG002_chrY_T0000268;gene_name=CD99P1;ID=intron:HG002_chrY_T0000268:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000268;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000268;transcript_name=HG002_chrY_T0000268;gene_name=CD99P1;ID=exon:HG002_chrY_T0000268:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295504	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000268;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000268;transcript_name=HG002_chrY_T0000268;gene_name=CD99P1;ID=intron:HG002_chrY_T0000268:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000268;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000268;transcript_name=HG002_chrY_T0000268;gene_name=CD99P1;ID=exon:HG002_chrY_T0000268:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000268;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000268;transcript_name=HG002_chrY_T0000268;gene_name=CD99P1;ID=intron:HG002_chrY_T0000268:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000268;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000268;transcript_name=HG002_chrY_T0000268;gene_name=CD99P1;ID=exon:HG002_chrY_T0000268:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2299456	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000268;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000268;transcript_name=HG002_chrY_T0000268;gene_name=CD99P1;ID=intron:HG002_chrY_T0000268:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2299457	2299501	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000268;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000268;transcript_name=HG002_chrY_T0000268;gene_name=CD99P1;ID=exon:HG002_chrY_T0000268:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2299502	2300151	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000268;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000268;transcript_name=HG002_chrY_T0000268;gene_name=CD99P1;ID=intron:HG002_chrY_T0000268:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000268;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000268;transcript_name=HG002_chrY_T0000268;gene_name=CD99P1;ID=exon:HG002_chrY_T0000268:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000268;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000268;transcript_name=HG002_chrY_T0000268;gene_name=CD99P1;ID=intron:HG002_chrY_T0000268:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000268;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000268;transcript_name=HG002_chrY_T0000268;gene_name=CD99P1;ID=exon:HG002_chrY_T0000268:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2315026	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000268;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000268;transcript_name=HG002_chrY_T0000268;gene_name=CD99P1;ID=intron:HG002_chrY_T0000268:8;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315382	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000268;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000268;transcript_name=HG002_chrY_T0000268;gene_name=CD99P1;ID=exon:HG002_chrY_T0000268:9;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2286809	2315375	1000	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000269;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000269;gene_name=CD99P1;ID=HG002_chrY_T0000269;Name=CD99P1
HG002_chrY	CAT	exon	2286809	2287004	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000269;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000269;transcript_name=HG002_chrY_T0000269;gene_name=CD99P1;ID=exon:HG002_chrY_T0000269:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287005	2287770	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000269;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000269;transcript_name=HG002_chrY_T0000269;gene_name=CD99P1;ID=intron:HG002_chrY_T0000269:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000269;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000269;transcript_name=HG002_chrY_T0000269;gene_name=CD99P1;ID=exon:HG002_chrY_T0000269:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000269;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000269;transcript_name=HG002_chrY_T0000269;gene_name=CD99P1;ID=intron:HG002_chrY_T0000269:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000269;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000269;transcript_name=HG002_chrY_T0000269;gene_name=CD99P1;ID=exon:HG002_chrY_T0000269:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2295504	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000269;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000269;transcript_name=HG002_chrY_T0000269;gene_name=CD99P1;ID=intron:HG002_chrY_T0000269:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000269;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000269;transcript_name=HG002_chrY_T0000269;gene_name=CD99P1;ID=exon:HG002_chrY_T0000269:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000269;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000269;transcript_name=HG002_chrY_T0000269;gene_name=CD99P1;ID=intron:HG002_chrY_T0000269:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000269;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000269;transcript_name=HG002_chrY_T0000269;gene_name=CD99P1;ID=exon:HG002_chrY_T0000269:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2300115	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000269;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000269;transcript_name=HG002_chrY_T0000269;gene_name=CD99P1;ID=intron:HG002_chrY_T0000269:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300116	2300220	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000269;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000269;transcript_name=HG002_chrY_T0000269;gene_name=CD99P1;ID=exon:HG002_chrY_T0000269:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000269;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000269;transcript_name=HG002_chrY_T0000269;gene_name=CD99P1;ID=intron:HG002_chrY_T0000269:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000269;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000269;transcript_name=HG002_chrY_T0000269;gene_name=CD99P1;ID=exon:HG002_chrY_T0000269:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2315026	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000269;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000269;transcript_name=HG002_chrY_T0000269;gene_name=CD99P1;ID=intron:HG002_chrY_T0000269:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315375	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000269;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000269;transcript_name=HG002_chrY_T0000269;gene_name=CD99P1;ID=exon:HG002_chrY_T0000269:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2287141	2315386	1000	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000270;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000270;gene_name=CD99P1;ID=HG002_chrY_T0000270;Name=CD99P1
HG002_chrY	CAT	exon	2287141	2287813	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000270;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000270;transcript_name=HG002_chrY_T0000270;gene_name=CD99P1;ID=exon:HG002_chrY_T0000270:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000270;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000270;transcript_name=HG002_chrY_T0000270;gene_name=CD99P1;ID=intron:HG002_chrY_T0000270:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000270;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000270;transcript_name=HG002_chrY_T0000270;gene_name=CD99P1;ID=exon:HG002_chrY_T0000270:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000270;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000270;transcript_name=HG002_chrY_T0000270;gene_name=CD99P1;ID=intron:HG002_chrY_T0000270:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000270;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000270;transcript_name=HG002_chrY_T0000270;gene_name=CD99P1;ID=exon:HG002_chrY_T0000270:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295504	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000270;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000270;transcript_name=HG002_chrY_T0000270;gene_name=CD99P1;ID=intron:HG002_chrY_T0000270:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000270;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000270;transcript_name=HG002_chrY_T0000270;gene_name=CD99P1;ID=exon:HG002_chrY_T0000270:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000270;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000270;transcript_name=HG002_chrY_T0000270;gene_name=CD99P1;ID=intron:HG002_chrY_T0000270:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000270;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000270;transcript_name=HG002_chrY_T0000270;gene_name=CD99P1;ID=exon:HG002_chrY_T0000270:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2300151	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000270;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000270;transcript_name=HG002_chrY_T0000270;gene_name=CD99P1;ID=intron:HG002_chrY_T0000270:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000270;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000270;transcript_name=HG002_chrY_T0000270;gene_name=CD99P1;ID=exon:HG002_chrY_T0000270:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000270;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000270;transcript_name=HG002_chrY_T0000270;gene_name=CD99P1;ID=intron:HG002_chrY_T0000270:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000270;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000270;transcript_name=HG002_chrY_T0000270;gene_name=CD99P1;ID=exon:HG002_chrY_T0000270:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2315026	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000270;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000270;transcript_name=HG002_chrY_T0000270;gene_name=CD99P1;ID=intron:HG002_chrY_T0000270:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315386	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000270;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000270;transcript_name=HG002_chrY_T0000270;gene_name=CD99P1;ID=exon:HG002_chrY_T0000270:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2291829	2315389	1000	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000272;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000272;gene_name=CD99P1;ID=HG002_chrY_T0000272;Name=CD99P1
HG002_chrY	CAT	exon	2291829	2291893	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000272;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000272;transcript_name=HG002_chrY_T0000272;gene_name=CD99P1;ID=exon:HG002_chrY_T0000272:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2291894	2292581	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000272;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000272;transcript_name=HG002_chrY_T0000272;gene_name=CD99P1;ID=intron:HG002_chrY_T0000272:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000272;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000272;transcript_name=HG002_chrY_T0000272;gene_name=CD99P1;ID=exon:HG002_chrY_T0000272:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295504	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000272;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000272;transcript_name=HG002_chrY_T0000272;gene_name=CD99P1;ID=intron:HG002_chrY_T0000272:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000272;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000272;transcript_name=HG002_chrY_T0000272;gene_name=CD99P1;ID=exon:HG002_chrY_T0000272:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000272;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000272;transcript_name=HG002_chrY_T0000272;gene_name=CD99P1;ID=intron:HG002_chrY_T0000272:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000272;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000272;transcript_name=HG002_chrY_T0000272;gene_name=CD99P1;ID=exon:HG002_chrY_T0000272:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2300151	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000272;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000272;transcript_name=HG002_chrY_T0000272;gene_name=CD99P1;ID=intron:HG002_chrY_T0000272:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000272;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000272;transcript_name=HG002_chrY_T0000272;gene_name=CD99P1;ID=exon:HG002_chrY_T0000272:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000272;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000272;transcript_name=HG002_chrY_T0000272;gene_name=CD99P1;ID=intron:HG002_chrY_T0000272:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000272;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000272;transcript_name=HG002_chrY_T0000272;gene_name=CD99P1;ID=exon:HG002_chrY_T0000272:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2315026	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000272;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000272;transcript_name=HG002_chrY_T0000272;gene_name=CD99P1;ID=intron:HG002_chrY_T0000272:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315389	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000272;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000272;transcript_name=HG002_chrY_T0000272;gene_name=CD99P1;ID=exon:HG002_chrY_T0000272:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2291834	2315382	1000	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000273;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000273;gene_name=CD99P1;ID=HG002_chrY_T0000273;Name=CD99P1
HG002_chrY	CAT	exon	2291834	2291893	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000273;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000273;transcript_name=HG002_chrY_T0000273;gene_name=CD99P1;ID=exon:HG002_chrY_T0000273:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2291894	2292581	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000273;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000273;transcript_name=HG002_chrY_T0000273;gene_name=CD99P1;ID=intron:HG002_chrY_T0000273:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000273;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000273;transcript_name=HG002_chrY_T0000273;gene_name=CD99P1;ID=exon:HG002_chrY_T0000273:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295504	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000273;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000273;transcript_name=HG002_chrY_T0000273;gene_name=CD99P1;ID=intron:HG002_chrY_T0000273:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000273;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000273;transcript_name=HG002_chrY_T0000273;gene_name=CD99P1;ID=exon:HG002_chrY_T0000273:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000273;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000273;transcript_name=HG002_chrY_T0000273;gene_name=CD99P1;ID=intron:HG002_chrY_T0000273:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000273;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000273;transcript_name=HG002_chrY_T0000273;gene_name=CD99P1;ID=exon:HG002_chrY_T0000273:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2299456	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000273;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000273;transcript_name=HG002_chrY_T0000273;gene_name=CD99P1;ID=intron:HG002_chrY_T0000273:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2299457	2299501	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000273;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000273;transcript_name=HG002_chrY_T0000273;gene_name=CD99P1;ID=exon:HG002_chrY_T0000273:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2299502	2300151	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000273;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000273;transcript_name=HG002_chrY_T0000273;gene_name=CD99P1;ID=intron:HG002_chrY_T0000273:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000273;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000273;transcript_name=HG002_chrY_T0000273;gene_name=CD99P1;ID=exon:HG002_chrY_T0000273:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000273;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000273;transcript_name=HG002_chrY_T0000273;gene_name=CD99P1;ID=intron:HG002_chrY_T0000273:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000273;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000273;transcript_name=HG002_chrY_T0000273;gene_name=CD99P1;ID=exon:HG002_chrY_T0000273:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2315026	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000273;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000273;transcript_name=HG002_chrY_T0000273;gene_name=CD99P1;ID=intron:HG002_chrY_T0000273:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315382	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000273;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000273;transcript_name=HG002_chrY_T0000273;gene_name=CD99P1;ID=exon:HG002_chrY_T0000273:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2291853	2315388	1000	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000274;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000274;gene_name=CD99P1;ID=HG002_chrY_T0000274;Name=CD99P1
HG002_chrY	CAT	exon	2291853	2291893	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000274;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000274;transcript_name=HG002_chrY_T0000274;gene_name=CD99P1;ID=exon:HG002_chrY_T0000274:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2291894	2292581	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000274;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000274;transcript_name=HG002_chrY_T0000274;gene_name=CD99P1;ID=intron:HG002_chrY_T0000274:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292765	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000274;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000274;transcript_name=HG002_chrY_T0000274;gene_name=CD99P1;ID=exon:HG002_chrY_T0000274:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292766	2295504	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000274;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000274;transcript_name=HG002_chrY_T0000274;gene_name=CD99P1;ID=intron:HG002_chrY_T0000274:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000274;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000274;transcript_name=HG002_chrY_T0000274;gene_name=CD99P1;ID=exon:HG002_chrY_T0000274:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000274;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000274;transcript_name=HG002_chrY_T0000274;gene_name=CD99P1;ID=intron:HG002_chrY_T0000274:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000274;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000274;transcript_name=HG002_chrY_T0000274;gene_name=CD99P1;ID=exon:HG002_chrY_T0000274:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2300151	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000274;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000274;transcript_name=HG002_chrY_T0000274;gene_name=CD99P1;ID=intron:HG002_chrY_T0000274:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000274;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000274;transcript_name=HG002_chrY_T0000274;gene_name=CD99P1;ID=exon:HG002_chrY_T0000274:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000274;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000274;transcript_name=HG002_chrY_T0000274;gene_name=CD99P1;ID=intron:HG002_chrY_T0000274:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000274;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000274;transcript_name=HG002_chrY_T0000274;gene_name=CD99P1;ID=exon:HG002_chrY_T0000274:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2315026	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000274;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000274;transcript_name=HG002_chrY_T0000274;gene_name=CD99P1;ID=intron:HG002_chrY_T0000274:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315388	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000274;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000274;transcript_name=HG002_chrY_T0000274;gene_name=CD99P1;ID=exon:HG002_chrY_T0000274:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2293385	2315747	1000	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000275;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000275;gene_name=CD99P1;ID=HG002_chrY_T0000275;Name=CD99P1
HG002_chrY	CAT	exon	2293385	2295549	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000275;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000275;transcript_name=HG002_chrY_T0000275;gene_name=CD99P1;ID=exon:HG002_chrY_T0000275:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000275;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000275;transcript_name=HG002_chrY_T0000275;gene_name=CD99P1;ID=intron:HG002_chrY_T0000275:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000275;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000275;transcript_name=HG002_chrY_T0000275;gene_name=CD99P1;ID=exon:HG002_chrY_T0000275:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2300151	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000275;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000275;transcript_name=HG002_chrY_T0000275;gene_name=CD99P1;ID=intron:HG002_chrY_T0000275:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000275;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000275;transcript_name=HG002_chrY_T0000275;gene_name=CD99P1;ID=exon:HG002_chrY_T0000275:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000275;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000275;transcript_name=HG002_chrY_T0000275;gene_name=CD99P1;ID=intron:HG002_chrY_T0000275:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000275;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000275;transcript_name=HG002_chrY_T0000275;gene_name=CD99P1;ID=exon:HG002_chrY_T0000275:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2315026	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000275;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000275;transcript_name=HG002_chrY_T0000275;gene_name=CD99P1;ID=intron:HG002_chrY_T0000275:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315747	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000275;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000275;transcript_name=HG002_chrY_T0000275;gene_name=CD99P1;ID=exon:HG002_chrY_T0000275:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2295465	2315382	1000	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000276;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000276;gene_name=CD99P1;ID=HG002_chrY_T0000276;Name=CD99P1
HG002_chrY	CAT	exon	2295465	2295549	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000276;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000276;transcript_name=HG002_chrY_T0000276;gene_name=CD99P1;ID=exon:HG002_chrY_T0000276:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000276;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000276;transcript_name=HG002_chrY_T0000276;gene_name=CD99P1;ID=intron:HG002_chrY_T0000276:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000276;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000276;transcript_name=HG002_chrY_T0000276;gene_name=CD99P1;ID=exon:HG002_chrY_T0000276:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2299456	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000276;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000276;transcript_name=HG002_chrY_T0000276;gene_name=CD99P1;ID=intron:HG002_chrY_T0000276:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2299457	2299501	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000276;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000276;transcript_name=HG002_chrY_T0000276;gene_name=CD99P1;ID=exon:HG002_chrY_T0000276:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2299502	2300151	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000276;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000276;transcript_name=HG002_chrY_T0000276;gene_name=CD99P1;ID=intron:HG002_chrY_T0000276:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000276;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000276;transcript_name=HG002_chrY_T0000276;gene_name=CD99P1;ID=exon:HG002_chrY_T0000276:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000276;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000276;transcript_name=HG002_chrY_T0000276;gene_name=CD99P1;ID=intron:HG002_chrY_T0000276:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000276;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000276;transcript_name=HG002_chrY_T0000276;gene_name=CD99P1;ID=exon:HG002_chrY_T0000276:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2315026	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000276;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000276;transcript_name=HG002_chrY_T0000276;gene_name=CD99P1;ID=intron:HG002_chrY_T0000276:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315382	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000276;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000276;transcript_name=HG002_chrY_T0000276;gene_name=CD99P1;ID=exon:HG002_chrY_T0000276:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2295490	2335999	1000	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000277;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000277;gene_name=CD99P1;ID=HG002_chrY_T0000277;Name=CD99P1
HG002_chrY	CAT	exon	2295490	2295549	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000277;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000277;transcript_name=HG002_chrY_T0000277;gene_name=CD99P1;ID=exon:HG002_chrY_T0000277:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000277;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000277;transcript_name=HG002_chrY_T0000277;gene_name=CD99P1;ID=intron:HG002_chrY_T0000277:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000277;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000277;transcript_name=HG002_chrY_T0000277;gene_name=CD99P1;ID=exon:HG002_chrY_T0000277:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2300151	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000277;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000277;transcript_name=HG002_chrY_T0000277;gene_name=CD99P1;ID=intron:HG002_chrY_T0000277:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000277;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000277;transcript_name=HG002_chrY_T0000277;gene_name=CD99P1;ID=exon:HG002_chrY_T0000277:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2300221	2303368	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000277;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000277;transcript_name=HG002_chrY_T0000277;gene_name=CD99P1;ID=intron:HG002_chrY_T0000277:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000277;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000277;transcript_name=HG002_chrY_T0000277;gene_name=CD99P1;ID=exon:HG002_chrY_T0000277:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2335568	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000277;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000277;transcript_name=HG002_chrY_T0000277;gene_name=CD99P1;ID=intron:HG002_chrY_T0000277:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2335569	2335999	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000277;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000277;transcript_name=HG002_chrY_T0000277;gene_name=CD99P1;ID=exon:HG002_chrY_T0000277:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2295528	2315382	1000	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000278;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_G0000047;transcript_name=HG002_chrY_T0000278;gene_name=CD99P1;ID=HG002_chrY_T0000278;Name=CD99P1
HG002_chrY	CAT	exon	2295528	2295549	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000278;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000278;transcript_name=HG002_chrY_T0000278;gene_name=CD99P1;ID=exon:HG002_chrY_T0000278:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000278;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000278;transcript_name=HG002_chrY_T0000278;gene_name=CD99P1;ID=intron:HG002_chrY_T0000278:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000278;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000278;transcript_name=HG002_chrY_T0000278;gene_name=CD99P1;ID=exon:HG002_chrY_T0000278:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2303368	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000278;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000278;transcript_name=HG002_chrY_T0000278;gene_name=CD99P1;ID=intron:HG002_chrY_T0000278:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2303369	2303414	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000278;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000278;transcript_name=HG002_chrY_T0000278;gene_name=CD99P1;ID=exon:HG002_chrY_T0000278:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2303415	2315026	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000278;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000278;transcript_name=HG002_chrY_T0000278;gene_name=CD99P1;ID=intron:HG002_chrY_T0000278:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2315027	2315382	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000278;gene_id=HG002_chrY_G0000047;Parent=HG002_chrY_T0000278;transcript_name=HG002_chrY_T0000278;gene_name=CD99P1;ID=exon:HG002_chrY_T0000278:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	2285992	2286055	.	+	.	source_gene_common_name=MIR6089;source_gene=ENSG00000292346.1;alternative_source_transcripts=ENST00000711167.1,ENST00000711167.1;gene_id=HG002_chrY_G0000048;gene_biotype=miRNA;gene_name=MIR6089;gene_sources=liftoff;ID=HG002_chrY_G0000048;Name=MIR6089
HG002_chrY	CAT	transcript	2285992	2286055	1000	+	.	source_transcript=ENST00000711167.1;source_transcript_name=MIR6089-202;source_gene=ENSG00000292346.1;source_gene_biotype=miRNA;original_gene_id=ENSG00000292346.1;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=ENST00000711167.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711167.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=ENST00000711167.1,ENST00000711167.1;transcript_id=HG002_chrY_T0000225;gene_id=HG002_chrY_G0000048;Parent=HG002_chrY_G0000048;transcript_name=HG002_chrY_T0000225;gene_name=MIR6089;ID=HG002_chrY_T0000225;Name=MIR6089
HG002_chrY	CAT	exon	2285992	2286055	.	+	.	source_transcript=ENST00000711167.1;source_transcript_name=MIR6089-202;source_gene=ENSG00000292346.1;source_gene_biotype=miRNA;original_gene_id=ENSG00000292346.1;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=ENST00000711167.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711167.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=ENST00000711167.1,ENST00000711167.1;transcript_id=HG002_chrY_T0000225;gene_id=HG002_chrY_G0000048;Parent=HG002_chrY_T0000225;transcript_name=HG002_chrY_T0000225;gene_name=MIR6089;ID=exon:HG002_chrY_T0000225:0;Name=MIR6089;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	2286205	2300220	.	+	.	source_gene_common_name=CD99P1;source_gene=ENSG00000292361.1;gene_id=HG002_chrY_G0000049;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=CD99P1;gene_sources=liftoff;ID=HG002_chrY_G0000049;Name=CD99P1
HG002_chrY	CAT	transcript	2286205	2300220	1000	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000261;gene_id=HG002_chrY_G0000049;Parent=HG002_chrY_G0000049;transcript_name=HG002_chrY_T0000261;gene_name=CD99P1;ID=HG002_chrY_T0000261;Name=CD99P1
HG002_chrY	CAT	exon	2286205	2286270	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000261;gene_id=HG002_chrY_G0000049;Parent=HG002_chrY_T0000261;transcript_name=HG002_chrY_T0000261;gene_name=CD99P1;ID=exon:HG002_chrY_T0000261:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2286271	2287770	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000261;gene_id=HG002_chrY_G0000049;Parent=HG002_chrY_T0000261;transcript_name=HG002_chrY_T0000261;gene_name=CD99P1;ID=intron:HG002_chrY_T0000261:0;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2287771	2287813	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000261;gene_id=HG002_chrY_G0000049;Parent=HG002_chrY_T0000261;transcript_name=HG002_chrY_T0000261;gene_name=CD99P1;ID=exon:HG002_chrY_T0000261:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2287814	2288916	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000261;gene_id=HG002_chrY_G0000049;Parent=HG002_chrY_T0000261;transcript_name=HG002_chrY_T0000261;gene_name=CD99P1;ID=intron:HG002_chrY_T0000261:1;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2288917	2288985	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000261;gene_id=HG002_chrY_G0000049;Parent=HG002_chrY_T0000261;transcript_name=HG002_chrY_T0000261;gene_name=CD99P1;ID=exon:HG002_chrY_T0000261:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2288986	2292581	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000261;gene_id=HG002_chrY_G0000049;Parent=HG002_chrY_T0000261;transcript_name=HG002_chrY_T0000261;gene_name=CD99P1;ID=intron:HG002_chrY_T0000261:2;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2292582	2292735	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000261;gene_id=HG002_chrY_G0000049;Parent=HG002_chrY_T0000261;transcript_name=HG002_chrY_T0000261;gene_name=CD99P1;ID=exon:HG002_chrY_T0000261:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2292736	2295504	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000261;gene_id=HG002_chrY_G0000049;Parent=HG002_chrY_T0000261;transcript_name=HG002_chrY_T0000261;gene_name=CD99P1;ID=intron:HG002_chrY_T0000261:3;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2295505	2295549	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000261;gene_id=HG002_chrY_G0000049;Parent=HG002_chrY_T0000261;transcript_name=HG002_chrY_T0000261;gene_name=CD99P1;ID=exon:HG002_chrY_T0000261:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2295550	2296193	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000261;gene_id=HG002_chrY_G0000049;Parent=HG002_chrY_T0000261;transcript_name=HG002_chrY_T0000261;gene_name=CD99P1;ID=intron:HG002_chrY_T0000261:4;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2296194	2296262	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000261;gene_id=HG002_chrY_G0000049;Parent=HG002_chrY_T0000261;transcript_name=HG002_chrY_T0000261;gene_name=CD99P1;ID=exon:HG002_chrY_T0000261:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2296263	2299456	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000261;gene_id=HG002_chrY_G0000049;Parent=HG002_chrY_T0000261;transcript_name=HG002_chrY_T0000261;gene_name=CD99P1;ID=intron:HG002_chrY_T0000261:5;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2299457	2299501	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000261;gene_id=HG002_chrY_G0000049;Parent=HG002_chrY_T0000261;transcript_name=HG002_chrY_T0000261;gene_name=CD99P1;ID=exon:HG002_chrY_T0000261:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2299502	2300151	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000261;gene_id=HG002_chrY_G0000049;Parent=HG002_chrY_T0000261;transcript_name=HG002_chrY_T0000261;gene_name=CD99P1;ID=intron:HG002_chrY_T0000261:6;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2300152	2300220	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG002_chrY_T0000261;gene_id=HG002_chrY_G0000049;Parent=HG002_chrY_T0000261;transcript_name=HG002_chrY_T0000261;gene_name=CD99P1;ID=exon:HG002_chrY_T0000261:7;Name=CD99P1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	2289755	2292113	.	-	.	source_gene_common_name=LINC00102;source_gene=ENSG00000292347.1;alternative_source_transcripts=ENST00000711166.1,ENST00000711166.1;gene_id=HG002_chrY_G0000050;gene_biotype=lncRNA;gene_name=LINC00102;gene_sources=liftoff;ID=HG002_chrY_G0000050;Name=LINC00102
HG002_chrY	CAT	transcript	2289755	2292113	1000	-	.	source_transcript=ENST00000711166.1;source_transcript_name=LINC00102-202;source_gene=ENSG00000292347.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292347.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711166.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711166.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=ENST00000711166.1,ENST00000711166.1;transcript_id=HG002_chrY_T0000271;gene_id=HG002_chrY_G0000050;Parent=HG002_chrY_G0000050;transcript_name=HG002_chrY_T0000271;gene_name=LINC00102;ID=HG002_chrY_T0000271;Name=LINC00102
HG002_chrY	CAT	exon	2289755	2290463	.	-	.	source_transcript=ENST00000711166.1;source_transcript_name=LINC00102-202;source_gene=ENSG00000292347.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292347.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711166.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=ENST00000711166.1,ENST00000711166.1;transcript_id=HG002_chrY_T0000271;gene_id=HG002_chrY_G0000050;Parent=HG002_chrY_T0000271;transcript_name=HG002_chrY_T0000271;gene_name=LINC00102;ID=exon:HG002_chrY_T0000271:0;Name=LINC00102;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2290464	2291482	.	-	.	source_transcript=ENST00000711166.1;source_transcript_name=LINC00102-202;source_gene=ENSG00000292347.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292347.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711166.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=ENST00000711166.1,ENST00000711166.1;transcript_id=HG002_chrY_T0000271;gene_id=HG002_chrY_G0000050;Parent=HG002_chrY_T0000271;transcript_name=HG002_chrY_T0000271;gene_name=LINC00102;ID=intron:HG002_chrY_T0000271:0;Name=LINC00102;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2291483	2292113	.	-	.	source_transcript=ENST00000711166.1;source_transcript_name=LINC00102-202;source_gene=ENSG00000292347.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292347.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711166.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=ENST00000711166.1,ENST00000711166.1;transcript_id=HG002_chrY_T0000271;gene_id=HG002_chrY_G0000050;Parent=HG002_chrY_T0000271;transcript_name=HG002_chrY_T0000271;gene_name=LINC00102;ID=exon:HG002_chrY_T0000271:1;Name=LINC00102;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	2368042	2418165	.	+	.	source_gene_common_name=CD99;source_gene=ENSG00000292348.1;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;gene_id=HG002_chrY_G0000051;gene_biotype=protein_coding;gene_name=CD99;gene_sources=liftoff;ID=HG002_chrY_G0000051;Name=CD99
HG002_chrY	CAT	transcript	2368042	2418156	100	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_G0000051;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=HG002_chrY_T0000279;Name=CD99
HG002_chrY	CAT	exon	2368042	2368282	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000279;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=exon:HG002_chrY_T0000279:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2368216	2368282	.	+	0	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000279;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=CDS:HG002_chrY_T0000279:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	2368216	2368218	.	+	0	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000279;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=start_codon:HG002_chrY_T0000279;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2368283	2391282	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000279;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=intron:HG002_chrY_T0000279:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2391283	2391315	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000279;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=exon:HG002_chrY_T0000279:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2391283	2391315	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000279;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=CDS:HG002_chrY_T0000279:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2391316	2394469	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000279;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=intron:HG002_chrY_T0000279:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2394470	2394517	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000279;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=exon:HG002_chrY_T0000279:2;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2394470	2394517	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000279;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=CDS:HG002_chrY_T0000279:2;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2394518	2396523	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000279;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=intron:HG002_chrY_T0000279:2;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2396524	2396568	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000279;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=exon:HG002_chrY_T0000279:3;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2396524	2396568	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000279;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=CDS:HG002_chrY_T0000279:3;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2396569	2397218	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000279;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=intron:HG002_chrY_T0000279:3;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2397219	2397287	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000279;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=exon:HG002_chrY_T0000279:4;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2397219	2397287	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000279;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=CDS:HG002_chrY_T0000279:4;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2397288	2399490	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000279;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=intron:HG002_chrY_T0000279:4;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2399491	2399538	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000279;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=exon:HG002_chrY_T0000279:5;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2399491	2399538	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000279;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=CDS:HG002_chrY_T0000279:5;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2399539	2400177	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000279;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=intron:HG002_chrY_T0000279:5;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2400178	2400228	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000279;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=exon:HG002_chrY_T0000279:6;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2400178	2400228	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000279;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=CDS:HG002_chrY_T0000279:6;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2400229	2403123	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000279;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=intron:HG002_chrY_T0000279:6;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2403124	2403237	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000279;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=exon:HG002_chrY_T0000279:7;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2403124	2403237	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000279;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=CDS:HG002_chrY_T0000279:7;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2403238	2410214	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000279;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=intron:HG002_chrY_T0000279:7;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2410215	2410232	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000279;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=exon:HG002_chrY_T0000279:8;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2410215	2410222	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000279;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=CDS:HG002_chrY_T0000279:8;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	2410220	2410222	.	+	0	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000279;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=stop_codon:HG002_chrY_T0000279;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2410233	2415057	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000279;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=intron:HG002_chrY_T0000279:8;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2415058	2415111	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000279;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=exon:HG002_chrY_T0000279:9;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2415112	2417634	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000279;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=intron:HG002_chrY_T0000279:9;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2417635	2418156	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG002_chrY_T0000279;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000279;transcript_name=HG002_chrY_T0000279;gene_name=CD99;ID=exon:HG002_chrY_T0000279:10;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2368131	2417957	100	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG002_chrY_T0000280;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_G0000051;transcript_name=HG002_chrY_T0000280;gene_name=CD99;ID=HG002_chrY_T0000280;Name=CD99
HG002_chrY	CAT	exon	2368131	2368282	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG002_chrY_T0000280;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000280;transcript_name=HG002_chrY_T0000280;gene_name=CD99;ID=exon:HG002_chrY_T0000280:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2368216	2368282	.	+	0	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG002_chrY_T0000280;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000280;transcript_name=HG002_chrY_T0000280;gene_name=CD99;ID=CDS:HG002_chrY_T0000280:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	2368216	2368218	.	+	0	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG002_chrY_T0000280;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000280;transcript_name=HG002_chrY_T0000280;gene_name=CD99;ID=start_codon:HG002_chrY_T0000280;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2368283	2391282	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG002_chrY_T0000280;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000280;transcript_name=HG002_chrY_T0000280;gene_name=CD99;ID=intron:HG002_chrY_T0000280:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2391283	2391315	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG002_chrY_T0000280;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000280;transcript_name=HG002_chrY_T0000280;gene_name=CD99;ID=exon:HG002_chrY_T0000280:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2391283	2391315	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG002_chrY_T0000280;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000280;transcript_name=HG002_chrY_T0000280;gene_name=CD99;ID=CDS:HG002_chrY_T0000280:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2391316	2396523	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG002_chrY_T0000280;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000280;transcript_name=HG002_chrY_T0000280;gene_name=CD99;ID=intron:HG002_chrY_T0000280:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2396524	2396568	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG002_chrY_T0000280;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000280;transcript_name=HG002_chrY_T0000280;gene_name=CD99;ID=exon:HG002_chrY_T0000280:2;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2396524	2396568	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG002_chrY_T0000280;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000280;transcript_name=HG002_chrY_T0000280;gene_name=CD99;ID=CDS:HG002_chrY_T0000280:2;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2396569	2397218	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG002_chrY_T0000280;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000280;transcript_name=HG002_chrY_T0000280;gene_name=CD99;ID=intron:HG002_chrY_T0000280:2;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2397219	2397287	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG002_chrY_T0000280;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000280;transcript_name=HG002_chrY_T0000280;gene_name=CD99;ID=exon:HG002_chrY_T0000280:3;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2397219	2397287	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG002_chrY_T0000280;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000280;transcript_name=HG002_chrY_T0000280;gene_name=CD99;ID=CDS:HG002_chrY_T0000280:3;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2397288	2399490	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG002_chrY_T0000280;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000280;transcript_name=HG002_chrY_T0000280;gene_name=CD99;ID=intron:HG002_chrY_T0000280:3;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2399491	2399538	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG002_chrY_T0000280;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000280;transcript_name=HG002_chrY_T0000280;gene_name=CD99;ID=exon:HG002_chrY_T0000280:4;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2399491	2399538	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG002_chrY_T0000280;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000280;transcript_name=HG002_chrY_T0000280;gene_name=CD99;ID=CDS:HG002_chrY_T0000280:4;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2399539	2400177	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG002_chrY_T0000280;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000280;transcript_name=HG002_chrY_T0000280;gene_name=CD99;ID=intron:HG002_chrY_T0000280:4;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2400178	2400228	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG002_chrY_T0000280;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000280;transcript_name=HG002_chrY_T0000280;gene_name=CD99;ID=exon:HG002_chrY_T0000280:5;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2400178	2400228	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG002_chrY_T0000280;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000280;transcript_name=HG002_chrY_T0000280;gene_name=CD99;ID=CDS:HG002_chrY_T0000280:5;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2400229	2403123	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG002_chrY_T0000280;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000280;transcript_name=HG002_chrY_T0000280;gene_name=CD99;ID=intron:HG002_chrY_T0000280:5;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2403124	2403237	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG002_chrY_T0000280;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000280;transcript_name=HG002_chrY_T0000280;gene_name=CD99;ID=exon:HG002_chrY_T0000280:6;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2403124	2403237	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG002_chrY_T0000280;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000280;transcript_name=HG002_chrY_T0000280;gene_name=CD99;ID=CDS:HG002_chrY_T0000280:6;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2403238	2415054	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG002_chrY_T0000280;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000280;transcript_name=HG002_chrY_T0000280;gene_name=CD99;ID=intron:HG002_chrY_T0000280:6;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2415055	2415111	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG002_chrY_T0000280;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000280;transcript_name=HG002_chrY_T0000280;gene_name=CD99;ID=exon:HG002_chrY_T0000280:7;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2415055	2415111	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG002_chrY_T0000280;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000280;transcript_name=HG002_chrY_T0000280;gene_name=CD99;ID=CDS:HG002_chrY_T0000280:7;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2415112	2417634	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG002_chrY_T0000280;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000280;transcript_name=HG002_chrY_T0000280;gene_name=CD99;ID=intron:HG002_chrY_T0000280:7;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2417635	2417957	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG002_chrY_T0000280;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000280;transcript_name=HG002_chrY_T0000280;gene_name=CD99;ID=exon:HG002_chrY_T0000280:8;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2417635	2417660	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG002_chrY_T0000280;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000280;transcript_name=HG002_chrY_T0000280;gene_name=CD99;ID=CDS:HG002_chrY_T0000280:8;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	2417658	2417660	.	+	0	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG002_chrY_T0000280;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000280;transcript_name=HG002_chrY_T0000280;gene_name=CD99;ID=stop_codon:HG002_chrY_T0000280;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2368135	2410525	100	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG002_chrY_T0000281;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_G0000051;transcript_name=HG002_chrY_T0000281;gene_name=CD99;ID=HG002_chrY_T0000281;Name=CD99
HG002_chrY	CAT	exon	2368135	2368282	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG002_chrY_T0000281;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000281;transcript_name=HG002_chrY_T0000281;gene_name=CD99;ID=exon:HG002_chrY_T0000281:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2368216	2368282	.	+	0	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG002_chrY_T0000281;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000281;transcript_name=HG002_chrY_T0000281;gene_name=CD99;ID=CDS:HG002_chrY_T0000281:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	2368216	2368218	.	+	0	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG002_chrY_T0000281;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000281;transcript_name=HG002_chrY_T0000281;gene_name=CD99;ID=start_codon:HG002_chrY_T0000281;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2368283	2391282	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG002_chrY_T0000281;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000281;transcript_name=HG002_chrY_T0000281;gene_name=CD99;ID=intron:HG002_chrY_T0000281:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2391283	2391315	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG002_chrY_T0000281;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000281;transcript_name=HG002_chrY_T0000281;gene_name=CD99;ID=exon:HG002_chrY_T0000281:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2391283	2391315	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG002_chrY_T0000281;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000281;transcript_name=HG002_chrY_T0000281;gene_name=CD99;ID=CDS:HG002_chrY_T0000281:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2391316	2394469	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG002_chrY_T0000281;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000281;transcript_name=HG002_chrY_T0000281;gene_name=CD99;ID=intron:HG002_chrY_T0000281:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2394470	2394517	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG002_chrY_T0000281;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000281;transcript_name=HG002_chrY_T0000281;gene_name=CD99;ID=exon:HG002_chrY_T0000281:2;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2394470	2394517	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG002_chrY_T0000281;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000281;transcript_name=HG002_chrY_T0000281;gene_name=CD99;ID=CDS:HG002_chrY_T0000281:2;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2394518	2396523	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG002_chrY_T0000281;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000281;transcript_name=HG002_chrY_T0000281;gene_name=CD99;ID=intron:HG002_chrY_T0000281:2;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2396524	2396568	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG002_chrY_T0000281;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000281;transcript_name=HG002_chrY_T0000281;gene_name=CD99;ID=exon:HG002_chrY_T0000281:3;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2396524	2396568	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG002_chrY_T0000281;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000281;transcript_name=HG002_chrY_T0000281;gene_name=CD99;ID=CDS:HG002_chrY_T0000281:3;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2396569	2397218	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG002_chrY_T0000281;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000281;transcript_name=HG002_chrY_T0000281;gene_name=CD99;ID=intron:HG002_chrY_T0000281:3;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2397219	2397287	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG002_chrY_T0000281;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000281;transcript_name=HG002_chrY_T0000281;gene_name=CD99;ID=exon:HG002_chrY_T0000281:4;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2397219	2397287	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG002_chrY_T0000281;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000281;transcript_name=HG002_chrY_T0000281;gene_name=CD99;ID=CDS:HG002_chrY_T0000281:4;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2397288	2399490	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG002_chrY_T0000281;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000281;transcript_name=HG002_chrY_T0000281;gene_name=CD99;ID=intron:HG002_chrY_T0000281:4;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2399491	2399538	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG002_chrY_T0000281;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000281;transcript_name=HG002_chrY_T0000281;gene_name=CD99;ID=exon:HG002_chrY_T0000281:5;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2399491	2399538	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG002_chrY_T0000281;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000281;transcript_name=HG002_chrY_T0000281;gene_name=CD99;ID=CDS:HG002_chrY_T0000281:5;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2399539	2400177	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG002_chrY_T0000281;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000281;transcript_name=HG002_chrY_T0000281;gene_name=CD99;ID=intron:HG002_chrY_T0000281:5;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2400178	2400228	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG002_chrY_T0000281;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000281;transcript_name=HG002_chrY_T0000281;gene_name=CD99;ID=exon:HG002_chrY_T0000281:6;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2400178	2400228	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG002_chrY_T0000281;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000281;transcript_name=HG002_chrY_T0000281;gene_name=CD99;ID=CDS:HG002_chrY_T0000281:6;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2400229	2403123	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG002_chrY_T0000281;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000281;transcript_name=HG002_chrY_T0000281;gene_name=CD99;ID=intron:HG002_chrY_T0000281:6;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2403124	2403237	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG002_chrY_T0000281;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000281;transcript_name=HG002_chrY_T0000281;gene_name=CD99;ID=exon:HG002_chrY_T0000281:7;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2403124	2403237	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG002_chrY_T0000281;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000281;transcript_name=HG002_chrY_T0000281;gene_name=CD99;ID=CDS:HG002_chrY_T0000281:7;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2403238	2404156	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG002_chrY_T0000281;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000281;transcript_name=HG002_chrY_T0000281;gene_name=CD99;ID=intron:HG002_chrY_T0000281:7;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2404157	2404207	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG002_chrY_T0000281;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000281;transcript_name=HG002_chrY_T0000281;gene_name=CD99;ID=exon:HG002_chrY_T0000281:8;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2404157	2404207	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG002_chrY_T0000281;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000281;transcript_name=HG002_chrY_T0000281;gene_name=CD99;ID=CDS:HG002_chrY_T0000281:8;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2404208	2410214	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG002_chrY_T0000281;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000281;transcript_name=HG002_chrY_T0000281;gene_name=CD99;ID=intron:HG002_chrY_T0000281:8;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2410215	2410525	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG002_chrY_T0000281;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000281;transcript_name=HG002_chrY_T0000281;gene_name=CD99;ID=exon:HG002_chrY_T0000281:9;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2410215	2410222	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG002_chrY_T0000281;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000281;transcript_name=HG002_chrY_T0000281;gene_name=CD99;ID=CDS:HG002_chrY_T0000281:9;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	2410220	2410222	.	+	0	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG002_chrY_T0000281;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000281;transcript_name=HG002_chrY_T0000281;gene_name=CD99;ID=stop_codon:HG002_chrY_T0000281;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2368147	2394880	1000	+	.	source_transcript=ENST00000711162.1;source_transcript_name=CD99-227;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711162.1;transcript_score=298.97;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711162.1,ENST00000711162.1;transcript_id=HG002_chrY_T0000282;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_G0000051;transcript_name=HG002_chrY_T0000282;gene_name=CD99;ID=HG002_chrY_T0000282;Name=CD99
HG002_chrY	CAT	exon	2368147	2368282	.	+	.	source_transcript=ENST00000711162.1;source_transcript_name=CD99-227;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711162.1;transcript_score=298.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711162.1,ENST00000711162.1;transcript_id=HG002_chrY_T0000282;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000282;transcript_name=HG002_chrY_T0000282;gene_name=CD99;ID=exon:HG002_chrY_T0000282:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2368283	2391282	.	+	.	source_transcript=ENST00000711162.1;source_transcript_name=CD99-227;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711162.1;transcript_score=298.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711162.1,ENST00000711162.1;transcript_id=HG002_chrY_T0000282;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000282;transcript_name=HG002_chrY_T0000282;gene_name=CD99;ID=intron:HG002_chrY_T0000282:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2391283	2391315	.	+	.	source_transcript=ENST00000711162.1;source_transcript_name=CD99-227;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711162.1;transcript_score=298.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711162.1,ENST00000711162.1;transcript_id=HG002_chrY_T0000282;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000282;transcript_name=HG002_chrY_T0000282;gene_name=CD99;ID=exon:HG002_chrY_T0000282:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2391316	2394469	.	+	.	source_transcript=ENST00000711162.1;source_transcript_name=CD99-227;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711162.1;transcript_score=298.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711162.1,ENST00000711162.1;transcript_id=HG002_chrY_T0000282;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000282;transcript_name=HG002_chrY_T0000282;gene_name=CD99;ID=intron:HG002_chrY_T0000282:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2394470	2394880	.	+	.	source_transcript=ENST00000711162.1;source_transcript_name=CD99-227;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711162.1;transcript_score=298.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711162.1,ENST00000711162.1;transcript_id=HG002_chrY_T0000282;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000282;transcript_name=HG002_chrY_T0000282;gene_name=CD99;ID=exon:HG002_chrY_T0000282:2;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2368150	2418165	100	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG002_chrY_T0000283;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_G0000051;transcript_name=HG002_chrY_T0000283;gene_name=CD99;ID=HG002_chrY_T0000283;Name=CD99
HG002_chrY	CAT	exon	2368150	2368282	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG002_chrY_T0000283;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000283;transcript_name=HG002_chrY_T0000283;gene_name=CD99;ID=exon:HG002_chrY_T0000283:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2368216	2368282	.	+	0	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG002_chrY_T0000283;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000283;transcript_name=HG002_chrY_T0000283;gene_name=CD99;ID=CDS:HG002_chrY_T0000283:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	2368216	2368218	.	+	0	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG002_chrY_T0000283;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000283;transcript_name=HG002_chrY_T0000283;gene_name=CD99;ID=start_codon:HG002_chrY_T0000283;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2368283	2391282	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG002_chrY_T0000283;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000283;transcript_name=HG002_chrY_T0000283;gene_name=CD99;ID=intron:HG002_chrY_T0000283:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2391283	2391315	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG002_chrY_T0000283;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000283;transcript_name=HG002_chrY_T0000283;gene_name=CD99;ID=exon:HG002_chrY_T0000283:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2391283	2391315	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG002_chrY_T0000283;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000283;transcript_name=HG002_chrY_T0000283;gene_name=CD99;ID=CDS:HG002_chrY_T0000283:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2391316	2394469	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG002_chrY_T0000283;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000283;transcript_name=HG002_chrY_T0000283;gene_name=CD99;ID=intron:HG002_chrY_T0000283:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2394470	2394517	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG002_chrY_T0000283;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000283;transcript_name=HG002_chrY_T0000283;gene_name=CD99;ID=exon:HG002_chrY_T0000283:2;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2394470	2394517	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG002_chrY_T0000283;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000283;transcript_name=HG002_chrY_T0000283;gene_name=CD99;ID=CDS:HG002_chrY_T0000283:2;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2394518	2396523	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG002_chrY_T0000283;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000283;transcript_name=HG002_chrY_T0000283;gene_name=CD99;ID=intron:HG002_chrY_T0000283:2;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2396524	2396568	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG002_chrY_T0000283;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000283;transcript_name=HG002_chrY_T0000283;gene_name=CD99;ID=exon:HG002_chrY_T0000283:3;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2396524	2396568	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG002_chrY_T0000283;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000283;transcript_name=HG002_chrY_T0000283;gene_name=CD99;ID=CDS:HG002_chrY_T0000283:3;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2396569	2397218	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG002_chrY_T0000283;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000283;transcript_name=HG002_chrY_T0000283;gene_name=CD99;ID=intron:HG002_chrY_T0000283:3;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2397219	2397287	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG002_chrY_T0000283;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000283;transcript_name=HG002_chrY_T0000283;gene_name=CD99;ID=exon:HG002_chrY_T0000283:4;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2397219	2397287	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG002_chrY_T0000283;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000283;transcript_name=HG002_chrY_T0000283;gene_name=CD99;ID=CDS:HG002_chrY_T0000283:4;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2397288	2399490	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG002_chrY_T0000283;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000283;transcript_name=HG002_chrY_T0000283;gene_name=CD99;ID=intron:HG002_chrY_T0000283:4;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2399491	2399538	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG002_chrY_T0000283;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000283;transcript_name=HG002_chrY_T0000283;gene_name=CD99;ID=exon:HG002_chrY_T0000283:5;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2399491	2399538	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG002_chrY_T0000283;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000283;transcript_name=HG002_chrY_T0000283;gene_name=CD99;ID=CDS:HG002_chrY_T0000283:5;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2399539	2400177	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG002_chrY_T0000283;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000283;transcript_name=HG002_chrY_T0000283;gene_name=CD99;ID=intron:HG002_chrY_T0000283:5;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2400178	2400228	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG002_chrY_T0000283;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000283;transcript_name=HG002_chrY_T0000283;gene_name=CD99;ID=exon:HG002_chrY_T0000283:6;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2400178	2400228	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG002_chrY_T0000283;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000283;transcript_name=HG002_chrY_T0000283;gene_name=CD99;ID=CDS:HG002_chrY_T0000283:6;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2400229	2403123	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG002_chrY_T0000283;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000283;transcript_name=HG002_chrY_T0000283;gene_name=CD99;ID=intron:HG002_chrY_T0000283:6;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2403124	2403237	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG002_chrY_T0000283;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000283;transcript_name=HG002_chrY_T0000283;gene_name=CD99;ID=exon:HG002_chrY_T0000283:7;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2403124	2403237	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG002_chrY_T0000283;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000283;transcript_name=HG002_chrY_T0000283;gene_name=CD99;ID=CDS:HG002_chrY_T0000283:7;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2403238	2415054	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG002_chrY_T0000283;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000283;transcript_name=HG002_chrY_T0000283;gene_name=CD99;ID=intron:HG002_chrY_T0000283:7;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2415055	2415111	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG002_chrY_T0000283;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000283;transcript_name=HG002_chrY_T0000283;gene_name=CD99;ID=exon:HG002_chrY_T0000283:8;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2415055	2415111	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG002_chrY_T0000283;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000283;transcript_name=HG002_chrY_T0000283;gene_name=CD99;ID=CDS:HG002_chrY_T0000283:8;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2415112	2417634	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG002_chrY_T0000283;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000283;transcript_name=HG002_chrY_T0000283;gene_name=CD99;ID=intron:HG002_chrY_T0000283:8;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2417635	2418165	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG002_chrY_T0000283;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000283;transcript_name=HG002_chrY_T0000283;gene_name=CD99;ID=exon:HG002_chrY_T0000283:9;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2417635	2417660	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG002_chrY_T0000283;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000283;transcript_name=HG002_chrY_T0000283;gene_name=CD99;ID=CDS:HG002_chrY_T0000283:9;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	2417658	2417660	.	+	0	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG002_chrY_T0000283;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000283;transcript_name=HG002_chrY_T0000283;gene_name=CD99;ID=stop_codon:HG002_chrY_T0000283;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2368150	2400298	1000	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG002_chrY_T0000284;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_G0000051;transcript_name=HG002_chrY_T0000284;gene_name=CD99;ID=HG002_chrY_T0000284;Name=CD99
HG002_chrY	CAT	exon	2368150	2368282	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG002_chrY_T0000284;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000284;transcript_name=HG002_chrY_T0000284;gene_name=CD99;ID=exon:HG002_chrY_T0000284:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2368283	2391282	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG002_chrY_T0000284;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000284;transcript_name=HG002_chrY_T0000284;gene_name=CD99;ID=intron:HG002_chrY_T0000284:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2391283	2391315	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG002_chrY_T0000284;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000284;transcript_name=HG002_chrY_T0000284;gene_name=CD99;ID=exon:HG002_chrY_T0000284:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2391316	2394469	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG002_chrY_T0000284;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000284;transcript_name=HG002_chrY_T0000284;gene_name=CD99;ID=intron:HG002_chrY_T0000284:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2394470	2394517	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG002_chrY_T0000284;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000284;transcript_name=HG002_chrY_T0000284;gene_name=CD99;ID=exon:HG002_chrY_T0000284:2;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2394518	2396523	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG002_chrY_T0000284;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000284;transcript_name=HG002_chrY_T0000284;gene_name=CD99;ID=intron:HG002_chrY_T0000284:2;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2396524	2396568	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG002_chrY_T0000284;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000284;transcript_name=HG002_chrY_T0000284;gene_name=CD99;ID=exon:HG002_chrY_T0000284:3;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2396569	2397218	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG002_chrY_T0000284;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000284;transcript_name=HG002_chrY_T0000284;gene_name=CD99;ID=intron:HG002_chrY_T0000284:3;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2397219	2397287	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG002_chrY_T0000284;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000284;transcript_name=HG002_chrY_T0000284;gene_name=CD99;ID=exon:HG002_chrY_T0000284:4;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2397288	2399490	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG002_chrY_T0000284;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000284;transcript_name=HG002_chrY_T0000284;gene_name=CD99;ID=intron:HG002_chrY_T0000284:4;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2399491	2399538	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG002_chrY_T0000284;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000284;transcript_name=HG002_chrY_T0000284;gene_name=CD99;ID=exon:HG002_chrY_T0000284:5;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2399539	2400177	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG002_chrY_T0000284;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000284;transcript_name=HG002_chrY_T0000284;gene_name=CD99;ID=intron:HG002_chrY_T0000284:5;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2400178	2400298	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG002_chrY_T0000284;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000284;transcript_name=HG002_chrY_T0000284;gene_name=CD99;ID=exon:HG002_chrY_T0000284:6;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2368165	2410530	100	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG002_chrY_T0000285;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_G0000051;transcript_name=HG002_chrY_T0000285;gene_name=CD99;ID=HG002_chrY_T0000285;Name=CD99
HG002_chrY	CAT	exon	2368165	2368282	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG002_chrY_T0000285;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000285;transcript_name=HG002_chrY_T0000285;gene_name=CD99;ID=exon:HG002_chrY_T0000285:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2368216	2368282	.	+	0	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG002_chrY_T0000285;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000285;transcript_name=HG002_chrY_T0000285;gene_name=CD99;ID=CDS:HG002_chrY_T0000285:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	2368216	2368218	.	+	0	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG002_chrY_T0000285;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000285;transcript_name=HG002_chrY_T0000285;gene_name=CD99;ID=start_codon:HG002_chrY_T0000285;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2368283	2391282	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG002_chrY_T0000285;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000285;transcript_name=HG002_chrY_T0000285;gene_name=CD99;ID=intron:HG002_chrY_T0000285:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2391283	2391315	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG002_chrY_T0000285;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000285;transcript_name=HG002_chrY_T0000285;gene_name=CD99;ID=exon:HG002_chrY_T0000285:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2391283	2391315	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG002_chrY_T0000285;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000285;transcript_name=HG002_chrY_T0000285;gene_name=CD99;ID=CDS:HG002_chrY_T0000285:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2391316	2394469	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG002_chrY_T0000285;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000285;transcript_name=HG002_chrY_T0000285;gene_name=CD99;ID=intron:HG002_chrY_T0000285:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2394470	2394517	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG002_chrY_T0000285;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000285;transcript_name=HG002_chrY_T0000285;gene_name=CD99;ID=exon:HG002_chrY_T0000285:2;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2394470	2394517	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG002_chrY_T0000285;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000285;transcript_name=HG002_chrY_T0000285;gene_name=CD99;ID=CDS:HG002_chrY_T0000285:2;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2394518	2396523	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG002_chrY_T0000285;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000285;transcript_name=HG002_chrY_T0000285;gene_name=CD99;ID=intron:HG002_chrY_T0000285:2;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2396524	2396568	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG002_chrY_T0000285;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000285;transcript_name=HG002_chrY_T0000285;gene_name=CD99;ID=exon:HG002_chrY_T0000285:3;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2396524	2396568	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG002_chrY_T0000285;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000285;transcript_name=HG002_chrY_T0000285;gene_name=CD99;ID=CDS:HG002_chrY_T0000285:3;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2396569	2397218	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG002_chrY_T0000285;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000285;transcript_name=HG002_chrY_T0000285;gene_name=CD99;ID=intron:HG002_chrY_T0000285:3;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2397219	2397287	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG002_chrY_T0000285;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000285;transcript_name=HG002_chrY_T0000285;gene_name=CD99;ID=exon:HG002_chrY_T0000285:4;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2397219	2397287	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG002_chrY_T0000285;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000285;transcript_name=HG002_chrY_T0000285;gene_name=CD99;ID=CDS:HG002_chrY_T0000285:4;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2397288	2399490	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG002_chrY_T0000285;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000285;transcript_name=HG002_chrY_T0000285;gene_name=CD99;ID=intron:HG002_chrY_T0000285:4;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2399491	2399538	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG002_chrY_T0000285;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000285;transcript_name=HG002_chrY_T0000285;gene_name=CD99;ID=exon:HG002_chrY_T0000285:5;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2399491	2399538	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG002_chrY_T0000285;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000285;transcript_name=HG002_chrY_T0000285;gene_name=CD99;ID=CDS:HG002_chrY_T0000285:5;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2399539	2400177	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG002_chrY_T0000285;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000285;transcript_name=HG002_chrY_T0000285;gene_name=CD99;ID=intron:HG002_chrY_T0000285:5;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2400178	2400228	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG002_chrY_T0000285;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000285;transcript_name=HG002_chrY_T0000285;gene_name=CD99;ID=exon:HG002_chrY_T0000285:6;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2400178	2400228	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG002_chrY_T0000285;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000285;transcript_name=HG002_chrY_T0000285;gene_name=CD99;ID=CDS:HG002_chrY_T0000285:6;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2400229	2403123	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG002_chrY_T0000285;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000285;transcript_name=HG002_chrY_T0000285;gene_name=CD99;ID=intron:HG002_chrY_T0000285:6;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2403124	2403237	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG002_chrY_T0000285;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000285;transcript_name=HG002_chrY_T0000285;gene_name=CD99;ID=exon:HG002_chrY_T0000285:7;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2403124	2403237	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG002_chrY_T0000285;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000285;transcript_name=HG002_chrY_T0000285;gene_name=CD99;ID=CDS:HG002_chrY_T0000285:7;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2403238	2410214	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG002_chrY_T0000285;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000285;transcript_name=HG002_chrY_T0000285;gene_name=CD99;ID=intron:HG002_chrY_T0000285:7;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2410215	2410530	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG002_chrY_T0000285;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000285;transcript_name=HG002_chrY_T0000285;gene_name=CD99;ID=exon:HG002_chrY_T0000285:8;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2410215	2410222	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG002_chrY_T0000285;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000285;transcript_name=HG002_chrY_T0000285;gene_name=CD99;ID=CDS:HG002_chrY_T0000285:8;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	2410220	2410222	.	+	0	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG002_chrY_T0000285;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000285;transcript_name=HG002_chrY_T0000285;gene_name=CD99;ID=stop_codon:HG002_chrY_T0000285;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2368168	2418146	100	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG002_chrY_T0000286;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_G0000051;transcript_name=HG002_chrY_T0000286;gene_name=CD99;ID=HG002_chrY_T0000286;Name=CD99
HG002_chrY	CAT	exon	2368168	2368282	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG002_chrY_T0000286;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000286;transcript_name=HG002_chrY_T0000286;gene_name=CD99;ID=exon:HG002_chrY_T0000286:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2368216	2368282	.	+	0	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG002_chrY_T0000286;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000286;transcript_name=HG002_chrY_T0000286;gene_name=CD99;ID=CDS:HG002_chrY_T0000286:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	2368216	2368218	.	+	0	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG002_chrY_T0000286;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000286;transcript_name=HG002_chrY_T0000286;gene_name=CD99;ID=start_codon:HG002_chrY_T0000286;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2368283	2391282	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG002_chrY_T0000286;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000286;transcript_name=HG002_chrY_T0000286;gene_name=CD99;ID=intron:HG002_chrY_T0000286:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2391283	2391315	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG002_chrY_T0000286;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000286;transcript_name=HG002_chrY_T0000286;gene_name=CD99;ID=exon:HG002_chrY_T0000286:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2391283	2391315	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG002_chrY_T0000286;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000286;transcript_name=HG002_chrY_T0000286;gene_name=CD99;ID=CDS:HG002_chrY_T0000286:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2391316	2394469	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG002_chrY_T0000286;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000286;transcript_name=HG002_chrY_T0000286;gene_name=CD99;ID=intron:HG002_chrY_T0000286:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2394470	2394517	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG002_chrY_T0000286;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000286;transcript_name=HG002_chrY_T0000286;gene_name=CD99;ID=exon:HG002_chrY_T0000286:2;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2394470	2394517	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG002_chrY_T0000286;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000286;transcript_name=HG002_chrY_T0000286;gene_name=CD99;ID=CDS:HG002_chrY_T0000286:2;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2394518	2396523	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG002_chrY_T0000286;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000286;transcript_name=HG002_chrY_T0000286;gene_name=CD99;ID=intron:HG002_chrY_T0000286:2;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2396524	2396568	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG002_chrY_T0000286;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000286;transcript_name=HG002_chrY_T0000286;gene_name=CD99;ID=exon:HG002_chrY_T0000286:3;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2396524	2396568	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG002_chrY_T0000286;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000286;transcript_name=HG002_chrY_T0000286;gene_name=CD99;ID=CDS:HG002_chrY_T0000286:3;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2396569	2397218	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG002_chrY_T0000286;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000286;transcript_name=HG002_chrY_T0000286;gene_name=CD99;ID=intron:HG002_chrY_T0000286:3;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2397219	2397287	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG002_chrY_T0000286;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000286;transcript_name=HG002_chrY_T0000286;gene_name=CD99;ID=exon:HG002_chrY_T0000286:4;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2397219	2397287	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG002_chrY_T0000286;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000286;transcript_name=HG002_chrY_T0000286;gene_name=CD99;ID=CDS:HG002_chrY_T0000286:4;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2397288	2399490	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG002_chrY_T0000286;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000286;transcript_name=HG002_chrY_T0000286;gene_name=CD99;ID=intron:HG002_chrY_T0000286:4;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2399491	2399538	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG002_chrY_T0000286;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000286;transcript_name=HG002_chrY_T0000286;gene_name=CD99;ID=exon:HG002_chrY_T0000286:5;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2399491	2399538	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG002_chrY_T0000286;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000286;transcript_name=HG002_chrY_T0000286;gene_name=CD99;ID=CDS:HG002_chrY_T0000286:5;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2399539	2400177	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG002_chrY_T0000286;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000286;transcript_name=HG002_chrY_T0000286;gene_name=CD99;ID=intron:HG002_chrY_T0000286:5;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2400178	2400228	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG002_chrY_T0000286;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000286;transcript_name=HG002_chrY_T0000286;gene_name=CD99;ID=exon:HG002_chrY_T0000286:6;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2400178	2400228	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG002_chrY_T0000286;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000286;transcript_name=HG002_chrY_T0000286;gene_name=CD99;ID=CDS:HG002_chrY_T0000286:6;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2400229	2403123	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG002_chrY_T0000286;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000286;transcript_name=HG002_chrY_T0000286;gene_name=CD99;ID=intron:HG002_chrY_T0000286:6;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2403124	2403237	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG002_chrY_T0000286;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000286;transcript_name=HG002_chrY_T0000286;gene_name=CD99;ID=exon:HG002_chrY_T0000286:7;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2403124	2403237	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG002_chrY_T0000286;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000286;transcript_name=HG002_chrY_T0000286;gene_name=CD99;ID=CDS:HG002_chrY_T0000286:7;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2403238	2415057	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG002_chrY_T0000286;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000286;transcript_name=HG002_chrY_T0000286;gene_name=CD99;ID=intron:HG002_chrY_T0000286:7;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2415058	2415111	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG002_chrY_T0000286;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000286;transcript_name=HG002_chrY_T0000286;gene_name=CD99;ID=exon:HG002_chrY_T0000286:8;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2415058	2415111	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG002_chrY_T0000286;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000286;transcript_name=HG002_chrY_T0000286;gene_name=CD99;ID=CDS:HG002_chrY_T0000286:8;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2415112	2417634	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG002_chrY_T0000286;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000286;transcript_name=HG002_chrY_T0000286;gene_name=CD99;ID=intron:HG002_chrY_T0000286:8;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2417635	2418146	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG002_chrY_T0000286;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000286;transcript_name=HG002_chrY_T0000286;gene_name=CD99;ID=exon:HG002_chrY_T0000286:9;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2417635	2417660	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG002_chrY_T0000286;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000286;transcript_name=HG002_chrY_T0000286;gene_name=CD99;ID=CDS:HG002_chrY_T0000286:9;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	2417658	2417660	.	+	0	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG002_chrY_T0000286;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000286;transcript_name=HG002_chrY_T0000286;gene_name=CD99;ID=stop_codon:HG002_chrY_T0000286;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2368181	2392459	1000	+	.	source_transcript=ENST00000711157.1;source_transcript_name=CD99-222;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711157.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711157.1;transcript_score=299.844;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711157.1,ENST00000711157.1;transcript_id=HG002_chrY_T0000287;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_G0000051;transcript_name=HG002_chrY_T0000287;gene_name=CD99;ID=HG002_chrY_T0000287;Name=CD99
HG002_chrY	CAT	exon	2368181	2368282	.	+	.	source_transcript=ENST00000711157.1;source_transcript_name=CD99-222;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711157.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711157.1;transcript_score=299.844;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711157.1,ENST00000711157.1;transcript_id=HG002_chrY_T0000287;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000287;transcript_name=HG002_chrY_T0000287;gene_name=CD99;ID=exon:HG002_chrY_T0000287:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2368283	2391282	.	+	.	source_transcript=ENST00000711157.1;source_transcript_name=CD99-222;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711157.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711157.1;transcript_score=299.844;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711157.1,ENST00000711157.1;transcript_id=HG002_chrY_T0000287;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000287;transcript_name=HG002_chrY_T0000287;gene_name=CD99;ID=intron:HG002_chrY_T0000287:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2391283	2392459	.	+	.	source_transcript=ENST00000711157.1;source_transcript_name=CD99-222;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711157.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711157.1;transcript_score=299.844;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711157.1,ENST00000711157.1;transcript_id=HG002_chrY_T0000287;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000287;transcript_name=HG002_chrY_T0000287;gene_name=CD99;ID=exon:HG002_chrY_T0000287:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2368216	2369108	100	+	.	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=HG002_chrY_T0000288;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_G0000051;transcript_name=HG002_chrY_T0000288;gene_name=CD99;ID=HG002_chrY_T0000288;Name=CD99
HG002_chrY	CAT	exon	2368216	2368282	.	+	.	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=HG002_chrY_T0000288;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000288;transcript_name=HG002_chrY_T0000288;gene_name=CD99;ID=exon:HG002_chrY_T0000288:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2368216	2368282	.	+	0	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=HG002_chrY_T0000288;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000288;transcript_name=HG002_chrY_T0000288;gene_name=CD99;ID=CDS:HG002_chrY_T0000288:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	2368216	2368218	.	+	0	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=HG002_chrY_T0000288;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000288;transcript_name=HG002_chrY_T0000288;gene_name=CD99;ID=start_codon:HG002_chrY_T0000288;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2368283	2368642	.	+	.	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=HG002_chrY_T0000288;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000288;transcript_name=HG002_chrY_T0000288;gene_name=CD99;ID=intron:HG002_chrY_T0000288:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2368643	2369108	.	+	.	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=HG002_chrY_T0000288;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000288;transcript_name=HG002_chrY_T0000288;gene_name=CD99;ID=exon:HG002_chrY_T0000288:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2368643	2368806	.	+	2	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=HG002_chrY_T0000288;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000288;transcript_name=HG002_chrY_T0000288;gene_name=CD99;ID=CDS:HG002_chrY_T0000288:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	2368804	2368806	.	+	0	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=HG002_chrY_T0000288;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000288;transcript_name=HG002_chrY_T0000288;gene_name=CD99;ID=stop_codon:HG002_chrY_T0000288;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2368216	2417660	1000	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_G0000051;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=HG002_chrY_T0000289;Name=CD99
HG002_chrY	CAT	exon	2368216	2368282	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000289;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=exon:HG002_chrY_T0000289:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2368216	2368282	.	+	0	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000289;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=CDS:HG002_chrY_T0000289:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	2368216	2368218	.	+	0	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000289;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=start_codon:HG002_chrY_T0000289;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2368283	2391282	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000289;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=intron:HG002_chrY_T0000289:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2391283	2391315	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000289;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=exon:HG002_chrY_T0000289:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2391283	2391315	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000289;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=CDS:HG002_chrY_T0000289:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2391316	2394469	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000289;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=intron:HG002_chrY_T0000289:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2394470	2394517	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000289;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=exon:HG002_chrY_T0000289:2;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2394470	2394517	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000289;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=CDS:HG002_chrY_T0000289:2;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2394518	2396523	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000289;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=intron:HG002_chrY_T0000289:2;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2396524	2396568	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000289;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=exon:HG002_chrY_T0000289:3;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2396524	2396568	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000289;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=CDS:HG002_chrY_T0000289:3;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2396569	2397218	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000289;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=intron:HG002_chrY_T0000289:3;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2397219	2397287	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000289;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=exon:HG002_chrY_T0000289:4;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2397219	2397287	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000289;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=CDS:HG002_chrY_T0000289:4;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2397288	2399490	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000289;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=intron:HG002_chrY_T0000289:4;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2399491	2399538	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000289;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=exon:HG002_chrY_T0000289:5;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2399491	2399538	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000289;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=CDS:HG002_chrY_T0000289:5;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2399539	2400177	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000289;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=intron:HG002_chrY_T0000289:5;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2400178	2400228	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000289;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=exon:HG002_chrY_T0000289:6;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2400178	2400228	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000289;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=CDS:HG002_chrY_T0000289:6;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2400229	2403123	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000289;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=intron:HG002_chrY_T0000289:6;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2403124	2403237	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000289;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=exon:HG002_chrY_T0000289:7;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2403124	2403237	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000289;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=CDS:HG002_chrY_T0000289:7;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2403238	2410214	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000289;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=intron:HG002_chrY_T0000289:7;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2410215	2410232	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000289;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=exon:HG002_chrY_T0000289:8;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2410215	2410222	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000289;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=CDS:HG002_chrY_T0000289:8;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	2410220	2410222	.	+	0	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000289;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=stop_codon:HG002_chrY_T0000289;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2410233	2415057	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000289;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=intron:HG002_chrY_T0000289:8;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2415058	2415111	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000289;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=exon:HG002_chrY_T0000289:9;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2415112	2417634	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000289;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=intron:HG002_chrY_T0000289:9;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2417635	2417660	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG002_chrY_T0000289;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000289;transcript_name=HG002_chrY_T0000289;gene_name=CD99;ID=exon:HG002_chrY_T0000289:10;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2368355	2403237	1000	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG002_chrY_T0000290;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_G0000051;transcript_name=HG002_chrY_T0000290;gene_name=CD99;ID=HG002_chrY_T0000290;Name=CD99
HG002_chrY	CAT	exon	2368355	2368550	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG002_chrY_T0000290;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000290;transcript_name=HG002_chrY_T0000290;gene_name=CD99;ID=exon:HG002_chrY_T0000290:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2368551	2391282	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG002_chrY_T0000290;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000290;transcript_name=HG002_chrY_T0000290;gene_name=CD99;ID=intron:HG002_chrY_T0000290:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2391283	2391315	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG002_chrY_T0000290;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000290;transcript_name=HG002_chrY_T0000290;gene_name=CD99;ID=exon:HG002_chrY_T0000290:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2391316	2394469	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG002_chrY_T0000290;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000290;transcript_name=HG002_chrY_T0000290;gene_name=CD99;ID=intron:HG002_chrY_T0000290:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2394470	2394517	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG002_chrY_T0000290;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000290;transcript_name=HG002_chrY_T0000290;gene_name=CD99;ID=exon:HG002_chrY_T0000290:2;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2394518	2396523	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG002_chrY_T0000290;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000290;transcript_name=HG002_chrY_T0000290;gene_name=CD99;ID=intron:HG002_chrY_T0000290:2;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2396524	2396568	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG002_chrY_T0000290;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000290;transcript_name=HG002_chrY_T0000290;gene_name=CD99;ID=exon:HG002_chrY_T0000290:3;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2396569	2397218	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG002_chrY_T0000290;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000290;transcript_name=HG002_chrY_T0000290;gene_name=CD99;ID=intron:HG002_chrY_T0000290:3;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2397219	2397287	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG002_chrY_T0000290;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000290;transcript_name=HG002_chrY_T0000290;gene_name=CD99;ID=exon:HG002_chrY_T0000290:4;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2397288	2399490	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG002_chrY_T0000290;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000290;transcript_name=HG002_chrY_T0000290;gene_name=CD99;ID=intron:HG002_chrY_T0000290:4;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2399491	2399538	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG002_chrY_T0000290;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000290;transcript_name=HG002_chrY_T0000290;gene_name=CD99;ID=exon:HG002_chrY_T0000290:5;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2399539	2400177	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG002_chrY_T0000290;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000290;transcript_name=HG002_chrY_T0000290;gene_name=CD99;ID=intron:HG002_chrY_T0000290:5;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2400178	2400228	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG002_chrY_T0000290;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000290;transcript_name=HG002_chrY_T0000290;gene_name=CD99;ID=exon:HG002_chrY_T0000290:6;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2400229	2403123	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG002_chrY_T0000290;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000290;transcript_name=HG002_chrY_T0000290;gene_name=CD99;ID=intron:HG002_chrY_T0000290:6;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2403124	2403237	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG002_chrY_T0000290;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000290;transcript_name=HG002_chrY_T0000290;gene_name=CD99;ID=exon:HG002_chrY_T0000290:7;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2394239	2403227	1000	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG002_chrY_T0000291;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_G0000051;transcript_name=HG002_chrY_T0000291;gene_name=CD99;ID=HG002_chrY_T0000291;Name=CD99
HG002_chrY	CAT	exon	2394239	2394339	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG002_chrY_T0000291;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000291;transcript_name=HG002_chrY_T0000291;gene_name=CD99;ID=exon:HG002_chrY_T0000291:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2394340	2394469	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG002_chrY_T0000291;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000291;transcript_name=HG002_chrY_T0000291;gene_name=CD99;ID=intron:HG002_chrY_T0000291:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2394470	2394517	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG002_chrY_T0000291;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000291;transcript_name=HG002_chrY_T0000291;gene_name=CD99;ID=exon:HG002_chrY_T0000291:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2394518	2396523	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG002_chrY_T0000291;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000291;transcript_name=HG002_chrY_T0000291;gene_name=CD99;ID=intron:HG002_chrY_T0000291:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2396524	2396568	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG002_chrY_T0000291;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000291;transcript_name=HG002_chrY_T0000291;gene_name=CD99;ID=exon:HG002_chrY_T0000291:2;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2396569	2397218	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG002_chrY_T0000291;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000291;transcript_name=HG002_chrY_T0000291;gene_name=CD99;ID=intron:HG002_chrY_T0000291:2;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2397219	2397287	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG002_chrY_T0000291;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000291;transcript_name=HG002_chrY_T0000291;gene_name=CD99;ID=exon:HG002_chrY_T0000291:3;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2397288	2399490	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG002_chrY_T0000291;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000291;transcript_name=HG002_chrY_T0000291;gene_name=CD99;ID=intron:HG002_chrY_T0000291:3;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2399491	2399538	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG002_chrY_T0000291;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000291;transcript_name=HG002_chrY_T0000291;gene_name=CD99;ID=exon:HG002_chrY_T0000291:4;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2399539	2400177	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG002_chrY_T0000291;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000291;transcript_name=HG002_chrY_T0000291;gene_name=CD99;ID=intron:HG002_chrY_T0000291:4;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2400178	2400228	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG002_chrY_T0000291;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000291;transcript_name=HG002_chrY_T0000291;gene_name=CD99;ID=exon:HG002_chrY_T0000291:5;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2400229	2403123	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG002_chrY_T0000291;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000291;transcript_name=HG002_chrY_T0000291;gene_name=CD99;ID=intron:HG002_chrY_T0000291:5;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2403124	2403227	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG002_chrY_T0000291;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000291;transcript_name=HG002_chrY_T0000291;gene_name=CD99;ID=exon:HG002_chrY_T0000291:6;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2395930	2403132	1000	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=HG002_chrY_T0000292;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_G0000051;transcript_name=HG002_chrY_T0000292;gene_name=CD99;ID=HG002_chrY_T0000292;Name=CD99
HG002_chrY	CAT	exon	2395930	2396568	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=HG002_chrY_T0000292;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000292;transcript_name=HG002_chrY_T0000292;gene_name=CD99;ID=exon:HG002_chrY_T0000292:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2396569	2397218	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=HG002_chrY_T0000292;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000292;transcript_name=HG002_chrY_T0000292;gene_name=CD99;ID=intron:HG002_chrY_T0000292:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2397219	2397287	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=HG002_chrY_T0000292;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000292;transcript_name=HG002_chrY_T0000292;gene_name=CD99;ID=exon:HG002_chrY_T0000292:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2397288	2399490	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=HG002_chrY_T0000292;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000292;transcript_name=HG002_chrY_T0000292;gene_name=CD99;ID=intron:HG002_chrY_T0000292:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2399491	2399538	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=HG002_chrY_T0000292;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000292;transcript_name=HG002_chrY_T0000292;gene_name=CD99;ID=exon:HG002_chrY_T0000292:2;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2399539	2400177	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=HG002_chrY_T0000292;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000292;transcript_name=HG002_chrY_T0000292;gene_name=CD99;ID=intron:HG002_chrY_T0000292:2;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2400178	2400228	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=HG002_chrY_T0000292;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000292;transcript_name=HG002_chrY_T0000292;gene_name=CD99;ID=exon:HG002_chrY_T0000292:3;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2400229	2403123	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=HG002_chrY_T0000292;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000292;transcript_name=HG002_chrY_T0000292;gene_name=CD99;ID=intron:HG002_chrY_T0000292:3;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2403124	2403132	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=HG002_chrY_T0000292;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000292;transcript_name=HG002_chrY_T0000292;gene_name=CD99;ID=exon:HG002_chrY_T0000292:4;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2403205	2417981	1000	+	.	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=HG002_chrY_T0000293;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_G0000051;transcript_name=HG002_chrY_T0000293;gene_name=CD99;ID=HG002_chrY_T0000293;Name=CD99
HG002_chrY	CAT	exon	2403205	2403237	.	+	.	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=HG002_chrY_T0000293;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000293;transcript_name=HG002_chrY_T0000293;gene_name=CD99;ID=exon:HG002_chrY_T0000293:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2403205	2403237	.	+	2	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=HG002_chrY_T0000293;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000293;transcript_name=HG002_chrY_T0000293;gene_name=CD99;ID=CDS:HG002_chrY_T0000293:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2403238	2414735	.	+	.	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=HG002_chrY_T0000293;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000293;transcript_name=HG002_chrY_T0000293;gene_name=CD99;ID=intron:HG002_chrY_T0000293:0;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2414736	2415111	.	+	.	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=HG002_chrY_T0000293;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000293;transcript_name=HG002_chrY_T0000293;gene_name=CD99;ID=exon:HG002_chrY_T0000293:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2414736	2414770	.	+	2	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=HG002_chrY_T0000293;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000293;transcript_name=HG002_chrY_T0000293;gene_name=CD99;ID=CDS:HG002_chrY_T0000293:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	2414768	2414770	.	+	0	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=HG002_chrY_T0000293;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000293;transcript_name=HG002_chrY_T0000293;gene_name=CD99;ID=stop_codon:HG002_chrY_T0000293;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2415112	2417634	.	+	.	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=HG002_chrY_T0000293;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000293;transcript_name=HG002_chrY_T0000293;gene_name=CD99;ID=intron:HG002_chrY_T0000293:1;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2417635	2417981	.	+	.	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=HG002_chrY_T0000293;gene_id=HG002_chrY_G0000051;Parent=HG002_chrY_T0000293;transcript_name=HG002_chrY_T0000293;gene_name=CD99;ID=exon:HG002_chrY_T0000293:2;Name=CD99;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	2428980	2531368	.	+	.	source_gene_common_name=XGY2;source_gene=ENSG00000290840.2;gene_id=HG002_chrY_G0000052;gene_biotype=lncRNA;gene_name=XGY2;gene_sources=liftoff;ID=HG002_chrY_G0000052;Name=XGY2
HG002_chrY	CAT	transcript	2428980	2467656	1000	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000294;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_G0000052;transcript_name=HG002_chrY_T0000294;gene_name=XGY2;ID=HG002_chrY_T0000294;Name=XGY2
HG002_chrY	CAT	exon	2428980	2429232	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000294;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000294;transcript_name=HG002_chrY_T0000294;gene_name=XGY2;ID=exon:HG002_chrY_T0000294:0;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2429233	2447431	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000294;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000294;transcript_name=HG002_chrY_T0000294;gene_name=XGY2;ID=intron:HG002_chrY_T0000294:0;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2447432	2447473	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000294;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000294;transcript_name=HG002_chrY_T0000294;gene_name=XGY2;ID=exon:HG002_chrY_T0000294:1;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2447474	2451453	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000294;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000294;transcript_name=HG002_chrY_T0000294;gene_name=XGY2;ID=intron:HG002_chrY_T0000294:1;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2451454	2451477	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000294;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000294;transcript_name=HG002_chrY_T0000294;gene_name=XGY2;ID=exon:HG002_chrY_T0000294:2;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2451478	2466483	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000294;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000294;transcript_name=HG002_chrY_T0000294;gene_name=XGY2;ID=intron:HG002_chrY_T0000294:2;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2466484	2467656	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000294;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000294;transcript_name=HG002_chrY_T0000294;gene_name=XGY2;ID=exon:HG002_chrY_T0000294:3;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2429193	2522415	1000	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000295;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_G0000052;transcript_name=HG002_chrY_T0000295;gene_name=XGY2;ID=HG002_chrY_T0000295;Name=XGY2
HG002_chrY	CAT	exon	2429193	2429232	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000295;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000295;transcript_name=HG002_chrY_T0000295;gene_name=XGY2;ID=exon:HG002_chrY_T0000295:0;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2429233	2447431	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000295;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000295;transcript_name=HG002_chrY_T0000295;gene_name=XGY2;ID=intron:HG002_chrY_T0000295:0;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2447432	2447473	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000295;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000295;transcript_name=HG002_chrY_T0000295;gene_name=XGY2;ID=exon:HG002_chrY_T0000295:1;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2447474	2451453	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000295;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000295;transcript_name=HG002_chrY_T0000295;gene_name=XGY2;ID=intron:HG002_chrY_T0000295:1;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2451454	2451477	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000295;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000295;transcript_name=HG002_chrY_T0000295;gene_name=XGY2;ID=exon:HG002_chrY_T0000295:2;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2451478	2518211	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000295;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000295;transcript_name=HG002_chrY_T0000295;gene_name=XGY2;ID=intron:HG002_chrY_T0000295:2;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2518212	2518353	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000295;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000295;transcript_name=HG002_chrY_T0000295;gene_name=XGY2;ID=exon:HG002_chrY_T0000295:3;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2518354	2518890	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000295;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000295;transcript_name=HG002_chrY_T0000295;gene_name=XGY2;ID=intron:HG002_chrY_T0000295:3;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2518891	2518968	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000295;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000295;transcript_name=HG002_chrY_T0000295;gene_name=XGY2;ID=exon:HG002_chrY_T0000295:4;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2518969	2520802	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000295;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000295;transcript_name=HG002_chrY_T0000295;gene_name=XGY2;ID=intron:HG002_chrY_T0000295:4;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2520803	2520983	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000295;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000295;transcript_name=HG002_chrY_T0000295;gene_name=XGY2;ID=exon:HG002_chrY_T0000295:5;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2520984	2522371	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000295;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000295;transcript_name=HG002_chrY_T0000295;gene_name=XGY2;ID=intron:HG002_chrY_T0000295:5;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2522372	2522415	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000295;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000295;transcript_name=HG002_chrY_T0000295;gene_name=XGY2;ID=exon:HG002_chrY_T0000295:6;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2429193	2451734	1000	+	.	source_transcript=ENST00000680009.1;source_transcript_name=XGY2-203;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680009.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000296;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_G0000052;transcript_name=HG002_chrY_T0000296;gene_name=XGY2;ID=HG002_chrY_T0000296;Name=XGY2
HG002_chrY	CAT	exon	2429193	2429232	.	+	.	source_transcript=ENST00000680009.1;source_transcript_name=XGY2-203;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000296;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000296;transcript_name=HG002_chrY_T0000296;gene_name=XGY2;ID=exon:HG002_chrY_T0000296:0;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2429233	2447431	.	+	.	source_transcript=ENST00000680009.1;source_transcript_name=XGY2-203;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000296;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000296;transcript_name=HG002_chrY_T0000296;gene_name=XGY2;ID=intron:HG002_chrY_T0000296:0;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2447432	2447473	.	+	.	source_transcript=ENST00000680009.1;source_transcript_name=XGY2-203;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000296;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000296;transcript_name=HG002_chrY_T0000296;gene_name=XGY2;ID=exon:HG002_chrY_T0000296:1;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2447474	2451453	.	+	.	source_transcript=ENST00000680009.1;source_transcript_name=XGY2-203;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000296;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000296;transcript_name=HG002_chrY_T0000296;gene_name=XGY2;ID=intron:HG002_chrY_T0000296:1;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2451454	2451734	.	+	.	source_transcript=ENST00000680009.1;source_transcript_name=XGY2-203;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000296;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000296;transcript_name=HG002_chrY_T0000296;gene_name=XGY2;ID=exon:HG002_chrY_T0000296:2;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2429193	2531368	1000	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000297;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_G0000052;transcript_name=HG002_chrY_T0000297;gene_name=XGY2;ID=HG002_chrY_T0000297;Name=XGY2
HG002_chrY	CAT	exon	2429193	2429232	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000297;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000297;transcript_name=HG002_chrY_T0000297;gene_name=XGY2;ID=exon:HG002_chrY_T0000297:0;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2429233	2447431	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000297;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000297;transcript_name=HG002_chrY_T0000297;gene_name=XGY2;ID=intron:HG002_chrY_T0000297:0;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2447432	2447473	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000297;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000297;transcript_name=HG002_chrY_T0000297;gene_name=XGY2;ID=exon:HG002_chrY_T0000297:1;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2447474	2451453	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000297;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000297;transcript_name=HG002_chrY_T0000297;gene_name=XGY2;ID=intron:HG002_chrY_T0000297:1;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2451454	2451477	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000297;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000297;transcript_name=HG002_chrY_T0000297;gene_name=XGY2;ID=exon:HG002_chrY_T0000297:2;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2451478	2522371	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000297;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000297;transcript_name=HG002_chrY_T0000297;gene_name=XGY2;ID=intron:HG002_chrY_T0000297:2;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2522372	2522469	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000297;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000297;transcript_name=HG002_chrY_T0000297;gene_name=XGY2;ID=exon:HG002_chrY_T0000297:3;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2522470	2531326	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000297;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000297;transcript_name=HG002_chrY_T0000297;gene_name=XGY2;ID=intron:HG002_chrY_T0000297:3;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2531327	2531368	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000297;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000297;transcript_name=HG002_chrY_T0000297;gene_name=XGY2;ID=exon:HG002_chrY_T0000297:4;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2429193	2522415	1000	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000298;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_G0000052;transcript_name=HG002_chrY_T0000298;gene_name=XGY2;ID=HG002_chrY_T0000298;Name=XGY2
HG002_chrY	CAT	exon	2429193	2429232	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000298;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000298;transcript_name=HG002_chrY_T0000298;gene_name=XGY2;ID=exon:HG002_chrY_T0000298:0;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2429233	2447431	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000298;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000298;transcript_name=HG002_chrY_T0000298;gene_name=XGY2;ID=intron:HG002_chrY_T0000298:0;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2447432	2447473	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000298;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000298;transcript_name=HG002_chrY_T0000298;gene_name=XGY2;ID=exon:HG002_chrY_T0000298:1;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2447474	2451453	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000298;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000298;transcript_name=HG002_chrY_T0000298;gene_name=XGY2;ID=intron:HG002_chrY_T0000298:1;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2451454	2451477	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000298;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000298;transcript_name=HG002_chrY_T0000298;gene_name=XGY2;ID=exon:HG002_chrY_T0000298:2;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2451478	2517753	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000298;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000298;transcript_name=HG002_chrY_T0000298;gene_name=XGY2;ID=intron:HG002_chrY_T0000298:2;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2517754	2517809	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000298;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000298;transcript_name=HG002_chrY_T0000298;gene_name=XGY2;ID=exon:HG002_chrY_T0000298:3;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2517810	2518211	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000298;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000298;transcript_name=HG002_chrY_T0000298;gene_name=XGY2;ID=intron:HG002_chrY_T0000298:3;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2518212	2518353	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000298;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000298;transcript_name=HG002_chrY_T0000298;gene_name=XGY2;ID=exon:HG002_chrY_T0000298:4;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2518354	2518890	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000298;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000298;transcript_name=HG002_chrY_T0000298;gene_name=XGY2;ID=intron:HG002_chrY_T0000298:4;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2518891	2518968	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000298;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000298;transcript_name=HG002_chrY_T0000298;gene_name=XGY2;ID=exon:HG002_chrY_T0000298:5;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2518969	2520802	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000298;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000298;transcript_name=HG002_chrY_T0000298;gene_name=XGY2;ID=intron:HG002_chrY_T0000298:5;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2520803	2520983	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000298;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000298;transcript_name=HG002_chrY_T0000298;gene_name=XGY2;ID=exon:HG002_chrY_T0000298:6;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2520984	2522371	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000298;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000298;transcript_name=HG002_chrY_T0000298;gene_name=XGY2;ID=intron:HG002_chrY_T0000298:6;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2522372	2522415	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000298;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000298;transcript_name=HG002_chrY_T0000298;gene_name=XGY2;ID=exon:HG002_chrY_T0000298:7;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2429193	2464305	1000	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000299;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_G0000052;transcript_name=HG002_chrY_T0000299;gene_name=XGY2;ID=HG002_chrY_T0000299;Name=XGY2
HG002_chrY	CAT	exon	2429193	2429232	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000299;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000299;transcript_name=HG002_chrY_T0000299;gene_name=XGY2;ID=exon:HG002_chrY_T0000299:0;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2429233	2447431	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000299;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000299;transcript_name=HG002_chrY_T0000299;gene_name=XGY2;ID=intron:HG002_chrY_T0000299:0;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2447432	2447473	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000299;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000299;transcript_name=HG002_chrY_T0000299;gene_name=XGY2;ID=exon:HG002_chrY_T0000299:1;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2447474	2451453	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000299;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000299;transcript_name=HG002_chrY_T0000299;gene_name=XGY2;ID=intron:HG002_chrY_T0000299:1;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2451454	2451477	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000299;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000299;transcript_name=HG002_chrY_T0000299;gene_name=XGY2;ID=exon:HG002_chrY_T0000299:2;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2451478	2463729	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000299;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000299;transcript_name=HG002_chrY_T0000299;gene_name=XGY2;ID=intron:HG002_chrY_T0000299:2;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2463730	2464305	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000299;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000299;transcript_name=HG002_chrY_T0000299;gene_name=XGY2;ID=exon:HG002_chrY_T0000299:3;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2429193	2464369	1000	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000300;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_G0000052;transcript_name=HG002_chrY_T0000300;gene_name=XGY2;ID=HG002_chrY_T0000300;Name=XGY2
HG002_chrY	CAT	exon	2429193	2429232	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000300;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000300;transcript_name=HG002_chrY_T0000300;gene_name=XGY2;ID=exon:HG002_chrY_T0000300:0;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2429233	2447431	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000300;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000300;transcript_name=HG002_chrY_T0000300;gene_name=XGY2;ID=intron:HG002_chrY_T0000300:0;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2447432	2447473	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000300;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000300;transcript_name=HG002_chrY_T0000300;gene_name=XGY2;ID=exon:HG002_chrY_T0000300:1;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2447474	2451453	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000300;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000300;transcript_name=HG002_chrY_T0000300;gene_name=XGY2;ID=intron:HG002_chrY_T0000300:1;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2451454	2451477	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000300;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000300;transcript_name=HG002_chrY_T0000300;gene_name=XGY2;ID=exon:HG002_chrY_T0000300:2;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2451478	2463729	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000300;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000300;transcript_name=HG002_chrY_T0000300;gene_name=XGY2;ID=intron:HG002_chrY_T0000300:2;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2463730	2463788	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000300;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000300;transcript_name=HG002_chrY_T0000300;gene_name=XGY2;ID=exon:HG002_chrY_T0000300:3;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2463789	2464214	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000300;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000300;transcript_name=HG002_chrY_T0000300;gene_name=XGY2;ID=intron:HG002_chrY_T0000300:3;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2464215	2464369	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000300;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000300;transcript_name=HG002_chrY_T0000300;gene_name=XGY2;ID=exon:HG002_chrY_T0000300:4;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2463730	2467497	1000	+	.	source_transcript=ENST00000819779.1;source_transcript_name=XGY2-208;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000819779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000819779.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000304;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_G0000052;transcript_name=HG002_chrY_T0000304;gene_name=XGY2;ID=HG002_chrY_T0000304;Name=XGY2
HG002_chrY	CAT	exon	2463730	2463788	.	+	.	source_transcript=ENST00000819779.1;source_transcript_name=XGY2-208;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000819779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000819779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000304;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000304;transcript_name=HG002_chrY_T0000304;gene_name=XGY2;ID=exon:HG002_chrY_T0000304:0;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2463789	2466483	.	+	.	source_transcript=ENST00000819779.1;source_transcript_name=XGY2-208;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000819779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000819779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000304;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000304;transcript_name=HG002_chrY_T0000304;gene_name=XGY2;ID=intron:HG002_chrY_T0000304:0;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2466484	2467497	.	+	.	source_transcript=ENST00000819779.1;source_transcript_name=XGY2-208;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000819779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000819779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG002_chrY_T0000304;gene_id=HG002_chrY_G0000052;Parent=HG002_chrY_T0000304;transcript_name=HG002_chrY_T0000304;gene_name=XGY2;ID=exon:HG002_chrY_T0000304:1;Name=XGY2;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	2429193	2451477	.	+	.	source_gene_common_name=ENSG00000288686;source_gene=ENSG00000288686.1;gene_id=HG002_chrY_G0000053;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000288686;gene_sources=liftoff;ID=HG002_chrY_G0000053;Name=ENSG00000288686
HG002_chrY	CAT	transcript	2429193	2451477	1000	+	.	source_transcript=ENST00000683447.1;source_transcript_name=ENST00000683447;source_gene=ENSG00000288686.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000288686.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000683447.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000683447.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288686;transcript_id=HG002_chrY_T0000301;gene_id=HG002_chrY_G0000053;Parent=HG002_chrY_G0000053;transcript_name=HG002_chrY_T0000301;gene_name=ENSG00000288686;ID=HG002_chrY_T0000301;Name=ENSG00000288686
HG002_chrY	CAT	exon	2429193	2429232	.	+	.	source_transcript=ENST00000683447.1;source_transcript_name=ENST00000683447;source_gene=ENSG00000288686.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000288686.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000683447.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000683447.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288686;transcript_id=HG002_chrY_T0000301;gene_id=HG002_chrY_G0000053;Parent=HG002_chrY_T0000301;transcript_name=HG002_chrY_T0000301;gene_name=ENSG00000288686;ID=exon:HG002_chrY_T0000301:0;Name=ENSG00000288686;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2429233	2447431	.	+	.	source_transcript=ENST00000683447.1;source_transcript_name=ENST00000683447;source_gene=ENSG00000288686.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000288686.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000683447.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000683447.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288686;transcript_id=HG002_chrY_T0000301;gene_id=HG002_chrY_G0000053;Parent=HG002_chrY_T0000301;transcript_name=HG002_chrY_T0000301;gene_name=ENSG00000288686;ID=intron:HG002_chrY_T0000301:0;Name=ENSG00000288686;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2447432	2447473	.	+	.	source_transcript=ENST00000683447.1;source_transcript_name=ENST00000683447;source_gene=ENSG00000288686.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000288686.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000683447.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000683447.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288686;transcript_id=HG002_chrY_T0000301;gene_id=HG002_chrY_G0000053;Parent=HG002_chrY_T0000301;transcript_name=HG002_chrY_T0000301;gene_name=ENSG00000288686;ID=exon:HG002_chrY_T0000301:1;Name=ENSG00000288686;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2447474	2451453	.	+	.	source_transcript=ENST00000683447.1;source_transcript_name=ENST00000683447;source_gene=ENSG00000288686.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000288686.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000683447.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000683447.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288686;transcript_id=HG002_chrY_T0000301;gene_id=HG002_chrY_G0000053;Parent=HG002_chrY_T0000301;transcript_name=HG002_chrY_T0000301;gene_name=ENSG00000288686;ID=intron:HG002_chrY_T0000301:1;Name=ENSG00000288686;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2451454	2451477	.	+	.	source_transcript=ENST00000683447.1;source_transcript_name=ENST00000683447;source_gene=ENSG00000288686.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000288686.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000683447.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000683447.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288686;transcript_id=HG002_chrY_T0000301;gene_id=HG002_chrY_G0000053;Parent=HG002_chrY_T0000301;transcript_name=HG002_chrY_T0000301;gene_name=ENSG00000288686;ID=exon:HG002_chrY_T0000301:2;Name=ENSG00000288686;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	2461484	2461588	.	+	.	source_gene_common_name=RNU6-1334P;source_gene=ENSG00000251841.1;alternative_source_transcripts=ENST00000516032.1,ENST00000516032.1;gene_id=HG002_chrY_G0000054;gene_biotype=snRNA;gene_name=RNU6-1334P;gene_sources=liftoff;ID=HG002_chrY_G0000054;Name=RNU6-1334P
HG002_chrY	CAT	transcript	2461484	2461588	1000	+	.	source_transcript=ENST00000516032.1;source_transcript_name=RNU6-1334P-201;source_gene=ENSG00000251841.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000251841.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516032.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-1334P;alternative_source_transcripts=ENST00000516032.1,ENST00000516032.1;transcript_id=HG002_chrY_T0000302;gene_id=HG002_chrY_G0000054;Parent=HG002_chrY_G0000054;transcript_name=HG002_chrY_T0000302;gene_name=RNU6-1334P;ID=HG002_chrY_T0000302;Name=RNU6-1334P
HG002_chrY	CAT	exon	2461484	2461588	.	+	.	source_transcript=ENST00000516032.1;source_transcript_name=RNU6-1334P-201;source_gene=ENSG00000251841.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000251841.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516032.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-1334P;alternative_source_transcripts=ENST00000516032.1,ENST00000516032.1;transcript_id=HG002_chrY_T0000302;gene_id=HG002_chrY_G0000054;Parent=HG002_chrY_T0000302;transcript_name=HG002_chrY_T0000302;gene_name=RNU6-1334P;ID=exon:HG002_chrY_T0000302:0;Name=RNU6-1334P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	2463590	2464417	.	-	.	source_gene_common_name=SRY;source_gene=ENSG00000184895.8;alternative_source_transcripts=ENST00000383070.2,ENST00000383070.2;gene_id=HG002_chrY_G0000055;gene_biotype=protein_coding;gene_name=SRY;gene_sources=liftoff;ID=HG002_chrY_G0000055;Name=SRY
HG002_chrY	CAT	transcript	2463590	2464417	100	-	.	source_transcript=ENST00000383070.2;source_transcript_name=SRY-201;source_gene=ENSG00000184895.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000184895.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383070.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000383070.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=ENST00000383070.2,ENST00000383070.2;transcript_id=HG002_chrY_T0000303;gene_id=HG002_chrY_G0000055;Parent=HG002_chrY_G0000055;transcript_name=HG002_chrY_T0000303;gene_name=SRY;ID=HG002_chrY_T0000303;Name=SRY
HG002_chrY	CAT	exon	2463590	2464417	.	-	.	source_transcript=ENST00000383070.2;source_transcript_name=SRY-201;source_gene=ENSG00000184895.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000184895.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383070.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000383070.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=ENST00000383070.2,ENST00000383070.2;transcript_id=HG002_chrY_T0000303;gene_id=HG002_chrY_G0000055;Parent=HG002_chrY_T0000303;transcript_name=HG002_chrY_T0000303;gene_name=SRY;ID=exon:HG002_chrY_T0000303:0;Name=SRY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2463724	2464338	.	-	0	source_transcript=ENST00000383070.2;source_transcript_name=SRY-201;source_gene=ENSG00000184895.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000184895.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383070.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000383070.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=ENST00000383070.2,ENST00000383070.2;transcript_id=HG002_chrY_T0000303;gene_id=HG002_chrY_G0000055;Parent=HG002_chrY_T0000303;transcript_name=HG002_chrY_T0000303;gene_name=SRY;ID=CDS:HG002_chrY_T0000303:0;Name=SRY;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	2463724	2463726	.	-	0	source_transcript=ENST00000383070.2;source_transcript_name=SRY-201;source_gene=ENSG00000184895.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000184895.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383070.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000383070.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=ENST00000383070.2,ENST00000383070.2;transcript_id=HG002_chrY_T0000303;gene_id=HG002_chrY_G0000055;Parent=HG002_chrY_T0000303;transcript_name=HG002_chrY_T0000303;gene_name=SRY;ID=stop_codon:HG002_chrY_T0000303;Name=SRY;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	2464336	2464338	.	-	0	source_transcript=ENST00000383070.2;source_transcript_name=SRY-201;source_gene=ENSG00000184895.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000184895.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383070.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000383070.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=ENST00000383070.2,ENST00000383070.2;transcript_id=HG002_chrY_T0000303;gene_id=HG002_chrY_G0000055;Parent=HG002_chrY_T0000303;transcript_name=HG002_chrY_T0000303;gene_name=SRY;ID=start_codon:HG002_chrY_T0000303;Name=SRY;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	2466562	2467063	.	+	.	source_gene_common_name=RNASEH2CP1;source_gene=ENSG00000237659.1;gene_id=HG002_chrY_G0000056;gene_biotype=transcribed_processed_pseudogene;gene_name=RNASEH2CP1;gene_sources=liftoff;ID=HG002_chrY_G0000056;Name=RNASEH2CP1
HG002_chrY	CAT	transcript	2466562	2467063	1000	+	.	source_transcript=ENST00000454281.1;source_transcript_name=RNASEH2CP1-201;source_gene=ENSG00000237659.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000237659.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000454281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454281.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNASEH2CP1;transcript_id=HG002_chrY_T0000305;gene_id=HG002_chrY_G0000056;Parent=HG002_chrY_G0000056;transcript_name=HG002_chrY_T0000305;gene_name=RNASEH2CP1;ID=HG002_chrY_T0000305;Name=RNASEH2CP1
HG002_chrY	CAT	exon	2466562	2467063	.	+	.	source_transcript=ENST00000454281.1;source_transcript_name=RNASEH2CP1-201;source_gene=ENSG00000237659.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000237659.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000454281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454281.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNASEH2CP1;transcript_id=HG002_chrY_T0000305;gene_id=HG002_chrY_G0000056;Parent=HG002_chrY_T0000305;transcript_name=HG002_chrY_T0000305;gene_name=RNASEH2CP1;ID=exon:HG002_chrY_T0000305:0;Name=RNASEH2CP1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	2491066	2502204	.	+	.	source_gene_common_name=ENSG00000300312;source_gene=ENSG00000300312.1;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;gene_id=HG002_chrY_G0000057;gene_biotype=lncRNA;gene_name=ENSG00000300312;gene_sources=liftoff;ID=HG002_chrY_G0000057;Name=ENSG00000300312
HG002_chrY	CAT	transcript	2491066	2502204	1000	+	.	source_transcript=ENST00000770736.1;source_transcript_name=ENST00000770736;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770736.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;transcript_id=HG002_chrY_T0000306;gene_id=HG002_chrY_G0000057;Parent=HG002_chrY_G0000057;transcript_name=HG002_chrY_T0000306;gene_name=ENSG00000300312;ID=HG002_chrY_T0000306;Name=ENSG00000300312
HG002_chrY	CAT	exon	2491066	2491101	.	+	.	source_transcript=ENST00000770736.1;source_transcript_name=ENST00000770736;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770736.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;transcript_id=HG002_chrY_T0000306;gene_id=HG002_chrY_G0000057;Parent=HG002_chrY_T0000306;transcript_name=HG002_chrY_T0000306;gene_name=ENSG00000300312;ID=exon:HG002_chrY_T0000306:0;Name=ENSG00000300312;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2491102	2501208	.	+	.	source_transcript=ENST00000770736.1;source_transcript_name=ENST00000770736;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770736.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;transcript_id=HG002_chrY_T0000306;gene_id=HG002_chrY_G0000057;Parent=HG002_chrY_T0000306;transcript_name=HG002_chrY_T0000306;gene_name=ENSG00000300312;ID=intron:HG002_chrY_T0000306:0;Name=ENSG00000300312;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2501209	2501431	.	+	.	source_transcript=ENST00000770736.1;source_transcript_name=ENST00000770736;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770736.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;transcript_id=HG002_chrY_T0000306;gene_id=HG002_chrY_G0000057;Parent=HG002_chrY_T0000306;transcript_name=HG002_chrY_T0000306;gene_name=ENSG00000300312;ID=exon:HG002_chrY_T0000306:1;Name=ENSG00000300312;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2501432	2501911	.	+	.	source_transcript=ENST00000770736.1;source_transcript_name=ENST00000770736;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770736.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;transcript_id=HG002_chrY_T0000306;gene_id=HG002_chrY_G0000057;Parent=HG002_chrY_T0000306;transcript_name=HG002_chrY_T0000306;gene_name=ENSG00000300312;ID=intron:HG002_chrY_T0000306:1;Name=ENSG00000300312;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2501912	2502204	.	+	.	source_transcript=ENST00000770736.1;source_transcript_name=ENST00000770736;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770736.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;transcript_id=HG002_chrY_T0000306;gene_id=HG002_chrY_G0000057;Parent=HG002_chrY_T0000306;transcript_name=HG002_chrY_T0000306;gene_name=ENSG00000300312;ID=exon:HG002_chrY_T0000306:2;Name=ENSG00000300312;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2491066	2500874	1000	+	.	source_transcript=ENST00000770737.1;source_transcript_name=ENST00000770737;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770737.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770737.1,ENST00000770737.1;transcript_id=HG002_chrY_T0000307;gene_id=HG002_chrY_G0000057;Parent=HG002_chrY_G0000057;transcript_name=HG002_chrY_T0000307;gene_name=ENSG00000300312;ID=HG002_chrY_T0000307;Name=ENSG00000300312
HG002_chrY	CAT	exon	2491066	2491101	.	+	.	source_transcript=ENST00000770737.1;source_transcript_name=ENST00000770737;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770737.1,ENST00000770737.1;transcript_id=HG002_chrY_T0000307;gene_id=HG002_chrY_G0000057;Parent=HG002_chrY_T0000307;transcript_name=HG002_chrY_T0000307;gene_name=ENSG00000300312;ID=exon:HG002_chrY_T0000307:0;Name=ENSG00000300312;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2491102	2500168	.	+	.	source_transcript=ENST00000770737.1;source_transcript_name=ENST00000770737;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770737.1,ENST00000770737.1;transcript_id=HG002_chrY_T0000307;gene_id=HG002_chrY_G0000057;Parent=HG002_chrY_T0000307;transcript_name=HG002_chrY_T0000307;gene_name=ENSG00000300312;ID=intron:HG002_chrY_T0000307:0;Name=ENSG00000300312;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2500169	2500874	.	+	.	source_transcript=ENST00000770737.1;source_transcript_name=ENST00000770737;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770737.1,ENST00000770737.1;transcript_id=HG002_chrY_T0000307;gene_id=HG002_chrY_G0000057;Parent=HG002_chrY_T0000307;transcript_name=HG002_chrY_T0000307;gene_name=ENSG00000300312;ID=exon:HG002_chrY_T0000307:1;Name=ENSG00000300312;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2501304	2502192	1000	+	.	source_transcript=ENST00000770738.1;source_transcript_name=ENST00000770738;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770738.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770738.1,ENST00000770738.1;transcript_id=HG002_chrY_T0000308;gene_id=HG002_chrY_G0000057;Parent=HG002_chrY_G0000057;transcript_name=HG002_chrY_T0000308;gene_name=ENSG00000300312;ID=HG002_chrY_T0000308;Name=ENSG00000300312
HG002_chrY	CAT	exon	2501304	2501431	.	+	.	source_transcript=ENST00000770738.1;source_transcript_name=ENST00000770738;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770738.1,ENST00000770738.1;transcript_id=HG002_chrY_T0000308;gene_id=HG002_chrY_G0000057;Parent=HG002_chrY_T0000308;transcript_name=HG002_chrY_T0000308;gene_name=ENSG00000300312;ID=exon:HG002_chrY_T0000308:0;Name=ENSG00000300312;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2501432	2501911	.	+	.	source_transcript=ENST00000770738.1;source_transcript_name=ENST00000770738;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770738.1,ENST00000770738.1;transcript_id=HG002_chrY_T0000308;gene_id=HG002_chrY_G0000057;Parent=HG002_chrY_T0000308;transcript_name=HG002_chrY_T0000308;gene_name=ENSG00000300312;ID=intron:HG002_chrY_T0000308:0;Name=ENSG00000300312;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2501912	2502192	.	+	.	source_transcript=ENST00000770738.1;source_transcript_name=ENST00000770738;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770738.1,ENST00000770738.1;transcript_id=HG002_chrY_T0000308;gene_id=HG002_chrY_G0000057;Parent=HG002_chrY_T0000308;transcript_name=HG002_chrY_T0000308;gene_name=ENSG00000300312;ID=exon:HG002_chrY_T0000308:1;Name=ENSG00000300312;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	2504708	2504944	.	+	.	source_gene_common_name=TOMM22P2;source_gene=ENSG00000232195.1;alternative_source_transcripts=ENST00000430735.1,ENST00000430735.1;gene_id=HG002_chrY_G0000058;gene_biotype=processed_pseudogene;gene_name=TOMM22P2;gene_sources=liftoff;ID=HG002_chrY_G0000058;Name=TOMM22P2
HG002_chrY	CAT	transcript	2504708	2504944	1000	+	.	source_transcript=ENST00000430735.1;source_transcript_name=TOMM22P2-201;source_gene=ENSG00000232195.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232195.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430735.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TOMM22P2;alternative_source_transcripts=ENST00000430735.1,ENST00000430735.1;transcript_id=HG002_chrY_T0000309;gene_id=HG002_chrY_G0000058;Parent=HG002_chrY_G0000058;transcript_name=HG002_chrY_T0000309;gene_name=TOMM22P2;ID=HG002_chrY_T0000309;Name=TOMM22P2
HG002_chrY	CAT	exon	2504708	2504944	.	+	.	source_transcript=ENST00000430735.1;source_transcript_name=TOMM22P2-201;source_gene=ENSG00000232195.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232195.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430735.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TOMM22P2;alternative_source_transcripts=ENST00000430735.1,ENST00000430735.1;transcript_id=HG002_chrY_T0000309;gene_id=HG002_chrY_G0000058;Parent=HG002_chrY_T0000309;transcript_name=HG002_chrY_T0000309;gene_name=TOMM22P2;ID=exon:HG002_chrY_T0000309:0;Name=TOMM22P2;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	2504918	2517577	.	-	.	source_gene_common_name=ENSG00000286130;source_gene=ENSG00000286130.1;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;gene_id=HG002_chrY_G0000059;gene_biotype=lncRNA;gene_name=ENSG00000286130;gene_sources=liftoff;ID=HG002_chrY_G0000059;Name=ENSG00000286130
HG002_chrY	CAT	transcript	2504918	2517577	1000	-	.	source_transcript=ENST00000651710.1;source_transcript_name=ENST00000651710;source_gene=ENSG00000286130.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286130.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651710.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286130;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;transcript_id=HG002_chrY_T0000310;gene_id=HG002_chrY_G0000059;Parent=HG002_chrY_G0000059;transcript_name=HG002_chrY_T0000310;gene_name=ENSG00000286130;ID=HG002_chrY_T0000310;Name=ENSG00000286130
HG002_chrY	CAT	exon	2504918	2505461	.	-	.	source_transcript=ENST00000651710.1;source_transcript_name=ENST00000651710;source_gene=ENSG00000286130.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286130.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286130;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;transcript_id=HG002_chrY_T0000310;gene_id=HG002_chrY_G0000059;Parent=HG002_chrY_T0000310;transcript_name=HG002_chrY_T0000310;gene_name=ENSG00000286130;ID=exon:HG002_chrY_T0000310:0;Name=ENSG00000286130;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2505462	2506251	.	-	.	source_transcript=ENST00000651710.1;source_transcript_name=ENST00000651710;source_gene=ENSG00000286130.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286130.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286130;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;transcript_id=HG002_chrY_T0000310;gene_id=HG002_chrY_G0000059;Parent=HG002_chrY_T0000310;transcript_name=HG002_chrY_T0000310;gene_name=ENSG00000286130;ID=intron:HG002_chrY_T0000310:0;Name=ENSG00000286130;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2506252	2506477	.	-	.	source_transcript=ENST00000651710.1;source_transcript_name=ENST00000651710;source_gene=ENSG00000286130.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286130.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286130;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;transcript_id=HG002_chrY_T0000310;gene_id=HG002_chrY_G0000059;Parent=HG002_chrY_T0000310;transcript_name=HG002_chrY_T0000310;gene_name=ENSG00000286130;ID=exon:HG002_chrY_T0000310:1;Name=ENSG00000286130;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2506478	2517196	.	-	.	source_transcript=ENST00000651710.1;source_transcript_name=ENST00000651710;source_gene=ENSG00000286130.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286130.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286130;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;transcript_id=HG002_chrY_T0000310;gene_id=HG002_chrY_G0000059;Parent=HG002_chrY_T0000310;transcript_name=HG002_chrY_T0000310;gene_name=ENSG00000286130;ID=intron:HG002_chrY_T0000310:1;Name=ENSG00000286130;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2517197	2517577	.	-	.	source_transcript=ENST00000651710.1;source_transcript_name=ENST00000651710;source_gene=ENSG00000286130.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286130.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286130;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;transcript_id=HG002_chrY_T0000310;gene_id=HG002_chrY_G0000059;Parent=HG002_chrY_T0000310;transcript_name=HG002_chrY_T0000310;gene_name=ENSG00000286130;ID=exon:HG002_chrY_T0000310:2;Name=ENSG00000286130;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	2518328	2609077	.	+	.	source_gene_common_name=RPS4Y1;source_gene=ENSG00000129824.16;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;gene_id=HG002_chrY_G0000060;gene_biotype=protein_coding;gene_name=RPS4Y1;gene_sources=liftoff;ID=HG002_chrY_G0000060;Name=RPS4Y1
HG002_chrY	CAT	transcript	2518328	2543995	100	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG002_chrY_T0000311;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_G0000060;transcript_name=HG002_chrY_T0000311;gene_name=RPS4Y1;ID=HG002_chrY_T0000311;Name=RPS4Y1
HG002_chrY	CAT	exon	2518328	2518353	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG002_chrY_T0000311;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000311;transcript_name=HG002_chrY_T0000311;gene_name=RPS4Y1;ID=exon:HG002_chrY_T0000311:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2518351	2518353	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG002_chrY_T0000311;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000311;transcript_name=HG002_chrY_T0000311;gene_name=RPS4Y1;ID=CDS:HG002_chrY_T0000311:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	2518351	2518353	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG002_chrY_T0000311;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000311;transcript_name=HG002_chrY_T0000311;gene_name=RPS4Y1;ID=start_codon:HG002_chrY_T0000311;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2518354	2518890	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG002_chrY_T0000311;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000311;transcript_name=HG002_chrY_T0000311;gene_name=RPS4Y1;ID=intron:HG002_chrY_T0000311:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2518891	2518968	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG002_chrY_T0000311;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000311;transcript_name=HG002_chrY_T0000311;gene_name=RPS4Y1;ID=exon:HG002_chrY_T0000311:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2518891	2518968	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG002_chrY_T0000311;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000311;transcript_name=HG002_chrY_T0000311;gene_name=RPS4Y1;ID=CDS:HG002_chrY_T0000311:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2518969	2520802	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG002_chrY_T0000311;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000311;transcript_name=HG002_chrY_T0000311;gene_name=RPS4Y1;ID=intron:HG002_chrY_T0000311:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2520803	2520983	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG002_chrY_T0000311;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000311;transcript_name=HG002_chrY_T0000311;gene_name=RPS4Y1;ID=exon:HG002_chrY_T0000311:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2520803	2520983	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG002_chrY_T0000311;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000311;transcript_name=HG002_chrY_T0000311;gene_name=RPS4Y1;ID=CDS:HG002_chrY_T0000311:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2520984	2522371	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG002_chrY_T0000311;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000311;transcript_name=HG002_chrY_T0000311;gene_name=RPS4Y1;ID=intron:HG002_chrY_T0000311:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2522372	2522469	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG002_chrY_T0000311;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000311;transcript_name=HG002_chrY_T0000311;gene_name=RPS4Y1;ID=exon:HG002_chrY_T0000311:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2522372	2522469	.	+	2	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG002_chrY_T0000311;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000311;transcript_name=HG002_chrY_T0000311;gene_name=RPS4Y1;ID=CDS:HG002_chrY_T0000311:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2522470	2531326	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG002_chrY_T0000311;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000311;transcript_name=HG002_chrY_T0000311;gene_name=RPS4Y1;ID=intron:HG002_chrY_T0000311:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2531327	2531498	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG002_chrY_T0000311;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000311;transcript_name=HG002_chrY_T0000311;gene_name=RPS4Y1;ID=exon:HG002_chrY_T0000311:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2531327	2531498	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG002_chrY_T0000311;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000311;transcript_name=HG002_chrY_T0000311;gene_name=RPS4Y1;ID=CDS:HG002_chrY_T0000311:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2531499	2541814	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG002_chrY_T0000311;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000311;transcript_name=HG002_chrY_T0000311;gene_name=RPS4Y1;ID=intron:HG002_chrY_T0000311:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2541815	2541972	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG002_chrY_T0000311;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000311;transcript_name=HG002_chrY_T0000311;gene_name=RPS4Y1;ID=exon:HG002_chrY_T0000311:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2541815	2541972	.	+	2	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG002_chrY_T0000311;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000311;transcript_name=HG002_chrY_T0000311;gene_name=RPS4Y1;ID=CDS:HG002_chrY_T0000311:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2541973	2543519	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG002_chrY_T0000311;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000311;transcript_name=HG002_chrY_T0000311;gene_name=RPS4Y1;ID=intron:HG002_chrY_T0000311:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2543520	2543995	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG002_chrY_T0000311;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000311;transcript_name=HG002_chrY_T0000311;gene_name=RPS4Y1;ID=exon:HG002_chrY_T0000311:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2543520	2543621	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG002_chrY_T0000311;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000311;transcript_name=HG002_chrY_T0000311;gene_name=RPS4Y1;ID=CDS:HG002_chrY_T0000311:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	2543619	2543621	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG002_chrY_T0000311;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000311;transcript_name=HG002_chrY_T0000311;gene_name=RPS4Y1;ID=stop_codon:HG002_chrY_T0000311;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2518646	2543589	100	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG002_chrY_T0000312;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_G0000060;transcript_name=HG002_chrY_T0000312;gene_name=RPS4Y1;ID=HG002_chrY_T0000312;Name=RPS4Y1
HG002_chrY	CAT	exon	2518646	2518699	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG002_chrY_T0000312;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000312;transcript_name=HG002_chrY_T0000312;gene_name=RPS4Y1;ID=exon:HG002_chrY_T0000312:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2518670	2518699	.	+	0	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG002_chrY_T0000312;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000312;transcript_name=HG002_chrY_T0000312;gene_name=RPS4Y1;ID=CDS:HG002_chrY_T0000312:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	2518670	2518672	.	+	0	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG002_chrY_T0000312;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000312;transcript_name=HG002_chrY_T0000312;gene_name=RPS4Y1;ID=start_codon:HG002_chrY_T0000312;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2518700	2518890	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG002_chrY_T0000312;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000312;transcript_name=HG002_chrY_T0000312;gene_name=RPS4Y1;ID=intron:HG002_chrY_T0000312:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2518891	2518968	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG002_chrY_T0000312;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000312;transcript_name=HG002_chrY_T0000312;gene_name=RPS4Y1;ID=exon:HG002_chrY_T0000312:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2518891	2518968	.	+	0	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG002_chrY_T0000312;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000312;transcript_name=HG002_chrY_T0000312;gene_name=RPS4Y1;ID=CDS:HG002_chrY_T0000312:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2518969	2520802	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG002_chrY_T0000312;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000312;transcript_name=HG002_chrY_T0000312;gene_name=RPS4Y1;ID=intron:HG002_chrY_T0000312:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2520803	2520983	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG002_chrY_T0000312;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000312;transcript_name=HG002_chrY_T0000312;gene_name=RPS4Y1;ID=exon:HG002_chrY_T0000312:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2520803	2520983	.	+	0	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG002_chrY_T0000312;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000312;transcript_name=HG002_chrY_T0000312;gene_name=RPS4Y1;ID=CDS:HG002_chrY_T0000312:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2520984	2522371	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG002_chrY_T0000312;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000312;transcript_name=HG002_chrY_T0000312;gene_name=RPS4Y1;ID=intron:HG002_chrY_T0000312:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2522372	2522469	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG002_chrY_T0000312;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000312;transcript_name=HG002_chrY_T0000312;gene_name=RPS4Y1;ID=exon:HG002_chrY_T0000312:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2522372	2522469	.	+	2	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG002_chrY_T0000312;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000312;transcript_name=HG002_chrY_T0000312;gene_name=RPS4Y1;ID=CDS:HG002_chrY_T0000312:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2522470	2531326	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG002_chrY_T0000312;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000312;transcript_name=HG002_chrY_T0000312;gene_name=RPS4Y1;ID=intron:HG002_chrY_T0000312:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2531327	2531498	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG002_chrY_T0000312;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000312;transcript_name=HG002_chrY_T0000312;gene_name=RPS4Y1;ID=exon:HG002_chrY_T0000312:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2531327	2531498	.	+	0	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG002_chrY_T0000312;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000312;transcript_name=HG002_chrY_T0000312;gene_name=RPS4Y1;ID=CDS:HG002_chrY_T0000312:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2531499	2541814	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG002_chrY_T0000312;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000312;transcript_name=HG002_chrY_T0000312;gene_name=RPS4Y1;ID=intron:HG002_chrY_T0000312:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2541815	2541972	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG002_chrY_T0000312;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000312;transcript_name=HG002_chrY_T0000312;gene_name=RPS4Y1;ID=exon:HG002_chrY_T0000312:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2541815	2541972	.	+	2	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG002_chrY_T0000312;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000312;transcript_name=HG002_chrY_T0000312;gene_name=RPS4Y1;ID=CDS:HG002_chrY_T0000312:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2541973	2543519	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG002_chrY_T0000312;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000312;transcript_name=HG002_chrY_T0000312;gene_name=RPS4Y1;ID=intron:HG002_chrY_T0000312:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2543520	2543589	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG002_chrY_T0000312;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000312;transcript_name=HG002_chrY_T0000312;gene_name=RPS4Y1;ID=exon:HG002_chrY_T0000312:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2543520	2543589	.	+	0	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG002_chrY_T0000312;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000312;transcript_name=HG002_chrY_T0000312;gene_name=RPS4Y1;ID=CDS:HG002_chrY_T0000312:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2530823	2543683	1000	+	.	source_transcript=ENST00000477725.1;source_transcript_name=RPS4Y1-203;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477725.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000477725.1,ENST00000477725.1;transcript_id=HG002_chrY_T0000313;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_G0000060;transcript_name=HG002_chrY_T0000313;gene_name=RPS4Y1;ID=HG002_chrY_T0000313;Name=RPS4Y1
HG002_chrY	CAT	exon	2530823	2531498	.	+	.	source_transcript=ENST00000477725.1;source_transcript_name=RPS4Y1-203;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000477725.1,ENST00000477725.1;transcript_id=HG002_chrY_T0000313;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000313;transcript_name=HG002_chrY_T0000313;gene_name=RPS4Y1;ID=exon:HG002_chrY_T0000313:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2531499	2541814	.	+	.	source_transcript=ENST00000477725.1;source_transcript_name=RPS4Y1-203;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000477725.1,ENST00000477725.1;transcript_id=HG002_chrY_T0000313;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000313;transcript_name=HG002_chrY_T0000313;gene_name=RPS4Y1;ID=intron:HG002_chrY_T0000313:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2541815	2541972	.	+	.	source_transcript=ENST00000477725.1;source_transcript_name=RPS4Y1-203;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000477725.1,ENST00000477725.1;transcript_id=HG002_chrY_T0000313;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000313;transcript_name=HG002_chrY_T0000313;gene_name=RPS4Y1;ID=exon:HG002_chrY_T0000313:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2541973	2543519	.	+	.	source_transcript=ENST00000477725.1;source_transcript_name=RPS4Y1-203;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000477725.1,ENST00000477725.1;transcript_id=HG002_chrY_T0000313;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000313;transcript_name=HG002_chrY_T0000313;gene_name=RPS4Y1;ID=intron:HG002_chrY_T0000313:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2543520	2543683	.	+	.	source_transcript=ENST00000477725.1;source_transcript_name=RPS4Y1-203;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000477725.1,ENST00000477725.1;transcript_id=HG002_chrY_T0000313;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000313;transcript_name=HG002_chrY_T0000313;gene_name=RPS4Y1;ID=exon:HG002_chrY_T0000313:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2531457	2609077	1000	+	.	source_transcript=ENST00000515575.1;source_transcript_name=RPS4Y1-204;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000515575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515575.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000515575.1,ENST00000515575.1;transcript_id=HG002_chrY_T0000314;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_G0000060;transcript_name=HG002_chrY_T0000314;gene_name=RPS4Y1;ID=HG002_chrY_T0000314;Name=RPS4Y1
HG002_chrY	CAT	exon	2531457	2531498	.	+	.	source_transcript=ENST00000515575.1;source_transcript_name=RPS4Y1-204;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000515575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515575.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000515575.1,ENST00000515575.1;transcript_id=HG002_chrY_T0000314;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000314;transcript_name=HG002_chrY_T0000314;gene_name=RPS4Y1;ID=exon:HG002_chrY_T0000314:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2531499	2605941	.	+	.	source_transcript=ENST00000515575.1;source_transcript_name=RPS4Y1-204;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000515575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515575.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000515575.1,ENST00000515575.1;transcript_id=HG002_chrY_T0000314;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000314;transcript_name=HG002_chrY_T0000314;gene_name=RPS4Y1;ID=intron:HG002_chrY_T0000314:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2605942	2606063	.	+	.	source_transcript=ENST00000515575.1;source_transcript_name=RPS4Y1-204;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000515575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515575.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000515575.1,ENST00000515575.1;transcript_id=HG002_chrY_T0000314;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000314;transcript_name=HG002_chrY_T0000314;gene_name=RPS4Y1;ID=exon:HG002_chrY_T0000314:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2606064	2608787	.	+	.	source_transcript=ENST00000515575.1;source_transcript_name=RPS4Y1-204;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000515575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515575.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000515575.1,ENST00000515575.1;transcript_id=HG002_chrY_T0000314;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000314;transcript_name=HG002_chrY_T0000314;gene_name=RPS4Y1;ID=intron:HG002_chrY_T0000314:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2608788	2609077	.	+	.	source_transcript=ENST00000515575.1;source_transcript_name=RPS4Y1-204;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000515575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515575.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000515575.1,ENST00000515575.1;transcript_id=HG002_chrY_T0000314;gene_id=HG002_chrY_G0000060;Parent=HG002_chrY_T0000314;transcript_name=HG002_chrY_T0000314;gene_name=RPS4Y1;ID=exon:HG002_chrY_T0000314:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	2558411	2560380	.	-	.	source_gene_common_name=HSFY3P;source_gene=ENSG00000227289.3;gene_id=HG002_chrY_G0000061;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=HSFY3P;gene_sources=liftoff;ID=HG002_chrY_G0000061;Name=HSFY3P
HG002_chrY	CAT	transcript	2558411	2560380	1000	-	.	source_transcript=ENST00000444242.1;source_transcript_name=HSFY3P-201;source_gene=ENSG00000227289.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227289.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444242.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY3P;transcript_id=HG002_chrY_T0000315;gene_id=HG002_chrY_G0000061;Parent=HG002_chrY_G0000061;transcript_name=HG002_chrY_T0000315;gene_name=HSFY3P;ID=HG002_chrY_T0000315;Name=HSFY3P
HG002_chrY	CAT	exon	2558411	2559089	.	-	.	source_transcript=ENST00000444242.1;source_transcript_name=HSFY3P-201;source_gene=ENSG00000227289.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227289.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY3P;transcript_id=HG002_chrY_T0000315;gene_id=HG002_chrY_G0000061;Parent=HG002_chrY_T0000315;transcript_name=HG002_chrY_T0000315;gene_name=HSFY3P;ID=exon:HG002_chrY_T0000315:0;Name=HSFY3P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2559090	2559868	.	-	.	source_transcript=ENST00000444242.1;source_transcript_name=HSFY3P-201;source_gene=ENSG00000227289.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227289.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY3P;transcript_id=HG002_chrY_T0000315;gene_id=HG002_chrY_G0000061;Parent=HG002_chrY_T0000315;transcript_name=HG002_chrY_T0000315;gene_name=HSFY3P;ID=intron:HG002_chrY_T0000315:0;Name=HSFY3P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2559869	2560380	.	-	.	source_transcript=ENST00000444242.1;source_transcript_name=HSFY3P-201;source_gene=ENSG00000227289.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227289.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY3P;transcript_id=HG002_chrY_T0000315;gene_id=HG002_chrY_G0000061;Parent=HG002_chrY_T0000315;transcript_name=HG002_chrY_T0000315;gene_name=HSFY3P;ID=exon:HG002_chrY_T0000315:1;Name=HSFY3P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	2559838	2567279	.	-	.	source_gene_common_name=ENSG00000290841;source_gene=ENSG00000290841.1;gene_id=HG002_chrY_G0000062;gene_biotype=lncRNA;gene_name=ENSG00000290841;gene_sources=liftoff;ID=HG002_chrY_G0000062;Name=ENSG00000290841
HG002_chrY	CAT	transcript	2559838	2567279	1000	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=HG002_chrY_T0000316;gene_id=HG002_chrY_G0000062;Parent=HG002_chrY_G0000062;transcript_name=HG002_chrY_T0000316;gene_name=ENSG00000290841;ID=HG002_chrY_T0000316;Name=ENSG00000290841
HG002_chrY	CAT	exon	2559838	2560135	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=HG002_chrY_T0000316;gene_id=HG002_chrY_G0000062;Parent=HG002_chrY_T0000316;transcript_name=HG002_chrY_T0000316;gene_name=ENSG00000290841;ID=exon:HG002_chrY_T0000316:0;Name=ENSG00000290841;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2560136	2563870	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=HG002_chrY_T0000316;gene_id=HG002_chrY_G0000062;Parent=HG002_chrY_T0000316;transcript_name=HG002_chrY_T0000316;gene_name=ENSG00000290841;ID=intron:HG002_chrY_T0000316:0;Name=ENSG00000290841;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2563871	2563971	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=HG002_chrY_T0000316;gene_id=HG002_chrY_G0000062;Parent=HG002_chrY_T0000316;transcript_name=HG002_chrY_T0000316;gene_name=ENSG00000290841;ID=exon:HG002_chrY_T0000316:1;Name=ENSG00000290841;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2563972	2565172	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=HG002_chrY_T0000316;gene_id=HG002_chrY_G0000062;Parent=HG002_chrY_T0000316;transcript_name=HG002_chrY_T0000316;gene_name=ENSG00000290841;ID=intron:HG002_chrY_T0000316:1;Name=ENSG00000290841;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2565173	2565290	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=HG002_chrY_T0000316;gene_id=HG002_chrY_G0000062;Parent=HG002_chrY_T0000316;transcript_name=HG002_chrY_T0000316;gene_name=ENSG00000290841;ID=exon:HG002_chrY_T0000316:2;Name=ENSG00000290841;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2565291	2567149	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=HG002_chrY_T0000316;gene_id=HG002_chrY_G0000062;Parent=HG002_chrY_T0000316;transcript_name=HG002_chrY_T0000316;gene_name=ENSG00000290841;ID=intron:HG002_chrY_T0000316:2;Name=ENSG00000290841;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2567150	2567279	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=HG002_chrY_T0000316;gene_id=HG002_chrY_G0000062;Parent=HG002_chrY_T0000316;transcript_name=HG002_chrY_T0000316;gene_name=ENSG00000290841;ID=exon:HG002_chrY_T0000316:3;Name=ENSG00000290841;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	2606079	2608197	.	-	.	source_gene_common_name=NAP1L1P2;source_gene=ENSG00000229163.2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;gene_id=HG002_chrY_G0000063;gene_biotype=processed_pseudogene;gene_name=NAP1L1P2;gene_sources=liftoff;ID=HG002_chrY_G0000063;Name=NAP1L1P2
HG002_chrY	CAT	transcript	2606079	2608197	1000	-	.	source_transcript=ENST00000414182.2;source_transcript_name=NAP1L1P2-201;source_gene=ENSG00000229163.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229163.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414182.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000414182.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NAP1L1P2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;transcript_id=HG002_chrY_T0000317;gene_id=HG002_chrY_G0000063;Parent=HG002_chrY_G0000063;transcript_name=HG002_chrY_T0000317;gene_name=NAP1L1P2;ID=HG002_chrY_T0000317;Name=NAP1L1P2
HG002_chrY	CAT	exon	2606079	2606120	.	-	.	source_transcript=ENST00000414182.2;source_transcript_name=NAP1L1P2-201;source_gene=ENSG00000229163.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229163.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414182.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000414182.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NAP1L1P2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;transcript_id=HG002_chrY_T0000317;gene_id=HG002_chrY_G0000063;Parent=HG002_chrY_T0000317;transcript_name=HG002_chrY_T0000317;gene_name=NAP1L1P2;ID=exon:HG002_chrY_T0000317:0;Name=NAP1L1P2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2606121	2606447	.	-	.	source_transcript=ENST00000414182.2;source_transcript_name=NAP1L1P2-201;source_gene=ENSG00000229163.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229163.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414182.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000414182.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NAP1L1P2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;transcript_id=HG002_chrY_T0000317;gene_id=HG002_chrY_G0000063;Parent=HG002_chrY_T0000317;transcript_name=HG002_chrY_T0000317;gene_name=NAP1L1P2;ID=intron:HG002_chrY_T0000317:0;Name=NAP1L1P2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2606448	2607444	.	-	.	source_transcript=ENST00000414182.2;source_transcript_name=NAP1L1P2-201;source_gene=ENSG00000229163.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229163.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414182.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000414182.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NAP1L1P2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;transcript_id=HG002_chrY_T0000317;gene_id=HG002_chrY_G0000063;Parent=HG002_chrY_T0000317;transcript_name=HG002_chrY_T0000317;gene_name=NAP1L1P2;ID=exon:HG002_chrY_T0000317:1;Name=NAP1L1P2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2607445	2608147	.	-	.	source_transcript=ENST00000414182.2;source_transcript_name=NAP1L1P2-201;source_gene=ENSG00000229163.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229163.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414182.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000414182.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NAP1L1P2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;transcript_id=HG002_chrY_T0000317;gene_id=HG002_chrY_G0000063;Parent=HG002_chrY_T0000317;transcript_name=HG002_chrY_T0000317;gene_name=NAP1L1P2;ID=intron:HG002_chrY_T0000317:1;Name=NAP1L1P2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2608148	2608197	.	-	.	source_transcript=ENST00000414182.2;source_transcript_name=NAP1L1P2-201;source_gene=ENSG00000229163.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229163.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414182.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000414182.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NAP1L1P2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;transcript_id=HG002_chrY_T0000317;gene_id=HG002_chrY_G0000063;Parent=HG002_chrY_T0000317;transcript_name=HG002_chrY_T0000317;gene_name=NAP1L1P2;ID=exon:HG002_chrY_T0000317:2;Name=NAP1L1P2;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	2611483	2611848	.	-	.	source_gene_common_name=ENSG00000278847;source_gene=ENSG00000278847.1;alternative_source_transcripts=ENST00000611750.1,ENST00000611750.1;gene_id=HG002_chrY_G0000064;gene_biotype=lncRNA;gene_name=ENSG00000278847;gene_sources=liftoff;ID=HG002_chrY_G0000064;Name=ENSG00000278847
HG002_chrY	CAT	transcript	2611483	2611848	1000	-	.	source_transcript=ENST00000611750.1;source_transcript_name=ENST00000611750;source_gene=ENSG00000278847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000278847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000611750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000611750.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278847;alternative_source_transcripts=ENST00000611750.1,ENST00000611750.1;transcript_id=HG002_chrY_T0000318;gene_id=HG002_chrY_G0000064;Parent=HG002_chrY_G0000064;transcript_name=HG002_chrY_T0000318;gene_name=ENSG00000278847;ID=HG002_chrY_T0000318;Name=ENSG00000278847
HG002_chrY	CAT	exon	2611483	2611848	.	-	.	source_transcript=ENST00000611750.1;source_transcript_name=ENST00000611750;source_gene=ENSG00000278847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000278847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000611750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000611750.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278847;alternative_source_transcripts=ENST00000611750.1,ENST00000611750.1;transcript_id=HG002_chrY_T0000318;gene_id=HG002_chrY_G0000064;Parent=HG002_chrY_T0000318;transcript_name=HG002_chrY_T0000318;gene_name=ENSG00000278847;ID=exon:HG002_chrY_T0000318:0;Name=ENSG00000278847;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	2612358	2659561	.	+	.	source_gene_common_name=ZFY;source_gene=ENSG00000067646.12;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;gene_id=HG002_chrY_G0000065;gene_biotype=protein_coding;gene_name=ZFY;gene_sources=liftoff;ID=HG002_chrY_G0000065;Name=ZFY
HG002_chrY	CAT	transcript	2612358	2659561	100	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG002_chrY_T0000319;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_G0000065;transcript_name=HG002_chrY_T0000319;gene_name=ZFY;ID=HG002_chrY_T0000319;Name=ZFY
HG002_chrY	CAT	exon	2612358	2612523	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG002_chrY_T0000319;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000319;transcript_name=HG002_chrY_T0000319;gene_name=ZFY;ID=exon:HG002_chrY_T0000319:0;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2612524	2630965	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG002_chrY_T0000319;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000319;transcript_name=HG002_chrY_T0000319;gene_name=ZFY;ID=intron:HG002_chrY_T0000319:0;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2630966	2631054	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG002_chrY_T0000319;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000319;transcript_name=HG002_chrY_T0000319;gene_name=ZFY;ID=exon:HG002_chrY_T0000319:1;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2630994	2631054	.	+	0	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG002_chrY_T0000319;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000319;transcript_name=HG002_chrY_T0000319;gene_name=ZFY;ID=CDS:HG002_chrY_T0000319:0;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	2630994	2630996	.	+	0	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG002_chrY_T0000319;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000319;transcript_name=HG002_chrY_T0000319;gene_name=ZFY;ID=start_codon:HG002_chrY_T0000319;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2631055	2638129	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG002_chrY_T0000319;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000319;transcript_name=HG002_chrY_T0000319;gene_name=ZFY;ID=intron:HG002_chrY_T0000319:1;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2638130	2638702	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG002_chrY_T0000319;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000319;transcript_name=HG002_chrY_T0000319;gene_name=ZFY;ID=exon:HG002_chrY_T0000319:2;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2638130	2638702	.	+	2	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG002_chrY_T0000319;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000319;transcript_name=HG002_chrY_T0000319;gene_name=ZFY;ID=CDS:HG002_chrY_T0000319:1;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2638703	2652150	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG002_chrY_T0000319;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000319;transcript_name=HG002_chrY_T0000319;gene_name=ZFY;ID=intron:HG002_chrY_T0000319:2;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2652151	2652300	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG002_chrY_T0000319;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000319;transcript_name=HG002_chrY_T0000319;gene_name=ZFY;ID=exon:HG002_chrY_T0000319:3;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2652151	2652300	.	+	2	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG002_chrY_T0000319;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000319;transcript_name=HG002_chrY_T0000319;gene_name=ZFY;ID=CDS:HG002_chrY_T0000319:2;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2652301	2652566	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG002_chrY_T0000319;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000319;transcript_name=HG002_chrY_T0000319;gene_name=ZFY;ID=intron:HG002_chrY_T0000319:3;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2652567	2652710	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG002_chrY_T0000319;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000319;transcript_name=HG002_chrY_T0000319;gene_name=ZFY;ID=exon:HG002_chrY_T0000319:4;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2652567	2652710	.	+	2	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG002_chrY_T0000319;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000319;transcript_name=HG002_chrY_T0000319;gene_name=ZFY;ID=CDS:HG002_chrY_T0000319:3;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2652711	2653725	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG002_chrY_T0000319;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000319;transcript_name=HG002_chrY_T0000319;gene_name=ZFY;ID=intron:HG002_chrY_T0000319:4;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2653726	2653878	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG002_chrY_T0000319;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000319;transcript_name=HG002_chrY_T0000319;gene_name=ZFY;ID=exon:HG002_chrY_T0000319:5;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2653726	2653878	.	+	2	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG002_chrY_T0000319;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000319;transcript_name=HG002_chrY_T0000319;gene_name=ZFY;ID=CDS:HG002_chrY_T0000319:4;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2653879	2654994	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG002_chrY_T0000319;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000319;transcript_name=HG002_chrY_T0000319;gene_name=ZFY;ID=intron:HG002_chrY_T0000319:5;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2654995	2655135	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG002_chrY_T0000319;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000319;transcript_name=HG002_chrY_T0000319;gene_name=ZFY;ID=exon:HG002_chrY_T0000319:6;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2654995	2655135	.	+	2	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG002_chrY_T0000319;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000319;transcript_name=HG002_chrY_T0000319;gene_name=ZFY;ID=CDS:HG002_chrY_T0000319:5;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2655136	2655864	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG002_chrY_T0000319;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000319;transcript_name=HG002_chrY_T0000319;gene_name=ZFY;ID=intron:HG002_chrY_T0000319:6;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2655865	2659561	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG002_chrY_T0000319;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000319;transcript_name=HG002_chrY_T0000319;gene_name=ZFY;ID=exon:HG002_chrY_T0000319:7;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2655865	2657048	.	+	2	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG002_chrY_T0000319;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000319;transcript_name=HG002_chrY_T0000319;gene_name=ZFY;ID=CDS:HG002_chrY_T0000319:6;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	2657046	2657048	.	+	0	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG002_chrY_T0000319;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000319;transcript_name=HG002_chrY_T0000319;gene_name=ZFY;ID=stop_codon:HG002_chrY_T0000319;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2612458	2659561	100	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG002_chrY_T0000320;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_G0000065;transcript_name=HG002_chrY_T0000320;gene_name=ZFY;ID=HG002_chrY_T0000320;Name=ZFY
HG002_chrY	CAT	exon	2612458	2612846	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG002_chrY_T0000320;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000320;transcript_name=HG002_chrY_T0000320;gene_name=ZFY;ID=exon:HG002_chrY_T0000320:0;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2612847	2630965	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG002_chrY_T0000320;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000320;transcript_name=HG002_chrY_T0000320;gene_name=ZFY;ID=intron:HG002_chrY_T0000320:0;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2630966	2631054	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG002_chrY_T0000320;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000320;transcript_name=HG002_chrY_T0000320;gene_name=ZFY;ID=exon:HG002_chrY_T0000320:1;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2630994	2631054	.	+	0	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG002_chrY_T0000320;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000320;transcript_name=HG002_chrY_T0000320;gene_name=ZFY;ID=CDS:HG002_chrY_T0000320:0;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	2630994	2630996	.	+	0	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG002_chrY_T0000320;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000320;transcript_name=HG002_chrY_T0000320;gene_name=ZFY;ID=start_codon:HG002_chrY_T0000320;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2631055	2638129	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG002_chrY_T0000320;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000320;transcript_name=HG002_chrY_T0000320;gene_name=ZFY;ID=intron:HG002_chrY_T0000320:1;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2638130	2638702	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG002_chrY_T0000320;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000320;transcript_name=HG002_chrY_T0000320;gene_name=ZFY;ID=exon:HG002_chrY_T0000320:2;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2638130	2638702	.	+	2	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG002_chrY_T0000320;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000320;transcript_name=HG002_chrY_T0000320;gene_name=ZFY;ID=CDS:HG002_chrY_T0000320:1;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2638703	2652150	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG002_chrY_T0000320;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000320;transcript_name=HG002_chrY_T0000320;gene_name=ZFY;ID=intron:HG002_chrY_T0000320:2;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2652151	2652300	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG002_chrY_T0000320;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000320;transcript_name=HG002_chrY_T0000320;gene_name=ZFY;ID=exon:HG002_chrY_T0000320:3;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2652151	2652300	.	+	2	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG002_chrY_T0000320;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000320;transcript_name=HG002_chrY_T0000320;gene_name=ZFY;ID=CDS:HG002_chrY_T0000320:2;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2652301	2652566	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG002_chrY_T0000320;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000320;transcript_name=HG002_chrY_T0000320;gene_name=ZFY;ID=intron:HG002_chrY_T0000320:3;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2652567	2652710	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG002_chrY_T0000320;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000320;transcript_name=HG002_chrY_T0000320;gene_name=ZFY;ID=exon:HG002_chrY_T0000320:4;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2652567	2652710	.	+	2	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG002_chrY_T0000320;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000320;transcript_name=HG002_chrY_T0000320;gene_name=ZFY;ID=CDS:HG002_chrY_T0000320:3;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2652711	2653725	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG002_chrY_T0000320;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000320;transcript_name=HG002_chrY_T0000320;gene_name=ZFY;ID=intron:HG002_chrY_T0000320:4;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2653726	2653878	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG002_chrY_T0000320;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000320;transcript_name=HG002_chrY_T0000320;gene_name=ZFY;ID=exon:HG002_chrY_T0000320:5;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2653726	2653878	.	+	2	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG002_chrY_T0000320;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000320;transcript_name=HG002_chrY_T0000320;gene_name=ZFY;ID=CDS:HG002_chrY_T0000320:4;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2653879	2654994	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG002_chrY_T0000320;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000320;transcript_name=HG002_chrY_T0000320;gene_name=ZFY;ID=intron:HG002_chrY_T0000320:5;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2654995	2655135	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG002_chrY_T0000320;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000320;transcript_name=HG002_chrY_T0000320;gene_name=ZFY;ID=exon:HG002_chrY_T0000320:6;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2654995	2655135	.	+	2	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG002_chrY_T0000320;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000320;transcript_name=HG002_chrY_T0000320;gene_name=ZFY;ID=CDS:HG002_chrY_T0000320:5;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2655136	2655864	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG002_chrY_T0000320;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000320;transcript_name=HG002_chrY_T0000320;gene_name=ZFY;ID=intron:HG002_chrY_T0000320:6;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2655865	2659561	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG002_chrY_T0000320;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000320;transcript_name=HG002_chrY_T0000320;gene_name=ZFY;ID=exon:HG002_chrY_T0000320:7;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2655865	2657048	.	+	2	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG002_chrY_T0000320;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000320;transcript_name=HG002_chrY_T0000320;gene_name=ZFY;ID=CDS:HG002_chrY_T0000320:6;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	2657046	2657048	.	+	0	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG002_chrY_T0000320;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000320;transcript_name=HG002_chrY_T0000320;gene_name=ZFY;ID=stop_codon:HG002_chrY_T0000320;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2612466	2657402	100	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG002_chrY_T0000321;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_G0000065;transcript_name=HG002_chrY_T0000321;gene_name=ZFY;ID=HG002_chrY_T0000321;Name=ZFY
HG002_chrY	CAT	exon	2612466	2612523	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG002_chrY_T0000321;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000321;transcript_name=HG002_chrY_T0000321;gene_name=ZFY;ID=exon:HG002_chrY_T0000321:0;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2612524	2630965	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG002_chrY_T0000321;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000321;transcript_name=HG002_chrY_T0000321;gene_name=ZFY;ID=intron:HG002_chrY_T0000321:0;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2630966	2631054	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG002_chrY_T0000321;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000321;transcript_name=HG002_chrY_T0000321;gene_name=ZFY;ID=exon:HG002_chrY_T0000321:1;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2630994	2631054	.	+	0	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG002_chrY_T0000321;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000321;transcript_name=HG002_chrY_T0000321;gene_name=ZFY;ID=CDS:HG002_chrY_T0000321:0;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	2630994	2630996	.	+	0	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG002_chrY_T0000321;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000321;transcript_name=HG002_chrY_T0000321;gene_name=ZFY;ID=start_codon:HG002_chrY_T0000321;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2631055	2652150	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG002_chrY_T0000321;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000321;transcript_name=HG002_chrY_T0000321;gene_name=ZFY;ID=intron:HG002_chrY_T0000321:1;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2652151	2652300	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG002_chrY_T0000321;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000321;transcript_name=HG002_chrY_T0000321;gene_name=ZFY;ID=exon:HG002_chrY_T0000321:2;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2652151	2652300	.	+	2	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG002_chrY_T0000321;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000321;transcript_name=HG002_chrY_T0000321;gene_name=ZFY;ID=CDS:HG002_chrY_T0000321:1;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2652301	2652566	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG002_chrY_T0000321;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000321;transcript_name=HG002_chrY_T0000321;gene_name=ZFY;ID=intron:HG002_chrY_T0000321:2;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2652567	2652710	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG002_chrY_T0000321;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000321;transcript_name=HG002_chrY_T0000321;gene_name=ZFY;ID=exon:HG002_chrY_T0000321:3;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2652567	2652710	.	+	2	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG002_chrY_T0000321;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000321;transcript_name=HG002_chrY_T0000321;gene_name=ZFY;ID=CDS:HG002_chrY_T0000321:2;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2652711	2653725	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG002_chrY_T0000321;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000321;transcript_name=HG002_chrY_T0000321;gene_name=ZFY;ID=intron:HG002_chrY_T0000321:3;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2653726	2653878	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG002_chrY_T0000321;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000321;transcript_name=HG002_chrY_T0000321;gene_name=ZFY;ID=exon:HG002_chrY_T0000321:4;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2653726	2653878	.	+	2	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG002_chrY_T0000321;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000321;transcript_name=HG002_chrY_T0000321;gene_name=ZFY;ID=CDS:HG002_chrY_T0000321:3;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2653879	2654994	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG002_chrY_T0000321;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000321;transcript_name=HG002_chrY_T0000321;gene_name=ZFY;ID=intron:HG002_chrY_T0000321:4;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2654995	2655135	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG002_chrY_T0000321;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000321;transcript_name=HG002_chrY_T0000321;gene_name=ZFY;ID=exon:HG002_chrY_T0000321:5;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2654995	2655135	.	+	2	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG002_chrY_T0000321;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000321;transcript_name=HG002_chrY_T0000321;gene_name=ZFY;ID=CDS:HG002_chrY_T0000321:4;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2655136	2655864	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG002_chrY_T0000321;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000321;transcript_name=HG002_chrY_T0000321;gene_name=ZFY;ID=intron:HG002_chrY_T0000321:5;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2655865	2657402	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG002_chrY_T0000321;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000321;transcript_name=HG002_chrY_T0000321;gene_name=ZFY;ID=exon:HG002_chrY_T0000321:6;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2655865	2657048	.	+	2	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG002_chrY_T0000321;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000321;transcript_name=HG002_chrY_T0000321;gene_name=ZFY;ID=CDS:HG002_chrY_T0000321:5;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	2657046	2657048	.	+	0	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG002_chrY_T0000321;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000321;transcript_name=HG002_chrY_T0000321;gene_name=ZFY;ID=stop_codon:HG002_chrY_T0000321;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2612577	2655108	1000	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=299.853;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=HG002_chrY_T0000322;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_G0000065;transcript_name=HG002_chrY_T0000322;gene_name=ZFY;ID=HG002_chrY_T0000322;Name=ZFY
HG002_chrY	CAT	exon	2612577	2612846	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=299.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=HG002_chrY_T0000322;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000322;transcript_name=HG002_chrY_T0000322;gene_name=ZFY;ID=exon:HG002_chrY_T0000322:0;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2612847	2652150	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=299.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=HG002_chrY_T0000322;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000322;transcript_name=HG002_chrY_T0000322;gene_name=ZFY;ID=intron:HG002_chrY_T0000322:0;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2652151	2652300	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=299.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=HG002_chrY_T0000322;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000322;transcript_name=HG002_chrY_T0000322;gene_name=ZFY;ID=exon:HG002_chrY_T0000322:1;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2652301	2652566	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=299.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=HG002_chrY_T0000322;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000322;transcript_name=HG002_chrY_T0000322;gene_name=ZFY;ID=intron:HG002_chrY_T0000322:1;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2652567	2652710	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=299.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=HG002_chrY_T0000322;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000322;transcript_name=HG002_chrY_T0000322;gene_name=ZFY;ID=exon:HG002_chrY_T0000322:2;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2652711	2654994	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=299.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=HG002_chrY_T0000322;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000322;transcript_name=HG002_chrY_T0000322;gene_name=ZFY;ID=intron:HG002_chrY_T0000322:2;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2654995	2655108	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=299.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=HG002_chrY_T0000322;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000322;transcript_name=HG002_chrY_T0000322;gene_name=ZFY;ID=exon:HG002_chrY_T0000322:3;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2612582	2638342	100	+	.	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=HG002_chrY_T0000323;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_G0000065;transcript_name=HG002_chrY_T0000323;gene_name=ZFY;ID=HG002_chrY_T0000323;Name=ZFY
HG002_chrY	CAT	exon	2612582	2612846	.	+	.	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=HG002_chrY_T0000323;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000323;transcript_name=HG002_chrY_T0000323;gene_name=ZFY;ID=exon:HG002_chrY_T0000323:0;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2612847	2630965	.	+	.	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=HG002_chrY_T0000323;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000323;transcript_name=HG002_chrY_T0000323;gene_name=ZFY;ID=intron:HG002_chrY_T0000323:0;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2630966	2631054	.	+	.	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=HG002_chrY_T0000323;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000323;transcript_name=HG002_chrY_T0000323;gene_name=ZFY;ID=exon:HG002_chrY_T0000323:1;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2630994	2631054	.	+	0	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=HG002_chrY_T0000323;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000323;transcript_name=HG002_chrY_T0000323;gene_name=ZFY;ID=CDS:HG002_chrY_T0000323:0;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	2630994	2630996	.	+	0	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=HG002_chrY_T0000323;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000323;transcript_name=HG002_chrY_T0000323;gene_name=ZFY;ID=start_codon:HG002_chrY_T0000323;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2631055	2638129	.	+	.	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=HG002_chrY_T0000323;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000323;transcript_name=HG002_chrY_T0000323;gene_name=ZFY;ID=intron:HG002_chrY_T0000323:1;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2638130	2638342	.	+	.	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=HG002_chrY_T0000323;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000323;transcript_name=HG002_chrY_T0000323;gene_name=ZFY;ID=exon:HG002_chrY_T0000323:2;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2638130	2638342	.	+	2	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=HG002_chrY_T0000323;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000323;transcript_name=HG002_chrY_T0000323;gene_name=ZFY;ID=CDS:HG002_chrY_T0000323:1;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2612728	2658201	100	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG002_chrY_T0000324;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_G0000065;transcript_name=HG002_chrY_T0000324;gene_name=ZFY;ID=HG002_chrY_T0000324;Name=ZFY
HG002_chrY	CAT	exon	2612728	2612846	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG002_chrY_T0000324;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000324;transcript_name=HG002_chrY_T0000324;gene_name=ZFY;ID=exon:HG002_chrY_T0000324:0;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2612847	2638129	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG002_chrY_T0000324;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000324;transcript_name=HG002_chrY_T0000324;gene_name=ZFY;ID=intron:HG002_chrY_T0000324:0;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2638130	2638702	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG002_chrY_T0000324;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000324;transcript_name=HG002_chrY_T0000324;gene_name=ZFY;ID=exon:HG002_chrY_T0000324:1;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2638147	2638702	.	+	0	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG002_chrY_T0000324;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000324;transcript_name=HG002_chrY_T0000324;gene_name=ZFY;ID=CDS:HG002_chrY_T0000324:0;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	2638147	2638149	.	+	0	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG002_chrY_T0000324;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000324;transcript_name=HG002_chrY_T0000324;gene_name=ZFY;ID=start_codon:HG002_chrY_T0000324;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2638703	2652150	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG002_chrY_T0000324;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000324;transcript_name=HG002_chrY_T0000324;gene_name=ZFY;ID=intron:HG002_chrY_T0000324:1;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2652151	2652300	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG002_chrY_T0000324;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000324;transcript_name=HG002_chrY_T0000324;gene_name=ZFY;ID=exon:HG002_chrY_T0000324:2;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2652151	2652300	.	+	2	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG002_chrY_T0000324;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000324;transcript_name=HG002_chrY_T0000324;gene_name=ZFY;ID=CDS:HG002_chrY_T0000324:1;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2652301	2652566	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG002_chrY_T0000324;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000324;transcript_name=HG002_chrY_T0000324;gene_name=ZFY;ID=intron:HG002_chrY_T0000324:2;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2652567	2652710	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG002_chrY_T0000324;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000324;transcript_name=HG002_chrY_T0000324;gene_name=ZFY;ID=exon:HG002_chrY_T0000324:3;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2652567	2652710	.	+	2	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG002_chrY_T0000324;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000324;transcript_name=HG002_chrY_T0000324;gene_name=ZFY;ID=CDS:HG002_chrY_T0000324:2;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2652711	2654994	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG002_chrY_T0000324;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000324;transcript_name=HG002_chrY_T0000324;gene_name=ZFY;ID=intron:HG002_chrY_T0000324:3;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2654995	2655135	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG002_chrY_T0000324;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000324;transcript_name=HG002_chrY_T0000324;gene_name=ZFY;ID=exon:HG002_chrY_T0000324:4;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2654995	2655135	.	+	2	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG002_chrY_T0000324;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000324;transcript_name=HG002_chrY_T0000324;gene_name=ZFY;ID=CDS:HG002_chrY_T0000324:3;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2655136	2655864	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG002_chrY_T0000324;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000324;transcript_name=HG002_chrY_T0000324;gene_name=ZFY;ID=intron:HG002_chrY_T0000324:4;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2655865	2658201	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG002_chrY_T0000324;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000324;transcript_name=HG002_chrY_T0000324;gene_name=ZFY;ID=exon:HG002_chrY_T0000324:5;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	2655865	2657048	.	+	2	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG002_chrY_T0000324;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000324;transcript_name=HG002_chrY_T0000324;gene_name=ZFY;ID=CDS:HG002_chrY_T0000324:4;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	2657046	2657048	.	+	0	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG002_chrY_T0000324;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000324;transcript_name=HG002_chrY_T0000324;gene_name=ZFY;ID=stop_codon:HG002_chrY_T0000324;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2654874	2656405	1000	+	.	source_transcript=ENST00000478783.1;source_transcript_name=ZFY-206;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000478783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478783.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000478783.1,ENST00000478783.1;transcript_id=HG002_chrY_T0000326;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_G0000065;transcript_name=HG002_chrY_T0000326;gene_name=ZFY;ID=HG002_chrY_T0000326;Name=ZFY
HG002_chrY	CAT	exon	2654874	2655135	.	+	.	source_transcript=ENST00000478783.1;source_transcript_name=ZFY-206;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000478783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478783.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000478783.1,ENST00000478783.1;transcript_id=HG002_chrY_T0000326;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000326;transcript_name=HG002_chrY_T0000326;gene_name=ZFY;ID=exon:HG002_chrY_T0000326:0;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2655136	2655864	.	+	.	source_transcript=ENST00000478783.1;source_transcript_name=ZFY-206;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000478783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478783.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000478783.1,ENST00000478783.1;transcript_id=HG002_chrY_T0000326;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000326;transcript_name=HG002_chrY_T0000326;gene_name=ZFY;ID=intron:HG002_chrY_T0000326:0;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2655865	2656405	.	+	.	source_transcript=ENST00000478783.1;source_transcript_name=ZFY-206;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000478783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478783.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000478783.1,ENST00000478783.1;transcript_id=HG002_chrY_T0000326;gene_id=HG002_chrY_G0000065;Parent=HG002_chrY_T0000326;transcript_name=HG002_chrY_T0000326;gene_name=ZFY;ID=exon:HG002_chrY_T0000326:1;Name=ZFY;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	2643885	2679626	.	-	.	source_gene_common_name=ZFY-AS1;source_gene=ENSG00000233070.2;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;gene_id=HG002_chrY_G0000066;gene_biotype=lncRNA;gene_name=ZFY-AS1;gene_sources=liftoff;ID=HG002_chrY_G0000066;Name=ZFY-AS1
HG002_chrY	CAT	transcript	2643885	2679873	1000	-	.	source_transcript=ENST00000417305.2;source_transcript_name=ZFY-AS1-201;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417305.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417305.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;transcript_id=HG002_chrY_T0000325;gene_id=HG002_chrY_G0000066;Parent=HG002_chrY_G0000066;transcript_name=HG002_chrY_T0000325;gene_name=ZFY-AS1;ID=HG002_chrY_T0000325;Name=ZFY-AS1
HG002_chrY	CAT	exon	2643885	2643995	.	-	.	source_transcript=ENST00000417305.2;source_transcript_name=ZFY-AS1-201;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417305.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417305.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;transcript_id=HG002_chrY_T0000325;gene_id=HG002_chrY_G0000066;Parent=HG002_chrY_T0000325;transcript_name=HG002_chrY_T0000325;gene_name=ZFY-AS1;ID=exon:HG002_chrY_T0000325:0;Name=ZFY-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2643996	2658892	.	-	.	source_transcript=ENST00000417305.2;source_transcript_name=ZFY-AS1-201;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417305.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417305.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;transcript_id=HG002_chrY_T0000325;gene_id=HG002_chrY_G0000066;Parent=HG002_chrY_T0000325;transcript_name=HG002_chrY_T0000325;gene_name=ZFY-AS1;ID=intron:HG002_chrY_T0000325:0;Name=ZFY-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2658893	2658982	.	-	.	source_transcript=ENST00000417305.2;source_transcript_name=ZFY-AS1-201;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417305.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417305.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;transcript_id=HG002_chrY_T0000325;gene_id=HG002_chrY_G0000066;Parent=HG002_chrY_T0000325;transcript_name=HG002_chrY_T0000325;gene_name=ZFY-AS1;ID=exon:HG002_chrY_T0000325:1;Name=ZFY-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2658983	2679367	.	-	.	source_transcript=ENST00000417305.2;source_transcript_name=ZFY-AS1-201;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417305.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417305.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;transcript_id=HG002_chrY_T0000325;gene_id=HG002_chrY_G0000066;Parent=HG002_chrY_T0000325;transcript_name=HG002_chrY_T0000325;gene_name=ZFY-AS1;ID=intron:HG002_chrY_T0000325:1;Name=ZFY-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2679368	2679873	.	-	.	source_transcript=ENST00000417305.2;source_transcript_name=ZFY-AS1-201;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417305.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417305.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;transcript_id=HG002_chrY_T0000325;gene_id=HG002_chrY_G0000066;Parent=HG002_chrY_T0000325;transcript_name=HG002_chrY_T0000325;gene_name=ZFY-AS1;ID=exon:HG002_chrY_T0000325:2;Name=ZFY-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2678681	2679856	1000	-	.	source_transcript=ENST00000758822.1;source_transcript_name=ZFY-AS1-203;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000758822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000758822.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000758822.1,ENST00000758822.1;transcript_id=HG002_chrY_T0000328;gene_id=HG002_chrY_G0000066;Parent=HG002_chrY_G0000066;transcript_name=HG002_chrY_T0000328;gene_name=ZFY-AS1;ID=HG002_chrY_T0000328;Name=ZFY-AS1
HG002_chrY	CAT	exon	2678681	2678978	.	-	.	source_transcript=ENST00000758822.1;source_transcript_name=ZFY-AS1-203;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000758822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000758822.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000758822.1,ENST00000758822.1;transcript_id=HG002_chrY_T0000328;gene_id=HG002_chrY_G0000066;Parent=HG002_chrY_T0000328;transcript_name=HG002_chrY_T0000328;gene_name=ZFY-AS1;ID=exon:HG002_chrY_T0000328:0;Name=ZFY-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2678979	2679367	.	-	.	source_transcript=ENST00000758822.1;source_transcript_name=ZFY-AS1-203;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000758822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000758822.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000758822.1,ENST00000758822.1;transcript_id=HG002_chrY_T0000328;gene_id=HG002_chrY_G0000066;Parent=HG002_chrY_T0000328;transcript_name=HG002_chrY_T0000328;gene_name=ZFY-AS1;ID=intron:HG002_chrY_T0000328:0;Name=ZFY-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2679368	2679856	.	-	.	source_transcript=ENST00000758822.1;source_transcript_name=ZFY-AS1-203;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000758822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000758822.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000758822.1,ENST00000758822.1;transcript_id=HG002_chrY_T0000328;gene_id=HG002_chrY_G0000066;Parent=HG002_chrY_T0000328;transcript_name=HG002_chrY_T0000328;gene_name=ZFY-AS1;ID=exon:HG002_chrY_T0000328:1;Name=ZFY-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2678683	2679626	1000	-	.	source_transcript=ENST00000431145.1;source_transcript_name=ZFY-AS1-202;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000431145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431145.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000431145.1,ENST00000431145.1;transcript_id=HG002_chrY_T0000329;gene_id=HG002_chrY_G0000066;Parent=HG002_chrY_G0000066;transcript_name=HG002_chrY_T0000329;gene_name=ZFY-AS1;ID=HG002_chrY_T0000329;Name=ZFY-AS1
HG002_chrY	CAT	exon	2678683	2678978	.	-	.	source_transcript=ENST00000431145.1;source_transcript_name=ZFY-AS1-202;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000431145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431145.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000431145.1,ENST00000431145.1;transcript_id=HG002_chrY_T0000329;gene_id=HG002_chrY_G0000066;Parent=HG002_chrY_T0000329;transcript_name=HG002_chrY_T0000329;gene_name=ZFY-AS1;ID=exon:HG002_chrY_T0000329:0;Name=ZFY-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2678979	2679367	.	-	.	source_transcript=ENST00000431145.1;source_transcript_name=ZFY-AS1-202;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000431145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431145.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000431145.1,ENST00000431145.1;transcript_id=HG002_chrY_T0000329;gene_id=HG002_chrY_G0000066;Parent=HG002_chrY_T0000329;transcript_name=HG002_chrY_T0000329;gene_name=ZFY-AS1;ID=intron:HG002_chrY_T0000329:0;Name=ZFY-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2679368	2679456	.	-	.	source_transcript=ENST00000431145.1;source_transcript_name=ZFY-AS1-202;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000431145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431145.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000431145.1,ENST00000431145.1;transcript_id=HG002_chrY_T0000329;gene_id=HG002_chrY_G0000066;Parent=HG002_chrY_T0000329;transcript_name=HG002_chrY_T0000329;gene_name=ZFY-AS1;ID=exon:HG002_chrY_T0000329:1;Name=ZFY-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2679457	2679592	.	-	.	source_transcript=ENST00000431145.1;source_transcript_name=ZFY-AS1-202;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000431145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431145.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000431145.1,ENST00000431145.1;transcript_id=HG002_chrY_T0000329;gene_id=HG002_chrY_G0000066;Parent=HG002_chrY_T0000329;transcript_name=HG002_chrY_T0000329;gene_name=ZFY-AS1;ID=intron:HG002_chrY_T0000329:1;Name=ZFY-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2679593	2679626	.	-	.	source_transcript=ENST00000431145.1;source_transcript_name=ZFY-AS1-202;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000431145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431145.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000431145.1,ENST00000431145.1;transcript_id=HG002_chrY_T0000329;gene_id=HG002_chrY_G0000066;Parent=HG002_chrY_T0000329;transcript_name=HG002_chrY_T0000329;gene_name=ZFY-AS1;ID=exon:HG002_chrY_T0000329:2;Name=ZFY-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	2672122	2672328	.	-	.	source_gene_common_name=EEF1A1P41;source_gene=ENSG00000223600.1;alternative_source_transcripts=ENST00000414667.1,ENST00000414667.1;gene_id=HG002_chrY_G0000067;gene_biotype=processed_pseudogene;gene_name=EEF1A1P41;gene_sources=liftoff;ID=HG002_chrY_G0000067;Name=EEF1A1P41
HG002_chrY	CAT	transcript	2672122	2672328	1000	-	.	source_transcript=ENST00000414667.1;source_transcript_name=EEF1A1P41-201;source_gene=ENSG00000223600.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223600.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414667.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EEF1A1P41;alternative_source_transcripts=ENST00000414667.1,ENST00000414667.1;transcript_id=HG002_chrY_T0000327;gene_id=HG002_chrY_G0000067;Parent=HG002_chrY_G0000067;transcript_name=HG002_chrY_T0000327;gene_name=EEF1A1P41;ID=HG002_chrY_T0000327;Name=EEF1A1P41
HG002_chrY	CAT	exon	2672122	2672328	.	-	.	source_transcript=ENST00000414667.1;source_transcript_name=EEF1A1P41-201;source_gene=ENSG00000223600.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223600.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414667.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EEF1A1P41;alternative_source_transcripts=ENST00000414667.1,ENST00000414667.1;transcript_id=HG002_chrY_T0000327;gene_id=HG002_chrY_G0000067;Parent=HG002_chrY_T0000327;transcript_name=HG002_chrY_T0000327;gene_name=EEF1A1P41;ID=exon:HG002_chrY_T0000327:0;Name=EEF1A1P41;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	2679942	2877546	.	+	.	source_gene_common_name=LINC00278;source_gene=ENSG00000231535.9;alternative_source_transcripts=ENST00000654222.1,ENST00000654222.1;gene_id=HG002_chrY_G0000068;gene_biotype=lncRNA;gene_name=LINC00278;gene_sources=liftoff;ID=HG002_chrY_G0000068;Name=LINC00278
HG002_chrY	CAT	transcript	2679942	2681081	1000	+	.	source_transcript=ENST00000654222.1;source_transcript_name=LINC00278-206;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654222.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000654222.1,ENST00000654222.1;transcript_id=HG002_chrY_T0000330;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_G0000068;transcript_name=HG002_chrY_T0000330;gene_name=LINC00278;ID=HG002_chrY_T0000330;Name=LINC00278
HG002_chrY	CAT	exon	2679942	2681081	.	+	.	source_transcript=ENST00000654222.1;source_transcript_name=LINC00278-206;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000654222.1,ENST00000654222.1;transcript_id=HG002_chrY_T0000330;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000330;transcript_name=HG002_chrY_T0000330;gene_name=LINC00278;ID=exon:HG002_chrY_T0000330:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2679942	2797656	1000	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG002_chrY_T0000331;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_G0000068;transcript_name=HG002_chrY_T0000331;gene_name=LINC00278;ID=HG002_chrY_T0000331;Name=LINC00278
HG002_chrY	CAT	exon	2679942	2680272	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG002_chrY_T0000331;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000331;transcript_name=HG002_chrY_T0000331;gene_name=LINC00278;ID=exon:HG002_chrY_T0000331:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2680273	2735703	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG002_chrY_T0000331;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000331;transcript_name=HG002_chrY_T0000331;gene_name=LINC00278;ID=intron:HG002_chrY_T0000331:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2735704	2735831	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG002_chrY_T0000331;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000331;transcript_name=HG002_chrY_T0000331;gene_name=LINC00278;ID=exon:HG002_chrY_T0000331:1;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2735832	2756324	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG002_chrY_T0000331;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000331;transcript_name=HG002_chrY_T0000331;gene_name=LINC00278;ID=intron:HG002_chrY_T0000331:1;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2756325	2756382	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG002_chrY_T0000331;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000331;transcript_name=HG002_chrY_T0000331;gene_name=LINC00278;ID=exon:HG002_chrY_T0000331:2;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2756383	2774040	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG002_chrY_T0000331;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000331;transcript_name=HG002_chrY_T0000331;gene_name=LINC00278;ID=intron:HG002_chrY_T0000331:2;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2774041	2774099	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG002_chrY_T0000331;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000331;transcript_name=HG002_chrY_T0000331;gene_name=LINC00278;ID=exon:HG002_chrY_T0000331:3;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2774100	2788325	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG002_chrY_T0000331;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000331;transcript_name=HG002_chrY_T0000331;gene_name=LINC00278;ID=intron:HG002_chrY_T0000331:3;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2788326	2788391	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG002_chrY_T0000331;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000331;transcript_name=HG002_chrY_T0000331;gene_name=LINC00278;ID=exon:HG002_chrY_T0000331:4;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2788392	2797472	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG002_chrY_T0000331;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000331;transcript_name=HG002_chrY_T0000331;gene_name=LINC00278;ID=intron:HG002_chrY_T0000331:4;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2797473	2797656	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG002_chrY_T0000331;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000331;transcript_name=HG002_chrY_T0000331;gene_name=LINC00278;ID=exon:HG002_chrY_T0000331:5;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2679942	2877546	1000	+	.	source_transcript=ENST00000665487.1;source_transcript_name=LINC00278-208;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000665487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000665487.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000665487.1,ENST00000665487.1;transcript_id=HG002_chrY_T0000332;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_G0000068;transcript_name=HG002_chrY_T0000332;gene_name=LINC00278;ID=HG002_chrY_T0000332;Name=LINC00278
HG002_chrY	CAT	exon	2679942	2680272	.	+	.	source_transcript=ENST00000665487.1;source_transcript_name=LINC00278-208;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000665487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000665487.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000665487.1,ENST00000665487.1;transcript_id=HG002_chrY_T0000332;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000332;transcript_name=HG002_chrY_T0000332;gene_name=LINC00278;ID=exon:HG002_chrY_T0000332:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2680273	2876536	.	+	.	source_transcript=ENST00000665487.1;source_transcript_name=LINC00278-208;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000665487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000665487.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000665487.1,ENST00000665487.1;transcript_id=HG002_chrY_T0000332;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000332;transcript_name=HG002_chrY_T0000332;gene_name=LINC00278;ID=intron:HG002_chrY_T0000332:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2876537	2877546	.	+	.	source_transcript=ENST00000665487.1;source_transcript_name=LINC00278-208;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000665487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000665487.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000665487.1,ENST00000665487.1;transcript_id=HG002_chrY_T0000332;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000332;transcript_name=HG002_chrY_T0000332;gene_name=LINC00278;ID=exon:HG002_chrY_T0000332:1;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2679949	2774864	1000	+	.	source_transcript=ENST00000444263.6;source_transcript_name=LINC00278-202;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444263.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000444263.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000444263.6,ENST00000444263.6;transcript_id=HG002_chrY_T0000333;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_G0000068;transcript_name=HG002_chrY_T0000333;gene_name=LINC00278;ID=HG002_chrY_T0000333;Name=LINC00278
HG002_chrY	CAT	exon	2679949	2680272	.	+	.	source_transcript=ENST00000444263.6;source_transcript_name=LINC00278-202;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444263.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000444263.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000444263.6,ENST00000444263.6;transcript_id=HG002_chrY_T0000333;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000333;transcript_name=HG002_chrY_T0000333;gene_name=LINC00278;ID=exon:HG002_chrY_T0000333:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2680273	2756324	.	+	.	source_transcript=ENST00000444263.6;source_transcript_name=LINC00278-202;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444263.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000444263.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000444263.6,ENST00000444263.6;transcript_id=HG002_chrY_T0000333;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000333;transcript_name=HG002_chrY_T0000333;gene_name=LINC00278;ID=intron:HG002_chrY_T0000333:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2756325	2756382	.	+	.	source_transcript=ENST00000444263.6;source_transcript_name=LINC00278-202;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444263.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000444263.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000444263.6,ENST00000444263.6;transcript_id=HG002_chrY_T0000333;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000333;transcript_name=HG002_chrY_T0000333;gene_name=LINC00278;ID=exon:HG002_chrY_T0000333:1;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2756383	2774037	.	+	.	source_transcript=ENST00000444263.6;source_transcript_name=LINC00278-202;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444263.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000444263.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000444263.6,ENST00000444263.6;transcript_id=HG002_chrY_T0000333;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000333;transcript_name=HG002_chrY_T0000333;gene_name=LINC00278;ID=intron:HG002_chrY_T0000333:1;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2774038	2774864	.	+	.	source_transcript=ENST00000444263.6;source_transcript_name=LINC00278-202;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444263.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000444263.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000444263.6,ENST00000444263.6;transcript_id=HG002_chrY_T0000333;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000333;transcript_name=HG002_chrY_T0000333;gene_name=LINC00278;ID=exon:HG002_chrY_T0000333:2;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2679949	2877546	1000	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=HG002_chrY_T0000334;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_G0000068;transcript_name=HG002_chrY_T0000334;gene_name=LINC00278;ID=HG002_chrY_T0000334;Name=LINC00278
HG002_chrY	CAT	exon	2679949	2680272	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=HG002_chrY_T0000334;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000334;transcript_name=HG002_chrY_T0000334;gene_name=LINC00278;ID=exon:HG002_chrY_T0000334:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2680273	2735703	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=HG002_chrY_T0000334;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000334;transcript_name=HG002_chrY_T0000334;gene_name=LINC00278;ID=intron:HG002_chrY_T0000334:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2735704	2735831	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=HG002_chrY_T0000334;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000334;transcript_name=HG002_chrY_T0000334;gene_name=LINC00278;ID=exon:HG002_chrY_T0000334:1;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2735832	2756324	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=HG002_chrY_T0000334;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000334;transcript_name=HG002_chrY_T0000334;gene_name=LINC00278;ID=intron:HG002_chrY_T0000334:1;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2756325	2756382	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=HG002_chrY_T0000334;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000334;transcript_name=HG002_chrY_T0000334;gene_name=LINC00278;ID=exon:HG002_chrY_T0000334:2;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2756383	2774037	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=HG002_chrY_T0000334;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000334;transcript_name=HG002_chrY_T0000334;gene_name=LINC00278;ID=intron:HG002_chrY_T0000334:2;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2774038	2774099	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=HG002_chrY_T0000334;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000334;transcript_name=HG002_chrY_T0000334;gene_name=LINC00278;ID=exon:HG002_chrY_T0000334:3;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2774100	2876536	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=HG002_chrY_T0000334;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000334;transcript_name=HG002_chrY_T0000334;gene_name=LINC00278;ID=intron:HG002_chrY_T0000334:3;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2876537	2877546	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=HG002_chrY_T0000334;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000334;transcript_name=HG002_chrY_T0000334;gene_name=LINC00278;ID=exon:HG002_chrY_T0000334:4;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2679949	2797742	1000	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG002_chrY_T0000335;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_G0000068;transcript_name=HG002_chrY_T0000335;gene_name=LINC00278;ID=HG002_chrY_T0000335;Name=LINC00278
HG002_chrY	CAT	exon	2679949	2680272	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG002_chrY_T0000335;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000335;transcript_name=HG002_chrY_T0000335;gene_name=LINC00278;ID=exon:HG002_chrY_T0000335:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2680273	2756324	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG002_chrY_T0000335;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000335;transcript_name=HG002_chrY_T0000335;gene_name=LINC00278;ID=intron:HG002_chrY_T0000335:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2756325	2756382	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG002_chrY_T0000335;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000335;transcript_name=HG002_chrY_T0000335;gene_name=LINC00278;ID=exon:HG002_chrY_T0000335:1;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2756383	2774037	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG002_chrY_T0000335;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000335;transcript_name=HG002_chrY_T0000335;gene_name=LINC00278;ID=intron:HG002_chrY_T0000335:1;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2774038	2774099	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG002_chrY_T0000335;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000335;transcript_name=HG002_chrY_T0000335;gene_name=LINC00278;ID=exon:HG002_chrY_T0000335:2;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2774100	2779127	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG002_chrY_T0000335;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000335;transcript_name=HG002_chrY_T0000335;gene_name=LINC00278;ID=intron:HG002_chrY_T0000335:2;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2779128	2779237	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG002_chrY_T0000335;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000335;transcript_name=HG002_chrY_T0000335;gene_name=LINC00278;ID=exon:HG002_chrY_T0000335:3;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2779238	2788325	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG002_chrY_T0000335;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000335;transcript_name=HG002_chrY_T0000335;gene_name=LINC00278;ID=intron:HG002_chrY_T0000335:3;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2788326	2788391	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG002_chrY_T0000335;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000335;transcript_name=HG002_chrY_T0000335;gene_name=LINC00278;ID=exon:HG002_chrY_T0000335:4;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2788392	2797472	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG002_chrY_T0000335;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000335;transcript_name=HG002_chrY_T0000335;gene_name=LINC00278;ID=intron:HG002_chrY_T0000335:4;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2797473	2797742	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG002_chrY_T0000335;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000335;transcript_name=HG002_chrY_T0000335;gene_name=LINC00278;ID=exon:HG002_chrY_T0000335:5;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2679949	2737291	1000	+	.	source_transcript=ENST00000685199.2;source_transcript_name=LINC00278-209;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000685199.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000685199.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000685199.2,ENST00000685199.2;transcript_id=HG002_chrY_T0000336;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_G0000068;transcript_name=HG002_chrY_T0000336;gene_name=LINC00278;ID=HG002_chrY_T0000336;Name=LINC00278
HG002_chrY	CAT	exon	2679949	2680272	.	+	.	source_transcript=ENST00000685199.2;source_transcript_name=LINC00278-209;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000685199.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000685199.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000685199.2,ENST00000685199.2;transcript_id=HG002_chrY_T0000336;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000336;transcript_name=HG002_chrY_T0000336;gene_name=LINC00278;ID=exon:HG002_chrY_T0000336:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2680273	2735703	.	+	.	source_transcript=ENST00000685199.2;source_transcript_name=LINC00278-209;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000685199.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000685199.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000685199.2,ENST00000685199.2;transcript_id=HG002_chrY_T0000336;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000336;transcript_name=HG002_chrY_T0000336;gene_name=LINC00278;ID=intron:HG002_chrY_T0000336:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2735704	2737291	.	+	.	source_transcript=ENST00000685199.2;source_transcript_name=LINC00278-209;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000685199.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000685199.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000685199.2,ENST00000685199.2;transcript_id=HG002_chrY_T0000336;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000336;transcript_name=HG002_chrY_T0000336;gene_name=LINC00278;ID=exon:HG002_chrY_T0000336:1;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2679954	2790900	1000	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=HG002_chrY_T0000337;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_G0000068;transcript_name=HG002_chrY_T0000337;gene_name=LINC00278;ID=HG002_chrY_T0000337;Name=LINC00278
HG002_chrY	CAT	exon	2679954	2680272	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=HG002_chrY_T0000337;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000337;transcript_name=HG002_chrY_T0000337;gene_name=LINC00278;ID=exon:HG002_chrY_T0000337:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2680273	2735703	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=HG002_chrY_T0000337;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000337;transcript_name=HG002_chrY_T0000337;gene_name=LINC00278;ID=intron:HG002_chrY_T0000337:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2735704	2735831	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=HG002_chrY_T0000337;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000337;transcript_name=HG002_chrY_T0000337;gene_name=LINC00278;ID=exon:HG002_chrY_T0000337:1;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2735832	2774040	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=HG002_chrY_T0000337;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000337;transcript_name=HG002_chrY_T0000337;gene_name=LINC00278;ID=intron:HG002_chrY_T0000337:1;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2774041	2774099	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=HG002_chrY_T0000337;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000337;transcript_name=HG002_chrY_T0000337;gene_name=LINC00278;ID=exon:HG002_chrY_T0000337:2;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2774100	2788325	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=HG002_chrY_T0000337;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000337;transcript_name=HG002_chrY_T0000337;gene_name=LINC00278;ID=intron:HG002_chrY_T0000337:2;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2788326	2788391	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=HG002_chrY_T0000337;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000337;transcript_name=HG002_chrY_T0000337;gene_name=LINC00278;ID=exon:HG002_chrY_T0000337:3;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2788392	2790712	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=HG002_chrY_T0000337;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000337;transcript_name=HG002_chrY_T0000337;gene_name=LINC00278;ID=intron:HG002_chrY_T0000337:3;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2790713	2790900	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=HG002_chrY_T0000337;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000337;transcript_name=HG002_chrY_T0000337;gene_name=LINC00278;ID=exon:HG002_chrY_T0000337:4;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2679956	2797656	1000	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=HG002_chrY_T0000338;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_G0000068;transcript_name=HG002_chrY_T0000338;gene_name=LINC00278;ID=HG002_chrY_T0000338;Name=LINC00278
HG002_chrY	CAT	exon	2679956	2680272	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=HG002_chrY_T0000338;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000338;transcript_name=HG002_chrY_T0000338;gene_name=LINC00278;ID=exon:HG002_chrY_T0000338:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2680273	2735703	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=HG002_chrY_T0000338;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000338;transcript_name=HG002_chrY_T0000338;gene_name=LINC00278;ID=intron:HG002_chrY_T0000338:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2735704	2735831	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=HG002_chrY_T0000338;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000338;transcript_name=HG002_chrY_T0000338;gene_name=LINC00278;ID=exon:HG002_chrY_T0000338:1;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2735832	2756324	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=HG002_chrY_T0000338;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000338;transcript_name=HG002_chrY_T0000338;gene_name=LINC00278;ID=intron:HG002_chrY_T0000338:1;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2756325	2756382	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=HG002_chrY_T0000338;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000338;transcript_name=HG002_chrY_T0000338;gene_name=LINC00278;ID=exon:HG002_chrY_T0000338:2;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2756383	2774037	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=HG002_chrY_T0000338;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000338;transcript_name=HG002_chrY_T0000338;gene_name=LINC00278;ID=intron:HG002_chrY_T0000338:2;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2774038	2774099	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=HG002_chrY_T0000338;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000338;transcript_name=HG002_chrY_T0000338;gene_name=LINC00278;ID=exon:HG002_chrY_T0000338:3;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2774100	2797472	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=HG002_chrY_T0000338;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000338;transcript_name=HG002_chrY_T0000338;gene_name=LINC00278;ID=intron:HG002_chrY_T0000338:3;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2797473	2797656	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=HG002_chrY_T0000338;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000338;transcript_name=HG002_chrY_T0000338;gene_name=LINC00278;ID=exon:HG002_chrY_T0000338:4;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2679956	2837893	1000	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=HG002_chrY_T0000339;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_G0000068;transcript_name=HG002_chrY_T0000339;gene_name=LINC00278;ID=HG002_chrY_T0000339;Name=LINC00278
HG002_chrY	CAT	exon	2679956	2680272	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=HG002_chrY_T0000339;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000339;transcript_name=HG002_chrY_T0000339;gene_name=LINC00278;ID=exon:HG002_chrY_T0000339:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2680273	2691958	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=HG002_chrY_T0000339;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000339;transcript_name=HG002_chrY_T0000339;gene_name=LINC00278;ID=intron:HG002_chrY_T0000339:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2691959	2692141	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=HG002_chrY_T0000339;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000339;transcript_name=HG002_chrY_T0000339;gene_name=LINC00278;ID=exon:HG002_chrY_T0000339:1;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2692142	2735703	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=HG002_chrY_T0000339;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000339;transcript_name=HG002_chrY_T0000339;gene_name=LINC00278;ID=intron:HG002_chrY_T0000339:1;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2735704	2735831	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=HG002_chrY_T0000339;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000339;transcript_name=HG002_chrY_T0000339;gene_name=LINC00278;ID=exon:HG002_chrY_T0000339:2;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2735832	2774040	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=HG002_chrY_T0000339;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000339;transcript_name=HG002_chrY_T0000339;gene_name=LINC00278;ID=intron:HG002_chrY_T0000339:2;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2774041	2774099	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=HG002_chrY_T0000339;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000339;transcript_name=HG002_chrY_T0000339;gene_name=LINC00278;ID=exon:HG002_chrY_T0000339:3;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2774100	2837713	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=HG002_chrY_T0000339;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000339;transcript_name=HG002_chrY_T0000339;gene_name=LINC00278;ID=intron:HG002_chrY_T0000339:3;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2837714	2837893	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=HG002_chrY_T0000339;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000339;transcript_name=HG002_chrY_T0000339;gene_name=LINC00278;ID=exon:HG002_chrY_T0000339:4;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2679956	2774617	1000	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=HG002_chrY_T0000340;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_G0000068;transcript_name=HG002_chrY_T0000340;gene_name=LINC00278;ID=HG002_chrY_T0000340;Name=LINC00278
HG002_chrY	CAT	exon	2679956	2680272	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=HG002_chrY_T0000340;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000340;transcript_name=HG002_chrY_T0000340;gene_name=LINC00278;ID=exon:HG002_chrY_T0000340:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2680273	2735703	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=HG002_chrY_T0000340;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000340;transcript_name=HG002_chrY_T0000340;gene_name=LINC00278;ID=intron:HG002_chrY_T0000340:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2735704	2735831	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=HG002_chrY_T0000340;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000340;transcript_name=HG002_chrY_T0000340;gene_name=LINC00278;ID=exon:HG002_chrY_T0000340:1;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2735832	2756324	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=HG002_chrY_T0000340;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000340;transcript_name=HG002_chrY_T0000340;gene_name=LINC00278;ID=intron:HG002_chrY_T0000340:1;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2756325	2756382	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=HG002_chrY_T0000340;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000340;transcript_name=HG002_chrY_T0000340;gene_name=LINC00278;ID=exon:HG002_chrY_T0000340:2;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2756383	2774037	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=HG002_chrY_T0000340;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000340;transcript_name=HG002_chrY_T0000340;gene_name=LINC00278;ID=intron:HG002_chrY_T0000340:2;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2774038	2774617	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=HG002_chrY_T0000340;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000340;transcript_name=HG002_chrY_T0000340;gene_name=LINC00278;ID=exon:HG002_chrY_T0000340:3;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2679961	2779315	1000	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=HG002_chrY_T0000341;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_G0000068;transcript_name=HG002_chrY_T0000341;gene_name=LINC00278;ID=HG002_chrY_T0000341;Name=LINC00278
HG002_chrY	CAT	exon	2679961	2680272	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=HG002_chrY_T0000341;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000341;transcript_name=HG002_chrY_T0000341;gene_name=LINC00278;ID=exon:HG002_chrY_T0000341:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2680273	2756324	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=HG002_chrY_T0000341;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000341;transcript_name=HG002_chrY_T0000341;gene_name=LINC00278;ID=intron:HG002_chrY_T0000341:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2756325	2756382	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=HG002_chrY_T0000341;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000341;transcript_name=HG002_chrY_T0000341;gene_name=LINC00278;ID=exon:HG002_chrY_T0000341:1;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2756383	2774037	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=HG002_chrY_T0000341;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000341;transcript_name=HG002_chrY_T0000341;gene_name=LINC00278;ID=intron:HG002_chrY_T0000341:1;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2774038	2774099	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=HG002_chrY_T0000341;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000341;transcript_name=HG002_chrY_T0000341;gene_name=LINC00278;ID=exon:HG002_chrY_T0000341:2;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2774100	2779127	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=HG002_chrY_T0000341;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000341;transcript_name=HG002_chrY_T0000341;gene_name=LINC00278;ID=intron:HG002_chrY_T0000341:2;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2779128	2779315	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=HG002_chrY_T0000341;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000341;transcript_name=HG002_chrY_T0000341;gene_name=LINC00278;ID=exon:HG002_chrY_T0000341:3;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2679961	2774629	1000	+	.	source_transcript=ENST00000803196.1;source_transcript_name=LINC00278-217;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803196.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803196.1,ENST00000803196.1;transcript_id=HG002_chrY_T0000342;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_G0000068;transcript_name=HG002_chrY_T0000342;gene_name=LINC00278;ID=HG002_chrY_T0000342;Name=LINC00278
HG002_chrY	CAT	exon	2679961	2680272	.	+	.	source_transcript=ENST00000803196.1;source_transcript_name=LINC00278-217;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803196.1,ENST00000803196.1;transcript_id=HG002_chrY_T0000342;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000342;transcript_name=HG002_chrY_T0000342;gene_name=LINC00278;ID=exon:HG002_chrY_T0000342:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2680273	2774037	.	+	.	source_transcript=ENST00000803196.1;source_transcript_name=LINC00278-217;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803196.1,ENST00000803196.1;transcript_id=HG002_chrY_T0000342;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000342;transcript_name=HG002_chrY_T0000342;gene_name=LINC00278;ID=intron:HG002_chrY_T0000342:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2774038	2774629	.	+	.	source_transcript=ENST00000803196.1;source_transcript_name=LINC00278-217;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803196.1,ENST00000803196.1;transcript_id=HG002_chrY_T0000342;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000342;transcript_name=HG002_chrY_T0000342;gene_name=LINC00278;ID=exon:HG002_chrY_T0000342:1;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2679967	2797739	1000	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG002_chrY_T0000343;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_G0000068;transcript_name=HG002_chrY_T0000343;gene_name=LINC00278;ID=HG002_chrY_T0000343;Name=LINC00278
HG002_chrY	CAT	exon	2679967	2680272	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG002_chrY_T0000343;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000343;transcript_name=HG002_chrY_T0000343;gene_name=LINC00278;ID=exon:HG002_chrY_T0000343:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2680273	2735703	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG002_chrY_T0000343;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000343;transcript_name=HG002_chrY_T0000343;gene_name=LINC00278;ID=intron:HG002_chrY_T0000343:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2735704	2735831	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG002_chrY_T0000343;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000343;transcript_name=HG002_chrY_T0000343;gene_name=LINC00278;ID=exon:HG002_chrY_T0000343:1;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2735832	2774037	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG002_chrY_T0000343;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000343;transcript_name=HG002_chrY_T0000343;gene_name=LINC00278;ID=intron:HG002_chrY_T0000343:1;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2774038	2774099	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG002_chrY_T0000343;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000343;transcript_name=HG002_chrY_T0000343;gene_name=LINC00278;ID=exon:HG002_chrY_T0000343:2;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2774100	2779127	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG002_chrY_T0000343;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000343;transcript_name=HG002_chrY_T0000343;gene_name=LINC00278;ID=intron:HG002_chrY_T0000343:2;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2779128	2779237	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG002_chrY_T0000343;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000343;transcript_name=HG002_chrY_T0000343;gene_name=LINC00278;ID=exon:HG002_chrY_T0000343:3;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2779238	2788325	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG002_chrY_T0000343;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000343;transcript_name=HG002_chrY_T0000343;gene_name=LINC00278;ID=intron:HG002_chrY_T0000343:3;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2788326	2788391	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG002_chrY_T0000343;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000343;transcript_name=HG002_chrY_T0000343;gene_name=LINC00278;ID=exon:HG002_chrY_T0000343:4;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2788392	2797472	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG002_chrY_T0000343;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000343;transcript_name=HG002_chrY_T0000343;gene_name=LINC00278;ID=intron:HG002_chrY_T0000343:4;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2797473	2797739	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG002_chrY_T0000343;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000343;transcript_name=HG002_chrY_T0000343;gene_name=LINC00278;ID=exon:HG002_chrY_T0000343:5;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2679967	2790900	1000	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=HG002_chrY_T0000344;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_G0000068;transcript_name=HG002_chrY_T0000344;gene_name=LINC00278;ID=HG002_chrY_T0000344;Name=LINC00278
HG002_chrY	CAT	exon	2679967	2680272	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=HG002_chrY_T0000344;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000344;transcript_name=HG002_chrY_T0000344;gene_name=LINC00278;ID=exon:HG002_chrY_T0000344:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2680273	2735703	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=HG002_chrY_T0000344;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000344;transcript_name=HG002_chrY_T0000344;gene_name=LINC00278;ID=intron:HG002_chrY_T0000344:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2735704	2735831	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=HG002_chrY_T0000344;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000344;transcript_name=HG002_chrY_T0000344;gene_name=LINC00278;ID=exon:HG002_chrY_T0000344:1;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2735832	2788325	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=HG002_chrY_T0000344;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000344;transcript_name=HG002_chrY_T0000344;gene_name=LINC00278;ID=intron:HG002_chrY_T0000344:1;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2788326	2788391	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=HG002_chrY_T0000344;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000344;transcript_name=HG002_chrY_T0000344;gene_name=LINC00278;ID=exon:HG002_chrY_T0000344:2;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2788392	2790712	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=HG002_chrY_T0000344;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000344;transcript_name=HG002_chrY_T0000344;gene_name=LINC00278;ID=intron:HG002_chrY_T0000344:2;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2790713	2790900	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=HG002_chrY_T0000344;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000344;transcript_name=HG002_chrY_T0000344;gene_name=LINC00278;ID=exon:HG002_chrY_T0000344:3;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2679967	2790900	1000	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG002_chrY_T0000345;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_G0000068;transcript_name=HG002_chrY_T0000345;gene_name=LINC00278;ID=HG002_chrY_T0000345;Name=LINC00278
HG002_chrY	CAT	exon	2679967	2680272	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG002_chrY_T0000345;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000345;transcript_name=HG002_chrY_T0000345;gene_name=LINC00278;ID=exon:HG002_chrY_T0000345:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2680273	2735703	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG002_chrY_T0000345;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000345;transcript_name=HG002_chrY_T0000345;gene_name=LINC00278;ID=intron:HG002_chrY_T0000345:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2735704	2735831	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG002_chrY_T0000345;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000345;transcript_name=HG002_chrY_T0000345;gene_name=LINC00278;ID=exon:HG002_chrY_T0000345:1;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2735832	2756324	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG002_chrY_T0000345;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000345;transcript_name=HG002_chrY_T0000345;gene_name=LINC00278;ID=intron:HG002_chrY_T0000345:1;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2756325	2756382	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG002_chrY_T0000345;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000345;transcript_name=HG002_chrY_T0000345;gene_name=LINC00278;ID=exon:HG002_chrY_T0000345:2;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2756383	2774037	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG002_chrY_T0000345;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000345;transcript_name=HG002_chrY_T0000345;gene_name=LINC00278;ID=intron:HG002_chrY_T0000345:2;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2774038	2774099	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG002_chrY_T0000345;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000345;transcript_name=HG002_chrY_T0000345;gene_name=LINC00278;ID=exon:HG002_chrY_T0000345:3;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2774100	2788325	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG002_chrY_T0000345;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000345;transcript_name=HG002_chrY_T0000345;gene_name=LINC00278;ID=intron:HG002_chrY_T0000345:3;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2788326	2788391	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG002_chrY_T0000345;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000345;transcript_name=HG002_chrY_T0000345;gene_name=LINC00278;ID=exon:HG002_chrY_T0000345:4;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2788392	2790712	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG002_chrY_T0000345;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000345;transcript_name=HG002_chrY_T0000345;gene_name=LINC00278;ID=intron:HG002_chrY_T0000345:4;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2790713	2790900	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG002_chrY_T0000345;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000345;transcript_name=HG002_chrY_T0000345;gene_name=LINC00278;ID=exon:HG002_chrY_T0000345:5;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2680056	2787358	1000	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=HG002_chrY_T0000346;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_G0000068;transcript_name=HG002_chrY_T0000346;gene_name=LINC00278;ID=HG002_chrY_T0000346;Name=LINC00278
HG002_chrY	CAT	exon	2680056	2680272	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=HG002_chrY_T0000346;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000346;transcript_name=HG002_chrY_T0000346;gene_name=LINC00278;ID=exon:HG002_chrY_T0000346:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2680273	2735703	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=HG002_chrY_T0000346;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000346;transcript_name=HG002_chrY_T0000346;gene_name=LINC00278;ID=intron:HG002_chrY_T0000346:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2735704	2735831	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=HG002_chrY_T0000346;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000346;transcript_name=HG002_chrY_T0000346;gene_name=LINC00278;ID=exon:HG002_chrY_T0000346:1;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2735832	2774037	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=HG002_chrY_T0000346;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000346;transcript_name=HG002_chrY_T0000346;gene_name=LINC00278;ID=intron:HG002_chrY_T0000346:1;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2774038	2774099	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=HG002_chrY_T0000346;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000346;transcript_name=HG002_chrY_T0000346;gene_name=LINC00278;ID=exon:HG002_chrY_T0000346:2;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2774100	2779127	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=HG002_chrY_T0000346;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000346;transcript_name=HG002_chrY_T0000346;gene_name=LINC00278;ID=intron:HG002_chrY_T0000346:2;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2779128	2779237	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=HG002_chrY_T0000346;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000346;transcript_name=HG002_chrY_T0000346;gene_name=LINC00278;ID=exon:HG002_chrY_T0000346:3;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2779238	2786860	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=HG002_chrY_T0000346;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000346;transcript_name=HG002_chrY_T0000346;gene_name=LINC00278;ID=intron:HG002_chrY_T0000346:3;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2786861	2787358	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=HG002_chrY_T0000346;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000346;transcript_name=HG002_chrY_T0000346;gene_name=LINC00278;ID=exon:HG002_chrY_T0000346:4;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	2680064	2788164	1000	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=HG002_chrY_T0000347;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_G0000068;transcript_name=HG002_chrY_T0000347;gene_name=LINC00278;ID=HG002_chrY_T0000347;Name=LINC00278
HG002_chrY	CAT	exon	2680064	2680272	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=HG002_chrY_T0000347;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000347;transcript_name=HG002_chrY_T0000347;gene_name=LINC00278;ID=exon:HG002_chrY_T0000347:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2680273	2756324	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=HG002_chrY_T0000347;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000347;transcript_name=HG002_chrY_T0000347;gene_name=LINC00278;ID=intron:HG002_chrY_T0000347:0;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2756325	2756382	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=HG002_chrY_T0000347;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000347;transcript_name=HG002_chrY_T0000347;gene_name=LINC00278;ID=exon:HG002_chrY_T0000347:1;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2756383	2774037	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=HG002_chrY_T0000347;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000347;transcript_name=HG002_chrY_T0000347;gene_name=LINC00278;ID=intron:HG002_chrY_T0000347:1;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2774038	2774099	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=HG002_chrY_T0000347;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000347;transcript_name=HG002_chrY_T0000347;gene_name=LINC00278;ID=exon:HG002_chrY_T0000347:2;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	2774100	2786860	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=HG002_chrY_T0000347;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000347;transcript_name=HG002_chrY_T0000347;gene_name=LINC00278;ID=intron:HG002_chrY_T0000347:2;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	2786861	2788164	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=HG002_chrY_T0000347;gene_id=HG002_chrY_G0000068;Parent=HG002_chrY_T0000347;transcript_name=HG002_chrY_T0000347;gene_name=LINC00278;ID=exon:HG002_chrY_T0000347:3;Name=LINC00278;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	2970848	2971866	.	+	.	source_gene_common_name=AGPAT5P1;source_gene=ENSG00000234652.1;alternative_source_transcripts=ENST00000455855.1,ENST00000455855.1;gene_id=HG002_chrY_G0000069;gene_biotype=processed_pseudogene;gene_name=AGPAT5P1;gene_sources=liftoff;ID=HG002_chrY_G0000069;Name=AGPAT5P1
HG002_chrY	CAT	transcript	2970848	2971866	1000	+	.	source_transcript=ENST00000455855.1;source_transcript_name=AGPAT5P1-201;source_gene=ENSG00000234652.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234652.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000455855.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455855.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AGPAT5P1;alternative_source_transcripts=ENST00000455855.1,ENST00000455855.1;transcript_id=HG002_chrY_T0000348;gene_id=HG002_chrY_G0000069;Parent=HG002_chrY_G0000069;transcript_name=HG002_chrY_T0000348;gene_name=AGPAT5P1;ID=HG002_chrY_T0000348;Name=AGPAT5P1
HG002_chrY	CAT	exon	2970848	2971866	.	+	.	source_transcript=ENST00000455855.1;source_transcript_name=AGPAT5P1-201;source_gene=ENSG00000234652.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234652.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000455855.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455855.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AGPAT5P1;alternative_source_transcripts=ENST00000455855.1,ENST00000455855.1;transcript_id=HG002_chrY_T0000348;gene_id=HG002_chrY_G0000069;Parent=HG002_chrY_T0000348;transcript_name=HG002_chrY_T0000348;gene_name=AGPAT5P1;ID=exon:HG002_chrY_T0000348:0;Name=AGPAT5P1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	3226735	3226893	.	-	.	source_gene_common_name=PRRC2CP1;source_gene=ENSG00000216777.1;alternative_source_transcripts=ENST00000404428.1,ENST00000404428.1;gene_id=HG002_chrY_G0000070;gene_biotype=processed_pseudogene;gene_name=PRRC2CP1;gene_sources=liftoff;ID=HG002_chrY_G0000070;Name=PRRC2CP1
HG002_chrY	CAT	transcript	3226735	3226893	1000	-	.	source_transcript=ENST00000404428.1;source_transcript_name=PRRC2CP1-201;source_gene=ENSG00000216777.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000216777.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000404428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000404428.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRRC2CP1;alternative_source_transcripts=ENST00000404428.1,ENST00000404428.1;transcript_id=HG002_chrY_T0000349;gene_id=HG002_chrY_G0000070;Parent=HG002_chrY_G0000070;transcript_name=HG002_chrY_T0000349;gene_name=PRRC2CP1;ID=HG002_chrY_T0000349;Name=PRRC2CP1
HG002_chrY	CAT	exon	3226735	3226893	.	-	.	source_transcript=ENST00000404428.1;source_transcript_name=PRRC2CP1-201;source_gene=ENSG00000216777.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000216777.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000404428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000404428.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRRC2CP1;alternative_source_transcripts=ENST00000404428.1,ENST00000404428.1;transcript_id=HG002_chrY_T0000349;gene_id=HG002_chrY_G0000070;Parent=HG002_chrY_T0000349;transcript_name=HG002_chrY_T0000349;gene_name=PRRC2CP1;ID=exon:HG002_chrY_T0000349:0;Name=PRRC2CP1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	3256156	3257130	.	+	.	source_gene_common_name=TGIF2LY;source_gene=ENSG00000176679.9;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;gene_id=HG002_chrY_G0000071;gene_biotype=protein_coding;gene_name=TGIF2LY;gene_sources=liftoff;ID=HG002_chrY_G0000071;Name=TGIF2LY
HG002_chrY	CAT	transcript	3256156	3257130	100	+	.	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=HG002_chrY_T0000350;gene_id=HG002_chrY_G0000071;Parent=HG002_chrY_G0000071;transcript_name=HG002_chrY_T0000350;gene_name=TGIF2LY;ID=HG002_chrY_T0000350;Name=TGIF2LY
HG002_chrY	CAT	exon	3256156	3256216	.	+	.	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=HG002_chrY_T0000350;gene_id=HG002_chrY_G0000071;Parent=HG002_chrY_T0000350;transcript_name=HG002_chrY_T0000350;gene_name=TGIF2LY;ID=exon:HG002_chrY_T0000350:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	3256217	3256312	.	+	.	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=HG002_chrY_T0000350;gene_id=HG002_chrY_G0000071;Parent=HG002_chrY_T0000350;transcript_name=HG002_chrY_T0000350;gene_name=TGIF2LY;ID=intron:HG002_chrY_T0000350:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	3256313	3257130	.	+	.	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=HG002_chrY_T0000350;gene_id=HG002_chrY_G0000071;Parent=HG002_chrY_T0000350;transcript_name=HG002_chrY_T0000350;gene_name=TGIF2LY;ID=exon:HG002_chrY_T0000350:1;Name=TGIF2LY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	3256334	3256891	.	+	0	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=HG002_chrY_T0000350;gene_id=HG002_chrY_G0000071;Parent=HG002_chrY_T0000350;transcript_name=HG002_chrY_T0000350;gene_name=TGIF2LY;ID=CDS:HG002_chrY_T0000350:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	3256334	3256336	.	+	0	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=HG002_chrY_T0000350;gene_id=HG002_chrY_G0000071;Parent=HG002_chrY_T0000350;transcript_name=HG002_chrY_T0000350;gene_name=TGIF2LY;ID=start_codon:HG002_chrY_T0000350;Name=TGIF2LY;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	3256889	3256891	.	+	0	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=HG002_chrY_T0000350;gene_id=HG002_chrY_G0000071;Parent=HG002_chrY_T0000350;transcript_name=HG002_chrY_T0000350;gene_name=TGIF2LY;ID=stop_codon:HG002_chrY_T0000350;Name=TGIF2LY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	3256204	3257130	100	+	.	source_transcript=ENST00000559055.2;source_transcript_name=TGIF2LY-202;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000559055.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000559055.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000559055.2,ENST00000559055.2;transcript_id=HG002_chrY_T0000351;gene_id=HG002_chrY_G0000071;Parent=HG002_chrY_G0000071;transcript_name=HG002_chrY_T0000351;gene_name=TGIF2LY;ID=HG002_chrY_T0000351;Name=TGIF2LY
HG002_chrY	CAT	exon	3256204	3257130	.	+	.	source_transcript=ENST00000559055.2;source_transcript_name=TGIF2LY-202;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000559055.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000559055.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000559055.2,ENST00000559055.2;transcript_id=HG002_chrY_T0000351;gene_id=HG002_chrY_G0000071;Parent=HG002_chrY_T0000351;transcript_name=HG002_chrY_T0000351;gene_name=TGIF2LY;ID=exon:HG002_chrY_T0000351:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	3256334	3256891	.	+	0	source_transcript=ENST00000559055.2;source_transcript_name=TGIF2LY-202;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000559055.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000559055.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000559055.2,ENST00000559055.2;transcript_id=HG002_chrY_T0000351;gene_id=HG002_chrY_G0000071;Parent=HG002_chrY_T0000351;transcript_name=HG002_chrY_T0000351;gene_name=TGIF2LY;ID=CDS:HG002_chrY_T0000351:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	3256334	3256336	.	+	0	source_transcript=ENST00000559055.2;source_transcript_name=TGIF2LY-202;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000559055.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000559055.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000559055.2,ENST00000559055.2;transcript_id=HG002_chrY_T0000351;gene_id=HG002_chrY_G0000071;Parent=HG002_chrY_T0000351;transcript_name=HG002_chrY_T0000351;gene_name=TGIF2LY;ID=start_codon:HG002_chrY_T0000351;Name=TGIF2LY;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	3256889	3256891	.	+	0	source_transcript=ENST00000559055.2;source_transcript_name=TGIF2LY-202;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000559055.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000559055.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000559055.2,ENST00000559055.2;transcript_id=HG002_chrY_T0000351;gene_id=HG002_chrY_G0000071;Parent=HG002_chrY_T0000351;transcript_name=HG002_chrY_T0000351;gene_name=TGIF2LY;ID=stop_codon:HG002_chrY_T0000351;Name=TGIF2LY;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	3359898	3360961	.	+	.	source_gene_common_name=USP12PY;source_gene=ENSG00000232927.1;alternative_source_transcripts=ENST00000427677.1,ENST00000427677.1;gene_id=HG002_chrY_G0000072;gene_biotype=processed_pseudogene;gene_name=USP12PY;gene_sources=liftoff;ID=HG002_chrY_G0000072;Name=USP12PY
HG002_chrY	CAT	transcript	3359898	3360961	1000	+	.	source_transcript=ENST00000427677.1;source_transcript_name=USP12PY-201;source_gene=ENSG00000232927.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232927.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000427677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427677.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP12PY;alternative_source_transcripts=ENST00000427677.1,ENST00000427677.1;transcript_id=HG002_chrY_T0000352;gene_id=HG002_chrY_G0000072;Parent=HG002_chrY_G0000072;transcript_name=HG002_chrY_T0000352;gene_name=USP12PY;ID=HG002_chrY_T0000352;Name=USP12PY
HG002_chrY	CAT	exon	3359898	3360961	.	+	.	source_transcript=ENST00000427677.1;source_transcript_name=USP12PY-201;source_gene=ENSG00000232927.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232927.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000427677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427677.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP12PY;alternative_source_transcripts=ENST00000427677.1,ENST00000427677.1;transcript_id=HG002_chrY_T0000352;gene_id=HG002_chrY_G0000072;Parent=HG002_chrY_T0000352;transcript_name=HG002_chrY_T0000352;gene_name=USP12PY;ID=exon:HG002_chrY_T0000352:0;Name=USP12PY;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	3453290	3541978	.	+	.	source_gene_common_name=ENSG00000286050;source_gene=ENSG00000286050.2;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;gene_id=HG002_chrY_G0000073;gene_biotype=lncRNA;gene_name=ENSG00000286050;gene_sources=liftoff;ID=HG002_chrY_G0000073;Name=ENSG00000286050
HG002_chrY	CAT	transcript	3453290	3511593	1000	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=HG002_chrY_T0000353;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_G0000073;transcript_name=HG002_chrY_T0000353;gene_name=ENSG00000286050;ID=HG002_chrY_T0000353;Name=ENSG00000286050
HG002_chrY	CAT	exon	3453290	3453434	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=HG002_chrY_T0000353;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000353;transcript_name=HG002_chrY_T0000353;gene_name=ENSG00000286050;ID=exon:HG002_chrY_T0000353:0;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	3453435	3480901	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=HG002_chrY_T0000353;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000353;transcript_name=HG002_chrY_T0000353;gene_name=ENSG00000286050;ID=intron:HG002_chrY_T0000353:0;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	3480902	3481025	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=HG002_chrY_T0000353;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000353;transcript_name=HG002_chrY_T0000353;gene_name=ENSG00000286050;ID=exon:HG002_chrY_T0000353:1;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	3481026	3481457	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=HG002_chrY_T0000353;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000353;transcript_name=HG002_chrY_T0000353;gene_name=ENSG00000286050;ID=intron:HG002_chrY_T0000353:1;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	3481458	3481569	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=HG002_chrY_T0000353;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000353;transcript_name=HG002_chrY_T0000353;gene_name=ENSG00000286050;ID=exon:HG002_chrY_T0000353:2;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	3481570	3509487	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=HG002_chrY_T0000353;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000353;transcript_name=HG002_chrY_T0000353;gene_name=ENSG00000286050;ID=intron:HG002_chrY_T0000353:2;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	3509488	3509542	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=HG002_chrY_T0000353;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000353;transcript_name=HG002_chrY_T0000353;gene_name=ENSG00000286050;ID=exon:HG002_chrY_T0000353:3;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	3509543	3511438	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=HG002_chrY_T0000353;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000353;transcript_name=HG002_chrY_T0000353;gene_name=ENSG00000286050;ID=intron:HG002_chrY_T0000353:3;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	3511439	3511593	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=HG002_chrY_T0000353;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000353;transcript_name=HG002_chrY_T0000353;gene_name=ENSG00000286050;ID=exon:HG002_chrY_T0000353:4;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	3463371	3541978	1000	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG002_chrY_T0000355;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_G0000073;transcript_name=HG002_chrY_T0000355;gene_name=ENSG00000286050;ID=HG002_chrY_T0000355;Name=ENSG00000286050
HG002_chrY	CAT	exon	3463371	3463479	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG002_chrY_T0000355;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000355;transcript_name=HG002_chrY_T0000355;gene_name=ENSG00000286050;ID=exon:HG002_chrY_T0000355:0;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	3463480	3480901	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG002_chrY_T0000355;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000355;transcript_name=HG002_chrY_T0000355;gene_name=ENSG00000286050;ID=intron:HG002_chrY_T0000355:0;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	3480902	3481025	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG002_chrY_T0000355;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000355;transcript_name=HG002_chrY_T0000355;gene_name=ENSG00000286050;ID=exon:HG002_chrY_T0000355:1;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	3481026	3481457	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG002_chrY_T0000355;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000355;transcript_name=HG002_chrY_T0000355;gene_name=ENSG00000286050;ID=intron:HG002_chrY_T0000355:1;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	3481458	3481569	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG002_chrY_T0000355;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000355;transcript_name=HG002_chrY_T0000355;gene_name=ENSG00000286050;ID=exon:HG002_chrY_T0000355:2;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	3481570	3540658	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG002_chrY_T0000355;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000355;transcript_name=HG002_chrY_T0000355;gene_name=ENSG00000286050;ID=intron:HG002_chrY_T0000355:2;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	3540659	3540779	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG002_chrY_T0000355;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000355;transcript_name=HG002_chrY_T0000355;gene_name=ENSG00000286050;ID=exon:HG002_chrY_T0000355:3;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	3540780	3540917	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG002_chrY_T0000355;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000355;transcript_name=HG002_chrY_T0000355;gene_name=ENSG00000286050;ID=intron:HG002_chrY_T0000355:3;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	3540918	3541011	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG002_chrY_T0000355;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000355;transcript_name=HG002_chrY_T0000355;gene_name=ENSG00000286050;ID=exon:HG002_chrY_T0000355:4;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	3541012	3541477	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG002_chrY_T0000355;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000355;transcript_name=HG002_chrY_T0000355;gene_name=ENSG00000286050;ID=intron:HG002_chrY_T0000355:4;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	3541478	3541978	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG002_chrY_T0000355;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000355;transcript_name=HG002_chrY_T0000355;gene_name=ENSG00000286050;ID=exon:HG002_chrY_T0000355:5;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	3463372	3513848	1000	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=HG002_chrY_T0000356;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_G0000073;transcript_name=HG002_chrY_T0000356;gene_name=ENSG00000286050;ID=HG002_chrY_T0000356;Name=ENSG00000286050
HG002_chrY	CAT	exon	3463372	3463479	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=HG002_chrY_T0000356;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000356;transcript_name=HG002_chrY_T0000356;gene_name=ENSG00000286050;ID=exon:HG002_chrY_T0000356:0;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	3463480	3480901	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=HG002_chrY_T0000356;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000356;transcript_name=HG002_chrY_T0000356;gene_name=ENSG00000286050;ID=intron:HG002_chrY_T0000356:0;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	3480902	3481025	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=HG002_chrY_T0000356;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000356;transcript_name=HG002_chrY_T0000356;gene_name=ENSG00000286050;ID=exon:HG002_chrY_T0000356:1;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	3481026	3481457	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=HG002_chrY_T0000356;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000356;transcript_name=HG002_chrY_T0000356;gene_name=ENSG00000286050;ID=intron:HG002_chrY_T0000356:1;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	3481458	3481569	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=HG002_chrY_T0000356;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000356;transcript_name=HG002_chrY_T0000356;gene_name=ENSG00000286050;ID=exon:HG002_chrY_T0000356:2;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	3481570	3512544	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=HG002_chrY_T0000356;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000356;transcript_name=HG002_chrY_T0000356;gene_name=ENSG00000286050;ID=intron:HG002_chrY_T0000356:2;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	3512545	3512614	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=HG002_chrY_T0000356;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000356;transcript_name=HG002_chrY_T0000356;gene_name=ENSG00000286050;ID=exon:HG002_chrY_T0000356:3;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	3512615	3513074	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=HG002_chrY_T0000356;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000356;transcript_name=HG002_chrY_T0000356;gene_name=ENSG00000286050;ID=intron:HG002_chrY_T0000356:3;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	3513075	3513848	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=HG002_chrY_T0000356;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000356;transcript_name=HG002_chrY_T0000356;gene_name=ENSG00000286050;ID=exon:HG002_chrY_T0000356:4;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	3463434	3513846	1000	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG002_chrY_T0000357;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_G0000073;transcript_name=HG002_chrY_T0000357;gene_name=ENSG00000286050;ID=HG002_chrY_T0000357;Name=ENSG00000286050
HG002_chrY	CAT	exon	3463434	3463479	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG002_chrY_T0000357;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000357;transcript_name=HG002_chrY_T0000357;gene_name=ENSG00000286050;ID=exon:HG002_chrY_T0000357:0;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	3463480	3477723	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG002_chrY_T0000357;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000357;transcript_name=HG002_chrY_T0000357;gene_name=ENSG00000286050;ID=intron:HG002_chrY_T0000357:0;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	3477724	3477819	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG002_chrY_T0000357;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000357;transcript_name=HG002_chrY_T0000357;gene_name=ENSG00000286050;ID=exon:HG002_chrY_T0000357:1;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	3477820	3480901	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG002_chrY_T0000357;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000357;transcript_name=HG002_chrY_T0000357;gene_name=ENSG00000286050;ID=intron:HG002_chrY_T0000357:1;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	3480902	3481025	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG002_chrY_T0000357;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000357;transcript_name=HG002_chrY_T0000357;gene_name=ENSG00000286050;ID=exon:HG002_chrY_T0000357:2;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	3481026	3481457	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG002_chrY_T0000357;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000357;transcript_name=HG002_chrY_T0000357;gene_name=ENSG00000286050;ID=intron:HG002_chrY_T0000357:2;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	3481458	3481569	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG002_chrY_T0000357;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000357;transcript_name=HG002_chrY_T0000357;gene_name=ENSG00000286050;ID=exon:HG002_chrY_T0000357:3;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	3481570	3512544	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG002_chrY_T0000357;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000357;transcript_name=HG002_chrY_T0000357;gene_name=ENSG00000286050;ID=intron:HG002_chrY_T0000357:3;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	3512545	3512614	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG002_chrY_T0000357;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000357;transcript_name=HG002_chrY_T0000357;gene_name=ENSG00000286050;ID=exon:HG002_chrY_T0000357:4;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	3512615	3513074	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG002_chrY_T0000357;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000357;transcript_name=HG002_chrY_T0000357;gene_name=ENSG00000286050;ID=intron:HG002_chrY_T0000357:4;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	3513075	3513846	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG002_chrY_T0000357;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000357;transcript_name=HG002_chrY_T0000357;gene_name=ENSG00000286050;ID=exon:HG002_chrY_T0000357:5;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	3477762	3511593	1000	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=HG002_chrY_T0000358;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_G0000073;transcript_name=HG002_chrY_T0000358;gene_name=ENSG00000286050;ID=HG002_chrY_T0000358;Name=ENSG00000286050
HG002_chrY	CAT	exon	3477762	3477819	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=HG002_chrY_T0000358;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000358;transcript_name=HG002_chrY_T0000358;gene_name=ENSG00000286050;ID=exon:HG002_chrY_T0000358:0;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	3477820	3480901	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=HG002_chrY_T0000358;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000358;transcript_name=HG002_chrY_T0000358;gene_name=ENSG00000286050;ID=intron:HG002_chrY_T0000358:0;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	3480902	3481025	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=HG002_chrY_T0000358;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000358;transcript_name=HG002_chrY_T0000358;gene_name=ENSG00000286050;ID=exon:HG002_chrY_T0000358:1;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	3481026	3481457	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=HG002_chrY_T0000358;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000358;transcript_name=HG002_chrY_T0000358;gene_name=ENSG00000286050;ID=intron:HG002_chrY_T0000358:1;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	3481458	3481569	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=HG002_chrY_T0000358;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000358;transcript_name=HG002_chrY_T0000358;gene_name=ENSG00000286050;ID=exon:HG002_chrY_T0000358:2;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	3481570	3509487	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=HG002_chrY_T0000358;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000358;transcript_name=HG002_chrY_T0000358;gene_name=ENSG00000286050;ID=intron:HG002_chrY_T0000358:2;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	3509488	3509542	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=HG002_chrY_T0000358;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000358;transcript_name=HG002_chrY_T0000358;gene_name=ENSG00000286050;ID=exon:HG002_chrY_T0000358:3;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	3509543	3511438	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=HG002_chrY_T0000358;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000358;transcript_name=HG002_chrY_T0000358;gene_name=ENSG00000286050;ID=intron:HG002_chrY_T0000358:3;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	3511439	3511593	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=HG002_chrY_T0000358;gene_id=HG002_chrY_G0000073;Parent=HG002_chrY_T0000358;transcript_name=HG002_chrY_T0000358;gene_name=ENSG00000286050;ID=exon:HG002_chrY_T0000358:4;Name=ENSG00000286050;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	3455086	3456635	.	-	.	source_gene_common_name=RNF19BPY;source_gene=ENSG00000225653.1;alternative_source_transcripts=ENST00000458209.1,ENST00000458209.1;gene_id=HG002_chrY_G0000074;gene_biotype=processed_pseudogene;gene_name=RNF19BPY;gene_sources=liftoff;ID=HG002_chrY_G0000074;Name=RNF19BPY
HG002_chrY	CAT	transcript	3455086	3456635	1000	-	.	source_transcript=ENST00000458209.1;source_transcript_name=RNF19BPY-201;source_gene=ENSG00000225653.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225653.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000458209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458209.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNF19BPY;alternative_source_transcripts=ENST00000458209.1,ENST00000458209.1;transcript_id=HG002_chrY_T0000354;gene_id=HG002_chrY_G0000074;Parent=HG002_chrY_G0000074;transcript_name=HG002_chrY_T0000354;gene_name=RNF19BPY;ID=HG002_chrY_T0000354;Name=RNF19BPY
HG002_chrY	CAT	exon	3455086	3456635	.	-	.	source_transcript=ENST00000458209.1;source_transcript_name=RNF19BPY-201;source_gene=ENSG00000225653.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225653.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000458209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNF19BPY;alternative_source_transcripts=ENST00000458209.1,ENST00000458209.1;transcript_id=HG002_chrY_T0000354;gene_id=HG002_chrY_G0000074;Parent=HG002_chrY_T0000354;transcript_name=HG002_chrY_T0000354;gene_name=RNF19BPY;ID=exon:HG002_chrY_T0000354:0;Name=RNF19BPY;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	3528305	3529950	.	-	.	source_gene_common_name=ENSG00000218410;source_gene=ENSG00000218410.1;alternative_source_transcripts=ENST00000405035.1,ENST00000405035.1;gene_id=HG002_chrY_G0000075;gene_biotype=processed_pseudogene;gene_name=ENSG00000218410;gene_sources=liftoff;ID=HG002_chrY_G0000075;Name=ENSG00000218410
HG002_chrY	CAT	transcript	3528305	3529950	1000	-	.	source_transcript=ENST00000405035.1;source_transcript_name=ENST00000405035;source_gene=ENSG00000218410.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000218410.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000405035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000405035.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000218410;alternative_source_transcripts=ENST00000405035.1,ENST00000405035.1;transcript_id=HG002_chrY_T0000359;gene_id=HG002_chrY_G0000075;Parent=HG002_chrY_G0000075;transcript_name=HG002_chrY_T0000359;gene_name=ENSG00000218410;ID=HG002_chrY_T0000359;Name=ENSG00000218410
HG002_chrY	CAT	exon	3528305	3529950	.	-	.	source_transcript=ENST00000405035.1;source_transcript_name=ENST00000405035;source_gene=ENSG00000218410.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000218410.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000405035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000405035.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000218410;alternative_source_transcripts=ENST00000405035.1,ENST00000405035.1;transcript_id=HG002_chrY_T0000359;gene_id=HG002_chrY_G0000075;Parent=HG002_chrY_T0000359;transcript_name=HG002_chrY_T0000359;gene_name=ENSG00000218410;ID=exon:HG002_chrY_T0000359:0;Name=ENSG00000218410;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	3543387	3543803	.	-	.	source_gene_common_name=UBE2V1P3;source_gene=ENSG00000229518.1;alternative_source_transcripts=ENST00000439651.1,ENST00000439651.1;gene_id=HG002_chrY_G0000076;gene_biotype=processed_pseudogene;gene_name=UBE2V1P3;gene_sources=liftoff;ID=HG002_chrY_G0000076;Name=UBE2V1P3
HG002_chrY	CAT	transcript	3543387	3543803	1000	-	.	source_transcript=ENST00000439651.1;source_transcript_name=UBE2V1P3-201;source_gene=ENSG00000229518.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229518.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000439651.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439651.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2V1P3;alternative_source_transcripts=ENST00000439651.1,ENST00000439651.1;transcript_id=HG002_chrY_T0000360;gene_id=HG002_chrY_G0000076;Parent=HG002_chrY_G0000076;transcript_name=HG002_chrY_T0000360;gene_name=UBE2V1P3;ID=HG002_chrY_T0000360;Name=UBE2V1P3
HG002_chrY	CAT	exon	3543387	3543803	.	-	.	source_transcript=ENST00000439651.1;source_transcript_name=UBE2V1P3-201;source_gene=ENSG00000229518.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229518.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000439651.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439651.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2V1P3;alternative_source_transcripts=ENST00000439651.1,ENST00000439651.1;transcript_id=HG002_chrY_T0000360;gene_id=HG002_chrY_G0000076;Parent=HG002_chrY_T0000360;transcript_name=HG002_chrY_T0000360;gene_name=UBE2V1P3;ID=exon:HG002_chrY_T0000360:0;Name=UBE2V1P3;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	3715710	3779995	.	+	.	source_gene_common_name=ENSG00000229308;source_gene=ENSG00000229308.2;alternative_source_transcripts=ENST00000753206.1,ENST00000753206.1;gene_id=HG002_chrY_G0000077;gene_biotype=lncRNA;gene_name=ENSG00000229308;gene_sources=liftoff;ID=HG002_chrY_G0000077;Name=ENSG00000229308
HG002_chrY	CAT	transcript	3715710	3779995	1000	+	.	source_transcript=ENST00000753206.1;source_transcript_name=ENST00000753206;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000753206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000753206.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000753206.1,ENST00000753206.1;transcript_id=HG002_chrY_T0000361;gene_id=HG002_chrY_G0000077;Parent=HG002_chrY_G0000077;transcript_name=HG002_chrY_T0000361;gene_name=ENSG00000229308;ID=HG002_chrY_T0000361;Name=ENSG00000229308
HG002_chrY	CAT	exon	3715710	3715774	.	+	.	source_transcript=ENST00000753206.1;source_transcript_name=ENST00000753206;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000753206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000753206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000753206.1,ENST00000753206.1;transcript_id=HG002_chrY_T0000361;gene_id=HG002_chrY_G0000077;Parent=HG002_chrY_T0000361;transcript_name=HG002_chrY_T0000361;gene_name=ENSG00000229308;ID=exon:HG002_chrY_T0000361:0;Name=ENSG00000229308;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	3715775	3779361	.	+	.	source_transcript=ENST00000753206.1;source_transcript_name=ENST00000753206;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000753206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000753206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000753206.1,ENST00000753206.1;transcript_id=HG002_chrY_T0000361;gene_id=HG002_chrY_G0000077;Parent=HG002_chrY_T0000361;transcript_name=HG002_chrY_T0000361;gene_name=ENSG00000229308;ID=intron:HG002_chrY_T0000361:0;Name=ENSG00000229308;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	3779362	3779995	.	+	.	source_transcript=ENST00000753206.1;source_transcript_name=ENST00000753206;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000753206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000753206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000753206.1,ENST00000753206.1;transcript_id=HG002_chrY_T0000361;gene_id=HG002_chrY_G0000077;Parent=HG002_chrY_T0000361;transcript_name=HG002_chrY_T0000361;gene_name=ENSG00000229308;ID=exon:HG002_chrY_T0000361:1;Name=ENSG00000229308;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	3715827	3779995	1000	+	.	source_transcript=ENST00000426699.2;source_transcript_name=ENST00000426699;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426699.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426699.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000426699.2,ENST00000426699.2;transcript_id=HG002_chrY_T0000362;gene_id=HG002_chrY_G0000077;Parent=HG002_chrY_G0000077;transcript_name=HG002_chrY_T0000362;gene_name=ENSG00000229308;ID=HG002_chrY_T0000362;Name=ENSG00000229308
HG002_chrY	CAT	exon	3715827	3716095	.	+	.	source_transcript=ENST00000426699.2;source_transcript_name=ENST00000426699;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426699.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426699.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000426699.2,ENST00000426699.2;transcript_id=HG002_chrY_T0000362;gene_id=HG002_chrY_G0000077;Parent=HG002_chrY_T0000362;transcript_name=HG002_chrY_T0000362;gene_name=ENSG00000229308;ID=exon:HG002_chrY_T0000362:0;Name=ENSG00000229308;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	3716096	3779361	.	+	.	source_transcript=ENST00000426699.2;source_transcript_name=ENST00000426699;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426699.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426699.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000426699.2,ENST00000426699.2;transcript_id=HG002_chrY_T0000362;gene_id=HG002_chrY_G0000077;Parent=HG002_chrY_T0000362;transcript_name=HG002_chrY_T0000362;gene_name=ENSG00000229308;ID=intron:HG002_chrY_T0000362:0;Name=ENSG00000229308;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	3779362	3779995	.	+	.	source_transcript=ENST00000426699.2;source_transcript_name=ENST00000426699;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426699.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426699.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000426699.2,ENST00000426699.2;transcript_id=HG002_chrY_T0000362;gene_id=HG002_chrY_G0000077;Parent=HG002_chrY_T0000362;transcript_name=HG002_chrY_T0000362;gene_name=ENSG00000229308;ID=exon:HG002_chrY_T0000362:1;Name=ENSG00000229308;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	3854355	3854460	.	-	.	source_gene_common_name=RNU6-303P;source_gene=ENSG00000252900.1;alternative_source_transcripts=ENST00000517091.1,ENST00000517091.1;gene_id=HG002_chrY_G0000078;gene_biotype=snRNA;gene_name=RNU6-303P;gene_sources=liftoff;ID=HG002_chrY_G0000078;Name=RNU6-303P
HG002_chrY	CAT	transcript	3854355	3854460	1000	-	.	source_transcript=ENST00000517091.1;source_transcript_name=RNU6-303P-201;source_gene=ENSG00000252900.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252900.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000517091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000517091.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-303P;alternative_source_transcripts=ENST00000517091.1,ENST00000517091.1;transcript_id=HG002_chrY_T0000363;gene_id=HG002_chrY_G0000078;Parent=HG002_chrY_G0000078;transcript_name=HG002_chrY_T0000363;gene_name=RNU6-303P;ID=HG002_chrY_T0000363;Name=RNU6-303P
HG002_chrY	CAT	exon	3854355	3854460	.	-	.	source_transcript=ENST00000517091.1;source_transcript_name=RNU6-303P-201;source_gene=ENSG00000252900.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252900.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000517091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000517091.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-303P;alternative_source_transcripts=ENST00000517091.1,ENST00000517091.1;transcript_id=HG002_chrY_T0000363;gene_id=HG002_chrY_G0000078;Parent=HG002_chrY_T0000363;transcript_name=HG002_chrY_T0000363;gene_name=RNU6-303P;ID=exon:HG002_chrY_T0000363:0;Name=RNU6-303P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	4481075	4482238	.	-	.	source_gene_common_name=SERBP1P2;source_gene=ENSG00000225878.1;alternative_source_transcripts=ENST00000436888.1,ENST00000436888.1;gene_id=HG002_chrY_G0000079;gene_biotype=processed_pseudogene;gene_name=SERBP1P2;gene_sources=liftoff;ID=HG002_chrY_G0000079;Name=SERBP1P2
HG002_chrY	CAT	transcript	4481075	4482238	1000	-	.	source_transcript=ENST00000436888.1;source_transcript_name=SERBP1P2-201;source_gene=ENSG00000225878.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225878.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436888.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SERBP1P2;alternative_source_transcripts=ENST00000436888.1,ENST00000436888.1;transcript_id=HG002_chrY_T0000364;gene_id=HG002_chrY_G0000079;Parent=HG002_chrY_G0000079;transcript_name=HG002_chrY_T0000364;gene_name=SERBP1P2;ID=HG002_chrY_T0000364;Name=SERBP1P2
HG002_chrY	CAT	exon	4481075	4482238	.	-	.	source_transcript=ENST00000436888.1;source_transcript_name=SERBP1P2-201;source_gene=ENSG00000225878.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225878.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436888.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SERBP1P2;alternative_source_transcripts=ENST00000436888.1,ENST00000436888.1;transcript_id=HG002_chrY_T0000364;gene_id=HG002_chrY_G0000079;Parent=HG002_chrY_T0000364;transcript_name=HG002_chrY_T0000364;gene_name=SERBP1P2;ID=exon:HG002_chrY_T0000364:0;Name=SERBP1P2;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	4672773	4679623	.	-	.	source_gene_common_name=ENSG00000277930;source_gene=ENSG00000277930.2;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;gene_id=HG002_chrY_G0000080;gene_biotype=lncRNA;gene_name=ENSG00000277930;gene_sources=liftoff;ID=HG002_chrY_G0000080;Name=ENSG00000277930
HG002_chrY	CAT	transcript	4672773	4679055	1000	-	.	source_transcript=ENST00000618284.2;source_transcript_name=ENST00000618284;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000618284.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618284.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;transcript_id=HG002_chrY_T0000365;gene_id=HG002_chrY_G0000080;Parent=HG002_chrY_G0000080;transcript_name=HG002_chrY_T0000365;gene_name=ENSG00000277930;ID=HG002_chrY_T0000365;Name=ENSG00000277930
HG002_chrY	CAT	exon	4672773	4673627	.	-	.	source_transcript=ENST00000618284.2;source_transcript_name=ENST00000618284;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000618284.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618284.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;transcript_id=HG002_chrY_T0000365;gene_id=HG002_chrY_G0000080;Parent=HG002_chrY_T0000365;transcript_name=HG002_chrY_T0000365;gene_name=ENSG00000277930;ID=exon:HG002_chrY_T0000365:0;Name=ENSG00000277930;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4673628	4676907	.	-	.	source_transcript=ENST00000618284.2;source_transcript_name=ENST00000618284;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000618284.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618284.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;transcript_id=HG002_chrY_T0000365;gene_id=HG002_chrY_G0000080;Parent=HG002_chrY_T0000365;transcript_name=HG002_chrY_T0000365;gene_name=ENSG00000277930;ID=intron:HG002_chrY_T0000365:0;Name=ENSG00000277930;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4676908	4677081	.	-	.	source_transcript=ENST00000618284.2;source_transcript_name=ENST00000618284;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000618284.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618284.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;transcript_id=HG002_chrY_T0000365;gene_id=HG002_chrY_G0000080;Parent=HG002_chrY_T0000365;transcript_name=HG002_chrY_T0000365;gene_name=ENSG00000277930;ID=exon:HG002_chrY_T0000365:1;Name=ENSG00000277930;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4677082	4678789	.	-	.	source_transcript=ENST00000618284.2;source_transcript_name=ENST00000618284;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000618284.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618284.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;transcript_id=HG002_chrY_T0000365;gene_id=HG002_chrY_G0000080;Parent=HG002_chrY_T0000365;transcript_name=HG002_chrY_T0000365;gene_name=ENSG00000277930;ID=intron:HG002_chrY_T0000365:1;Name=ENSG00000277930;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4678790	4679055	.	-	.	source_transcript=ENST00000618284.2;source_transcript_name=ENST00000618284;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000618284.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618284.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;transcript_id=HG002_chrY_T0000365;gene_id=HG002_chrY_G0000080;Parent=HG002_chrY_T0000365;transcript_name=HG002_chrY_T0000365;gene_name=ENSG00000277930;ID=exon:HG002_chrY_T0000365:2;Name=ENSG00000277930;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	4672773	4679623	1000	-	.	source_transcript=ENST00000794104.1;source_transcript_name=ENST00000794104;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794104.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794104.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000794104.1,ENST00000794104.1;transcript_id=HG002_chrY_T0000366;gene_id=HG002_chrY_G0000080;Parent=HG002_chrY_G0000080;transcript_name=HG002_chrY_T0000366;gene_name=ENSG00000277930;ID=HG002_chrY_T0000366;Name=ENSG00000277930
HG002_chrY	CAT	exon	4672773	4673627	.	-	.	source_transcript=ENST00000794104.1;source_transcript_name=ENST00000794104;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794104.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794104.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000794104.1,ENST00000794104.1;transcript_id=HG002_chrY_T0000366;gene_id=HG002_chrY_G0000080;Parent=HG002_chrY_T0000366;transcript_name=HG002_chrY_T0000366;gene_name=ENSG00000277930;ID=exon:HG002_chrY_T0000366:0;Name=ENSG00000277930;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4673628	4676907	.	-	.	source_transcript=ENST00000794104.1;source_transcript_name=ENST00000794104;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794104.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794104.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000794104.1,ENST00000794104.1;transcript_id=HG002_chrY_T0000366;gene_id=HG002_chrY_G0000080;Parent=HG002_chrY_T0000366;transcript_name=HG002_chrY_T0000366;gene_name=ENSG00000277930;ID=intron:HG002_chrY_T0000366:0;Name=ENSG00000277930;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4676908	4677081	.	-	.	source_transcript=ENST00000794104.1;source_transcript_name=ENST00000794104;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794104.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794104.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000794104.1,ENST00000794104.1;transcript_id=HG002_chrY_T0000366;gene_id=HG002_chrY_G0000080;Parent=HG002_chrY_T0000366;transcript_name=HG002_chrY_T0000366;gene_name=ENSG00000277930;ID=exon:HG002_chrY_T0000366:1;Name=ENSG00000277930;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4677082	4679426	.	-	.	source_transcript=ENST00000794104.1;source_transcript_name=ENST00000794104;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794104.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794104.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000794104.1,ENST00000794104.1;transcript_id=HG002_chrY_T0000366;gene_id=HG002_chrY_G0000080;Parent=HG002_chrY_T0000366;transcript_name=HG002_chrY_T0000366;gene_name=ENSG00000277930;ID=intron:HG002_chrY_T0000366:1;Name=ENSG00000277930;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4679427	4679623	.	-	.	source_transcript=ENST00000794104.1;source_transcript_name=ENST00000794104;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794104.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794104.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000794104.1,ENST00000794104.1;transcript_id=HG002_chrY_T0000366;gene_id=HG002_chrY_G0000080;Parent=HG002_chrY_T0000366;transcript_name=HG002_chrY_T0000366;gene_name=ENSG00000277930;ID=exon:HG002_chrY_T0000366:2;Name=ENSG00000277930;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	4673259	4677120	1000	-	.	source_transcript=ENST00000622595.1;source_transcript_name=ENST00000622595;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000622595.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622595.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000622595.1,ENST00000622595.1;transcript_id=HG002_chrY_T0000367;gene_id=HG002_chrY_G0000080;Parent=HG002_chrY_G0000080;transcript_name=HG002_chrY_T0000367;gene_name=ENSG00000277930;ID=HG002_chrY_T0000367;Name=ENSG00000277930
HG002_chrY	CAT	exon	4673259	4673627	.	-	.	source_transcript=ENST00000622595.1;source_transcript_name=ENST00000622595;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000622595.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622595.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000622595.1,ENST00000622595.1;transcript_id=HG002_chrY_T0000367;gene_id=HG002_chrY_G0000080;Parent=HG002_chrY_T0000367;transcript_name=HG002_chrY_T0000367;gene_name=ENSG00000277930;ID=exon:HG002_chrY_T0000367:0;Name=ENSG00000277930;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4673628	4676907	.	-	.	source_transcript=ENST00000622595.1;source_transcript_name=ENST00000622595;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000622595.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622595.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000622595.1,ENST00000622595.1;transcript_id=HG002_chrY_T0000367;gene_id=HG002_chrY_G0000080;Parent=HG002_chrY_T0000367;transcript_name=HG002_chrY_T0000367;gene_name=ENSG00000277930;ID=intron:HG002_chrY_T0000367:0;Name=ENSG00000277930;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4676908	4677120	.	-	.	source_transcript=ENST00000622595.1;source_transcript_name=ENST00000622595;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000622595.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622595.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000622595.1,ENST00000622595.1;transcript_id=HG002_chrY_T0000367;gene_id=HG002_chrY_G0000080;Parent=HG002_chrY_T0000367;transcript_name=HG002_chrY_T0000367;gene_name=ENSG00000277930;ID=exon:HG002_chrY_T0000367:1;Name=ENSG00000277930;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	4679631	5422123	.	+	.	source_gene_common_name=PCDH11Y;source_gene=ENSG00000099715.15;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;gene_id=HG002_chrY_G0000081;gene_biotype=protein_coding;gene_name=PCDH11Y;gene_sources=liftoff;ID=HG002_chrY_G0000081;Name=PCDH11Y
HG002_chrY	CAT	transcript	4679631	4784866	100	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG002_chrY_T0000368;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_G0000081;transcript_name=HG002_chrY_T0000368;gene_name=PCDH11Y;ID=HG002_chrY_T0000368;Name=PCDH11Y
HG002_chrY	CAT	exon	4679631	4680010	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG002_chrY_T0000368;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000368;transcript_name=HG002_chrY_T0000368;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000368:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4680011	4711322	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG002_chrY_T0000368;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000368;transcript_name=HG002_chrY_T0000368;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000368:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4711323	4711428	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG002_chrY_T0000368;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000368;transcript_name=HG002_chrY_T0000368;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000368:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4711429	4712086	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG002_chrY_T0000368;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000368;transcript_name=HG002_chrY_T0000368;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000368:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4712087	4712145	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG002_chrY_T0000368;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000368;transcript_name=HG002_chrY_T0000368;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000368:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	4712114	4712145	.	+	0	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG002_chrY_T0000368;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000368;transcript_name=HG002_chrY_T0000368;gene_name=PCDH11Y;ID=CDS:HG002_chrY_T0000368:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	4712114	4712116	.	+	0	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG002_chrY_T0000368;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000368;transcript_name=HG002_chrY_T0000368;gene_name=PCDH11Y;ID=start_codon:HG002_chrY_T0000368;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4712146	4736305	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG002_chrY_T0000368;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000368;transcript_name=HG002_chrY_T0000368;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000368:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4736306	4736876	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG002_chrY_T0000368;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000368;transcript_name=HG002_chrY_T0000368;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000368:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	4736306	4736876	.	+	1	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG002_chrY_T0000368;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000368;transcript_name=HG002_chrY_T0000368;gene_name=PCDH11Y;ID=CDS:HG002_chrY_T0000368:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4736877	4777636	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG002_chrY_T0000368;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000368;transcript_name=HG002_chrY_T0000368;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000368:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4777637	4780129	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG002_chrY_T0000368;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000368;transcript_name=HG002_chrY_T0000368;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000368:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	4777637	4780129	.	+	0	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG002_chrY_T0000368;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000368;transcript_name=HG002_chrY_T0000368;gene_name=PCDH11Y;ID=CDS:HG002_chrY_T0000368:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4780130	4783765	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG002_chrY_T0000368;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000368;transcript_name=HG002_chrY_T0000368;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000368:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4783766	4784866	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG002_chrY_T0000368;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000368;transcript_name=HG002_chrY_T0000368;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000368:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	4783766	4783783	.	+	0	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG002_chrY_T0000368;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000368;transcript_name=HG002_chrY_T0000368;gene_name=PCDH11Y;ID=CDS:HG002_chrY_T0000368:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	4783781	4783783	.	+	0	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG002_chrY_T0000368;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000368;transcript_name=HG002_chrY_T0000368;gene_name=PCDH11Y;ID=stop_codon:HG002_chrY_T0000368;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	4679701	4784881	100	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG002_chrY_T0000369;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_G0000081;transcript_name=HG002_chrY_T0000369;gene_name=PCDH11Y;ID=HG002_chrY_T0000369;Name=PCDH11Y
HG002_chrY	CAT	exon	4679701	4680010	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG002_chrY_T0000369;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000369;transcript_name=HG002_chrY_T0000369;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000369:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4680011	4710315	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG002_chrY_T0000369;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000369;transcript_name=HG002_chrY_T0000369;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000369:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4710316	4710484	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG002_chrY_T0000369;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000369;transcript_name=HG002_chrY_T0000369;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000369:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4710485	4711322	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG002_chrY_T0000369;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000369;transcript_name=HG002_chrY_T0000369;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000369:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4711323	4711428	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG002_chrY_T0000369;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000369;transcript_name=HG002_chrY_T0000369;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000369:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4711429	4712086	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG002_chrY_T0000369;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000369;transcript_name=HG002_chrY_T0000369;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000369:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4712087	4712145	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG002_chrY_T0000369;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000369;transcript_name=HG002_chrY_T0000369;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000369:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	4712114	4712145	.	+	0	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG002_chrY_T0000369;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000369;transcript_name=HG002_chrY_T0000369;gene_name=PCDH11Y;ID=CDS:HG002_chrY_T0000369:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	4712114	4712116	.	+	0	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG002_chrY_T0000369;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000369;transcript_name=HG002_chrY_T0000369;gene_name=PCDH11Y;ID=start_codon:HG002_chrY_T0000369;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4712146	4736305	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG002_chrY_T0000369;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000369;transcript_name=HG002_chrY_T0000369;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000369:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4736306	4736876	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG002_chrY_T0000369;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000369;transcript_name=HG002_chrY_T0000369;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000369:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	4736306	4736876	.	+	1	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG002_chrY_T0000369;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000369;transcript_name=HG002_chrY_T0000369;gene_name=PCDH11Y;ID=CDS:HG002_chrY_T0000369:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4736877	4777636	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG002_chrY_T0000369;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000369;transcript_name=HG002_chrY_T0000369;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000369:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4777637	4780129	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG002_chrY_T0000369;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000369;transcript_name=HG002_chrY_T0000369;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000369:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	4777637	4780129	.	+	0	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG002_chrY_T0000369;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000369;transcript_name=HG002_chrY_T0000369;gene_name=PCDH11Y;ID=CDS:HG002_chrY_T0000369:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4780130	4783765	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG002_chrY_T0000369;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000369;transcript_name=HG002_chrY_T0000369;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000369:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4783766	4784881	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG002_chrY_T0000369;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000369;transcript_name=HG002_chrY_T0000369;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000369:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	4783766	4783783	.	+	0	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG002_chrY_T0000369;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000369;transcript_name=HG002_chrY_T0000369;gene_name=PCDH11Y;ID=CDS:HG002_chrY_T0000369:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	4783781	4783783	.	+	0	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG002_chrY_T0000369;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000369;transcript_name=HG002_chrY_T0000369;gene_name=PCDH11Y;ID=stop_codon:HG002_chrY_T0000369;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	4679701	5422123	100	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG002_chrY_T0000370;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_G0000081;transcript_name=HG002_chrY_T0000370;gene_name=PCDH11Y;ID=HG002_chrY_T0000370;Name=PCDH11Y
HG002_chrY	CAT	exon	4679701	4680010	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG002_chrY_T0000370;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000370;transcript_name=HG002_chrY_T0000370;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000370:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4680011	4736305	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG002_chrY_T0000370;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000370;transcript_name=HG002_chrY_T0000370;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000370:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4736306	4736876	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG002_chrY_T0000370;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000370;transcript_name=HG002_chrY_T0000370;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000370:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	4736517	4736876	.	+	0	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG002_chrY_T0000370;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000370;transcript_name=HG002_chrY_T0000370;gene_name=PCDH11Y;ID=CDS:HG002_chrY_T0000370:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	4736517	4736519	.	+	0	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG002_chrY_T0000370;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000370;transcript_name=HG002_chrY_T0000370;gene_name=PCDH11Y;ID=start_codon:HG002_chrY_T0000370;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4736877	4777636	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG002_chrY_T0000370;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000370;transcript_name=HG002_chrY_T0000370;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000370:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4777637	4780129	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG002_chrY_T0000370;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000370;transcript_name=HG002_chrY_T0000370;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000370:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	4777637	4780129	.	+	0	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG002_chrY_T0000370;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000370;transcript_name=HG002_chrY_T0000370;gene_name=PCDH11Y;ID=CDS:HG002_chrY_T0000370:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4780130	5180499	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG002_chrY_T0000370;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000370;transcript_name=HG002_chrY_T0000370;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000370:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5180500	5180698	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG002_chrY_T0000370;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000370;transcript_name=HG002_chrY_T0000370;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000370:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	5180500	5180698	.	+	0	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG002_chrY_T0000370;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000370;transcript_name=HG002_chrY_T0000370;gene_name=PCDH11Y;ID=CDS:HG002_chrY_T0000370:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5180699	5261659	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG002_chrY_T0000370;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000370;transcript_name=HG002_chrY_T0000370;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000370:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5261660	5261683	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG002_chrY_T0000370;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000370;transcript_name=HG002_chrY_T0000370;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000370:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	5261660	5261683	.	+	2	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG002_chrY_T0000370;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000370;transcript_name=HG002_chrY_T0000370;gene_name=PCDH11Y;ID=CDS:HG002_chrY_T0000370:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5261684	5417170	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG002_chrY_T0000370;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000370;transcript_name=HG002_chrY_T0000370;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000370:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5417171	5422123	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG002_chrY_T0000370;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000370;transcript_name=HG002_chrY_T0000370;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000370:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	5417171	5417841	.	+	2	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG002_chrY_T0000370;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000370;transcript_name=HG002_chrY_T0000370;gene_name=PCDH11Y;ID=CDS:HG002_chrY_T0000370:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	5417839	5417841	.	+	0	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG002_chrY_T0000370;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000370;transcript_name=HG002_chrY_T0000370;gene_name=PCDH11Y;ID=stop_codon:HG002_chrY_T0000370;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	4679701	4779687	100	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG002_chrY_T0000371;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_G0000081;transcript_name=HG002_chrY_T0000371;gene_name=PCDH11Y;ID=HG002_chrY_T0000371;Name=PCDH11Y
HG002_chrY	CAT	exon	4679701	4680010	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG002_chrY_T0000371;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000371;transcript_name=HG002_chrY_T0000371;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000371:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4680011	4710315	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG002_chrY_T0000371;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000371;transcript_name=HG002_chrY_T0000371;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000371:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4710316	4710484	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG002_chrY_T0000371;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000371;transcript_name=HG002_chrY_T0000371;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000371:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4710485	4710631	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG002_chrY_T0000371;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000371;transcript_name=HG002_chrY_T0000371;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000371:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4710632	4710763	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG002_chrY_T0000371;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000371;transcript_name=HG002_chrY_T0000371;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000371:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4710764	4711322	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG002_chrY_T0000371;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000371;transcript_name=HG002_chrY_T0000371;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000371:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4711323	4711428	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG002_chrY_T0000371;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000371;transcript_name=HG002_chrY_T0000371;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000371:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4711429	4712086	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG002_chrY_T0000371;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000371;transcript_name=HG002_chrY_T0000371;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000371:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4712087	4712145	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG002_chrY_T0000371;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000371;transcript_name=HG002_chrY_T0000371;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000371:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	4712114	4712145	.	+	0	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG002_chrY_T0000371;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000371;transcript_name=HG002_chrY_T0000371;gene_name=PCDH11Y;ID=CDS:HG002_chrY_T0000371:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	4712114	4712116	.	+	0	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG002_chrY_T0000371;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000371;transcript_name=HG002_chrY_T0000371;gene_name=PCDH11Y;ID=start_codon:HG002_chrY_T0000371;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4712146	4736305	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG002_chrY_T0000371;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000371;transcript_name=HG002_chrY_T0000371;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000371:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4736306	4736876	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG002_chrY_T0000371;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000371;transcript_name=HG002_chrY_T0000371;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000371:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	4736306	4736876	.	+	1	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG002_chrY_T0000371;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000371;transcript_name=HG002_chrY_T0000371;gene_name=PCDH11Y;ID=CDS:HG002_chrY_T0000371:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4736877	4777636	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG002_chrY_T0000371;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000371;transcript_name=HG002_chrY_T0000371;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000371:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4777637	4779687	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG002_chrY_T0000371;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000371;transcript_name=HG002_chrY_T0000371;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000371:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	4777637	4779687	.	+	0	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG002_chrY_T0000371;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000371;transcript_name=HG002_chrY_T0000371;gene_name=PCDH11Y;ID=CDS:HG002_chrY_T0000371:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	4679795	4711364	1000	+	.	source_transcript=ENST00000620615.4;source_transcript_name=PCDH11Y-205;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000620615.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000620615.4;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000620615.4,ENST00000620615.4;transcript_id=HG002_chrY_T0000372;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_G0000081;transcript_name=HG002_chrY_T0000372;gene_name=PCDH11Y;ID=HG002_chrY_T0000372;Name=PCDH11Y
HG002_chrY	CAT	exon	4679795	4680010	.	+	.	source_transcript=ENST00000620615.4;source_transcript_name=PCDH11Y-205;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000620615.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000620615.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000620615.4,ENST00000620615.4;transcript_id=HG002_chrY_T0000372;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000372;transcript_name=HG002_chrY_T0000372;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000372:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4680011	4682092	.	+	.	source_transcript=ENST00000620615.4;source_transcript_name=PCDH11Y-205;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000620615.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000620615.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000620615.4,ENST00000620615.4;transcript_id=HG002_chrY_T0000372;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000372;transcript_name=HG002_chrY_T0000372;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000372:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4682093	4682163	.	+	.	source_transcript=ENST00000620615.4;source_transcript_name=PCDH11Y-205;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000620615.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000620615.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000620615.4,ENST00000620615.4;transcript_id=HG002_chrY_T0000372;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000372;transcript_name=HG002_chrY_T0000372;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000372:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4682164	4711322	.	+	.	source_transcript=ENST00000620615.4;source_transcript_name=PCDH11Y-205;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000620615.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000620615.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000620615.4,ENST00000620615.4;transcript_id=HG002_chrY_T0000372;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000372;transcript_name=HG002_chrY_T0000372;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000372:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4711323	4711364	.	+	.	source_transcript=ENST00000620615.4;source_transcript_name=PCDH11Y-205;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000620615.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000620615.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000620615.4,ENST00000620615.4;transcript_id=HG002_chrY_T0000372;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000372;transcript_name=HG002_chrY_T0000372;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000372:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	4679805	4736505	100	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG002_chrY_T0000373;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_G0000081;transcript_name=HG002_chrY_T0000373;gene_name=PCDH11Y;ID=HG002_chrY_T0000373;Name=PCDH11Y
HG002_chrY	CAT	exon	4679805	4680010	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG002_chrY_T0000373;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000373;transcript_name=HG002_chrY_T0000373;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000373:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4680011	4682092	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG002_chrY_T0000373;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000373;transcript_name=HG002_chrY_T0000373;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000373:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4682093	4682163	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG002_chrY_T0000373;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000373;transcript_name=HG002_chrY_T0000373;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000373:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4682164	4712086	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG002_chrY_T0000373;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000373;transcript_name=HG002_chrY_T0000373;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000373:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4712087	4712145	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG002_chrY_T0000373;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000373;transcript_name=HG002_chrY_T0000373;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000373:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	4712114	4712145	.	+	0	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG002_chrY_T0000373;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000373;transcript_name=HG002_chrY_T0000373;gene_name=PCDH11Y;ID=CDS:HG002_chrY_T0000373:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	4712114	4712116	.	+	0	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG002_chrY_T0000373;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000373;transcript_name=HG002_chrY_T0000373;gene_name=PCDH11Y;ID=start_codon:HG002_chrY_T0000373;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4712146	4736305	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG002_chrY_T0000373;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000373;transcript_name=HG002_chrY_T0000373;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000373:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4736306	4736505	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG002_chrY_T0000373;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000373;transcript_name=HG002_chrY_T0000373;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000373:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	4736306	4736505	.	+	1	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG002_chrY_T0000373;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000373;transcript_name=HG002_chrY_T0000373;gene_name=PCDH11Y;ID=CDS:HG002_chrY_T0000373:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	4735505	4780859	100	+	.	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=HG002_chrY_T0000375;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_G0000081;transcript_name=HG002_chrY_T0000375;gene_name=PCDH11Y;ID=HG002_chrY_T0000375;Name=PCDH11Y
HG002_chrY	CAT	exon	4735505	4736876	.	+	.	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=HG002_chrY_T0000375;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000375;transcript_name=HG002_chrY_T0000375;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000375:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	4736241	4736876	.	+	0	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=HG002_chrY_T0000375;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000375;transcript_name=HG002_chrY_T0000375;gene_name=PCDH11Y;ID=CDS:HG002_chrY_T0000375:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	4736241	4736243	.	+	0	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=HG002_chrY_T0000375;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000375;transcript_name=HG002_chrY_T0000375;gene_name=PCDH11Y;ID=start_codon:HG002_chrY_T0000375;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4736877	4777636	.	+	.	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=HG002_chrY_T0000375;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000375;transcript_name=HG002_chrY_T0000375;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000375:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4777637	4780859	.	+	.	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=HG002_chrY_T0000375;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000375;transcript_name=HG002_chrY_T0000375;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000375:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	4777637	4780162	.	+	0	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=HG002_chrY_T0000375;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000375;transcript_name=HG002_chrY_T0000375;gene_name=PCDH11Y;ID=CDS:HG002_chrY_T0000375:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	4780160	4780162	.	+	0	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=HG002_chrY_T0000375;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000375;transcript_name=HG002_chrY_T0000375;gene_name=PCDH11Y;ID=stop_codon:HG002_chrY_T0000375;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	4735507	4784122	100	+	.	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG002_chrY_T0000376;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_G0000081;transcript_name=HG002_chrY_T0000376;gene_name=PCDH11Y;ID=HG002_chrY_T0000376;Name=PCDH11Y
HG002_chrY	CAT	exon	4735507	4736876	.	+	.	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG002_chrY_T0000376;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000376;transcript_name=HG002_chrY_T0000376;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000376:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	4736241	4736876	.	+	0	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG002_chrY_T0000376;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000376;transcript_name=HG002_chrY_T0000376;gene_name=PCDH11Y;ID=CDS:HG002_chrY_T0000376:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	4736241	4736243	.	+	0	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG002_chrY_T0000376;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000376;transcript_name=HG002_chrY_T0000376;gene_name=PCDH11Y;ID=start_codon:HG002_chrY_T0000376;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4736877	4777636	.	+	.	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG002_chrY_T0000376;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000376;transcript_name=HG002_chrY_T0000376;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000376:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4777637	4780129	.	+	.	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG002_chrY_T0000376;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000376;transcript_name=HG002_chrY_T0000376;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000376:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	4777637	4780129	.	+	0	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG002_chrY_T0000376;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000376;transcript_name=HG002_chrY_T0000376;gene_name=PCDH11Y;ID=CDS:HG002_chrY_T0000376:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4780130	4783765	.	+	.	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG002_chrY_T0000376;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000376;transcript_name=HG002_chrY_T0000376;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000376:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4783766	4784122	.	+	.	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG002_chrY_T0000376;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000376;transcript_name=HG002_chrY_T0000376;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000376:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	4783766	4783783	.	+	0	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG002_chrY_T0000376;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000376;transcript_name=HG002_chrY_T0000376;gene_name=PCDH11Y;ID=CDS:HG002_chrY_T0000376:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	4783781	4783783	.	+	0	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG002_chrY_T0000376;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000376;transcript_name=HG002_chrY_T0000376;gene_name=PCDH11Y;ID=stop_codon:HG002_chrY_T0000376;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	4735507	5422123	100	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG002_chrY_T0000377;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_G0000081;transcript_name=HG002_chrY_T0000377;gene_name=PCDH11Y;ID=HG002_chrY_T0000377;Name=PCDH11Y
HG002_chrY	CAT	exon	4735507	4736876	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG002_chrY_T0000377;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000377;transcript_name=HG002_chrY_T0000377;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000377:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	4736241	4736876	.	+	0	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG002_chrY_T0000377;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000377;transcript_name=HG002_chrY_T0000377;gene_name=PCDH11Y;ID=CDS:HG002_chrY_T0000377:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	4736241	4736243	.	+	0	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG002_chrY_T0000377;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000377;transcript_name=HG002_chrY_T0000377;gene_name=PCDH11Y;ID=start_codon:HG002_chrY_T0000377;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4736877	4777636	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG002_chrY_T0000377;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000377;transcript_name=HG002_chrY_T0000377;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000377:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	4777637	4780129	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG002_chrY_T0000377;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000377;transcript_name=HG002_chrY_T0000377;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000377:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	4777637	4780129	.	+	0	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG002_chrY_T0000377;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000377;transcript_name=HG002_chrY_T0000377;gene_name=PCDH11Y;ID=CDS:HG002_chrY_T0000377:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	4780130	5180499	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG002_chrY_T0000377;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000377;transcript_name=HG002_chrY_T0000377;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000377:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5180500	5180698	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG002_chrY_T0000377;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000377;transcript_name=HG002_chrY_T0000377;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000377:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	5180500	5180698	.	+	0	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG002_chrY_T0000377;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000377;transcript_name=HG002_chrY_T0000377;gene_name=PCDH11Y;ID=CDS:HG002_chrY_T0000377:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5180699	5261659	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG002_chrY_T0000377;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000377;transcript_name=HG002_chrY_T0000377;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000377:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5261660	5261683	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG002_chrY_T0000377;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000377;transcript_name=HG002_chrY_T0000377;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000377:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	5261660	5261683	.	+	2	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG002_chrY_T0000377;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000377;transcript_name=HG002_chrY_T0000377;gene_name=PCDH11Y;ID=CDS:HG002_chrY_T0000377:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5261684	5417170	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG002_chrY_T0000377;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000377;transcript_name=HG002_chrY_T0000377;gene_name=PCDH11Y;ID=intron:HG002_chrY_T0000377:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5417171	5422123	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG002_chrY_T0000377;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000377;transcript_name=HG002_chrY_T0000377;gene_name=PCDH11Y;ID=exon:HG002_chrY_T0000377:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	5417171	5417841	.	+	2	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG002_chrY_T0000377;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000377;transcript_name=HG002_chrY_T0000377;gene_name=PCDH11Y;ID=CDS:HG002_chrY_T0000377:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	5417839	5417841	.	+	0	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG002_chrY_T0000377;gene_id=HG002_chrY_G0000081;Parent=HG002_chrY_T0000377;transcript_name=HG002_chrY_T0000377;gene_name=PCDH11Y;ID=stop_codon:HG002_chrY_T0000377;Name=PCDH11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	4698480	4698670	.	+	.	source_gene_common_name=RNU2-57P;source_gene=ENSG00000252468.1;alternative_source_transcripts=ENST00000516659.1,ENST00000516659.1;gene_id=HG002_chrY_G0000082;gene_biotype=snRNA;gene_name=RNU2-57P;gene_sources=liftoff;ID=HG002_chrY_G0000082;Name=RNU2-57P
HG002_chrY	CAT	transcript	4698480	4698670	1000	+	.	source_transcript=ENST00000516659.1;source_transcript_name=RNU2-57P-201;source_gene=ENSG00000252468.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252468.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516659.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU2-57P;alternative_source_transcripts=ENST00000516659.1,ENST00000516659.1;transcript_id=HG002_chrY_T0000374;gene_id=HG002_chrY_G0000082;Parent=HG002_chrY_G0000082;transcript_name=HG002_chrY_T0000374;gene_name=RNU2-57P;ID=HG002_chrY_T0000374;Name=RNU2-57P
HG002_chrY	CAT	exon	4698480	4698670	.	+	.	source_transcript=ENST00000516659.1;source_transcript_name=RNU2-57P-201;source_gene=ENSG00000252468.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252468.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516659.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU2-57P;alternative_source_transcripts=ENST00000516659.1,ENST00000516659.1;transcript_id=HG002_chrY_T0000374;gene_id=HG002_chrY_G0000082;Parent=HG002_chrY_T0000374;transcript_name=HG002_chrY_T0000374;gene_name=RNU2-57P;ID=exon:HG002_chrY_T0000374:0;Name=RNU2-57P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	4886645	4887499	.	-	.	source_gene_common_name=VDAC1P6;source_gene=ENSG00000231341.1;alternative_source_transcripts=ENST00000430062.1,ENST00000430062.1;gene_id=HG002_chrY_G0000083;gene_biotype=processed_pseudogene;gene_name=VDAC1P6;gene_sources=liftoff;ID=HG002_chrY_G0000083;Name=VDAC1P6
HG002_chrY	CAT	transcript	4886645	4887499	1000	-	.	source_transcript=ENST00000430062.1;source_transcript_name=VDAC1P6-201;source_gene=ENSG00000231341.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000231341.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430062.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VDAC1P6;alternative_source_transcripts=ENST00000430062.1,ENST00000430062.1;transcript_id=HG002_chrY_T0000378;gene_id=HG002_chrY_G0000083;Parent=HG002_chrY_G0000083;transcript_name=HG002_chrY_T0000378;gene_name=VDAC1P6;ID=HG002_chrY_T0000378;Name=VDAC1P6
HG002_chrY	CAT	exon	4886645	4887499	.	-	.	source_transcript=ENST00000430062.1;source_transcript_name=VDAC1P6-201;source_gene=ENSG00000231341.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000231341.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430062.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VDAC1P6;alternative_source_transcripts=ENST00000430062.1,ENST00000430062.1;transcript_id=HG002_chrY_T0000378;gene_id=HG002_chrY_G0000083;Parent=HG002_chrY_T0000378;transcript_name=HG002_chrY_T0000378;gene_name=VDAC1P6;ID=exon:HG002_chrY_T0000378:0;Name=VDAC1P6;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	5017182	5018401	.	-	.	source_gene_common_name=EIF4A1P2;source_gene=ENSG00000235001.3;alternative_source_transcripts=ENST00000422633.1,ENST00000422633.1;gene_id=HG002_chrY_G0000084;gene_biotype=processed_pseudogene;gene_name=EIF4A1P2;gene_sources=liftoff;ID=HG002_chrY_G0000084;Name=EIF4A1P2
HG002_chrY	CAT	transcript	5017182	5018401	1000	-	.	source_transcript=ENST00000422633.1;source_transcript_name=EIF4A1P2-201;source_gene=ENSG00000235001.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000235001.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422633.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422633.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF4A1P2;alternative_source_transcripts=ENST00000422633.1,ENST00000422633.1;transcript_id=HG002_chrY_T0000379;gene_id=HG002_chrY_G0000084;Parent=HG002_chrY_G0000084;transcript_name=HG002_chrY_T0000379;gene_name=EIF4A1P2;ID=HG002_chrY_T0000379;Name=EIF4A1P2
HG002_chrY	CAT	exon	5017182	5018401	.	-	.	source_transcript=ENST00000422633.1;source_transcript_name=EIF4A1P2-201;source_gene=ENSG00000235001.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000235001.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422633.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422633.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF4A1P2;alternative_source_transcripts=ENST00000422633.1,ENST00000422633.1;transcript_id=HG002_chrY_T0000379;gene_id=HG002_chrY_G0000084;Parent=HG002_chrY_T0000379;transcript_name=HG002_chrY_T0000379;gene_name=EIF4A1P2;ID=exon:HG002_chrY_T0000379:0;Name=EIF4A1P2;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	5253030	5254316	.	+	.	source_gene_common_name=KRT18P10;source_gene=ENSG00000214207.2;alternative_source_transcripts=ENST00000388836.3,ENST00000388836.3;gene_id=HG002_chrY_G0000085;gene_biotype=processed_pseudogene;gene_name=KRT18P10;gene_sources=liftoff;ID=HG002_chrY_G0000085;Name=KRT18P10
HG002_chrY	CAT	transcript	5253030	5254316	1000	+	.	source_transcript=ENST00000388836.3;source_transcript_name=KRT18P10-201;source_gene=ENSG00000214207.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000214207.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000388836.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000388836.3;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KRT18P10;alternative_source_transcripts=ENST00000388836.3,ENST00000388836.3;transcript_id=HG002_chrY_T0000380;gene_id=HG002_chrY_G0000085;Parent=HG002_chrY_G0000085;transcript_name=HG002_chrY_T0000380;gene_name=KRT18P10;ID=HG002_chrY_T0000380;Name=KRT18P10
HG002_chrY	CAT	exon	5253030	5254316	.	+	.	source_transcript=ENST00000388836.3;source_transcript_name=KRT18P10-201;source_gene=ENSG00000214207.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000214207.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000388836.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000388836.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KRT18P10;alternative_source_transcripts=ENST00000388836.3,ENST00000388836.3;transcript_id=HG002_chrY_T0000380;gene_id=HG002_chrY_G0000085;Parent=HG002_chrY_T0000380;transcript_name=HG002_chrY_T0000380;gene_name=KRT18P10;ID=exon:HG002_chrY_T0000380:0;Name=KRT18P10;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	5314373	5314548	.	-	.	source_gene_common_name=SNX3P1Y;source_gene=ENSG00000278585.1;alternative_source_transcripts=ENST00000615757.1,ENST00000615757.1;gene_id=HG002_chrY_G0000086;gene_biotype=processed_pseudogene;gene_name=SNX3P1Y;gene_sources=liftoff;ID=HG002_chrY_G0000086;Name=SNX3P1Y
HG002_chrY	CAT	transcript	5314373	5314548	1000	-	.	source_transcript=ENST00000615757.1;source_transcript_name=SNX3P1Y-201;source_gene=ENSG00000278585.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278585.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000615757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615757.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNX3P1Y;alternative_source_transcripts=ENST00000615757.1,ENST00000615757.1;transcript_id=HG002_chrY_T0000381;gene_id=HG002_chrY_G0000086;Parent=HG002_chrY_G0000086;transcript_name=HG002_chrY_T0000381;gene_name=SNX3P1Y;ID=HG002_chrY_T0000381;Name=SNX3P1Y
HG002_chrY	CAT	exon	5314373	5314548	.	-	.	source_transcript=ENST00000615757.1;source_transcript_name=SNX3P1Y-201;source_gene=ENSG00000278585.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278585.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000615757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615757.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNX3P1Y;alternative_source_transcripts=ENST00000615757.1,ENST00000615757.1;transcript_id=HG002_chrY_T0000381;gene_id=HG002_chrY_G0000086;Parent=HG002_chrY_T0000381;transcript_name=HG002_chrY_T0000381;gene_name=SNX3P1Y;ID=exon:HG002_chrY_T0000381:0;Name=SNX3P1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	5473197	5473634	.	-	.	source_gene_common_name=RPL26P37;source_gene=ENSG00000235175.1;alternative_source_transcripts=ENST00000411983.1,ENST00000411983.1;gene_id=HG002_chrY_G0000087;gene_biotype=processed_pseudogene;gene_name=RPL26P37;gene_sources=liftoff;ID=HG002_chrY_G0000087;Name=RPL26P37
HG002_chrY	CAT	transcript	5473197	5473634	1000	-	.	source_transcript=ENST00000411983.1;source_transcript_name=RPL26P37-201;source_gene=ENSG00000235175.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000235175.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000411983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411983.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL26P37;alternative_source_transcripts=ENST00000411983.1,ENST00000411983.1;transcript_id=HG002_chrY_T0000382;gene_id=HG002_chrY_G0000087;Parent=HG002_chrY_G0000087;transcript_name=HG002_chrY_T0000382;gene_name=RPL26P37;ID=HG002_chrY_T0000382;Name=RPL26P37
HG002_chrY	CAT	exon	5473197	5473634	.	-	.	source_transcript=ENST00000411983.1;source_transcript_name=RPL26P37-201;source_gene=ENSG00000235175.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000235175.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000411983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411983.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL26P37;alternative_source_transcripts=ENST00000411983.1,ENST00000411983.1;transcript_id=HG002_chrY_T0000382;gene_id=HG002_chrY_G0000087;Parent=HG002_chrY_T0000382;transcript_name=HG002_chrY_T0000382;gene_name=RPL26P37;ID=exon:HG002_chrY_T0000382:0;Name=RPL26P37;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	5567398	5568634	.	+	.	source_gene_common_name=TUSC2P1;source_gene=ENSG00000285470.1;alternative_source_transcripts=ENST00000645906.1,ENST00000645906.1;gene_id=HG002_chrY_G0000088;gene_biotype=processed_pseudogene;gene_name=TUSC2P1;gene_sources=liftoff;ID=HG002_chrY_G0000088;Name=TUSC2P1
HG002_chrY	CAT	transcript	5567398	5568634	1000	+	.	source_transcript=ENST00000645906.1;source_transcript_name=TUSC2P1-201;source_gene=ENSG00000285470.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000285470.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000645906.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645906.1;transcript_score=199.83800000000002;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUSC2P1;alternative_source_transcripts=ENST00000645906.1,ENST00000645906.1;transcript_id=HG002_chrY_T0000383;gene_id=HG002_chrY_G0000088;Parent=HG002_chrY_G0000088;transcript_name=HG002_chrY_T0000383;gene_name=TUSC2P1;ID=HG002_chrY_T0000383;Name=TUSC2P1
HG002_chrY	CAT	exon	5567398	5568634	.	+	.	source_transcript=ENST00000645906.1;source_transcript_name=TUSC2P1-201;source_gene=ENSG00000285470.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000285470.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000645906.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645906.1;transcript_score=199.83800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUSC2P1;alternative_source_transcripts=ENST00000645906.1,ENST00000645906.1;transcript_id=HG002_chrY_T0000383;gene_id=HG002_chrY_G0000088;Parent=HG002_chrY_T0000383;transcript_name=HG002_chrY_T0000383;gene_name=TUSC2P1;ID=exon:HG002_chrY_T0000383:0;Name=TUSC2P1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	5838656	5839119	.	+	.	source_gene_common_name=DLGAP5P1;source_gene=ENSG00000237195.1;alternative_source_transcripts=ENST00000430307.1,ENST00000430307.1;gene_id=HG002_chrY_G0000089;gene_biotype=processed_pseudogene;gene_name=DLGAP5P1;gene_sources=liftoff;ID=HG002_chrY_G0000089;Name=DLGAP5P1
HG002_chrY	CAT	transcript	5838656	5839119	1000	+	.	source_transcript=ENST00000430307.1;source_transcript_name=DLGAP5P1-201;source_gene=ENSG00000237195.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237195.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430307.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DLGAP5P1;alternative_source_transcripts=ENST00000430307.1,ENST00000430307.1;transcript_id=HG002_chrY_T0000384;gene_id=HG002_chrY_G0000089;Parent=HG002_chrY_G0000089;transcript_name=HG002_chrY_T0000384;gene_name=DLGAP5P1;ID=HG002_chrY_T0000384;Name=DLGAP5P1
HG002_chrY	CAT	exon	5838656	5839119	.	+	.	source_transcript=ENST00000430307.1;source_transcript_name=DLGAP5P1-201;source_gene=ENSG00000237195.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237195.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430307.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DLGAP5P1;alternative_source_transcripts=ENST00000430307.1,ENST00000430307.1;transcript_id=HG002_chrY_T0000384;gene_id=HG002_chrY_G0000089;Parent=HG002_chrY_T0000384;transcript_name=HG002_chrY_T0000384;gene_name=DLGAP5P1;ID=exon:HG002_chrY_T0000384:0;Name=DLGAP5P1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	5921124	5925945	.	-	.	source_gene_common_name=TTTY23;source_gene=ENSG00000239225.2;gene_id=HG002_chrY_G0000090;gene_biotype=lncRNA;gene_name=TTTY23;gene_sources=liftoff;ID=HG002_chrY_G0000090;Name=TTTY23
HG002_chrY	CAT	transcript	5921124	5925945	1000	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000385;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_G0000090;transcript_name=HG002_chrY_T0000385;gene_name=TTTY23;ID=HG002_chrY_T0000385;Name=TTTY23
HG002_chrY	CAT	exon	5921124	5921719	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000385;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000385;transcript_name=HG002_chrY_T0000385;gene_name=TTTY23;ID=exon:HG002_chrY_T0000385:0;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5921720	5922271	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000385;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000385;transcript_name=HG002_chrY_T0000385;gene_name=TTTY23;ID=intron:HG002_chrY_T0000385:0;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5922272	5922379	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000385;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000385;transcript_name=HG002_chrY_T0000385;gene_name=TTTY23;ID=exon:HG002_chrY_T0000385:1;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5922380	5922559	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000385;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000385;transcript_name=HG002_chrY_T0000385;gene_name=TTTY23;ID=intron:HG002_chrY_T0000385:1;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5922560	5922612	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000385;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000385;transcript_name=HG002_chrY_T0000385;gene_name=TTTY23;ID=exon:HG002_chrY_T0000385:2;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5922613	5923152	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000385;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000385;transcript_name=HG002_chrY_T0000385;gene_name=TTTY23;ID=intron:HG002_chrY_T0000385:2;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5923153	5923298	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000385;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000385;transcript_name=HG002_chrY_T0000385;gene_name=TTTY23;ID=exon:HG002_chrY_T0000385:3;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5923299	5923411	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000385;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000385;transcript_name=HG002_chrY_T0000385;gene_name=TTTY23;ID=intron:HG002_chrY_T0000385:3;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5923412	5923501	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000385;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000385;transcript_name=HG002_chrY_T0000385;gene_name=TTTY23;ID=exon:HG002_chrY_T0000385:4;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5923502	5923696	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000385;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000385;transcript_name=HG002_chrY_T0000385;gene_name=TTTY23;ID=intron:HG002_chrY_T0000385:4;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5923697	5923819	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000385;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000385;transcript_name=HG002_chrY_T0000385;gene_name=TTTY23;ID=exon:HG002_chrY_T0000385:5;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5923820	5925763	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000385;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000385;transcript_name=HG002_chrY_T0000385;gene_name=TTTY23;ID=intron:HG002_chrY_T0000385:5;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5925764	5925945	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000385;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000385;transcript_name=HG002_chrY_T0000385;gene_name=TTTY23;ID=exon:HG002_chrY_T0000385:6;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	5921301	5925927	1000	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000386;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_G0000090;transcript_name=HG002_chrY_T0000386;gene_name=TTTY23;ID=HG002_chrY_T0000386;Name=TTTY23
HG002_chrY	CAT	exon	5921301	5921719	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000386;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000386;transcript_name=HG002_chrY_T0000386;gene_name=TTTY23;ID=exon:HG002_chrY_T0000386:0;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5921720	5922271	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000386;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000386;transcript_name=HG002_chrY_T0000386;gene_name=TTTY23;ID=intron:HG002_chrY_T0000386:0;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5922272	5922379	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000386;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000386;transcript_name=HG002_chrY_T0000386;gene_name=TTTY23;ID=exon:HG002_chrY_T0000386:1;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5922380	5923152	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000386;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000386;transcript_name=HG002_chrY_T0000386;gene_name=TTTY23;ID=intron:HG002_chrY_T0000386:1;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5923153	5923298	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000386;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000386;transcript_name=HG002_chrY_T0000386;gene_name=TTTY23;ID=exon:HG002_chrY_T0000386:2;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5923299	5923411	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000386;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000386;transcript_name=HG002_chrY_T0000386;gene_name=TTTY23;ID=intron:HG002_chrY_T0000386:2;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5923412	5923501	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000386;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000386;transcript_name=HG002_chrY_T0000386;gene_name=TTTY23;ID=exon:HG002_chrY_T0000386:3;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5923502	5923696	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000386;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000386;transcript_name=HG002_chrY_T0000386;gene_name=TTTY23;ID=intron:HG002_chrY_T0000386:3;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5923697	5923819	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000386;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000386;transcript_name=HG002_chrY_T0000386;gene_name=TTTY23;ID=exon:HG002_chrY_T0000386:4;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5923820	5925763	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000386;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000386;transcript_name=HG002_chrY_T0000386;gene_name=TTTY23;ID=intron:HG002_chrY_T0000386:4;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5925764	5925927	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000386;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000386;transcript_name=HG002_chrY_T0000386;gene_name=TTTY23;ID=exon:HG002_chrY_T0000386:5;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	5921301	5925927	1000	-	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000387;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_G0000090;transcript_name=HG002_chrY_T0000387;gene_name=TTTY23;ID=HG002_chrY_T0000387;Name=TTTY23
HG002_chrY	CAT	exon	5921301	5921719	.	-	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000387;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000387;transcript_name=HG002_chrY_T0000387;gene_name=TTTY23;ID=exon:HG002_chrY_T0000387:0;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5921720	5922271	.	-	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000387;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000387;transcript_name=HG002_chrY_T0000387;gene_name=TTTY23;ID=intron:HG002_chrY_T0000387:0;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5922272	5922379	.	-	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000387;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000387;transcript_name=HG002_chrY_T0000387;gene_name=TTTY23;ID=exon:HG002_chrY_T0000387:1;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5922380	5923152	.	-	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000387;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000387;transcript_name=HG002_chrY_T0000387;gene_name=TTTY23;ID=intron:HG002_chrY_T0000387:1;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5923153	5923298	.	-	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000387;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000387;transcript_name=HG002_chrY_T0000387;gene_name=TTTY23;ID=exon:HG002_chrY_T0000387:2;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5923299	5923411	.	-	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000387;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000387;transcript_name=HG002_chrY_T0000387;gene_name=TTTY23;ID=intron:HG002_chrY_T0000387:2;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5923412	5923501	.	-	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000387;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000387;transcript_name=HG002_chrY_T0000387;gene_name=TTTY23;ID=exon:HG002_chrY_T0000387:3;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5923502	5925763	.	-	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000387;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000387;transcript_name=HG002_chrY_T0000387;gene_name=TTTY23;ID=intron:HG002_chrY_T0000387:3;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5925764	5925927	.	-	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000387;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000387;transcript_name=HG002_chrY_T0000387;gene_name=TTTY23;ID=exon:HG002_chrY_T0000387:4;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	5922304	5923468	1000	-	.	source_transcript=ENST00000452889.1;source_transcript_name=TTTY23-201;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452889.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000388;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_G0000090;transcript_name=HG002_chrY_T0000388;gene_name=TTTY23;ID=HG002_chrY_T0000388;Name=TTTY23
HG002_chrY	CAT	exon	5922304	5922612	.	-	.	source_transcript=ENST00000452889.1;source_transcript_name=TTTY23-201;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000388;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000388;transcript_name=HG002_chrY_T0000388;gene_name=TTTY23;ID=exon:HG002_chrY_T0000388:0;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5922613	5923152	.	-	.	source_transcript=ENST00000452889.1;source_transcript_name=TTTY23-201;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000388;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000388;transcript_name=HG002_chrY_T0000388;gene_name=TTTY23;ID=intron:HG002_chrY_T0000388:0;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5923153	5923298	.	-	.	source_transcript=ENST00000452889.1;source_transcript_name=TTTY23-201;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000388;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000388;transcript_name=HG002_chrY_T0000388;gene_name=TTTY23;ID=exon:HG002_chrY_T0000388:1;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5923299	5923411	.	-	.	source_transcript=ENST00000452889.1;source_transcript_name=TTTY23-201;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000388;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000388;transcript_name=HG002_chrY_T0000388;gene_name=TTTY23;ID=intron:HG002_chrY_T0000388:1;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5923412	5923468	.	-	.	source_transcript=ENST00000452889.1;source_transcript_name=TTTY23-201;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG002_chrY_T0000388;gene_id=HG002_chrY_G0000090;Parent=HG002_chrY_T0000388;transcript_name=HG002_chrY_T0000388;gene_name=TTTY23;ID=exon:HG002_chrY_T0000388:2;Name=TTTY23;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	5926127	5928671	.	+	.	source_gene_common_name=TSPY13P;source_gene=ENSG00000187657.6;gene_id=HG002_chrY_G0000091;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY13P;gene_sources=liftoff;ID=HG002_chrY_G0000091;Name=TSPY13P
HG002_chrY	CAT	transcript	5926127	5928671	1000	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG002_chrY_T0000389;gene_id=HG002_chrY_G0000091;Parent=HG002_chrY_G0000091;transcript_name=HG002_chrY_T0000389;gene_name=TSPY13P;ID=HG002_chrY_T0000389;Name=TSPY13P
HG002_chrY	CAT	exon	5926127	5926603	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG002_chrY_T0000389;gene_id=HG002_chrY_G0000091;Parent=HG002_chrY_T0000389;transcript_name=HG002_chrY_T0000389;gene_name=TSPY13P;ID=exon:HG002_chrY_T0000389:0;Name=TSPY13P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5926604	5927209	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG002_chrY_T0000389;gene_id=HG002_chrY_G0000091;Parent=HG002_chrY_T0000389;transcript_name=HG002_chrY_T0000389;gene_name=TSPY13P;ID=intron:HG002_chrY_T0000389:0;Name=TSPY13P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5927210	5927287	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG002_chrY_T0000389;gene_id=HG002_chrY_G0000091;Parent=HG002_chrY_T0000389;transcript_name=HG002_chrY_T0000389;gene_name=TSPY13P;ID=exon:HG002_chrY_T0000389:1;Name=TSPY13P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5927288	5927415	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG002_chrY_T0000389;gene_id=HG002_chrY_G0000091;Parent=HG002_chrY_T0000389;transcript_name=HG002_chrY_T0000389;gene_name=TSPY13P;ID=intron:HG002_chrY_T0000389:1;Name=TSPY13P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5927416	5927526	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG002_chrY_T0000389;gene_id=HG002_chrY_G0000091;Parent=HG002_chrY_T0000389;transcript_name=HG002_chrY_T0000389;gene_name=TSPY13P;ID=exon:HG002_chrY_T0000389:2;Name=TSPY13P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5927527	5927625	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG002_chrY_T0000389;gene_id=HG002_chrY_G0000091;Parent=HG002_chrY_T0000389;transcript_name=HG002_chrY_T0000389;gene_name=TSPY13P;ID=intron:HG002_chrY_T0000389:2;Name=TSPY13P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5927626	5927768	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG002_chrY_T0000389;gene_id=HG002_chrY_G0000091;Parent=HG002_chrY_T0000389;transcript_name=HG002_chrY_T0000389;gene_name=TSPY13P;ID=exon:HG002_chrY_T0000389:3;Name=TSPY13P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5927769	5927877	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG002_chrY_T0000389;gene_id=HG002_chrY_G0000091;Parent=HG002_chrY_T0000389;transcript_name=HG002_chrY_T0000389;gene_name=TSPY13P;ID=intron:HG002_chrY_T0000389:3;Name=TSPY13P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5927878	5927962	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG002_chrY_T0000389;gene_id=HG002_chrY_G0000091;Parent=HG002_chrY_T0000389;transcript_name=HG002_chrY_T0000389;gene_name=TSPY13P;ID=exon:HG002_chrY_T0000389:4;Name=TSPY13P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5927963	5928651	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG002_chrY_T0000389;gene_id=HG002_chrY_G0000091;Parent=HG002_chrY_T0000389;transcript_name=HG002_chrY_T0000389;gene_name=TSPY13P;ID=intron:HG002_chrY_T0000389:4;Name=TSPY13P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5928652	5928671	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG002_chrY_T0000389;gene_id=HG002_chrY_G0000091;Parent=HG002_chrY_T0000389;transcript_name=HG002_chrY_T0000389;gene_name=TSPY13P;ID=exon:HG002_chrY_T0000389:5;Name=TSPY13P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	5926129	5935480	.	+	.	source_gene_common_name=ENSG00000309435;source_gene=ENSG00000309435.1;gene_id=HG002_chrY_G0000092;gene_biotype=lncRNA;gene_name=ENSG00000309435;gene_sources=liftoff;ID=HG002_chrY_G0000092;Name=ENSG00000309435
HG002_chrY	CAT	transcript	5926129	5934757	1000	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=286.313;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000390;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_G0000092;transcript_name=HG002_chrY_T0000390;gene_name=ENSG00000309435;ID=HG002_chrY_T0000390;Name=ENSG00000309435
HG002_chrY	CAT	exon	5926129	5926213	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=286.313;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000390;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000390;transcript_name=HG002_chrY_T0000390;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000390:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5926214	5926636	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=286.313;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000390;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000390;transcript_name=HG002_chrY_T0000390;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000390:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5926637	5926879	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=286.313;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000390;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000390;transcript_name=HG002_chrY_T0000390;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000390:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5926880	5927227	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=286.313;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000390;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000390;transcript_name=HG002_chrY_T0000390;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000390:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5927228	5927287	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=286.313;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000390;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000390;transcript_name=HG002_chrY_T0000390;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000390:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5927288	5927415	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=286.313;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000390;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000390;transcript_name=HG002_chrY_T0000390;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000390:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5927416	5927526	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=286.313;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000390;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000390;transcript_name=HG002_chrY_T0000390;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000390:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5927527	5927875	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=286.313;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000390;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000390;transcript_name=HG002_chrY_T0000390;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000390:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5927876	5927998	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=286.313;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000390;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000390;transcript_name=HG002_chrY_T0000390;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000390:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5927999	5928651	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=286.313;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000390;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000390;transcript_name=HG002_chrY_T0000390;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000390:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5928652	5928665	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=286.313;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000390;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000390;transcript_name=HG002_chrY_T0000390;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000390:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5928666	5930087	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=286.313;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000390;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000390;transcript_name=HG002_chrY_T0000390;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000390:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5930088	5930183	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=286.313;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000390;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000390;transcript_name=HG002_chrY_T0000390;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000390:6;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5930184	5934141	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=286.313;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000390;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000390;transcript_name=HG002_chrY_T0000390;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000390:6;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5934142	5934757	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=286.313;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000390;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000390;transcript_name=HG002_chrY_T0000390;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000390:7;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	5926136	5935480	1000	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=284.9962857142857;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000391;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_G0000092;transcript_name=HG002_chrY_T0000391;gene_name=ENSG00000309435;ID=HG002_chrY_T0000391;Name=ENSG00000309435
HG002_chrY	CAT	exon	5926136	5926603	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=284.9962857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000391;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000391;transcript_name=HG002_chrY_T0000391;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000391:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5926604	5927209	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=284.9962857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000391;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000391;transcript_name=HG002_chrY_T0000391;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000391:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5927210	5927287	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=284.9962857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000391;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000391;transcript_name=HG002_chrY_T0000391;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000391:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5927288	5927415	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=284.9962857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000391;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000391;transcript_name=HG002_chrY_T0000391;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000391:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5927416	5927526	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=284.9962857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000391;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000391;transcript_name=HG002_chrY_T0000391;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000391:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5927527	5927875	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=284.9962857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000391;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000391;transcript_name=HG002_chrY_T0000391;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000391:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5927876	5927998	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=284.9962857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000391;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000391;transcript_name=HG002_chrY_T0000391;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000391:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5927999	5928651	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=284.9962857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000391;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000391;transcript_name=HG002_chrY_T0000391;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000391:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5928652	5928665	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=284.9962857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000391;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000391;transcript_name=HG002_chrY_T0000391;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000391:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5928666	5930087	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=284.9962857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000391;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000391;transcript_name=HG002_chrY_T0000391;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000391:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5930088	5930183	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=284.9962857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000391;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000391;transcript_name=HG002_chrY_T0000391;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000391:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5930184	5934141	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=284.9962857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000391;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000391;transcript_name=HG002_chrY_T0000391;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000391:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5934142	5935480	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=284.9962857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000391;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000391;transcript_name=HG002_chrY_T0000391;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000391:6;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	5926136	5934757	1000	+	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=273.473;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000392;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_G0000092;transcript_name=HG002_chrY_T0000392;gene_name=ENSG00000309435;ID=HG002_chrY_T0000392;Name=ENSG00000309435
HG002_chrY	CAT	exon	5926136	5926213	.	+	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=273.473;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000392;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000392;transcript_name=HG002_chrY_T0000392;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000392:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5926214	5926636	.	+	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=273.473;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000392;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000392;transcript_name=HG002_chrY_T0000392;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000392:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5926637	5926879	.	+	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=273.473;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000392;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000392;transcript_name=HG002_chrY_T0000392;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000392:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5926880	5927415	.	+	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=273.473;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000392;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000392;transcript_name=HG002_chrY_T0000392;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000392:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5927416	5927526	.	+	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=273.473;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000392;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000392;transcript_name=HG002_chrY_T0000392;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000392:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5927527	5934141	.	+	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=273.473;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000392;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000392;transcript_name=HG002_chrY_T0000392;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000392:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5934142	5934757	.	+	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=273.473;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000392;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000392;transcript_name=HG002_chrY_T0000392;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000392:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	5926138	5929204	1000	+	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000393;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_G0000092;transcript_name=HG002_chrY_T0000393;gene_name=ENSG00000309435;ID=HG002_chrY_T0000393;Name=ENSG00000309435
HG002_chrY	CAT	exon	5926138	5926213	.	+	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000393;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000393;transcript_name=HG002_chrY_T0000393;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000393:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5926214	5926636	.	+	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000393;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000393;transcript_name=HG002_chrY_T0000393;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000393:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5926637	5926879	.	+	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000393;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000393;transcript_name=HG002_chrY_T0000393;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000393:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5926880	5927227	.	+	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000393;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000393;transcript_name=HG002_chrY_T0000393;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000393:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5927228	5927287	.	+	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000393;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000393;transcript_name=HG002_chrY_T0000393;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000393:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5927288	5927415	.	+	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000393;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000393;transcript_name=HG002_chrY_T0000393;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000393:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5927416	5927526	.	+	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000393;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000393;transcript_name=HG002_chrY_T0000393;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000393:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5927527	5928651	.	+	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000393;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000393;transcript_name=HG002_chrY_T0000393;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000393:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5928652	5929204	.	+	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000393;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000393;transcript_name=HG002_chrY_T0000393;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000393:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	5926144	5934757	1000	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=286.293;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000394;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_G0000092;transcript_name=HG002_chrY_T0000394;gene_name=ENSG00000309435;ID=HG002_chrY_T0000394;Name=ENSG00000309435
HG002_chrY	CAT	exon	5926144	5926213	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=286.293;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000394;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000394;transcript_name=HG002_chrY_T0000394;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000394:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5926214	5926636	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=286.293;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000394;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000394;transcript_name=HG002_chrY_T0000394;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000394:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5926637	5926879	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=286.293;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000394;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000394;transcript_name=HG002_chrY_T0000394;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000394:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5926880	5927227	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=286.293;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000394;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000394;transcript_name=HG002_chrY_T0000394;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000394:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5927228	5927287	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=286.293;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000394;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000394;transcript_name=HG002_chrY_T0000394;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000394:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5927288	5927415	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=286.293;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000394;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000394;transcript_name=HG002_chrY_T0000394;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000394:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5927416	5927526	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=286.293;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000394;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000394;transcript_name=HG002_chrY_T0000394;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000394:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5927527	5927875	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=286.293;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000394;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000394;transcript_name=HG002_chrY_T0000394;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000394:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5927876	5927998	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=286.293;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000394;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000394;transcript_name=HG002_chrY_T0000394;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000394:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5927999	5928651	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=286.293;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000394;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000394;transcript_name=HG002_chrY_T0000394;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000394:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5928652	5928665	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=286.293;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000394;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000394;transcript_name=HG002_chrY_T0000394;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000394:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5928666	5930068	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=286.293;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000394;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000394;transcript_name=HG002_chrY_T0000394;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000394:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5930069	5930322	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=286.293;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000394;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000394;transcript_name=HG002_chrY_T0000394;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000394:6;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5930323	5934141	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=286.293;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000394;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000394;transcript_name=HG002_chrY_T0000394;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000394:6;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5934142	5934757	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=286.293;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000394;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000394;transcript_name=HG002_chrY_T0000394;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000394:7;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	5926153	5929203	1000	+	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000395;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_G0000092;transcript_name=HG002_chrY_T0000395;gene_name=ENSG00000309435;ID=HG002_chrY_T0000395;Name=ENSG00000309435
HG002_chrY	CAT	exon	5926153	5926213	.	+	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000395;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000395;transcript_name=HG002_chrY_T0000395;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000395:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5926214	5926636	.	+	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000395;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000395;transcript_name=HG002_chrY_T0000395;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000395:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5926637	5926879	.	+	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000395;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000395;transcript_name=HG002_chrY_T0000395;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000395:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5926880	5927415	.	+	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000395;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000395;transcript_name=HG002_chrY_T0000395;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000395:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5927416	5927526	.	+	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000395;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000395;transcript_name=HG002_chrY_T0000395;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000395:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5927527	5928651	.	+	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000395;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000395;transcript_name=HG002_chrY_T0000395;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000395:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5928652	5929203	.	+	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000395;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000395;transcript_name=HG002_chrY_T0000395;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000395:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	5926155	5934770	1000	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=286.354;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000396;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_G0000092;transcript_name=HG002_chrY_T0000396;gene_name=ENSG00000309435;ID=HG002_chrY_T0000396;Name=ENSG00000309435
HG002_chrY	CAT	exon	5926155	5926213	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=286.354;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000396;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000396;transcript_name=HG002_chrY_T0000396;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000396:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5926214	5926636	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=286.354;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000396;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000396;transcript_name=HG002_chrY_T0000396;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000396:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5926637	5926879	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=286.354;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000396;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000396;transcript_name=HG002_chrY_T0000396;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000396:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5926880	5927166	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=286.354;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000396;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000396;transcript_name=HG002_chrY_T0000396;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000396:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5927167	5927287	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=286.354;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000396;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000396;transcript_name=HG002_chrY_T0000396;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000396:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5927288	5927415	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=286.354;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000396;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000396;transcript_name=HG002_chrY_T0000396;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000396:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5927416	5927526	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=286.354;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000396;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000396;transcript_name=HG002_chrY_T0000396;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000396:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5927527	5927875	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=286.354;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000396;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000396;transcript_name=HG002_chrY_T0000396;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000396:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5927876	5927998	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=286.354;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000396;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000396;transcript_name=HG002_chrY_T0000396;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000396:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5927999	5928651	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=286.354;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000396;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000396;transcript_name=HG002_chrY_T0000396;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000396:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5928652	5928665	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=286.354;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000396;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000396;transcript_name=HG002_chrY_T0000396;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000396:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5928666	5930087	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=286.354;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000396;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000396;transcript_name=HG002_chrY_T0000396;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000396:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5930088	5930183	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=286.354;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000396;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000396;transcript_name=HG002_chrY_T0000396;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000396:6;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5930184	5934141	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=286.354;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000396;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000396;transcript_name=HG002_chrY_T0000396;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000396:6;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5934142	5934770	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=286.354;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000396;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000396;transcript_name=HG002_chrY_T0000396;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000396:7;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	5926155	5934757	1000	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=284.4472857142857;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000397;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_G0000092;transcript_name=HG002_chrY_T0000397;gene_name=ENSG00000309435;ID=HG002_chrY_T0000397;Name=ENSG00000309435
HG002_chrY	CAT	exon	5926155	5926213	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=284.4472857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000397;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000397;transcript_name=HG002_chrY_T0000397;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000397:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5926214	5926636	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=284.4472857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000397;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000397;transcript_name=HG002_chrY_T0000397;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000397:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5926637	5926879	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=284.4472857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000397;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000397;transcript_name=HG002_chrY_T0000397;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000397:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5926880	5927415	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=284.4472857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000397;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000397;transcript_name=HG002_chrY_T0000397;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000397:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5927416	5927526	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=284.4472857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000397;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000397;transcript_name=HG002_chrY_T0000397;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000397:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5927527	5927875	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=284.4472857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000397;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000397;transcript_name=HG002_chrY_T0000397;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000397:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5927876	5927998	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=284.4472857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000397;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000397;transcript_name=HG002_chrY_T0000397;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000397:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5927999	5928651	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=284.4472857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000397;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000397;transcript_name=HG002_chrY_T0000397;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000397:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5928652	5928665	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=284.4472857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000397;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000397;transcript_name=HG002_chrY_T0000397;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000397:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5928666	5930087	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=284.4472857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000397;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000397;transcript_name=HG002_chrY_T0000397;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000397:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5930088	5930183	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=284.4472857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000397;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000397;transcript_name=HG002_chrY_T0000397;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000397:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5930184	5934141	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=284.4472857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000397;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000397;transcript_name=HG002_chrY_T0000397;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000397:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5934142	5934757	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=284.4472857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000397;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000397;transcript_name=HG002_chrY_T0000397;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000397:6;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	5926162	5930639	1000	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000398;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_G0000092;transcript_name=HG002_chrY_T0000398;gene_name=ENSG00000309435;ID=HG002_chrY_T0000398;Name=ENSG00000309435
HG002_chrY	CAT	exon	5926162	5926213	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000398;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000398;transcript_name=HG002_chrY_T0000398;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000398:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5926214	5926636	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000398;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000398;transcript_name=HG002_chrY_T0000398;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000398:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5926637	5926879	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000398;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000398;transcript_name=HG002_chrY_T0000398;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000398:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5926880	5927227	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000398;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000398;transcript_name=HG002_chrY_T0000398;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000398:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5927228	5927287	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000398;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000398;transcript_name=HG002_chrY_T0000398;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000398:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5927288	5927415	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000398;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000398;transcript_name=HG002_chrY_T0000398;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000398:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5927416	5927526	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000398;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000398;transcript_name=HG002_chrY_T0000398;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000398:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5927527	5927875	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000398;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000398;transcript_name=HG002_chrY_T0000398;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000398:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5927876	5927998	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000398;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000398;transcript_name=HG002_chrY_T0000398;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000398:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5927999	5928651	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000398;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000398;transcript_name=HG002_chrY_T0000398;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000398:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5928652	5928665	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000398;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000398;transcript_name=HG002_chrY_T0000398;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000398:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5928666	5930087	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000398;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000398;transcript_name=HG002_chrY_T0000398;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000398:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5930088	5930639	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000398;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000398;transcript_name=HG002_chrY_T0000398;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000398:6;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	5926176	5934757	1000	+	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=273.946;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000399;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_G0000092;transcript_name=HG002_chrY_T0000399;gene_name=ENSG00000309435;ID=HG002_chrY_T0000399;Name=ENSG00000309435
HG002_chrY	CAT	exon	5926176	5926603	.	+	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=273.946;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000399;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000399;transcript_name=HG002_chrY_T0000399;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000399:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5926604	5927209	.	+	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=273.946;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000399;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000399;transcript_name=HG002_chrY_T0000399;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000399:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5927210	5927287	.	+	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=273.946;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000399;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000399;transcript_name=HG002_chrY_T0000399;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000399:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5927288	5927415	.	+	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=273.946;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000399;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000399;transcript_name=HG002_chrY_T0000399;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000399:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5927416	5927526	.	+	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=273.946;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000399;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000399;transcript_name=HG002_chrY_T0000399;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000399:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5927527	5934141	.	+	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=273.946;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000399;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000399;transcript_name=HG002_chrY_T0000399;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000399:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5934142	5934757	.	+	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=273.946;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000399;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000399;transcript_name=HG002_chrY_T0000399;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000399:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	5926757	5934757	1000	+	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=299.121;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000400;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_G0000092;transcript_name=HG002_chrY_T0000400;gene_name=ENSG00000309435;ID=HG002_chrY_T0000400;Name=ENSG00000309435
HG002_chrY	CAT	exon	5926757	5926879	.	+	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=299.121;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000400;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000400;transcript_name=HG002_chrY_T0000400;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000400:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5926880	5927227	.	+	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=299.121;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000400;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000400;transcript_name=HG002_chrY_T0000400;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000400:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5927228	5927287	.	+	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=299.121;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000400;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000400;transcript_name=HG002_chrY_T0000400;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000400:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5927288	5927415	.	+	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=299.121;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000400;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000400;transcript_name=HG002_chrY_T0000400;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000400:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5927416	5927526	.	+	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=299.121;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000400;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000400;transcript_name=HG002_chrY_T0000400;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000400:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5927527	5934141	.	+	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=299.121;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000400;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000400;transcript_name=HG002_chrY_T0000400;gene_name=ENSG00000309435;ID=intron:HG002_chrY_T0000400:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5934142	5934757	.	+	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=299.121;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG002_chrY_T0000400;gene_id=HG002_chrY_G0000092;Parent=HG002_chrY_T0000400;transcript_name=HG002_chrY_T0000400;gene_name=ENSG00000309435;ID=exon:HG002_chrY_T0000400:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	5933121	5933607	.	-	.	source_gene_common_name=ENSG00000275352;source_gene=ENSG00000275352.1;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;gene_id=HG002_chrY_G0000093;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000275352;gene_sources=liftoff;ID=HG002_chrY_G0000093;Name=ENSG00000275352
HG002_chrY	CAT	transcript	5933121	5933607	1000	-	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;transcript_id=HG002_chrY_T0000401;gene_id=HG002_chrY_G0000093;Parent=HG002_chrY_G0000093;transcript_name=HG002_chrY_T0000401;gene_name=ENSG00000275352;ID=HG002_chrY_T0000401;Name=ENSG00000275352
HG002_chrY	CAT	exon	5933121	5933203	.	-	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;transcript_id=HG002_chrY_T0000401;gene_id=HG002_chrY_G0000093;Parent=HG002_chrY_T0000401;transcript_name=HG002_chrY_T0000401;gene_name=ENSG00000275352;ID=exon:HG002_chrY_T0000401:0;Name=ENSG00000275352;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5933204	5933309	.	-	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;transcript_id=HG002_chrY_T0000401;gene_id=HG002_chrY_G0000093;Parent=HG002_chrY_T0000401;transcript_name=HG002_chrY_T0000401;gene_name=ENSG00000275352;ID=intron:HG002_chrY_T0000401:0;Name=ENSG00000275352;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5933310	5933454	.	-	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;transcript_id=HG002_chrY_T0000401;gene_id=HG002_chrY_G0000093;Parent=HG002_chrY_T0000401;transcript_name=HG002_chrY_T0000401;gene_name=ENSG00000275352;ID=exon:HG002_chrY_T0000401:1;Name=ENSG00000275352;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5933455	5933543	.	-	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;transcript_id=HG002_chrY_T0000401;gene_id=HG002_chrY_G0000093;Parent=HG002_chrY_T0000401;transcript_name=HG002_chrY_T0000401;gene_name=ENSG00000275352;ID=intron:HG002_chrY_T0000401:1;Name=ENSG00000275352;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5933544	5933607	.	-	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;transcript_id=HG002_chrY_T0000401;gene_id=HG002_chrY_G0000093;Parent=HG002_chrY_T0000401;transcript_name=HG002_chrY_T0000401;gene_name=ENSG00000275352;ID=exon:HG002_chrY_T0000401:2;Name=ENSG00000275352;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	5961879	5962996	.	-	.	source_gene_common_name=TSPY18P;source_gene=ENSG00000231874.3;alternative_source_transcripts=ENST00000418461.1,ENST00000418461.1;gene_id=HG002_chrY_G0000094;gene_biotype=unprocessed_pseudogene;gene_name=TSPY18P;gene_sources=liftoff;ID=HG002_chrY_G0000094;Name=TSPY18P
HG002_chrY	CAT	transcript	5961879	5962996	1000	-	.	source_transcript=ENST00000441642.1;source_transcript_name=TSPY18P-201;source_gene=ENSG00000231874.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231874.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441642.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441642.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY18P;alternative_source_transcripts=ENST00000418461.1,ENST00000418461.1;transcript_id=HG002_chrY_T0000402;gene_id=HG002_chrY_G0000094;Parent=HG002_chrY_G0000094;transcript_name=HG002_chrY_T0000402;gene_name=TSPY18P;ID=HG002_chrY_T0000402;Name=TSPY18P
HG002_chrY	CAT	exon	5961879	5961911	.	-	.	source_transcript=ENST00000441642.1;source_transcript_name=TSPY18P-201;source_gene=ENSG00000231874.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231874.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441642.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441642.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY18P;alternative_source_transcripts=ENST00000418461.1,ENST00000418461.1;transcript_id=HG002_chrY_T0000402;gene_id=HG002_chrY_G0000094;Parent=HG002_chrY_T0000402;transcript_name=HG002_chrY_T0000402;gene_name=TSPY18P;ID=exon:HG002_chrY_T0000402:0;Name=TSPY18P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5961912	5962520	.	-	.	source_transcript=ENST00000441642.1;source_transcript_name=TSPY18P-201;source_gene=ENSG00000231874.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231874.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441642.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441642.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY18P;alternative_source_transcripts=ENST00000418461.1,ENST00000418461.1;transcript_id=HG002_chrY_T0000402;gene_id=HG002_chrY_G0000094;Parent=HG002_chrY_T0000402;transcript_name=HG002_chrY_T0000402;gene_name=TSPY18P;ID=intron:HG002_chrY_T0000402:0;Name=TSPY18P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5962521	5962996	.	-	.	source_transcript=ENST00000441642.1;source_transcript_name=TSPY18P-201;source_gene=ENSG00000231874.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231874.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441642.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441642.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY18P;alternative_source_transcripts=ENST00000418461.1,ENST00000418461.1;transcript_id=HG002_chrY_T0000402;gene_id=HG002_chrY_G0000094;Parent=HG002_chrY_T0000402;transcript_name=HG002_chrY_T0000402;gene_name=TSPY18P;ID=exon:HG002_chrY_T0000402:1;Name=TSPY18P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	5963958	5964198	.	+	.	source_gene_common_name=ENSG00000274445;source_gene=ENSG00000274445.1;gene_id=HG002_chrY_G0000095;gene_biotype=processed_pseudogene;gene_name=ENSG00000274445;gene_sources=liftoff;ID=HG002_chrY_G0000095;Name=ENSG00000274445
HG002_chrY	CAT	transcript	5963958	5964198	1000	+	.	source_transcript=ENST00000612764.1;source_transcript_name=ENST00000612764;source_gene=ENSG00000274445.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274445.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000612764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000612764.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274445;transcript_id=HG002_chrY_T0000403;gene_id=HG002_chrY_G0000095;Parent=HG002_chrY_G0000095;transcript_name=HG002_chrY_T0000403;gene_name=ENSG00000274445;ID=HG002_chrY_T0000403;Name=ENSG00000274445
HG002_chrY	CAT	exon	5963958	5964198	.	+	.	source_transcript=ENST00000612764.1;source_transcript_name=ENST00000612764;source_gene=ENSG00000274445.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274445.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000612764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000612764.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274445;transcript_id=HG002_chrY_T0000403;gene_id=HG002_chrY_G0000095;Parent=HG002_chrY_T0000403;transcript_name=HG002_chrY_T0000403;gene_name=ENSG00000274445;ID=exon:HG002_chrY_T0000403:0;Name=ENSG00000274445;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	5974113	6001582	.	+	.	source_gene_common_name=ENSG00000310196;source_gene=ENSG00000310196.1;gene_id=HG002_chrY_G0000096;gene_biotype=lncRNA;gene_name=ENSG00000310196;gene_sources=liftoff;ID=HG002_chrY_G0000096;Name=ENSG00000310196
HG002_chrY	CAT	transcript	5974113	6001582	1000	+	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;transcript_id=HG002_chrY_T0000404;gene_id=HG002_chrY_G0000096;Parent=HG002_chrY_G0000096;transcript_name=HG002_chrY_T0000404;gene_name=ENSG00000310196;ID=HG002_chrY_T0000404;Name=ENSG00000310196
HG002_chrY	CAT	exon	5974113	5974591	.	+	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;transcript_id=HG002_chrY_T0000404;gene_id=HG002_chrY_G0000096;Parent=HG002_chrY_T0000404;transcript_name=HG002_chrY_T0000404;gene_name=ENSG00000310196;ID=exon:HG002_chrY_T0000404:0;Name=ENSG00000310196;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5974592	5996663	.	+	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;transcript_id=HG002_chrY_T0000404;gene_id=HG002_chrY_G0000096;Parent=HG002_chrY_T0000404;transcript_name=HG002_chrY_T0000404;gene_name=ENSG00000310196;ID=intron:HG002_chrY_T0000404:0;Name=ENSG00000310196;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5996664	5996813	.	+	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;transcript_id=HG002_chrY_T0000404;gene_id=HG002_chrY_G0000096;Parent=HG002_chrY_T0000404;transcript_name=HG002_chrY_T0000404;gene_name=ENSG00000310196;ID=exon:HG002_chrY_T0000404:1;Name=ENSG00000310196;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5996814	6000449	.	+	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;transcript_id=HG002_chrY_T0000404;gene_id=HG002_chrY_G0000096;Parent=HG002_chrY_T0000404;transcript_name=HG002_chrY_T0000404;gene_name=ENSG00000310196;ID=intron:HG002_chrY_T0000404:1;Name=ENSG00000310196;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6000450	6000531	.	+	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;transcript_id=HG002_chrY_T0000404;gene_id=HG002_chrY_G0000096;Parent=HG002_chrY_T0000404;transcript_name=HG002_chrY_T0000404;gene_name=ENSG00000310196;ID=exon:HG002_chrY_T0000404:2;Name=ENSG00000310196;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6000532	6000940	.	+	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;transcript_id=HG002_chrY_T0000404;gene_id=HG002_chrY_G0000096;Parent=HG002_chrY_T0000404;transcript_name=HG002_chrY_T0000404;gene_name=ENSG00000310196;ID=intron:HG002_chrY_T0000404:2;Name=ENSG00000310196;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6000941	6001582	.	+	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;transcript_id=HG002_chrY_T0000404;gene_id=HG002_chrY_G0000096;Parent=HG002_chrY_T0000404;transcript_name=HG002_chrY_T0000404;gene_name=ENSG00000310196;ID=exon:HG002_chrY_T0000404:3;Name=ENSG00000310196;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	5985964	6001242	.	+	.	source_gene_common_name=RBMY2NP;source_gene=ENSG00000229208.1;gene_id=HG002_chrY_G0000097;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2NP;gene_sources=liftoff;ID=HG002_chrY_G0000097;Name=RBMY2NP
HG002_chrY	CAT	transcript	5985964	6001242	1000	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG002_chrY_T0000405;gene_id=HG002_chrY_G0000097;Parent=HG002_chrY_G0000097;transcript_name=HG002_chrY_T0000405;gene_name=RBMY2NP;ID=HG002_chrY_T0000405;Name=RBMY2NP
HG002_chrY	CAT	exon	5985964	5986141	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG002_chrY_T0000405;gene_id=HG002_chrY_G0000097;Parent=HG002_chrY_T0000405;transcript_name=HG002_chrY_T0000405;gene_name=RBMY2NP;ID=exon:HG002_chrY_T0000405:0;Name=RBMY2NP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5986142	5996663	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG002_chrY_T0000405;gene_id=HG002_chrY_G0000097;Parent=HG002_chrY_T0000405;transcript_name=HG002_chrY_T0000405;gene_name=RBMY2NP;ID=intron:HG002_chrY_T0000405:0;Name=RBMY2NP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5996664	5996813	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG002_chrY_T0000405;gene_id=HG002_chrY_G0000097;Parent=HG002_chrY_T0000405;transcript_name=HG002_chrY_T0000405;gene_name=RBMY2NP;ID=exon:HG002_chrY_T0000405:1;Name=RBMY2NP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5996814	5998813	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG002_chrY_T0000405;gene_id=HG002_chrY_G0000097;Parent=HG002_chrY_T0000405;transcript_name=HG002_chrY_T0000405;gene_name=RBMY2NP;ID=intron:HG002_chrY_T0000405:1;Name=RBMY2NP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5998814	5998913	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG002_chrY_T0000405;gene_id=HG002_chrY_G0000097;Parent=HG002_chrY_T0000405;transcript_name=HG002_chrY_T0000405;gene_name=RBMY2NP;ID=exon:HG002_chrY_T0000405:2;Name=RBMY2NP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5998914	5999720	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG002_chrY_T0000405;gene_id=HG002_chrY_G0000097;Parent=HG002_chrY_T0000405;transcript_name=HG002_chrY_T0000405;gene_name=RBMY2NP;ID=intron:HG002_chrY_T0000405:2;Name=RBMY2NP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	5999721	5999831	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG002_chrY_T0000405;gene_id=HG002_chrY_G0000097;Parent=HG002_chrY_T0000405;transcript_name=HG002_chrY_T0000405;gene_name=RBMY2NP;ID=exon:HG002_chrY_T0000405:3;Name=RBMY2NP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5999832	6000228	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG002_chrY_T0000405;gene_id=HG002_chrY_G0000097;Parent=HG002_chrY_T0000405;transcript_name=HG002_chrY_T0000405;gene_name=RBMY2NP;ID=intron:HG002_chrY_T0000405:3;Name=RBMY2NP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6000229	6000339	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG002_chrY_T0000405;gene_id=HG002_chrY_G0000097;Parent=HG002_chrY_T0000405;transcript_name=HG002_chrY_T0000405;gene_name=RBMY2NP;ID=exon:HG002_chrY_T0000405:4;Name=RBMY2NP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6000340	6000449	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG002_chrY_T0000405;gene_id=HG002_chrY_G0000097;Parent=HG002_chrY_T0000405;transcript_name=HG002_chrY_T0000405;gene_name=RBMY2NP;ID=intron:HG002_chrY_T0000405:4;Name=RBMY2NP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6000450	6000525	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG002_chrY_T0000405;gene_id=HG002_chrY_G0000097;Parent=HG002_chrY_T0000405;transcript_name=HG002_chrY_T0000405;gene_name=RBMY2NP;ID=exon:HG002_chrY_T0000405:5;Name=RBMY2NP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6000526	6000940	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG002_chrY_T0000405;gene_id=HG002_chrY_G0000097;Parent=HG002_chrY_T0000405;transcript_name=HG002_chrY_T0000405;gene_name=RBMY2NP;ID=intron:HG002_chrY_T0000405:5;Name=RBMY2NP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6000941	6001242	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG002_chrY_T0000405;gene_id=HG002_chrY_G0000097;Parent=HG002_chrY_T0000405;transcript_name=HG002_chrY_T0000405;gene_name=RBMY2NP;ID=exon:HG002_chrY_T0000405:6;Name=RBMY2NP;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	5998765	6048299	.	-	.	source_gene_common_name=TTTY22;source_gene=ENSG00000224075.2;gene_id=HG002_chrY_G0000098;gene_biotype=lncRNA;gene_name=TTTY22;gene_sources=liftoff;ID=HG002_chrY_G0000098;Name=TTTY22
HG002_chrY	CAT	transcript	5998765	6048299	1000	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000406;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_G0000098;transcript_name=HG002_chrY_T0000406;gene_name=TTTY22;ID=HG002_chrY_T0000406;Name=TTTY22
HG002_chrY	CAT	exon	5998765	5998903	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000406;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_T0000406;transcript_name=HG002_chrY_T0000406;gene_name=TTTY22;ID=exon:HG002_chrY_T0000406:0;Name=TTTY22;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	5998904	6001053	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000406;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_T0000406;transcript_name=HG002_chrY_T0000406;gene_name=TTTY22;ID=intron:HG002_chrY_T0000406:0;Name=TTTY22;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6001054	6001226	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000406;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_T0000406;transcript_name=HG002_chrY_T0000406;gene_name=TTTY22;ID=exon:HG002_chrY_T0000406:1;Name=TTTY22;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6001227	6005500	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000406;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_T0000406;transcript_name=HG002_chrY_T0000406;gene_name=TTTY22;ID=intron:HG002_chrY_T0000406:1;Name=TTTY22;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6005501	6005669	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000406;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_T0000406;transcript_name=HG002_chrY_T0000406;gene_name=TTTY22;ID=exon:HG002_chrY_T0000406:2;Name=TTTY22;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6005670	6019270	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000406;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_T0000406;transcript_name=HG002_chrY_T0000406;gene_name=TTTY22;ID=intron:HG002_chrY_T0000406:2;Name=TTTY22;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6019271	6019385	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000406;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_T0000406;transcript_name=HG002_chrY_T0000406;gene_name=TTTY22;ID=exon:HG002_chrY_T0000406:3;Name=TTTY22;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6019386	6022561	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000406;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_T0000406;transcript_name=HG002_chrY_T0000406;gene_name=TTTY22;ID=intron:HG002_chrY_T0000406:3;Name=TTTY22;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6022562	6022600	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000406;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_T0000406;transcript_name=HG002_chrY_T0000406;gene_name=TTTY22;ID=exon:HG002_chrY_T0000406:4;Name=TTTY22;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6022601	6023285	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000406;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_T0000406;transcript_name=HG002_chrY_T0000406;gene_name=TTTY22;ID=intron:HG002_chrY_T0000406:4;Name=TTTY22;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6023286	6023360	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000406;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_T0000406;transcript_name=HG002_chrY_T0000406;gene_name=TTTY22;ID=exon:HG002_chrY_T0000406:5;Name=TTTY22;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6023361	6027785	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000406;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_T0000406;transcript_name=HG002_chrY_T0000406;gene_name=TTTY22;ID=intron:HG002_chrY_T0000406:5;Name=TTTY22;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6027786	6027897	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000406;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_T0000406;transcript_name=HG002_chrY_T0000406;gene_name=TTTY22;ID=exon:HG002_chrY_T0000406:6;Name=TTTY22;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6027898	6034459	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000406;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_T0000406;transcript_name=HG002_chrY_T0000406;gene_name=TTTY22;ID=intron:HG002_chrY_T0000406:6;Name=TTTY22;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6034460	6034712	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000406;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_T0000406;transcript_name=HG002_chrY_T0000406;gene_name=TTTY22;ID=exon:HG002_chrY_T0000406:7;Name=TTTY22;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6034713	6037253	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000406;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_T0000406;transcript_name=HG002_chrY_T0000406;gene_name=TTTY22;ID=intron:HG002_chrY_T0000406:7;Name=TTTY22;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6037254	6037326	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000406;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_T0000406;transcript_name=HG002_chrY_T0000406;gene_name=TTTY22;ID=exon:HG002_chrY_T0000406:8;Name=TTTY22;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6037327	6037702	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000406;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_T0000406;transcript_name=HG002_chrY_T0000406;gene_name=TTTY22;ID=intron:HG002_chrY_T0000406:8;Name=TTTY22;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6037703	6037783	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000406;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_T0000406;transcript_name=HG002_chrY_T0000406;gene_name=TTTY22;ID=exon:HG002_chrY_T0000406:9;Name=TTTY22;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6037784	6045219	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000406;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_T0000406;transcript_name=HG002_chrY_T0000406;gene_name=TTTY22;ID=intron:HG002_chrY_T0000406:9;Name=TTTY22;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6045220	6045375	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000406;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_T0000406;transcript_name=HG002_chrY_T0000406;gene_name=TTTY22;ID=exon:HG002_chrY_T0000406:10;Name=TTTY22;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6045376	6048093	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000406;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_T0000406;transcript_name=HG002_chrY_T0000406;gene_name=TTTY22;ID=intron:HG002_chrY_T0000406:10;Name=TTTY22;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6048094	6048299	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000406;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_T0000406;transcript_name=HG002_chrY_T0000406;gene_name=TTTY22;ID=exon:HG002_chrY_T0000406:11;Name=TTTY22;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6019426	6031520	1000	-	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000408;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_G0000098;transcript_name=HG002_chrY_T0000408;gene_name=TTTY22;ID=HG002_chrY_T0000408;Name=TTTY22
HG002_chrY	CAT	exon	6019426	6019471	.	-	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000408;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_T0000408;transcript_name=HG002_chrY_T0000408;gene_name=TTTY22;ID=exon:HG002_chrY_T0000408:0;Name=TTTY22;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6019472	6022561	.	-	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000408;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_T0000408;transcript_name=HG002_chrY_T0000408;gene_name=TTTY22;ID=intron:HG002_chrY_T0000408:0;Name=TTTY22;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6022562	6022600	.	-	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000408;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_T0000408;transcript_name=HG002_chrY_T0000408;gene_name=TTTY22;ID=exon:HG002_chrY_T0000408:1;Name=TTTY22;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6022601	6023285	.	-	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000408;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_T0000408;transcript_name=HG002_chrY_T0000408;gene_name=TTTY22;ID=intron:HG002_chrY_T0000408:1;Name=TTTY22;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6023286	6023360	.	-	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000408;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_T0000408;transcript_name=HG002_chrY_T0000408;gene_name=TTTY22;ID=exon:HG002_chrY_T0000408:2;Name=TTTY22;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6023361	6027785	.	-	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000408;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_T0000408;transcript_name=HG002_chrY_T0000408;gene_name=TTTY22;ID=intron:HG002_chrY_T0000408:2;Name=TTTY22;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6027786	6027897	.	-	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000408;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_T0000408;transcript_name=HG002_chrY_T0000408;gene_name=TTTY22;ID=exon:HG002_chrY_T0000408:3;Name=TTTY22;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6027898	6031365	.	-	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000408;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_T0000408;transcript_name=HG002_chrY_T0000408;gene_name=TTTY22;ID=intron:HG002_chrY_T0000408:3;Name=TTTY22;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6031366	6031520	.	-	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG002_chrY_T0000408;gene_id=HG002_chrY_G0000098;Parent=HG002_chrY_T0000408;transcript_name=HG002_chrY_T0000408;gene_name=TTTY22;ID=exon:HG002_chrY_T0000408:4;Name=TTTY22;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	6015150	6019356	.	-	.	source_gene_common_name=ENSG00000228379;source_gene=ENSG00000228379.1;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;gene_id=HG002_chrY_G0000099;gene_biotype=lncRNA;gene_name=ENSG00000228379;gene_sources=liftoff;ID=HG002_chrY_G0000099;Name=ENSG00000228379
HG002_chrY	CAT	transcript	6015150	6019356	1000	-	.	source_transcript=ENST00000449963.1;source_transcript_name=ENST00000449963;source_gene=ENSG00000228379.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228379.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449963.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228379;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;transcript_id=HG002_chrY_T0000407;gene_id=HG002_chrY_G0000099;Parent=HG002_chrY_G0000099;transcript_name=HG002_chrY_T0000407;gene_name=ENSG00000228379;ID=HG002_chrY_T0000407;Name=ENSG00000228379
HG002_chrY	CAT	exon	6015150	6015368	.	-	.	source_transcript=ENST00000449963.1;source_transcript_name=ENST00000449963;source_gene=ENSG00000228379.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228379.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228379;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;transcript_id=HG002_chrY_T0000407;gene_id=HG002_chrY_G0000099;Parent=HG002_chrY_T0000407;transcript_name=HG002_chrY_T0000407;gene_name=ENSG00000228379;ID=exon:HG002_chrY_T0000407:0;Name=ENSG00000228379;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6015369	6016626	.	-	.	source_transcript=ENST00000449963.1;source_transcript_name=ENST00000449963;source_gene=ENSG00000228379.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228379.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228379;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;transcript_id=HG002_chrY_T0000407;gene_id=HG002_chrY_G0000099;Parent=HG002_chrY_T0000407;transcript_name=HG002_chrY_T0000407;gene_name=ENSG00000228379;ID=intron:HG002_chrY_T0000407:0;Name=ENSG00000228379;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6016627	6016769	.	-	.	source_transcript=ENST00000449963.1;source_transcript_name=ENST00000449963;source_gene=ENSG00000228379.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228379.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228379;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;transcript_id=HG002_chrY_T0000407;gene_id=HG002_chrY_G0000099;Parent=HG002_chrY_T0000407;transcript_name=HG002_chrY_T0000407;gene_name=ENSG00000228379;ID=exon:HG002_chrY_T0000407:1;Name=ENSG00000228379;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6016770	6019270	.	-	.	source_transcript=ENST00000449963.1;source_transcript_name=ENST00000449963;source_gene=ENSG00000228379.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228379.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228379;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;transcript_id=HG002_chrY_T0000407;gene_id=HG002_chrY_G0000099;Parent=HG002_chrY_T0000407;transcript_name=HG002_chrY_T0000407;gene_name=ENSG00000228379;ID=intron:HG002_chrY_T0000407:1;Name=ENSG00000228379;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6019271	6019356	.	-	.	source_transcript=ENST00000449963.1;source_transcript_name=ENST00000449963;source_gene=ENSG00000228379.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228379.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228379;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;transcript_id=HG002_chrY_T0000407;gene_id=HG002_chrY_G0000099;Parent=HG002_chrY_T0000407;transcript_name=HG002_chrY_T0000407;gene_name=ENSG00000228379;ID=exon:HG002_chrY_T0000407:2;Name=ENSG00000228379;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	6058342	6079515	.	+	.	source_gene_common_name=TTTY1;source_gene=ENSG00000129845.6;gene_id=HG002_chrY_G0000100;gene_biotype=lncRNA;gene_name=TTTY1;gene_sources=liftoff;ID=HG002_chrY_G0000100;Name=TTTY1
HG002_chrY	CAT	transcript	6058342	6073519	1000	+	.	source_transcript=ENST00000805314.1;source_transcript_name=TTTY1-202;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805314.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805314.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;transcript_id=HG002_chrY_T0000409;gene_id=HG002_chrY_G0000100;Parent=HG002_chrY_G0000100;transcript_name=HG002_chrY_T0000409;gene_name=TTTY1;ID=HG002_chrY_T0000409;Name=TTTY1
HG002_chrY	CAT	exon	6058342	6058626	.	+	.	source_transcript=ENST00000805314.1;source_transcript_name=TTTY1-202;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805314.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805314.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;transcript_id=HG002_chrY_T0000409;gene_id=HG002_chrY_G0000100;Parent=HG002_chrY_T0000409;transcript_name=HG002_chrY_T0000409;gene_name=TTTY1;ID=exon:HG002_chrY_T0000409:0;Name=TTTY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6058627	6069073	.	+	.	source_transcript=ENST00000805314.1;source_transcript_name=TTTY1-202;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805314.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805314.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;transcript_id=HG002_chrY_T0000409;gene_id=HG002_chrY_G0000100;Parent=HG002_chrY_T0000409;transcript_name=HG002_chrY_T0000409;gene_name=TTTY1;ID=intron:HG002_chrY_T0000409:0;Name=TTTY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6069074	6069232	.	+	.	source_transcript=ENST00000805314.1;source_transcript_name=TTTY1-202;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805314.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805314.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;transcript_id=HG002_chrY_T0000409;gene_id=HG002_chrY_G0000100;Parent=HG002_chrY_T0000409;transcript_name=HG002_chrY_T0000409;gene_name=TTTY1;ID=exon:HG002_chrY_T0000409:1;Name=TTTY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6069233	6073357	.	+	.	source_transcript=ENST00000805314.1;source_transcript_name=TTTY1-202;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805314.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805314.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;transcript_id=HG002_chrY_T0000409;gene_id=HG002_chrY_G0000100;Parent=HG002_chrY_T0000409;transcript_name=HG002_chrY_T0000409;gene_name=TTTY1;ID=intron:HG002_chrY_T0000409:1;Name=TTTY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6073358	6073519	.	+	.	source_transcript=ENST00000805314.1;source_transcript_name=TTTY1-202;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805314.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805314.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;transcript_id=HG002_chrY_T0000409;gene_id=HG002_chrY_G0000100;Parent=HG002_chrY_T0000409;transcript_name=HG002_chrY_T0000409;gene_name=TTTY1;ID=exon:HG002_chrY_T0000409:2;Name=TTTY1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6058382	6079515	1000	+	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=HG002_chrY_T0000410;gene_id=HG002_chrY_G0000100;Parent=HG002_chrY_G0000100;transcript_name=HG002_chrY_T0000410;gene_name=TTTY1;ID=HG002_chrY_T0000410;Name=TTTY1
HG002_chrY	CAT	exon	6058382	6058626	.	+	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=HG002_chrY_T0000410;gene_id=HG002_chrY_G0000100;Parent=HG002_chrY_T0000410;transcript_name=HG002_chrY_T0000410;gene_name=TTTY1;ID=exon:HG002_chrY_T0000410:0;Name=TTTY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6058627	6062050	.	+	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=HG002_chrY_T0000410;gene_id=HG002_chrY_G0000100;Parent=HG002_chrY_T0000410;transcript_name=HG002_chrY_T0000410;gene_name=TTTY1;ID=intron:HG002_chrY_T0000410:0;Name=TTTY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6062051	6062210	.	+	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=HG002_chrY_T0000410;gene_id=HG002_chrY_G0000100;Parent=HG002_chrY_T0000410;transcript_name=HG002_chrY_T0000410;gene_name=TTTY1;ID=exon:HG002_chrY_T0000410:1;Name=TTTY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6062211	6069073	.	+	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=HG002_chrY_T0000410;gene_id=HG002_chrY_G0000100;Parent=HG002_chrY_T0000410;transcript_name=HG002_chrY_T0000410;gene_name=TTTY1;ID=intron:HG002_chrY_T0000410:1;Name=TTTY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6069074	6069182	.	+	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=HG002_chrY_T0000410;gene_id=HG002_chrY_G0000100;Parent=HG002_chrY_T0000410;transcript_name=HG002_chrY_T0000410;gene_name=TTTY1;ID=exon:HG002_chrY_T0000410:2;Name=TTTY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6069183	6071538	.	+	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=HG002_chrY_T0000410;gene_id=HG002_chrY_G0000100;Parent=HG002_chrY_T0000410;transcript_name=HG002_chrY_T0000410;gene_name=TTTY1;ID=intron:HG002_chrY_T0000410:2;Name=TTTY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6071539	6071676	.	+	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=HG002_chrY_T0000410;gene_id=HG002_chrY_G0000100;Parent=HG002_chrY_T0000410;transcript_name=HG002_chrY_T0000410;gene_name=TTTY1;ID=exon:HG002_chrY_T0000410:3;Name=TTTY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6071677	6079257	.	+	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=HG002_chrY_T0000410;gene_id=HG002_chrY_G0000100;Parent=HG002_chrY_T0000410;transcript_name=HG002_chrY_T0000410;gene_name=TTTY1;ID=intron:HG002_chrY_T0000410:3;Name=TTTY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6079258	6079515	.	+	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=HG002_chrY_T0000410;gene_id=HG002_chrY_G0000100;Parent=HG002_chrY_T0000410;transcript_name=HG002_chrY_T0000410;gene_name=TTTY1;ID=exon:HG002_chrY_T0000410:4;Name=TTTY1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	6074010	6130043	.	-	.	source_gene_common_name=TTTY2B;source_gene=ENSG00000212856.7;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;gene_id=HG002_chrY_G0000101;gene_biotype=lncRNA;gene_name=TTTY2B;gene_sources=liftoff;ID=HG002_chrY_G0000101;Name=TTTY2B
HG002_chrY	CAT	transcript	6074010	6113598	1000	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG002_chrY_T0000411;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_G0000101;transcript_name=HG002_chrY_T0000411;gene_name=TTTY2B;ID=HG002_chrY_T0000411;Name=TTTY2B
HG002_chrY	CAT	exon	6074010	6074874	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG002_chrY_T0000411;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000411;transcript_name=HG002_chrY_T0000411;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000411:0;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6074875	6076097	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG002_chrY_T0000411;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000411;transcript_name=HG002_chrY_T0000411;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000411:0;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6076098	6076295	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG002_chrY_T0000411;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000411;transcript_name=HG002_chrY_T0000411;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000411:1;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6076296	6079324	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG002_chrY_T0000411;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000411;transcript_name=HG002_chrY_T0000411;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000411:1;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6079325	6079481	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG002_chrY_T0000411;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000411;transcript_name=HG002_chrY_T0000411;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000411:2;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6079482	6080094	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG002_chrY_T0000411;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000411;transcript_name=HG002_chrY_T0000411;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000411:2;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6080095	6080322	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG002_chrY_T0000411;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000411;transcript_name=HG002_chrY_T0000411;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000411:3;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6080323	6087716	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG002_chrY_T0000411;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000411;transcript_name=HG002_chrY_T0000411;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000411:3;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6087717	6087803	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG002_chrY_T0000411;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000411;transcript_name=HG002_chrY_T0000411;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000411:4;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6087804	6088154	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG002_chrY_T0000411;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000411;transcript_name=HG002_chrY_T0000411;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000411:4;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6088155	6088259	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG002_chrY_T0000411;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000411;transcript_name=HG002_chrY_T0000411;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000411:5;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6088260	6090279	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG002_chrY_T0000411;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000411;transcript_name=HG002_chrY_T0000411;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000411:5;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6090280	6090357	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG002_chrY_T0000411;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000411;transcript_name=HG002_chrY_T0000411;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000411:6;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6090358	6096882	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG002_chrY_T0000411;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000411;transcript_name=HG002_chrY_T0000411;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000411:6;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6096883	6097093	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG002_chrY_T0000411;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000411;transcript_name=HG002_chrY_T0000411;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000411:7;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6097094	6097267	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG002_chrY_T0000411;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000411;transcript_name=HG002_chrY_T0000411;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000411:7;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6097268	6097355	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG002_chrY_T0000411;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000411;transcript_name=HG002_chrY_T0000411;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000411:8;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6097356	6113397	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG002_chrY_T0000411;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000411;transcript_name=HG002_chrY_T0000411;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000411:8;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6113398	6113598	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=HG002_chrY_T0000411;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000411;transcript_name=HG002_chrY_T0000411;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000411:9;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6074010	6096403	1000	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=HG002_chrY_T0000412;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_G0000101;transcript_name=HG002_chrY_T0000412;gene_name=TTTY2B;ID=HG002_chrY_T0000412;Name=TTTY2B
HG002_chrY	CAT	exon	6074010	6074874	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=HG002_chrY_T0000412;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000412;transcript_name=HG002_chrY_T0000412;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000412:0;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6074875	6076097	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=HG002_chrY_T0000412;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000412;transcript_name=HG002_chrY_T0000412;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000412:0;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6076098	6076295	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=HG002_chrY_T0000412;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000412;transcript_name=HG002_chrY_T0000412;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000412:1;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6076296	6079324	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=HG002_chrY_T0000412;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000412;transcript_name=HG002_chrY_T0000412;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000412:1;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6079325	6079481	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=HG002_chrY_T0000412;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000412;transcript_name=HG002_chrY_T0000412;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000412:2;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6079482	6080173	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=HG002_chrY_T0000412;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000412;transcript_name=HG002_chrY_T0000412;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000412:2;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6080174	6080322	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=HG002_chrY_T0000412;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000412;transcript_name=HG002_chrY_T0000412;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000412:3;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6080323	6087716	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=HG002_chrY_T0000412;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000412;transcript_name=HG002_chrY_T0000412;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000412:3;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6087717	6087803	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=HG002_chrY_T0000412;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000412;transcript_name=HG002_chrY_T0000412;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000412:4;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6087804	6088154	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=HG002_chrY_T0000412;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000412;transcript_name=HG002_chrY_T0000412;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000412:4;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6088155	6088259	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=HG002_chrY_T0000412;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000412;transcript_name=HG002_chrY_T0000412;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000412:5;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6088260	6090279	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=HG002_chrY_T0000412;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000412;transcript_name=HG002_chrY_T0000412;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000412:5;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6090280	6090357	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=HG002_chrY_T0000412;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000412;transcript_name=HG002_chrY_T0000412;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000412:6;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6090358	6096191	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=HG002_chrY_T0000412;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000412;transcript_name=HG002_chrY_T0000412;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000412:6;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6096192	6096403	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=HG002_chrY_T0000412;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000412;transcript_name=HG002_chrY_T0000412;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000412:7;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6074010	6096402	1000	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=HG002_chrY_T0000413;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_G0000101;transcript_name=HG002_chrY_T0000413;gene_name=TTTY2B;ID=HG002_chrY_T0000413;Name=TTTY2B
HG002_chrY	CAT	exon	6074010	6074874	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=HG002_chrY_T0000413;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000413;transcript_name=HG002_chrY_T0000413;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000413:0;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6074875	6076097	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=HG002_chrY_T0000413;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000413;transcript_name=HG002_chrY_T0000413;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000413:0;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6076098	6076295	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=HG002_chrY_T0000413;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000413;transcript_name=HG002_chrY_T0000413;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000413:1;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6076296	6079324	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=HG002_chrY_T0000413;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000413;transcript_name=HG002_chrY_T0000413;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000413:1;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6079325	6079481	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=HG002_chrY_T0000413;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000413;transcript_name=HG002_chrY_T0000413;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000413:2;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6079482	6080173	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=HG002_chrY_T0000413;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000413;transcript_name=HG002_chrY_T0000413;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000413:2;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6080174	6080322	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=HG002_chrY_T0000413;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000413;transcript_name=HG002_chrY_T0000413;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000413:3;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6080323	6090279	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=HG002_chrY_T0000413;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000413;transcript_name=HG002_chrY_T0000413;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000413:3;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6090280	6090357	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=HG002_chrY_T0000413;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000413;transcript_name=HG002_chrY_T0000413;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000413:4;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6090358	6096191	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=HG002_chrY_T0000413;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000413;transcript_name=HG002_chrY_T0000413;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000413:4;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6096192	6096402	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=HG002_chrY_T0000413;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000413;transcript_name=HG002_chrY_T0000413;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000413:5;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6074010	6096402	1000	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG002_chrY_T0000414;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_G0000101;transcript_name=HG002_chrY_T0000414;gene_name=TTTY2B;ID=HG002_chrY_T0000414;Name=TTTY2B
HG002_chrY	CAT	exon	6074010	6074874	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG002_chrY_T0000414;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000414;transcript_name=HG002_chrY_T0000414;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000414:0;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6074875	6076097	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG002_chrY_T0000414;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000414;transcript_name=HG002_chrY_T0000414;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000414:0;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6076098	6076295	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG002_chrY_T0000414;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000414;transcript_name=HG002_chrY_T0000414;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000414:1;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6076296	6076415	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG002_chrY_T0000414;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000414;transcript_name=HG002_chrY_T0000414;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000414:1;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6076416	6076494	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG002_chrY_T0000414;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000414;transcript_name=HG002_chrY_T0000414;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000414:2;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6076495	6078127	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG002_chrY_T0000414;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000414;transcript_name=HG002_chrY_T0000414;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000414:2;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6078128	6078345	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG002_chrY_T0000414;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000414;transcript_name=HG002_chrY_T0000414;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000414:3;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6078346	6078708	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG002_chrY_T0000414;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000414;transcript_name=HG002_chrY_T0000414;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000414:3;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6078709	6078803	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG002_chrY_T0000414;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000414;transcript_name=HG002_chrY_T0000414;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000414:4;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6078804	6079324	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG002_chrY_T0000414;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000414;transcript_name=HG002_chrY_T0000414;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000414:4;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6079325	6079481	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG002_chrY_T0000414;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000414;transcript_name=HG002_chrY_T0000414;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000414:5;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6079482	6080094	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG002_chrY_T0000414;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000414;transcript_name=HG002_chrY_T0000414;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000414:5;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6080095	6080322	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG002_chrY_T0000414;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000414;transcript_name=HG002_chrY_T0000414;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000414:6;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6080323	6090279	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG002_chrY_T0000414;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000414;transcript_name=HG002_chrY_T0000414;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000414:6;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6090280	6090357	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG002_chrY_T0000414;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000414;transcript_name=HG002_chrY_T0000414;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000414:7;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6090358	6096197	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG002_chrY_T0000414;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000414;transcript_name=HG002_chrY_T0000414;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000414:7;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6096198	6096402	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=HG002_chrY_T0000414;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000414;transcript_name=HG002_chrY_T0000414;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000414:8;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6074010	6096390	1000	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=HG002_chrY_T0000415;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_G0000101;transcript_name=HG002_chrY_T0000415;gene_name=TTTY2B;ID=HG002_chrY_T0000415;Name=TTTY2B
HG002_chrY	CAT	exon	6074010	6074874	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=HG002_chrY_T0000415;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000415;transcript_name=HG002_chrY_T0000415;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000415:0;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6074875	6076097	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=HG002_chrY_T0000415;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000415;transcript_name=HG002_chrY_T0000415;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000415:0;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6076098	6076295	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=HG002_chrY_T0000415;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000415;transcript_name=HG002_chrY_T0000415;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000415:1;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6076296	6076415	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=HG002_chrY_T0000415;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000415;transcript_name=HG002_chrY_T0000415;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000415:1;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6076416	6076494	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=HG002_chrY_T0000415;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000415;transcript_name=HG002_chrY_T0000415;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000415:2;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6076495	6079324	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=HG002_chrY_T0000415;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000415;transcript_name=HG002_chrY_T0000415;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000415:2;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6079325	6079481	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=HG002_chrY_T0000415;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000415;transcript_name=HG002_chrY_T0000415;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000415:3;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6079482	6080173	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=HG002_chrY_T0000415;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000415;transcript_name=HG002_chrY_T0000415;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000415:3;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6080174	6080322	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=HG002_chrY_T0000415;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000415;transcript_name=HG002_chrY_T0000415;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000415:4;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6080323	6087716	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=HG002_chrY_T0000415;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000415;transcript_name=HG002_chrY_T0000415;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000415:4;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6087717	6087803	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=HG002_chrY_T0000415;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000415;transcript_name=HG002_chrY_T0000415;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000415:5;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6087804	6090279	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=HG002_chrY_T0000415;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000415;transcript_name=HG002_chrY_T0000415;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000415:5;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6090280	6090357	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=HG002_chrY_T0000415;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000415;transcript_name=HG002_chrY_T0000415;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000415:6;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6090358	6096191	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=HG002_chrY_T0000415;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000415;transcript_name=HG002_chrY_T0000415;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000415:6;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6096192	6096390	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=HG002_chrY_T0000415;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000415;transcript_name=HG002_chrY_T0000415;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000415:7;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6074010	6082571	1000	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG002_chrY_T0000416;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_G0000101;transcript_name=HG002_chrY_T0000416;gene_name=TTTY2B;ID=HG002_chrY_T0000416;Name=TTTY2B
HG002_chrY	CAT	exon	6074010	6074874	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG002_chrY_T0000416;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000416;transcript_name=HG002_chrY_T0000416;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000416:0;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6074875	6076097	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG002_chrY_T0000416;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000416;transcript_name=HG002_chrY_T0000416;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000416:0;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6076098	6076295	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG002_chrY_T0000416;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000416;transcript_name=HG002_chrY_T0000416;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000416:1;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6076296	6076415	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG002_chrY_T0000416;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000416;transcript_name=HG002_chrY_T0000416;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000416:1;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6076416	6076494	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG002_chrY_T0000416;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000416;transcript_name=HG002_chrY_T0000416;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000416:2;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6076495	6078127	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG002_chrY_T0000416;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000416;transcript_name=HG002_chrY_T0000416;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000416:2;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6078128	6078345	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG002_chrY_T0000416;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000416;transcript_name=HG002_chrY_T0000416;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000416:3;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6078346	6079324	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG002_chrY_T0000416;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000416;transcript_name=HG002_chrY_T0000416;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000416:3;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6079325	6079481	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG002_chrY_T0000416;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000416;transcript_name=HG002_chrY_T0000416;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000416:4;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6079482	6080173	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG002_chrY_T0000416;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000416;transcript_name=HG002_chrY_T0000416;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000416:4;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6080174	6080322	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG002_chrY_T0000416;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000416;transcript_name=HG002_chrY_T0000416;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000416:5;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6080323	6080614	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG002_chrY_T0000416;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000416;transcript_name=HG002_chrY_T0000416;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000416:5;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6080615	6080701	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG002_chrY_T0000416;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000416;transcript_name=HG002_chrY_T0000416;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000416:6;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6080702	6082434	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG002_chrY_T0000416;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000416;transcript_name=HG002_chrY_T0000416;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000416:6;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6082435	6082571	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG002_chrY_T0000416;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000416;transcript_name=HG002_chrY_T0000416;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000416:7;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6074195	6092097	1000	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG002_chrY_T0000417;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_G0000101;transcript_name=HG002_chrY_T0000417;gene_name=TTTY2B;ID=HG002_chrY_T0000417;Name=TTTY2B
HG002_chrY	CAT	exon	6074195	6074874	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG002_chrY_T0000417;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000417;transcript_name=HG002_chrY_T0000417;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000417:0;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6074875	6076097	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG002_chrY_T0000417;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000417;transcript_name=HG002_chrY_T0000417;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000417:0;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6076098	6076295	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG002_chrY_T0000417;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000417;transcript_name=HG002_chrY_T0000417;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000417:1;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6076296	6076415	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG002_chrY_T0000417;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000417;transcript_name=HG002_chrY_T0000417;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000417:1;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6076416	6076494	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG002_chrY_T0000417;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000417;transcript_name=HG002_chrY_T0000417;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000417:2;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6076495	6079324	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG002_chrY_T0000417;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000417;transcript_name=HG002_chrY_T0000417;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000417:2;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6079325	6079481	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG002_chrY_T0000417;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000417;transcript_name=HG002_chrY_T0000417;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000417:3;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6079482	6080173	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG002_chrY_T0000417;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000417;transcript_name=HG002_chrY_T0000417;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000417:3;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6080174	6080322	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG002_chrY_T0000417;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000417;transcript_name=HG002_chrY_T0000417;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000417:4;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6080323	6087716	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG002_chrY_T0000417;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000417;transcript_name=HG002_chrY_T0000417;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000417:4;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6087717	6087803	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG002_chrY_T0000417;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000417;transcript_name=HG002_chrY_T0000417;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000417:5;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6087804	6090279	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG002_chrY_T0000417;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000417;transcript_name=HG002_chrY_T0000417;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000417:5;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6090280	6092097	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG002_chrY_T0000417;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000417;transcript_name=HG002_chrY_T0000417;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000417:6;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6074195	6113614	1000	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=HG002_chrY_T0000418;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_G0000101;transcript_name=HG002_chrY_T0000418;gene_name=TTTY2B;ID=HG002_chrY_T0000418;Name=TTTY2B
HG002_chrY	CAT	exon	6074195	6074874	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=HG002_chrY_T0000418;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000418;transcript_name=HG002_chrY_T0000418;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000418:0;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6074875	6076097	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=HG002_chrY_T0000418;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000418;transcript_name=HG002_chrY_T0000418;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000418:0;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6076098	6076295	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=HG002_chrY_T0000418;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000418;transcript_name=HG002_chrY_T0000418;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000418:1;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6076296	6076415	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=HG002_chrY_T0000418;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000418;transcript_name=HG002_chrY_T0000418;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000418:1;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6076416	6076494	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=HG002_chrY_T0000418;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000418;transcript_name=HG002_chrY_T0000418;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000418:2;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6076495	6079324	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=HG002_chrY_T0000418;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000418;transcript_name=HG002_chrY_T0000418;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000418:2;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6079325	6079481	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=HG002_chrY_T0000418;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000418;transcript_name=HG002_chrY_T0000418;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000418:3;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6079482	6080173	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=HG002_chrY_T0000418;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000418;transcript_name=HG002_chrY_T0000418;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000418:3;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6080174	6080322	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=HG002_chrY_T0000418;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000418;transcript_name=HG002_chrY_T0000418;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000418:4;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6080323	6090279	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=HG002_chrY_T0000418;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000418;transcript_name=HG002_chrY_T0000418;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000418:4;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6090280	6090357	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=HG002_chrY_T0000418;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000418;transcript_name=HG002_chrY_T0000418;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000418:5;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6090358	6096882	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=HG002_chrY_T0000418;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000418;transcript_name=HG002_chrY_T0000418;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000418:5;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6096883	6097093	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=HG002_chrY_T0000418;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000418;transcript_name=HG002_chrY_T0000418;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000418:6;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6097094	6113397	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=HG002_chrY_T0000418;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000418;transcript_name=HG002_chrY_T0000418;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000418:6;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6113398	6113614	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=HG002_chrY_T0000418;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000418;transcript_name=HG002_chrY_T0000418;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000418:7;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6074195	6082576	1000	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=HG002_chrY_T0000419;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_G0000101;transcript_name=HG002_chrY_T0000419;gene_name=TTTY2B;ID=HG002_chrY_T0000419;Name=TTTY2B
HG002_chrY	CAT	exon	6074195	6074874	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=HG002_chrY_T0000419;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000419;transcript_name=HG002_chrY_T0000419;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000419:0;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6074875	6076097	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=HG002_chrY_T0000419;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000419;transcript_name=HG002_chrY_T0000419;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000419:0;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6076098	6076295	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=HG002_chrY_T0000419;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000419;transcript_name=HG002_chrY_T0000419;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000419:1;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6076296	6079324	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=HG002_chrY_T0000419;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000419;transcript_name=HG002_chrY_T0000419;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000419:1;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6079325	6079481	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=HG002_chrY_T0000419;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000419;transcript_name=HG002_chrY_T0000419;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000419:2;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6079482	6080173	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=HG002_chrY_T0000419;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000419;transcript_name=HG002_chrY_T0000419;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000419:2;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6080174	6080322	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=HG002_chrY_T0000419;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000419;transcript_name=HG002_chrY_T0000419;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000419:3;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6080323	6080614	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=HG002_chrY_T0000419;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000419;transcript_name=HG002_chrY_T0000419;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000419:3;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6080615	6080701	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=HG002_chrY_T0000419;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000419;transcript_name=HG002_chrY_T0000419;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000419:4;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6080702	6082440	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=HG002_chrY_T0000419;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000419;transcript_name=HG002_chrY_T0000419;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000419:4;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6082441	6082576	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=HG002_chrY_T0000419;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000419;transcript_name=HG002_chrY_T0000419;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000419:5;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6074198	6130043	1000	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=HG002_chrY_T0000420;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_G0000101;transcript_name=HG002_chrY_T0000420;gene_name=TTTY2B;ID=HG002_chrY_T0000420;Name=TTTY2B
HG002_chrY	CAT	exon	6074198	6074874	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=HG002_chrY_T0000420;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000420;transcript_name=HG002_chrY_T0000420;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000420:0;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6074875	6076097	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=HG002_chrY_T0000420;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000420;transcript_name=HG002_chrY_T0000420;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000420:0;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6076098	6076295	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=HG002_chrY_T0000420;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000420;transcript_name=HG002_chrY_T0000420;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000420:1;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6076296	6079324	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=HG002_chrY_T0000420;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000420;transcript_name=HG002_chrY_T0000420;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000420:1;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6079325	6079481	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=HG002_chrY_T0000420;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000420;transcript_name=HG002_chrY_T0000420;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000420:2;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6079482	6080173	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=HG002_chrY_T0000420;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000420;transcript_name=HG002_chrY_T0000420;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000420:2;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6080174	6080322	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=HG002_chrY_T0000420;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000420;transcript_name=HG002_chrY_T0000420;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000420:3;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6080323	6090279	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=HG002_chrY_T0000420;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000420;transcript_name=HG002_chrY_T0000420;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000420:3;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6090280	6090357	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=HG002_chrY_T0000420;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000420;transcript_name=HG002_chrY_T0000420;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000420:4;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6090358	6096882	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=HG002_chrY_T0000420;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000420;transcript_name=HG002_chrY_T0000420;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000420:4;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6096883	6097093	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=HG002_chrY_T0000420;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000420;transcript_name=HG002_chrY_T0000420;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000420:5;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6097094	6097267	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=HG002_chrY_T0000420;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000420;transcript_name=HG002_chrY_T0000420;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000420:5;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6097268	6097355	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=HG002_chrY_T0000420;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000420;transcript_name=HG002_chrY_T0000420;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000420:6;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6097356	6113397	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=HG002_chrY_T0000420;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000420;transcript_name=HG002_chrY_T0000420;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000420:6;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6113398	6114304	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=HG002_chrY_T0000420;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000420;transcript_name=HG002_chrY_T0000420;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000420:7;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6114305	6117288	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=HG002_chrY_T0000420;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000420;transcript_name=HG002_chrY_T0000420;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000420:7;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6117289	6117509	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=HG002_chrY_T0000420;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000420;transcript_name=HG002_chrY_T0000420;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000420:8;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6117510	6118444	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=HG002_chrY_T0000420;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000420;transcript_name=HG002_chrY_T0000420;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000420:8;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6118445	6118612	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=HG002_chrY_T0000420;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000420;transcript_name=HG002_chrY_T0000420;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000420:9;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6118613	6119771	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=HG002_chrY_T0000420;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000420;transcript_name=HG002_chrY_T0000420;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000420:9;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6119772	6119953	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=HG002_chrY_T0000420;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000420;transcript_name=HG002_chrY_T0000420;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000420:10;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6119954	6123899	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=HG002_chrY_T0000420;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000420;transcript_name=HG002_chrY_T0000420;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000420:10;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6123900	6124038	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=HG002_chrY_T0000420;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000420;transcript_name=HG002_chrY_T0000420;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000420:11;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6124039	6129276	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=HG002_chrY_T0000420;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000420;transcript_name=HG002_chrY_T0000420;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000420:11;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6129277	6130043	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=HG002_chrY_T0000420;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000420;transcript_name=HG002_chrY_T0000420;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000420:12;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6074199	6096390	1000	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=HG002_chrY_T0000421;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_G0000101;transcript_name=HG002_chrY_T0000421;gene_name=TTTY2B;ID=HG002_chrY_T0000421;Name=TTTY2B
HG002_chrY	CAT	exon	6074199	6074874	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=HG002_chrY_T0000421;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000421;transcript_name=HG002_chrY_T0000421;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000421:0;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6074875	6076097	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=HG002_chrY_T0000421;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000421;transcript_name=HG002_chrY_T0000421;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000421:0;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6076098	6076295	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=HG002_chrY_T0000421;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000421;transcript_name=HG002_chrY_T0000421;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000421:1;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6076296	6079324	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=HG002_chrY_T0000421;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000421;transcript_name=HG002_chrY_T0000421;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000421:1;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6079325	6079481	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=HG002_chrY_T0000421;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000421;transcript_name=HG002_chrY_T0000421;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000421:2;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6079482	6080094	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=HG002_chrY_T0000421;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000421;transcript_name=HG002_chrY_T0000421;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000421:2;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6080095	6080322	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=HG002_chrY_T0000421;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000421;transcript_name=HG002_chrY_T0000421;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000421:3;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6080323	6090279	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=HG002_chrY_T0000421;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000421;transcript_name=HG002_chrY_T0000421;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000421:3;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6090280	6090357	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=HG002_chrY_T0000421;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000421;transcript_name=HG002_chrY_T0000421;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000421:4;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6090358	6096191	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=HG002_chrY_T0000421;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000421;transcript_name=HG002_chrY_T0000421;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000421:4;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6096192	6096390	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=HG002_chrY_T0000421;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000421;transcript_name=HG002_chrY_T0000421;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000421:5;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6074199	6082561	1000	-	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=HG002_chrY_T0000422;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_G0000101;transcript_name=HG002_chrY_T0000422;gene_name=TTTY2B;ID=HG002_chrY_T0000422;Name=TTTY2B
HG002_chrY	CAT	exon	6074199	6074874	.	-	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=HG002_chrY_T0000422;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000422;transcript_name=HG002_chrY_T0000422;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000422:0;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6074875	6076097	.	-	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=HG002_chrY_T0000422;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000422;transcript_name=HG002_chrY_T0000422;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000422:0;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6076098	6076295	.	-	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=HG002_chrY_T0000422;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000422;transcript_name=HG002_chrY_T0000422;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000422:1;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6076296	6079324	.	-	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=HG002_chrY_T0000422;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000422;transcript_name=HG002_chrY_T0000422;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000422:1;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6079325	6079481	.	-	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=HG002_chrY_T0000422;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000422;transcript_name=HG002_chrY_T0000422;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000422:2;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6079482	6080173	.	-	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=HG002_chrY_T0000422;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000422;transcript_name=HG002_chrY_T0000422;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000422:2;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6080174	6080322	.	-	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=HG002_chrY_T0000422;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000422;transcript_name=HG002_chrY_T0000422;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000422:3;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6080323	6082434	.	-	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=HG002_chrY_T0000422;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000422;transcript_name=HG002_chrY_T0000422;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000422:3;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6082435	6082561	.	-	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=HG002_chrY_T0000422;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000422;transcript_name=HG002_chrY_T0000422;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000422:4;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6074731	6096366	1000	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=HG002_chrY_T0000423;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_G0000101;transcript_name=HG002_chrY_T0000423;gene_name=TTTY2B;ID=HG002_chrY_T0000423;Name=TTTY2B
HG002_chrY	CAT	exon	6074731	6074874	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=HG002_chrY_T0000423;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000423;transcript_name=HG002_chrY_T0000423;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000423:0;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6074875	6076097	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=HG002_chrY_T0000423;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000423;transcript_name=HG002_chrY_T0000423;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000423:0;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6076098	6076295	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=HG002_chrY_T0000423;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000423;transcript_name=HG002_chrY_T0000423;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000423:1;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6076296	6076415	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=HG002_chrY_T0000423;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000423;transcript_name=HG002_chrY_T0000423;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000423:1;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6076416	6076494	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=HG002_chrY_T0000423;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000423;transcript_name=HG002_chrY_T0000423;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000423:2;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6076495	6079324	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=HG002_chrY_T0000423;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000423;transcript_name=HG002_chrY_T0000423;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000423:2;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6079325	6079481	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=HG002_chrY_T0000423;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000423;transcript_name=HG002_chrY_T0000423;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000423:3;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6079482	6080173	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=HG002_chrY_T0000423;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000423;transcript_name=HG002_chrY_T0000423;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000423:3;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6080174	6080322	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=HG002_chrY_T0000423;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000423;transcript_name=HG002_chrY_T0000423;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000423:4;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6080323	6090279	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=HG002_chrY_T0000423;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000423;transcript_name=HG002_chrY_T0000423;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000423:4;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6090280	6090357	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=HG002_chrY_T0000423;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000423;transcript_name=HG002_chrY_T0000423;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000423:5;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6090358	6096191	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=HG002_chrY_T0000423;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000423;transcript_name=HG002_chrY_T0000423;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000423:5;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6096192	6096366	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=HG002_chrY_T0000423;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000423;transcript_name=HG002_chrY_T0000423;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000423:6;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6079233	6120364	1000	-	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735422.1,ENST00000735422.1;transcript_id=HG002_chrY_T0000424;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_G0000101;transcript_name=HG002_chrY_T0000424;gene_name=TTTY2B;ID=HG002_chrY_T0000424;Name=TTTY2B
HG002_chrY	CAT	exon	6079233	6079481	.	-	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735422.1,ENST00000735422.1;transcript_id=HG002_chrY_T0000424;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000424;transcript_name=HG002_chrY_T0000424;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000424:0;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6079482	6080173	.	-	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735422.1,ENST00000735422.1;transcript_id=HG002_chrY_T0000424;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000424;transcript_name=HG002_chrY_T0000424;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000424:0;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6080174	6080322	.	-	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735422.1,ENST00000735422.1;transcript_id=HG002_chrY_T0000424;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000424;transcript_name=HG002_chrY_T0000424;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000424:1;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6080323	6119771	.	-	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735422.1,ENST00000735422.1;transcript_id=HG002_chrY_T0000424;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000424;transcript_name=HG002_chrY_T0000424;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000424:1;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6119772	6119953	.	-	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735422.1,ENST00000735422.1;transcript_id=HG002_chrY_T0000424;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000424;transcript_name=HG002_chrY_T0000424;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000424:2;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6119954	6120301	.	-	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735422.1,ENST00000735422.1;transcript_id=HG002_chrY_T0000424;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000424;transcript_name=HG002_chrY_T0000424;gene_name=TTTY2B;ID=intron:HG002_chrY_T0000424:2;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6120302	6120364	.	-	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735422.1,ENST00000735422.1;transcript_id=HG002_chrY_T0000424;gene_id=HG002_chrY_G0000101;Parent=HG002_chrY_T0000424;transcript_name=HG002_chrY_T0000424;gene_name=TTTY2B;ID=exon:HG002_chrY_T0000424:3;Name=TTTY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	6108818	6125858	.	+	.	source_gene_common_name=TTTY7;source_gene=ENSG00000147753.11;alternative_source_transcripts=ENST00000735957.1,ENST00000735957.1;gene_id=HG002_chrY_G0000102;gene_biotype=lncRNA;gene_name=TTTY7;gene_sources=liftoff;ID=HG002_chrY_G0000102;Name=TTTY7
HG002_chrY	CAT	transcript	6108818	6118640	1000	+	.	source_transcript=ENST00000735957.1;source_transcript_name=TTTY7-208;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735957.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735957.1,ENST00000735957.1;transcript_id=HG002_chrY_T0000425;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_G0000102;transcript_name=HG002_chrY_T0000425;gene_name=TTTY7;ID=HG002_chrY_T0000425;Name=TTTY7
HG002_chrY	CAT	exon	6108818	6109070	.	+	.	source_transcript=ENST00000735957.1;source_transcript_name=TTTY7-208;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735957.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735957.1,ENST00000735957.1;transcript_id=HG002_chrY_T0000425;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000425;transcript_name=HG002_chrY_T0000425;gene_name=TTTY7;ID=exon:HG002_chrY_T0000425:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6109071	6112711	.	+	.	source_transcript=ENST00000735957.1;source_transcript_name=TTTY7-208;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735957.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735957.1,ENST00000735957.1;transcript_id=HG002_chrY_T0000425;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000425;transcript_name=HG002_chrY_T0000425;gene_name=TTTY7;ID=intron:HG002_chrY_T0000425:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6112712	6112869	.	+	.	source_transcript=ENST00000735957.1;source_transcript_name=TTTY7-208;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735957.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735957.1,ENST00000735957.1;transcript_id=HG002_chrY_T0000425;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000425;transcript_name=HG002_chrY_T0000425;gene_name=TTTY7;ID=exon:HG002_chrY_T0000425:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6112870	6118477	.	+	.	source_transcript=ENST00000735957.1;source_transcript_name=TTTY7-208;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735957.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735957.1,ENST00000735957.1;transcript_id=HG002_chrY_T0000425;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000425;transcript_name=HG002_chrY_T0000425;gene_name=TTTY7;ID=intron:HG002_chrY_T0000425:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6118478	6118640	.	+	.	source_transcript=ENST00000735957.1;source_transcript_name=TTTY7-208;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735957.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735957.1,ENST00000735957.1;transcript_id=HG002_chrY_T0000425;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000425;transcript_name=HG002_chrY_T0000425;gene_name=TTTY7;ID=exon:HG002_chrY_T0000425:2;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6111275	6118649	1000	+	.	source_transcript=ENST00000735958.1;source_transcript_name=TTTY7-209;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735958.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735958.1,ENST00000735958.1;transcript_id=HG002_chrY_T0000426;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_G0000102;transcript_name=HG002_chrY_T0000426;gene_name=TTTY7;ID=HG002_chrY_T0000426;Name=TTTY7
HG002_chrY	CAT	exon	6111275	6111587	.	+	.	source_transcript=ENST00000735958.1;source_transcript_name=TTTY7-209;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735958.1,ENST00000735958.1;transcript_id=HG002_chrY_T0000426;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000426;transcript_name=HG002_chrY_T0000426;gene_name=TTTY7;ID=exon:HG002_chrY_T0000426:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6111588	6112711	.	+	.	source_transcript=ENST00000735958.1;source_transcript_name=TTTY7-209;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735958.1,ENST00000735958.1;transcript_id=HG002_chrY_T0000426;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000426;transcript_name=HG002_chrY_T0000426;gene_name=TTTY7;ID=intron:HG002_chrY_T0000426:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6112712	6112869	.	+	.	source_transcript=ENST00000735958.1;source_transcript_name=TTTY7-209;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735958.1,ENST00000735958.1;transcript_id=HG002_chrY_T0000426;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000426;transcript_name=HG002_chrY_T0000426;gene_name=TTTY7;ID=exon:HG002_chrY_T0000426:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6112870	6118477	.	+	.	source_transcript=ENST00000735958.1;source_transcript_name=TTTY7-209;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735958.1,ENST00000735958.1;transcript_id=HG002_chrY_T0000426;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000426;transcript_name=HG002_chrY_T0000426;gene_name=TTTY7;ID=intron:HG002_chrY_T0000426:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6118478	6118649	.	+	.	source_transcript=ENST00000735958.1;source_transcript_name=TTTY7-209;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735958.1,ENST00000735958.1;transcript_id=HG002_chrY_T0000426;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000426;transcript_name=HG002_chrY_T0000426;gene_name=TTTY7;ID=exon:HG002_chrY_T0000426:2;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6111296	6118648	1000	+	.	source_transcript=ENST00000735959.1;source_transcript_name=TTTY7-210;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735959.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735959.1,ENST00000735959.1;transcript_id=HG002_chrY_T0000427;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_G0000102;transcript_name=HG002_chrY_T0000427;gene_name=TTTY7;ID=HG002_chrY_T0000427;Name=TTTY7
HG002_chrY	CAT	exon	6111296	6111587	.	+	.	source_transcript=ENST00000735959.1;source_transcript_name=TTTY7-210;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735959.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735959.1,ENST00000735959.1;transcript_id=HG002_chrY_T0000427;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000427;transcript_name=HG002_chrY_T0000427;gene_name=TTTY7;ID=exon:HG002_chrY_T0000427:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6111588	6118477	.	+	.	source_transcript=ENST00000735959.1;source_transcript_name=TTTY7-210;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735959.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735959.1,ENST00000735959.1;transcript_id=HG002_chrY_T0000427;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000427;transcript_name=HG002_chrY_T0000427;gene_name=TTTY7;ID=intron:HG002_chrY_T0000427:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6118478	6118648	.	+	.	source_transcript=ENST00000735959.1;source_transcript_name=TTTY7-210;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735959.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735959.1,ENST00000735959.1;transcript_id=HG002_chrY_T0000427;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000427;transcript_name=HG002_chrY_T0000427;gene_name=TTTY7;ID=exon:HG002_chrY_T0000427:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6111297	6125858	1000	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=HG002_chrY_T0000428;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_G0000102;transcript_name=HG002_chrY_T0000428;gene_name=TTTY7;ID=HG002_chrY_T0000428;Name=TTTY7
HG002_chrY	CAT	exon	6111297	6111587	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=HG002_chrY_T0000428;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000428;transcript_name=HG002_chrY_T0000428;gene_name=TTTY7;ID=exon:HG002_chrY_T0000428:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6111588	6112711	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=HG002_chrY_T0000428;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000428;transcript_name=HG002_chrY_T0000428;gene_name=TTTY7;ID=intron:HG002_chrY_T0000428:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6112712	6112869	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=HG002_chrY_T0000428;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000428;transcript_name=HG002_chrY_T0000428;gene_name=TTTY7;ID=exon:HG002_chrY_T0000428:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6112870	6118477	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=HG002_chrY_T0000428;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000428;transcript_name=HG002_chrY_T0000428;gene_name=TTTY7;ID=intron:HG002_chrY_T0000428:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6118478	6118559	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=HG002_chrY_T0000428;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000428;transcript_name=HG002_chrY_T0000428;gene_name=TTTY7;ID=exon:HG002_chrY_T0000428:2;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6118560	6120779	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=HG002_chrY_T0000428;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000428;transcript_name=HG002_chrY_T0000428;gene_name=TTTY7;ID=intron:HG002_chrY_T0000428:2;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6120780	6120941	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=HG002_chrY_T0000428;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000428;transcript_name=HG002_chrY_T0000428;gene_name=TTTY7;ID=exon:HG002_chrY_T0000428:3;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6120942	6124023	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=HG002_chrY_T0000428;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000428;transcript_name=HG002_chrY_T0000428;gene_name=TTTY7;ID=intron:HG002_chrY_T0000428:3;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6124024	6124137	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=HG002_chrY_T0000428;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000428;transcript_name=HG002_chrY_T0000428;gene_name=TTTY7;ID=exon:HG002_chrY_T0000428:4;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6124138	6125612	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=HG002_chrY_T0000428;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000428;transcript_name=HG002_chrY_T0000428;gene_name=TTTY7;ID=intron:HG002_chrY_T0000428:4;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6125613	6125858	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=HG002_chrY_T0000428;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000428;transcript_name=HG002_chrY_T0000428;gene_name=TTTY7;ID=exon:HG002_chrY_T0000428:5;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6111297	6125858	1000	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=HG002_chrY_T0000429;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_G0000102;transcript_name=HG002_chrY_T0000429;gene_name=TTTY7;ID=HG002_chrY_T0000429;Name=TTTY7
HG002_chrY	CAT	exon	6111297	6111587	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=HG002_chrY_T0000429;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000429;transcript_name=HG002_chrY_T0000429;gene_name=TTTY7;ID=exon:HG002_chrY_T0000429:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6111588	6118477	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=HG002_chrY_T0000429;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000429;transcript_name=HG002_chrY_T0000429;gene_name=TTTY7;ID=intron:HG002_chrY_T0000429:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6118478	6118559	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=HG002_chrY_T0000429;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000429;transcript_name=HG002_chrY_T0000429;gene_name=TTTY7;ID=exon:HG002_chrY_T0000429:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6118560	6120779	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=HG002_chrY_T0000429;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000429;transcript_name=HG002_chrY_T0000429;gene_name=TTTY7;ID=intron:HG002_chrY_T0000429:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6120780	6120941	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=HG002_chrY_T0000429;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000429;transcript_name=HG002_chrY_T0000429;gene_name=TTTY7;ID=exon:HG002_chrY_T0000429:2;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6120942	6124023	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=HG002_chrY_T0000429;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000429;transcript_name=HG002_chrY_T0000429;gene_name=TTTY7;ID=intron:HG002_chrY_T0000429:2;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6124024	6124137	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=HG002_chrY_T0000429;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000429;transcript_name=HG002_chrY_T0000429;gene_name=TTTY7;ID=exon:HG002_chrY_T0000429:3;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6124138	6125612	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=HG002_chrY_T0000429;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000429;transcript_name=HG002_chrY_T0000429;gene_name=TTTY7;ID=intron:HG002_chrY_T0000429:3;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6125613	6125858	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=HG002_chrY_T0000429;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000429;transcript_name=HG002_chrY_T0000429;gene_name=TTTY7;ID=exon:HG002_chrY_T0000429:4;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6111297	6118648	1000	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=HG002_chrY_T0000430;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_G0000102;transcript_name=HG002_chrY_T0000430;gene_name=TTTY7;ID=HG002_chrY_T0000430;Name=TTTY7
HG002_chrY	CAT	exon	6111297	6111587	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=HG002_chrY_T0000430;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000430;transcript_name=HG002_chrY_T0000430;gene_name=TTTY7;ID=exon:HG002_chrY_T0000430:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6111588	6112711	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=HG002_chrY_T0000430;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000430;transcript_name=HG002_chrY_T0000430;gene_name=TTTY7;ID=intron:HG002_chrY_T0000430:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6112712	6112869	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=HG002_chrY_T0000430;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000430;transcript_name=HG002_chrY_T0000430;gene_name=TTTY7;ID=exon:HG002_chrY_T0000430:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6112870	6114924	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=HG002_chrY_T0000430;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000430;transcript_name=HG002_chrY_T0000430;gene_name=TTTY7;ID=intron:HG002_chrY_T0000430:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6114925	6115058	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=HG002_chrY_T0000430;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000430;transcript_name=HG002_chrY_T0000430;gene_name=TTTY7;ID=exon:HG002_chrY_T0000430:2;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6115059	6115454	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=HG002_chrY_T0000430;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000430;transcript_name=HG002_chrY_T0000430;gene_name=TTTY7;ID=intron:HG002_chrY_T0000430:2;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6115455	6115561	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=HG002_chrY_T0000430;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000430;transcript_name=HG002_chrY_T0000430;gene_name=TTTY7;ID=exon:HG002_chrY_T0000430:3;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6115562	6118477	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=HG002_chrY_T0000430;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000430;transcript_name=HG002_chrY_T0000430;gene_name=TTTY7;ID=intron:HG002_chrY_T0000430:3;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6118478	6118648	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=HG002_chrY_T0000430;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000430;transcript_name=HG002_chrY_T0000430;gene_name=TTTY7;ID=exon:HG002_chrY_T0000430:4;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6111299	6118640	1000	+	.	source_transcript=ENST00000735962.1;source_transcript_name=TTTY7-213;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735962.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735962.1,ENST00000735962.1;transcript_id=HG002_chrY_T0000431;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_G0000102;transcript_name=HG002_chrY_T0000431;gene_name=TTTY7;ID=HG002_chrY_T0000431;Name=TTTY7
HG002_chrY	CAT	exon	6111299	6111587	.	+	.	source_transcript=ENST00000735962.1;source_transcript_name=TTTY7-213;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735962.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735962.1,ENST00000735962.1;transcript_id=HG002_chrY_T0000431;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000431;transcript_name=HG002_chrY_T0000431;gene_name=TTTY7;ID=exon:HG002_chrY_T0000431:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6111588	6115454	.	+	.	source_transcript=ENST00000735962.1;source_transcript_name=TTTY7-213;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735962.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735962.1,ENST00000735962.1;transcript_id=HG002_chrY_T0000431;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000431;transcript_name=HG002_chrY_T0000431;gene_name=TTTY7;ID=intron:HG002_chrY_T0000431:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6115455	6115561	.	+	.	source_transcript=ENST00000735962.1;source_transcript_name=TTTY7-213;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735962.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735962.1,ENST00000735962.1;transcript_id=HG002_chrY_T0000431;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000431;transcript_name=HG002_chrY_T0000431;gene_name=TTTY7;ID=exon:HG002_chrY_T0000431:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6115562	6118477	.	+	.	source_transcript=ENST00000735962.1;source_transcript_name=TTTY7-213;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735962.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735962.1,ENST00000735962.1;transcript_id=HG002_chrY_T0000431;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000431;transcript_name=HG002_chrY_T0000431;gene_name=TTTY7;ID=intron:HG002_chrY_T0000431:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6118478	6118640	.	+	.	source_transcript=ENST00000735962.1;source_transcript_name=TTTY7-213;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735962.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735962.1,ENST00000735962.1;transcript_id=HG002_chrY_T0000431;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000431;transcript_name=HG002_chrY_T0000431;gene_name=TTTY7;ID=exon:HG002_chrY_T0000431:2;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6111300	6118646	1000	+	.	source_transcript=ENST00000421353.3;source_transcript_name=TTTY7-202;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421353.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421353.3;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000421353.3,ENST00000421353.3;transcript_id=HG002_chrY_T0000432;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_G0000102;transcript_name=HG002_chrY_T0000432;gene_name=TTTY7;ID=HG002_chrY_T0000432;Name=TTTY7
HG002_chrY	CAT	exon	6111300	6111587	.	+	.	source_transcript=ENST00000421353.3;source_transcript_name=TTTY7-202;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421353.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421353.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000421353.3,ENST00000421353.3;transcript_id=HG002_chrY_T0000432;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000432;transcript_name=HG002_chrY_T0000432;gene_name=TTTY7;ID=exon:HG002_chrY_T0000432:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6111588	6114924	.	+	.	source_transcript=ENST00000421353.3;source_transcript_name=TTTY7-202;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421353.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421353.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000421353.3,ENST00000421353.3;transcript_id=HG002_chrY_T0000432;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000432;transcript_name=HG002_chrY_T0000432;gene_name=TTTY7;ID=intron:HG002_chrY_T0000432:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6114925	6115058	.	+	.	source_transcript=ENST00000421353.3;source_transcript_name=TTTY7-202;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421353.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421353.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000421353.3,ENST00000421353.3;transcript_id=HG002_chrY_T0000432;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000432;transcript_name=HG002_chrY_T0000432;gene_name=TTTY7;ID=exon:HG002_chrY_T0000432:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6115059	6118477	.	+	.	source_transcript=ENST00000421353.3;source_transcript_name=TTTY7-202;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421353.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421353.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000421353.3,ENST00000421353.3;transcript_id=HG002_chrY_T0000432;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000432;transcript_name=HG002_chrY_T0000432;gene_name=TTTY7;ID=intron:HG002_chrY_T0000432:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6118478	6118646	.	+	.	source_transcript=ENST00000421353.3;source_transcript_name=TTTY7-202;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421353.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421353.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000421353.3,ENST00000421353.3;transcript_id=HG002_chrY_T0000432;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000432;transcript_name=HG002_chrY_T0000432;gene_name=TTTY7;ID=exon:HG002_chrY_T0000432:2;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6111300	6118647	1000	+	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1,ENST00000735961.1;transcript_id=HG002_chrY_T0000433;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_G0000102;transcript_name=HG002_chrY_T0000433;gene_name=TTTY7;ID=HG002_chrY_T0000433;Name=TTTY7
HG002_chrY	CAT	exon	6111300	6111587	.	+	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1,ENST00000735961.1;transcript_id=HG002_chrY_T0000433;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000433;transcript_name=HG002_chrY_T0000433;gene_name=TTTY7;ID=exon:HG002_chrY_T0000433:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6111588	6114924	.	+	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1,ENST00000735961.1;transcript_id=HG002_chrY_T0000433;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000433;transcript_name=HG002_chrY_T0000433;gene_name=TTTY7;ID=intron:HG002_chrY_T0000433:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6114925	6115058	.	+	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1,ENST00000735961.1;transcript_id=HG002_chrY_T0000433;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000433;transcript_name=HG002_chrY_T0000433;gene_name=TTTY7;ID=exon:HG002_chrY_T0000433:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6115059	6115454	.	+	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1,ENST00000735961.1;transcript_id=HG002_chrY_T0000433;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000433;transcript_name=HG002_chrY_T0000433;gene_name=TTTY7;ID=intron:HG002_chrY_T0000433:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6115455	6115561	.	+	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1,ENST00000735961.1;transcript_id=HG002_chrY_T0000433;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000433;transcript_name=HG002_chrY_T0000433;gene_name=TTTY7;ID=exon:HG002_chrY_T0000433:2;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6115562	6118477	.	+	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1,ENST00000735961.1;transcript_id=HG002_chrY_T0000433;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000433;transcript_name=HG002_chrY_T0000433;gene_name=TTTY7;ID=intron:HG002_chrY_T0000433:2;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6118478	6118647	.	+	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1,ENST00000735961.1;transcript_id=HG002_chrY_T0000433;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000433;transcript_name=HG002_chrY_T0000433;gene_name=TTTY7;ID=exon:HG002_chrY_T0000433:3;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6111301	6112955	1000	+	.	source_transcript=ENST00000735968.1;source_transcript_name=TTTY7-219;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735968.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735968.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735968.1,ENST00000735968.1;transcript_id=HG002_chrY_T0000434;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_G0000102;transcript_name=HG002_chrY_T0000434;gene_name=TTTY7;ID=HG002_chrY_T0000434;Name=TTTY7
HG002_chrY	CAT	exon	6111301	6111587	.	+	.	source_transcript=ENST00000735968.1;source_transcript_name=TTTY7-219;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735968.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735968.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735968.1,ENST00000735968.1;transcript_id=HG002_chrY_T0000434;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000434;transcript_name=HG002_chrY_T0000434;gene_name=TTTY7;ID=exon:HG002_chrY_T0000434:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6111588	6112711	.	+	.	source_transcript=ENST00000735968.1;source_transcript_name=TTTY7-219;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735968.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735968.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735968.1,ENST00000735968.1;transcript_id=HG002_chrY_T0000434;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000434;transcript_name=HG002_chrY_T0000434;gene_name=TTTY7;ID=intron:HG002_chrY_T0000434:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6112712	6112955	.	+	.	source_transcript=ENST00000735968.1;source_transcript_name=TTTY7-219;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735968.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735968.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735968.1,ENST00000735968.1;transcript_id=HG002_chrY_T0000434;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000434;transcript_name=HG002_chrY_T0000434;gene_name=TTTY7;ID=exon:HG002_chrY_T0000434:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6111322	6125855	1000	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=HG002_chrY_T0000435;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_G0000102;transcript_name=HG002_chrY_T0000435;gene_name=TTTY7;ID=HG002_chrY_T0000435;Name=TTTY7
HG002_chrY	CAT	exon	6111322	6111587	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=HG002_chrY_T0000435;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000435;transcript_name=HG002_chrY_T0000435;gene_name=TTTY7;ID=exon:HG002_chrY_T0000435:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6111588	6118477	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=HG002_chrY_T0000435;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000435;transcript_name=HG002_chrY_T0000435;gene_name=TTTY7;ID=intron:HG002_chrY_T0000435:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6118478	6118559	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=HG002_chrY_T0000435;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000435;transcript_name=HG002_chrY_T0000435;gene_name=TTTY7;ID=exon:HG002_chrY_T0000435:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6118560	6120866	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=HG002_chrY_T0000435;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000435;transcript_name=HG002_chrY_T0000435;gene_name=TTTY7;ID=intron:HG002_chrY_T0000435:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6120867	6120941	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=HG002_chrY_T0000435;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000435;transcript_name=HG002_chrY_T0000435;gene_name=TTTY7;ID=exon:HG002_chrY_T0000435:2;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6120942	6124023	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=HG002_chrY_T0000435;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000435;transcript_name=HG002_chrY_T0000435;gene_name=TTTY7;ID=intron:HG002_chrY_T0000435:2;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6124024	6124137	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=HG002_chrY_T0000435;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000435;transcript_name=HG002_chrY_T0000435;gene_name=TTTY7;ID=exon:HG002_chrY_T0000435:3;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6124138	6125612	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=HG002_chrY_T0000435;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000435;transcript_name=HG002_chrY_T0000435;gene_name=TTTY7;ID=intron:HG002_chrY_T0000435:3;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6125613	6125855	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=HG002_chrY_T0000435;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000435;transcript_name=HG002_chrY_T0000435;gene_name=TTTY7;ID=exon:HG002_chrY_T0000435:4;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6111322	6118643	1000	+	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1,ENST00000735963.1;transcript_id=HG002_chrY_T0000436;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_G0000102;transcript_name=HG002_chrY_T0000436;gene_name=TTTY7;ID=HG002_chrY_T0000436;Name=TTTY7
HG002_chrY	CAT	exon	6111322	6111587	.	+	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1,ENST00000735963.1;transcript_id=HG002_chrY_T0000436;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000436;transcript_name=HG002_chrY_T0000436;gene_name=TTTY7;ID=exon:HG002_chrY_T0000436:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6111588	6112711	.	+	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1,ENST00000735963.1;transcript_id=HG002_chrY_T0000436;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000436;transcript_name=HG002_chrY_T0000436;gene_name=TTTY7;ID=intron:HG002_chrY_T0000436:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6112712	6112869	.	+	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1,ENST00000735963.1;transcript_id=HG002_chrY_T0000436;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000436;transcript_name=HG002_chrY_T0000436;gene_name=TTTY7;ID=exon:HG002_chrY_T0000436:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6112870	6114924	.	+	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1,ENST00000735963.1;transcript_id=HG002_chrY_T0000436;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000436;transcript_name=HG002_chrY_T0000436;gene_name=TTTY7;ID=intron:HG002_chrY_T0000436:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6114925	6115058	.	+	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1,ENST00000735963.1;transcript_id=HG002_chrY_T0000436;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000436;transcript_name=HG002_chrY_T0000436;gene_name=TTTY7;ID=exon:HG002_chrY_T0000436:2;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6115059	6118477	.	+	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1,ENST00000735963.1;transcript_id=HG002_chrY_T0000436;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000436;transcript_name=HG002_chrY_T0000436;gene_name=TTTY7;ID=intron:HG002_chrY_T0000436:2;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6118478	6118643	.	+	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1,ENST00000735963.1;transcript_id=HG002_chrY_T0000436;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000436;transcript_name=HG002_chrY_T0000436;gene_name=TTTY7;ID=exon:HG002_chrY_T0000436:3;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6113705	6118647	1000	+	.	source_transcript=ENST00000735964.1;source_transcript_name=TTTY7-215;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735964.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735964.1,ENST00000735964.1;transcript_id=HG002_chrY_T0000437;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_G0000102;transcript_name=HG002_chrY_T0000437;gene_name=TTTY7;ID=HG002_chrY_T0000437;Name=TTTY7
HG002_chrY	CAT	exon	6113705	6114004	.	+	.	source_transcript=ENST00000735964.1;source_transcript_name=TTTY7-215;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735964.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735964.1,ENST00000735964.1;transcript_id=HG002_chrY_T0000437;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000437;transcript_name=HG002_chrY_T0000437;gene_name=TTTY7;ID=exon:HG002_chrY_T0000437:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6114005	6118477	.	+	.	source_transcript=ENST00000735964.1;source_transcript_name=TTTY7-215;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735964.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735964.1,ENST00000735964.1;transcript_id=HG002_chrY_T0000437;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000437;transcript_name=HG002_chrY_T0000437;gene_name=TTTY7;ID=intron:HG002_chrY_T0000437:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6118478	6118647	.	+	.	source_transcript=ENST00000735964.1;source_transcript_name=TTTY7-215;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735964.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735964.1,ENST00000735964.1;transcript_id=HG002_chrY_T0000437;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000437;transcript_name=HG002_chrY_T0000437;gene_name=TTTY7;ID=exon:HG002_chrY_T0000437:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6117420	6125858	1000	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=HG002_chrY_T0000438;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_G0000102;transcript_name=HG002_chrY_T0000438;gene_name=TTTY7;ID=HG002_chrY_T0000438;Name=TTTY7
HG002_chrY	CAT	exon	6117420	6117456	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=HG002_chrY_T0000438;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000438;transcript_name=HG002_chrY_T0000438;gene_name=TTTY7;ID=exon:HG002_chrY_T0000438:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6117457	6118397	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=HG002_chrY_T0000438;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000438;transcript_name=HG002_chrY_T0000438;gene_name=TTTY7;ID=intron:HG002_chrY_T0000438:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6118398	6118559	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=HG002_chrY_T0000438;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000438;transcript_name=HG002_chrY_T0000438;gene_name=TTTY7;ID=exon:HG002_chrY_T0000438:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6118560	6120866	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=HG002_chrY_T0000438;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000438;transcript_name=HG002_chrY_T0000438;gene_name=TTTY7;ID=intron:HG002_chrY_T0000438:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6120867	6120941	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=HG002_chrY_T0000438;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000438;transcript_name=HG002_chrY_T0000438;gene_name=TTTY7;ID=exon:HG002_chrY_T0000438:2;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6120942	6121629	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=HG002_chrY_T0000438;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000438;transcript_name=HG002_chrY_T0000438;gene_name=TTTY7;ID=intron:HG002_chrY_T0000438:2;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6121630	6122106	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=HG002_chrY_T0000438;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000438;transcript_name=HG002_chrY_T0000438;gene_name=TTTY7;ID=exon:HG002_chrY_T0000438:3;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6122107	6124023	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=HG002_chrY_T0000438;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000438;transcript_name=HG002_chrY_T0000438;gene_name=TTTY7;ID=intron:HG002_chrY_T0000438:3;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6124024	6124137	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=HG002_chrY_T0000438;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000438;transcript_name=HG002_chrY_T0000438;gene_name=TTTY7;ID=exon:HG002_chrY_T0000438:4;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6124138	6125110	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=HG002_chrY_T0000438;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000438;transcript_name=HG002_chrY_T0000438;gene_name=TTTY7;ID=intron:HG002_chrY_T0000438:4;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6125111	6125366	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=HG002_chrY_T0000438;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000438;transcript_name=HG002_chrY_T0000438;gene_name=TTTY7;ID=exon:HG002_chrY_T0000438:5;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6125367	6125612	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=HG002_chrY_T0000438;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000438;transcript_name=HG002_chrY_T0000438;gene_name=TTTY7;ID=intron:HG002_chrY_T0000438:5;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6125613	6125858	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=HG002_chrY_T0000438;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000438;transcript_name=HG002_chrY_T0000438;gene_name=TTTY7;ID=exon:HG002_chrY_T0000438:6;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6117420	6125858	1000	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=HG002_chrY_T0000439;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_G0000102;transcript_name=HG002_chrY_T0000439;gene_name=TTTY7;ID=HG002_chrY_T0000439;Name=TTTY7
HG002_chrY	CAT	exon	6117420	6117456	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=HG002_chrY_T0000439;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000439;transcript_name=HG002_chrY_T0000439;gene_name=TTTY7;ID=exon:HG002_chrY_T0000439:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6117457	6118397	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=HG002_chrY_T0000439;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000439;transcript_name=HG002_chrY_T0000439;gene_name=TTTY7;ID=intron:HG002_chrY_T0000439:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6118398	6118559	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=HG002_chrY_T0000439;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000439;transcript_name=HG002_chrY_T0000439;gene_name=TTTY7;ID=exon:HG002_chrY_T0000439:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6118560	6120866	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=HG002_chrY_T0000439;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000439;transcript_name=HG002_chrY_T0000439;gene_name=TTTY7;ID=intron:HG002_chrY_T0000439:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6120867	6120941	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=HG002_chrY_T0000439;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000439;transcript_name=HG002_chrY_T0000439;gene_name=TTTY7;ID=exon:HG002_chrY_T0000439:2;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6120942	6121629	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=HG002_chrY_T0000439;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000439;transcript_name=HG002_chrY_T0000439;gene_name=TTTY7;ID=intron:HG002_chrY_T0000439:2;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6121630	6122106	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=HG002_chrY_T0000439;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000439;transcript_name=HG002_chrY_T0000439;gene_name=TTTY7;ID=exon:HG002_chrY_T0000439:3;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6122107	6124023	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=HG002_chrY_T0000439;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000439;transcript_name=HG002_chrY_T0000439;gene_name=TTTY7;ID=intron:HG002_chrY_T0000439:3;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6124024	6124137	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=HG002_chrY_T0000439;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000439;transcript_name=HG002_chrY_T0000439;gene_name=TTTY7;ID=exon:HG002_chrY_T0000439:4;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6124138	6125612	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=HG002_chrY_T0000439;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000439;transcript_name=HG002_chrY_T0000439;gene_name=TTTY7;ID=intron:HG002_chrY_T0000439:4;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6125613	6125858	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=HG002_chrY_T0000439;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000439;transcript_name=HG002_chrY_T0000439;gene_name=TTTY7;ID=exon:HG002_chrY_T0000439:5;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6121838	6125858	1000	+	.	source_transcript=ENST00000735965.1;source_transcript_name=TTTY7-216;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735965.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735965.1,ENST00000735965.1;transcript_id=HG002_chrY_T0000440;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_G0000102;transcript_name=HG002_chrY_T0000440;gene_name=TTTY7;ID=HG002_chrY_T0000440;Name=TTTY7
HG002_chrY	CAT	exon	6121838	6122106	.	+	.	source_transcript=ENST00000735965.1;source_transcript_name=TTTY7-216;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735965.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735965.1,ENST00000735965.1;transcript_id=HG002_chrY_T0000440;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000440;transcript_name=HG002_chrY_T0000440;gene_name=TTTY7;ID=exon:HG002_chrY_T0000440:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6122107	6125612	.	+	.	source_transcript=ENST00000735965.1;source_transcript_name=TTTY7-216;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735965.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735965.1,ENST00000735965.1;transcript_id=HG002_chrY_T0000440;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000440;transcript_name=HG002_chrY_T0000440;gene_name=TTTY7;ID=intron:HG002_chrY_T0000440:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6125613	6125858	.	+	.	source_transcript=ENST00000735965.1;source_transcript_name=TTTY7-216;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735965.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735965.1,ENST00000735965.1;transcript_id=HG002_chrY_T0000440;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000440;transcript_name=HG002_chrY_T0000440;gene_name=TTTY7;ID=exon:HG002_chrY_T0000440:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6121857	6125858	1000	+	.	source_transcript=ENST00000449828.1;source_transcript_name=TTTY7-203;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449828.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000449828.1,ENST00000449828.1;transcript_id=HG002_chrY_T0000441;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_G0000102;transcript_name=HG002_chrY_T0000441;gene_name=TTTY7;ID=HG002_chrY_T0000441;Name=TTTY7
HG002_chrY	CAT	exon	6121857	6122106	.	+	.	source_transcript=ENST00000449828.1;source_transcript_name=TTTY7-203;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449828.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000449828.1,ENST00000449828.1;transcript_id=HG002_chrY_T0000441;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000441;transcript_name=HG002_chrY_T0000441;gene_name=TTTY7;ID=exon:HG002_chrY_T0000441:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6122107	6123924	.	+	.	source_transcript=ENST00000449828.1;source_transcript_name=TTTY7-203;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449828.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000449828.1,ENST00000449828.1;transcript_id=HG002_chrY_T0000441;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000441;transcript_name=HG002_chrY_T0000441;gene_name=TTTY7;ID=intron:HG002_chrY_T0000441:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6123925	6124137	.	+	.	source_transcript=ENST00000449828.1;source_transcript_name=TTTY7-203;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449828.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000449828.1,ENST00000449828.1;transcript_id=HG002_chrY_T0000441;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000441;transcript_name=HG002_chrY_T0000441;gene_name=TTTY7;ID=exon:HG002_chrY_T0000441:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6124138	6125612	.	+	.	source_transcript=ENST00000449828.1;source_transcript_name=TTTY7-203;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449828.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000449828.1,ENST00000449828.1;transcript_id=HG002_chrY_T0000441;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000441;transcript_name=HG002_chrY_T0000441;gene_name=TTTY7;ID=intron:HG002_chrY_T0000441:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6125613	6125858	.	+	.	source_transcript=ENST00000449828.1;source_transcript_name=TTTY7-203;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449828.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000449828.1,ENST00000449828.1;transcript_id=HG002_chrY_T0000441;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000441;transcript_name=HG002_chrY_T0000441;gene_name=TTTY7;ID=exon:HG002_chrY_T0000441:2;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6123020	6125858	1000	+	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1,ENST00000735966.1;transcript_id=HG002_chrY_T0000442;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_G0000102;transcript_name=HG002_chrY_T0000442;gene_name=TTTY7;ID=HG002_chrY_T0000442;Name=TTTY7
HG002_chrY	CAT	exon	6123020	6123383	.	+	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1,ENST00000735966.1;transcript_id=HG002_chrY_T0000442;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000442;transcript_name=HG002_chrY_T0000442;gene_name=TTTY7;ID=exon:HG002_chrY_T0000442:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6123384	6124023	.	+	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1,ENST00000735966.1;transcript_id=HG002_chrY_T0000442;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000442;transcript_name=HG002_chrY_T0000442;gene_name=TTTY7;ID=intron:HG002_chrY_T0000442:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6124024	6124137	.	+	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1,ENST00000735966.1;transcript_id=HG002_chrY_T0000442;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000442;transcript_name=HG002_chrY_T0000442;gene_name=TTTY7;ID=exon:HG002_chrY_T0000442:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6124138	6125110	.	+	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1,ENST00000735966.1;transcript_id=HG002_chrY_T0000442;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000442;transcript_name=HG002_chrY_T0000442;gene_name=TTTY7;ID=intron:HG002_chrY_T0000442:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6125111	6125366	.	+	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1,ENST00000735966.1;transcript_id=HG002_chrY_T0000442;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000442;transcript_name=HG002_chrY_T0000442;gene_name=TTTY7;ID=exon:HG002_chrY_T0000442:2;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6125367	6125612	.	+	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1,ENST00000735966.1;transcript_id=HG002_chrY_T0000442;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000442;transcript_name=HG002_chrY_T0000442;gene_name=TTTY7;ID=intron:HG002_chrY_T0000442:2;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6125613	6125858	.	+	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1,ENST00000735966.1;transcript_id=HG002_chrY_T0000442;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000442;transcript_name=HG002_chrY_T0000442;gene_name=TTTY7;ID=exon:HG002_chrY_T0000442:3;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6123020	6125848	1000	+	.	source_transcript=ENST00000735967.1;source_transcript_name=TTTY7-218;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735967.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735967.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735967.1,ENST00000735967.1;transcript_id=HG002_chrY_T0000443;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_G0000102;transcript_name=HG002_chrY_T0000443;gene_name=TTTY7;ID=HG002_chrY_T0000443;Name=TTTY7
HG002_chrY	CAT	exon	6123020	6123383	.	+	.	source_transcript=ENST00000735967.1;source_transcript_name=TTTY7-218;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735967.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735967.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735967.1,ENST00000735967.1;transcript_id=HG002_chrY_T0000443;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000443;transcript_name=HG002_chrY_T0000443;gene_name=TTTY7;ID=exon:HG002_chrY_T0000443:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6123384	6124023	.	+	.	source_transcript=ENST00000735967.1;source_transcript_name=TTTY7-218;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735967.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735967.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735967.1,ENST00000735967.1;transcript_id=HG002_chrY_T0000443;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000443;transcript_name=HG002_chrY_T0000443;gene_name=TTTY7;ID=intron:HG002_chrY_T0000443:0;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6124024	6124137	.	+	.	source_transcript=ENST00000735967.1;source_transcript_name=TTTY7-218;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735967.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735967.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735967.1,ENST00000735967.1;transcript_id=HG002_chrY_T0000443;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000443;transcript_name=HG002_chrY_T0000443;gene_name=TTTY7;ID=exon:HG002_chrY_T0000443:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6124138	6125612	.	+	.	source_transcript=ENST00000735967.1;source_transcript_name=TTTY7-218;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735967.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735967.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735967.1,ENST00000735967.1;transcript_id=HG002_chrY_T0000443;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000443;transcript_name=HG002_chrY_T0000443;gene_name=TTTY7;ID=intron:HG002_chrY_T0000443:1;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6125613	6125848	.	+	.	source_transcript=ENST00000735967.1;source_transcript_name=TTTY7-218;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735967.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735967.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735967.1,ENST00000735967.1;transcript_id=HG002_chrY_T0000443;gene_id=HG002_chrY_G0000102;Parent=HG002_chrY_T0000443;transcript_name=HG002_chrY_T0000443;gene_name=TTTY7;ID=exon:HG002_chrY_T0000443:2;Name=TTTY7;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	6130336	6141639	.	-	.	source_gene_common_name=TTTY8B;source_gene=ENSG00000185700.11;alternative_source_transcripts=ENST00000736416.1,ENST00000736416.1;gene_id=HG002_chrY_G0000103;gene_biotype=lncRNA;gene_name=TTTY8B;gene_sources=liftoff;ID=HG002_chrY_G0000103;Name=TTTY8B
HG002_chrY	CAT	transcript	6130336	6141625	1000	-	.	source_transcript=ENST00000736416.1;source_transcript_name=TTTY8B-203;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736416.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736416.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736416.1,ENST00000736416.1;transcript_id=HG002_chrY_T0000444;gene_id=HG002_chrY_G0000103;Parent=HG002_chrY_G0000103;transcript_name=HG002_chrY_T0000444;gene_name=TTTY8B;ID=HG002_chrY_T0000444;Name=TTTY8B
HG002_chrY	CAT	exon	6130336	6131233	.	-	.	source_transcript=ENST00000736416.1;source_transcript_name=TTTY8B-203;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736416.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736416.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736416.1,ENST00000736416.1;transcript_id=HG002_chrY_T0000444;gene_id=HG002_chrY_G0000103;Parent=HG002_chrY_T0000444;transcript_name=HG002_chrY_T0000444;gene_name=TTTY8B;ID=exon:HG002_chrY_T0000444:0;Name=TTTY8B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6131234	6140760	.	-	.	source_transcript=ENST00000736416.1;source_transcript_name=TTTY8B-203;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736416.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736416.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736416.1,ENST00000736416.1;transcript_id=HG002_chrY_T0000444;gene_id=HG002_chrY_G0000103;Parent=HG002_chrY_T0000444;transcript_name=HG002_chrY_T0000444;gene_name=TTTY8B;ID=intron:HG002_chrY_T0000444:0;Name=TTTY8B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6140761	6140965	.	-	.	source_transcript=ENST00000736416.1;source_transcript_name=TTTY8B-203;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736416.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736416.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736416.1,ENST00000736416.1;transcript_id=HG002_chrY_T0000444;gene_id=HG002_chrY_G0000103;Parent=HG002_chrY_T0000444;transcript_name=HG002_chrY_T0000444;gene_name=TTTY8B;ID=exon:HG002_chrY_T0000444:1;Name=TTTY8B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6140966	6141442	.	-	.	source_transcript=ENST00000736416.1;source_transcript_name=TTTY8B-203;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736416.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736416.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736416.1,ENST00000736416.1;transcript_id=HG002_chrY_T0000444;gene_id=HG002_chrY_G0000103;Parent=HG002_chrY_T0000444;transcript_name=HG002_chrY_T0000444;gene_name=TTTY8B;ID=intron:HG002_chrY_T0000444:1;Name=TTTY8B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6141443	6141625	.	-	.	source_transcript=ENST00000736416.1;source_transcript_name=TTTY8B-203;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736416.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736416.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736416.1,ENST00000736416.1;transcript_id=HG002_chrY_T0000444;gene_id=HG002_chrY_G0000103;Parent=HG002_chrY_T0000444;transcript_name=HG002_chrY_T0000444;gene_name=TTTY8B;ID=exon:HG002_chrY_T0000444:2;Name=TTTY8B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6131013	6141639	1000	-	.	source_transcript=ENST00000736417.1;source_transcript_name=TTTY8B-204;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736417.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736417.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736417.1,ENST00000736417.1;transcript_id=HG002_chrY_T0000445;gene_id=HG002_chrY_G0000103;Parent=HG002_chrY_G0000103;transcript_name=HG002_chrY_T0000445;gene_name=TTTY8B;ID=HG002_chrY_T0000445;Name=TTTY8B
HG002_chrY	CAT	exon	6131013	6131233	.	-	.	source_transcript=ENST00000736417.1;source_transcript_name=TTTY8B-204;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736417.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736417.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736417.1,ENST00000736417.1;transcript_id=HG002_chrY_T0000445;gene_id=HG002_chrY_G0000103;Parent=HG002_chrY_T0000445;transcript_name=HG002_chrY_T0000445;gene_name=TTTY8B;ID=exon:HG002_chrY_T0000445:0;Name=TTTY8B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6131234	6140760	.	-	.	source_transcript=ENST00000736417.1;source_transcript_name=TTTY8B-204;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736417.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736417.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736417.1,ENST00000736417.1;transcript_id=HG002_chrY_T0000445;gene_id=HG002_chrY_G0000103;Parent=HG002_chrY_T0000445;transcript_name=HG002_chrY_T0000445;gene_name=TTTY8B;ID=intron:HG002_chrY_T0000445:0;Name=TTTY8B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6140761	6140965	.	-	.	source_transcript=ENST00000736417.1;source_transcript_name=TTTY8B-204;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736417.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736417.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736417.1,ENST00000736417.1;transcript_id=HG002_chrY_T0000445;gene_id=HG002_chrY_G0000103;Parent=HG002_chrY_T0000445;transcript_name=HG002_chrY_T0000445;gene_name=TTTY8B;ID=exon:HG002_chrY_T0000445:1;Name=TTTY8B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6140966	6141599	.	-	.	source_transcript=ENST00000736417.1;source_transcript_name=TTTY8B-204;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736417.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736417.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736417.1,ENST00000736417.1;transcript_id=HG002_chrY_T0000445;gene_id=HG002_chrY_G0000103;Parent=HG002_chrY_T0000445;transcript_name=HG002_chrY_T0000445;gene_name=TTTY8B;ID=intron:HG002_chrY_T0000445:1;Name=TTTY8B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6141600	6141639	.	-	.	source_transcript=ENST00000736417.1;source_transcript_name=TTTY8B-204;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736417.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736417.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736417.1,ENST00000736417.1;transcript_id=HG002_chrY_T0000445;gene_id=HG002_chrY_G0000103;Parent=HG002_chrY_T0000445;transcript_name=HG002_chrY_T0000445;gene_name=TTTY8B;ID=exon:HG002_chrY_T0000445:2;Name=TTTY8B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6138721	6141609	1000	-	.	source_transcript=ENST00000455570.6;source_transcript_name=TTTY8B-202;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455570.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000455570.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000455570.6,ENST00000455570.6;transcript_id=HG002_chrY_T0000446;gene_id=HG002_chrY_G0000103;Parent=HG002_chrY_G0000103;transcript_name=HG002_chrY_T0000446;gene_name=TTTY8B;ID=HG002_chrY_T0000446;Name=TTTY8B
HG002_chrY	CAT	exon	6138721	6138897	.	-	.	source_transcript=ENST00000455570.6;source_transcript_name=TTTY8B-202;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455570.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000455570.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000455570.6,ENST00000455570.6;transcript_id=HG002_chrY_T0000446;gene_id=HG002_chrY_G0000103;Parent=HG002_chrY_T0000446;transcript_name=HG002_chrY_T0000446;gene_name=TTTY8B;ID=exon:HG002_chrY_T0000446:0;Name=TTTY8B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6138898	6140760	.	-	.	source_transcript=ENST00000455570.6;source_transcript_name=TTTY8B-202;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455570.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000455570.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000455570.6,ENST00000455570.6;transcript_id=HG002_chrY_T0000446;gene_id=HG002_chrY_G0000103;Parent=HG002_chrY_T0000446;transcript_name=HG002_chrY_T0000446;gene_name=TTTY8B;ID=intron:HG002_chrY_T0000446:0;Name=TTTY8B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6140761	6140965	.	-	.	source_transcript=ENST00000455570.6;source_transcript_name=TTTY8B-202;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455570.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000455570.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000455570.6,ENST00000455570.6;transcript_id=HG002_chrY_T0000446;gene_id=HG002_chrY_G0000103;Parent=HG002_chrY_T0000446;transcript_name=HG002_chrY_T0000446;gene_name=TTTY8B;ID=exon:HG002_chrY_T0000446:1;Name=TTTY8B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6140966	6141442	.	-	.	source_transcript=ENST00000455570.6;source_transcript_name=TTTY8B-202;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455570.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000455570.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000455570.6,ENST00000455570.6;transcript_id=HG002_chrY_T0000446;gene_id=HG002_chrY_G0000103;Parent=HG002_chrY_T0000446;transcript_name=HG002_chrY_T0000446;gene_name=TTTY8B;ID=intron:HG002_chrY_T0000446:1;Name=TTTY8B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6141443	6141609	.	-	.	source_transcript=ENST00000455570.6;source_transcript_name=TTTY8B-202;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455570.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000455570.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000455570.6,ENST00000455570.6;transcript_id=HG002_chrY_T0000446;gene_id=HG002_chrY_G0000103;Parent=HG002_chrY_T0000446;transcript_name=HG002_chrY_T0000446;gene_name=TTTY8B;ID=exon:HG002_chrY_T0000446:2;Name=TTTY8B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6138979	6141603	1000	-	.	source_transcript=ENST00000328819.5;source_transcript_name=TTTY8B-201;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000328819.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000328819.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000328819.5,ENST00000328819.5;transcript_id=HG002_chrY_T0000447;gene_id=HG002_chrY_G0000103;Parent=HG002_chrY_G0000103;transcript_name=HG002_chrY_T0000447;gene_name=TTTY8B;ID=HG002_chrY_T0000447;Name=TTTY8B
HG002_chrY	CAT	exon	6138979	6139168	.	-	.	source_transcript=ENST00000328819.5;source_transcript_name=TTTY8B-201;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000328819.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000328819.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000328819.5,ENST00000328819.5;transcript_id=HG002_chrY_T0000447;gene_id=HG002_chrY_G0000103;Parent=HG002_chrY_T0000447;transcript_name=HG002_chrY_T0000447;gene_name=TTTY8B;ID=exon:HG002_chrY_T0000447:0;Name=TTTY8B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6139169	6140760	.	-	.	source_transcript=ENST00000328819.5;source_transcript_name=TTTY8B-201;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000328819.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000328819.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000328819.5,ENST00000328819.5;transcript_id=HG002_chrY_T0000447;gene_id=HG002_chrY_G0000103;Parent=HG002_chrY_T0000447;transcript_name=HG002_chrY_T0000447;gene_name=TTTY8B;ID=intron:HG002_chrY_T0000447:0;Name=TTTY8B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6140761	6140965	.	-	.	source_transcript=ENST00000328819.5;source_transcript_name=TTTY8B-201;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000328819.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000328819.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000328819.5,ENST00000328819.5;transcript_id=HG002_chrY_T0000447;gene_id=HG002_chrY_G0000103;Parent=HG002_chrY_T0000447;transcript_name=HG002_chrY_T0000447;gene_name=TTTY8B;ID=exon:HG002_chrY_T0000447:1;Name=TTTY8B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6140966	6141442	.	-	.	source_transcript=ENST00000328819.5;source_transcript_name=TTTY8B-201;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000328819.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000328819.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000328819.5,ENST00000328819.5;transcript_id=HG002_chrY_T0000447;gene_id=HG002_chrY_G0000103;Parent=HG002_chrY_T0000447;transcript_name=HG002_chrY_T0000447;gene_name=TTTY8B;ID=intron:HG002_chrY_T0000447:1;Name=TTTY8B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6141443	6141603	.	-	.	source_transcript=ENST00000328819.5;source_transcript_name=TTTY8B-201;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000328819.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000328819.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000328819.5,ENST00000328819.5;transcript_id=HG002_chrY_T0000447;gene_id=HG002_chrY_G0000103;Parent=HG002_chrY_T0000447;transcript_name=HG002_chrY_T0000447;gene_name=TTTY8B;ID=exon:HG002_chrY_T0000447:2;Name=TTTY8B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6138979	6141639	1000	-	.	source_transcript=ENST00000736418.1;source_transcript_name=TTTY8B-205;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736418.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736418.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736418.1,ENST00000736418.1;transcript_id=HG002_chrY_T0000448;gene_id=HG002_chrY_G0000103;Parent=HG002_chrY_G0000103;transcript_name=HG002_chrY_T0000448;gene_name=TTTY8B;ID=HG002_chrY_T0000448;Name=TTTY8B
HG002_chrY	CAT	exon	6138979	6139168	.	-	.	source_transcript=ENST00000736418.1;source_transcript_name=TTTY8B-205;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736418.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736418.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736418.1,ENST00000736418.1;transcript_id=HG002_chrY_T0000448;gene_id=HG002_chrY_G0000103;Parent=HG002_chrY_T0000448;transcript_name=HG002_chrY_T0000448;gene_name=TTTY8B;ID=exon:HG002_chrY_T0000448:0;Name=TTTY8B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6139169	6140760	.	-	.	source_transcript=ENST00000736418.1;source_transcript_name=TTTY8B-205;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736418.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736418.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736418.1,ENST00000736418.1;transcript_id=HG002_chrY_T0000448;gene_id=HG002_chrY_G0000103;Parent=HG002_chrY_T0000448;transcript_name=HG002_chrY_T0000448;gene_name=TTTY8B;ID=intron:HG002_chrY_T0000448:0;Name=TTTY8B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6140761	6140965	.	-	.	source_transcript=ENST00000736418.1;source_transcript_name=TTTY8B-205;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736418.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736418.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736418.1,ENST00000736418.1;transcript_id=HG002_chrY_T0000448;gene_id=HG002_chrY_G0000103;Parent=HG002_chrY_T0000448;transcript_name=HG002_chrY_T0000448;gene_name=TTTY8B;ID=exon:HG002_chrY_T0000448:1;Name=TTTY8B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6140966	6141599	.	-	.	source_transcript=ENST00000736418.1;source_transcript_name=TTTY8B-205;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736418.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736418.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736418.1,ENST00000736418.1;transcript_id=HG002_chrY_T0000448;gene_id=HG002_chrY_G0000103;Parent=HG002_chrY_T0000448;transcript_name=HG002_chrY_T0000448;gene_name=TTTY8B;ID=intron:HG002_chrY_T0000448:1;Name=TTTY8B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6141600	6141639	.	-	.	source_transcript=ENST00000736418.1;source_transcript_name=TTTY8B-205;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736418.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736418.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736418.1,ENST00000736418.1;transcript_id=HG002_chrY_T0000448;gene_id=HG002_chrY_G0000103;Parent=HG002_chrY_T0000448;transcript_name=HG002_chrY_T0000448;gene_name=TTTY8B;ID=exon:HG002_chrY_T0000448:2;Name=TTTY8B;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	6160929	6164710	.	-	.	source_gene_common_name=ENSG00000235895;source_gene=ENSG00000235895.1;alternative_source_transcripts=ENST00000425857.1,ENST00000425857.1;gene_id=HG002_chrY_G0000104;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000235895;gene_sources=liftoff;ID=HG002_chrY_G0000104;Name=ENSG00000235895
HG002_chrY	CAT	transcript	6160929	6164710	1000	-	.	source_transcript=ENST00000425857.1;source_transcript_name=ENST00000425857;source_gene=ENSG00000235895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425857.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425857.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235895;alternative_source_transcripts=ENST00000425857.1,ENST00000425857.1;transcript_id=HG002_chrY_T0000449;gene_id=HG002_chrY_G0000104;Parent=HG002_chrY_G0000104;transcript_name=HG002_chrY_T0000449;gene_name=ENSG00000235895;ID=HG002_chrY_T0000449;Name=ENSG00000235895
HG002_chrY	CAT	exon	6160929	6161024	.	-	.	source_transcript=ENST00000425857.1;source_transcript_name=ENST00000425857;source_gene=ENSG00000235895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425857.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425857.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235895;alternative_source_transcripts=ENST00000425857.1,ENST00000425857.1;transcript_id=HG002_chrY_T0000449;gene_id=HG002_chrY_G0000104;Parent=HG002_chrY_T0000449;transcript_name=HG002_chrY_T0000449;gene_name=ENSG00000235895;ID=exon:HG002_chrY_T0000449:0;Name=ENSG00000235895;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6161025	6164537	.	-	.	source_transcript=ENST00000425857.1;source_transcript_name=ENST00000425857;source_gene=ENSG00000235895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425857.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425857.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235895;alternative_source_transcripts=ENST00000425857.1,ENST00000425857.1;transcript_id=HG002_chrY_T0000449;gene_id=HG002_chrY_G0000104;Parent=HG002_chrY_T0000449;transcript_name=HG002_chrY_T0000449;gene_name=ENSG00000235895;ID=intron:HG002_chrY_T0000449:0;Name=ENSG00000235895;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6164538	6164710	.	-	.	source_transcript=ENST00000425857.1;source_transcript_name=ENST00000425857;source_gene=ENSG00000235895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425857.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425857.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235895;alternative_source_transcripts=ENST00000425857.1,ENST00000425857.1;transcript_id=HG002_chrY_T0000449;gene_id=HG002_chrY_G0000104;Parent=HG002_chrY_T0000449;transcript_name=HG002_chrY_T0000449;gene_name=ENSG00000235895;ID=exon:HG002_chrY_T0000449:1;Name=ENSG00000235895;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	6188416	6188883	.	+	.	source_gene_common_name=TSPY17P;source_gene=ENSG00000232620.1;alternative_source_transcripts=ENST00000450329.1,ENST00000450329.1;gene_id=HG002_chrY_G0000105;gene_biotype=unprocessed_pseudogene;gene_name=TSPY17P;gene_sources=liftoff;ID=HG002_chrY_G0000105;Name=TSPY17P
HG002_chrY	CAT	transcript	6188416	6188883	1000	+	.	source_transcript=ENST00000450329.1;source_transcript_name=TSPY17P-201;source_gene=ENSG00000232620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450329.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY17P;alternative_source_transcripts=ENST00000450329.1,ENST00000450329.1;transcript_id=HG002_chrY_T0000450;gene_id=HG002_chrY_G0000105;Parent=HG002_chrY_G0000105;transcript_name=HG002_chrY_T0000450;gene_name=TSPY17P;ID=HG002_chrY_T0000450;Name=TSPY17P
HG002_chrY	CAT	exon	6188416	6188883	.	+	.	source_transcript=ENST00000450329.1;source_transcript_name=TSPY17P-201;source_gene=ENSG00000232620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450329.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY17P;alternative_source_transcripts=ENST00000450329.1,ENST00000450329.1;transcript_id=HG002_chrY_T0000450;gene_id=HG002_chrY_G0000105;Parent=HG002_chrY_T0000450;transcript_name=HG002_chrY_T0000450;gene_name=TSPY17P;ID=exon:HG002_chrY_T0000450:0;Name=TSPY17P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	6371146	6371364	.	-	.	source_gene_common_name=SRIP3;source_gene=ENSG00000224953.1;alternative_source_transcripts=ENST00000413200.1,ENST00000413200.1;gene_id=HG002_chrY_G0000106;gene_biotype=processed_pseudogene;gene_name=SRIP3;gene_sources=liftoff;ID=HG002_chrY_G0000106;Name=SRIP3
HG002_chrY	CAT	transcript	6371146	6371364	1000	-	.	source_transcript=ENST00000413200.1;source_transcript_name=SRIP3-201;source_gene=ENSG00000224953.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224953.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413200.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRIP3;alternative_source_transcripts=ENST00000413200.1,ENST00000413200.1;transcript_id=HG002_chrY_T0000451;gene_id=HG002_chrY_G0000106;Parent=HG002_chrY_G0000106;transcript_name=HG002_chrY_T0000451;gene_name=SRIP3;ID=HG002_chrY_T0000451;Name=SRIP3
HG002_chrY	CAT	exon	6371146	6371364	.	-	.	source_transcript=ENST00000413200.1;source_transcript_name=SRIP3-201;source_gene=ENSG00000224953.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224953.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRIP3;alternative_source_transcripts=ENST00000413200.1,ENST00000413200.1;transcript_id=HG002_chrY_T0000451;gene_id=HG002_chrY_G0000106;Parent=HG002_chrY_T0000451;transcript_name=HG002_chrY_T0000451;gene_name=SRIP3;ID=exon:HG002_chrY_T0000451:0;Name=SRIP3;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	6441337	6441528	.	+	.	source_gene_common_name=ENSG00000274365;source_gene=ENSG00000274365.1;alternative_source_transcripts=ENST00000610687.1,ENST00000610687.1;gene_id=HG002_chrY_G0000107;gene_biotype=processed_pseudogene;gene_name=ENSG00000274365;gene_sources=liftoff;ID=HG002_chrY_G0000107;Name=ENSG00000274365
HG002_chrY	CAT	transcript	6441337	6441528	1000	+	.	source_transcript=ENST00000610687.1;source_transcript_name=ENST00000610687;source_gene=ENSG00000274365.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274365.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000610687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000610687.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274365;alternative_source_transcripts=ENST00000610687.1,ENST00000610687.1;transcript_id=HG002_chrY_T0000452;gene_id=HG002_chrY_G0000107;Parent=HG002_chrY_G0000107;transcript_name=HG002_chrY_T0000452;gene_name=ENSG00000274365;ID=HG002_chrY_T0000452;Name=ENSG00000274365
HG002_chrY	CAT	exon	6441337	6441528	.	+	.	source_transcript=ENST00000610687.1;source_transcript_name=ENST00000610687;source_gene=ENSG00000274365.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274365.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000610687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000610687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274365;alternative_source_transcripts=ENST00000610687.1,ENST00000610687.1;transcript_id=HG002_chrY_T0000452;gene_id=HG002_chrY_G0000107;Parent=HG002_chrY_T0000452;transcript_name=HG002_chrY_T0000452;gene_name=ENSG00000274365;ID=exon:HG002_chrY_T0000452:0;Name=ENSG00000274365;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	6489896	6490441	.	+	.	source_gene_common_name=GOT2P5;source_gene=ENSG00000233634.1;alternative_source_transcripts=ENST00000433995.1,ENST00000433995.1;gene_id=HG002_chrY_G0000108;gene_biotype=processed_pseudogene;gene_name=GOT2P5;gene_sources=liftoff;ID=HG002_chrY_G0000108;Name=GOT2P5
HG002_chrY	CAT	transcript	6489896	6490441	1000	+	.	source_transcript=ENST00000433995.1;source_transcript_name=GOT2P5-201;source_gene=ENSG00000233634.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233634.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000433995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433995.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOT2P5;alternative_source_transcripts=ENST00000433995.1,ENST00000433995.1;transcript_id=HG002_chrY_T0000453;gene_id=HG002_chrY_G0000108;Parent=HG002_chrY_G0000108;transcript_name=HG002_chrY_T0000453;gene_name=GOT2P5;ID=HG002_chrY_T0000453;Name=GOT2P5
HG002_chrY	CAT	exon	6489896	6490441	.	+	.	source_transcript=ENST00000433995.1;source_transcript_name=GOT2P5-201;source_gene=ENSG00000233634.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233634.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000433995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433995.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOT2P5;alternative_source_transcripts=ENST00000433995.1,ENST00000433995.1;transcript_id=HG002_chrY_T0000453;gene_id=HG002_chrY_G0000108;Parent=HG002_chrY_T0000453;transcript_name=HG002_chrY_T0000453;gene_name=GOT2P5;ID=exon:HG002_chrY_T0000453:0;Name=GOT2P5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	6518108	6563946	.	-	.	source_gene_common_name=AMELY;source_gene=ENSG00000099721.16;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;gene_id=HG002_chrY_G0000109;gene_biotype=protein_coding;gene_name=AMELY;gene_sources=liftoff;ID=HG002_chrY_G0000109;Name=AMELY
HG002_chrY	CAT	transcript	6518108	6563946	100	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG002_chrY_T0000454;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_G0000109;transcript_name=HG002_chrY_T0000454;gene_name=AMELY;ID=HG002_chrY_T0000454;Name=AMELY
HG002_chrY	CAT	exon	6518108	6518268	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG002_chrY_T0000454;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000454;transcript_name=HG002_chrY_T0000454;gene_name=AMELY;ID=exon:HG002_chrY_T0000454:0;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6518263	6518268	.	-	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG002_chrY_T0000454;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000454;transcript_name=HG002_chrY_T0000454;gene_name=AMELY;ID=CDS:HG002_chrY_T0000454:0;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	6518263	6518265	.	-	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG002_chrY_T0000454;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000454;transcript_name=HG002_chrY_T0000454;gene_name=AMELY;ID=stop_codon:HG002_chrY_T0000454;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6518269	6520227	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG002_chrY_T0000454;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000454;transcript_name=HG002_chrY_T0000454;gene_name=AMELY;ID=intron:HG002_chrY_T0000454:0;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6520228	6520653	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG002_chrY_T0000454;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000454;transcript_name=HG002_chrY_T0000454;gene_name=AMELY;ID=exon:HG002_chrY_T0000454:1;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6520228	6520653	.	-	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG002_chrY_T0000454;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000454;transcript_name=HG002_chrY_T0000454;gene_name=AMELY;ID=CDS:HG002_chrY_T0000454:1;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6520654	6520922	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG002_chrY_T0000454;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000454;transcript_name=HG002_chrY_T0000454;gene_name=AMELY;ID=intron:HG002_chrY_T0000454:1;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6520923	6520967	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG002_chrY_T0000454;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000454;transcript_name=HG002_chrY_T0000454;gene_name=AMELY;ID=exon:HG002_chrY_T0000454:2;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6520923	6520967	.	-	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG002_chrY_T0000454;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000454;transcript_name=HG002_chrY_T0000454;gene_name=AMELY;ID=CDS:HG002_chrY_T0000454:2;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6520968	6522197	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG002_chrY_T0000454;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000454;transcript_name=HG002_chrY_T0000454;gene_name=AMELY;ID=intron:HG002_chrY_T0000454:2;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6522198	6522245	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG002_chrY_T0000454;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000454;transcript_name=HG002_chrY_T0000454;gene_name=AMELY;ID=exon:HG002_chrY_T0000454:3;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6522198	6522245	.	-	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG002_chrY_T0000454;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000454;transcript_name=HG002_chrY_T0000454;gene_name=AMELY;ID=CDS:HG002_chrY_T0000454:3;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6522246	6524746	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG002_chrY_T0000454;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000454;transcript_name=HG002_chrY_T0000454;gene_name=AMELY;ID=intron:HG002_chrY_T0000454:3;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6524747	6524812	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG002_chrY_T0000454;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000454;transcript_name=HG002_chrY_T0000454;gene_name=AMELY;ID=exon:HG002_chrY_T0000454:4;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6524747	6524800	.	-	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG002_chrY_T0000454;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000454;transcript_name=HG002_chrY_T0000454;gene_name=AMELY;ID=CDS:HG002_chrY_T0000454:4;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	6524798	6524800	.	-	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG002_chrY_T0000454;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000454;transcript_name=HG002_chrY_T0000454;gene_name=AMELY;ID=start_codon:HG002_chrY_T0000454;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6524813	6526163	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG002_chrY_T0000454;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000454;transcript_name=HG002_chrY_T0000454;gene_name=AMELY;ID=intron:HG002_chrY_T0000454:4;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6526164	6526263	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG002_chrY_T0000454;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000454;transcript_name=HG002_chrY_T0000454;gene_name=AMELY;ID=exon:HG002_chrY_T0000454:5;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6526264	6563866	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG002_chrY_T0000454;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000454;transcript_name=HG002_chrY_T0000454;gene_name=AMELY;ID=intron:HG002_chrY_T0000454:5;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6563867	6563946	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG002_chrY_T0000454;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000454;transcript_name=HG002_chrY_T0000454;gene_name=AMELY;ID=exon:HG002_chrY_T0000454:6;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6518263	6524800	100	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG002_chrY_T0000455;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_G0000109;transcript_name=HG002_chrY_T0000455;gene_name=AMELY;ID=HG002_chrY_T0000455;Name=AMELY
HG002_chrY	CAT	exon	6518263	6518268	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG002_chrY_T0000455;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000455;transcript_name=HG002_chrY_T0000455;gene_name=AMELY;ID=exon:HG002_chrY_T0000455:0;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6518263	6518268	.	-	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG002_chrY_T0000455;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000455;transcript_name=HG002_chrY_T0000455;gene_name=AMELY;ID=CDS:HG002_chrY_T0000455:0;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	6518263	6518265	.	-	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG002_chrY_T0000455;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000455;transcript_name=HG002_chrY_T0000455;gene_name=AMELY;ID=stop_codon:HG002_chrY_T0000455;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6518269	6520227	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG002_chrY_T0000455;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000455;transcript_name=HG002_chrY_T0000455;gene_name=AMELY;ID=intron:HG002_chrY_T0000455:0;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6520228	6520653	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG002_chrY_T0000455;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000455;transcript_name=HG002_chrY_T0000455;gene_name=AMELY;ID=exon:HG002_chrY_T0000455:1;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6520228	6520653	.	-	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG002_chrY_T0000455;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000455;transcript_name=HG002_chrY_T0000455;gene_name=AMELY;ID=CDS:HG002_chrY_T0000455:1;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6520654	6520922	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG002_chrY_T0000455;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000455;transcript_name=HG002_chrY_T0000455;gene_name=AMELY;ID=intron:HG002_chrY_T0000455:1;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6520923	6520967	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG002_chrY_T0000455;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000455;transcript_name=HG002_chrY_T0000455;gene_name=AMELY;ID=exon:HG002_chrY_T0000455:2;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6520923	6520967	.	-	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG002_chrY_T0000455;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000455;transcript_name=HG002_chrY_T0000455;gene_name=AMELY;ID=CDS:HG002_chrY_T0000455:2;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6520968	6521058	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG002_chrY_T0000455;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000455;transcript_name=HG002_chrY_T0000455;gene_name=AMELY;ID=intron:HG002_chrY_T0000455:2;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6521059	6521100	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG002_chrY_T0000455;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000455;transcript_name=HG002_chrY_T0000455;gene_name=AMELY;ID=exon:HG002_chrY_T0000455:3;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6521059	6521100	.	-	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG002_chrY_T0000455;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000455;transcript_name=HG002_chrY_T0000455;gene_name=AMELY;ID=CDS:HG002_chrY_T0000455:3;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6521101	6522197	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG002_chrY_T0000455;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000455;transcript_name=HG002_chrY_T0000455;gene_name=AMELY;ID=intron:HG002_chrY_T0000455:3;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6522198	6522245	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG002_chrY_T0000455;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000455;transcript_name=HG002_chrY_T0000455;gene_name=AMELY;ID=exon:HG002_chrY_T0000455:4;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6522198	6522245	.	-	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG002_chrY_T0000455;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000455;transcript_name=HG002_chrY_T0000455;gene_name=AMELY;ID=CDS:HG002_chrY_T0000455:4;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6522246	6524746	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG002_chrY_T0000455;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000455;transcript_name=HG002_chrY_T0000455;gene_name=AMELY;ID=intron:HG002_chrY_T0000455:4;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6524747	6524800	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG002_chrY_T0000455;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000455;transcript_name=HG002_chrY_T0000455;gene_name=AMELY;ID=exon:HG002_chrY_T0000455:5;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6524747	6524800	.	-	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG002_chrY_T0000455;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000455;transcript_name=HG002_chrY_T0000455;gene_name=AMELY;ID=CDS:HG002_chrY_T0000455:5;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	6524798	6524800	.	-	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG002_chrY_T0000455;gene_id=HG002_chrY_G0000109;Parent=HG002_chrY_T0000455;transcript_name=HG002_chrY_T0000455;gene_name=AMELY;ID=start_codon:HG002_chrY_T0000455;Name=AMELY;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	6552946	6553566	.	+	.	source_gene_common_name=ATP5PFP1;source_gene=ENSG00000237701.1;gene_id=HG002_chrY_G0000110;gene_biotype=processed_pseudogene;gene_name=ATP5PFP1;gene_sources=liftoff,transMap;ID=HG002_chrY_G0000110;Name=ATP5PFP1
HG002_chrY	CAT	transcript	6552946	6553566	1000	+	.	source_transcript=ENST00000431631.1;source_transcript_name=ATP5PFP1-201;source_gene=ENSG00000237701.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237701.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431631.1;alignment_mode=transMap;normalized_transcript_id=ENST00000431631.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ATP5PFP1;transcript_id=HG002_chrY_T0000456;gene_id=HG002_chrY_G0000110;Parent=HG002_chrY_G0000110;transcript_name=HG002_chrY_T0000456;gene_name=ATP5PFP1;ID=HG002_chrY_T0000456;Name=ATP5PFP1
HG002_chrY	CAT	exon	6552946	6553041	.	+	.	source_transcript=ENST00000431631.1;source_transcript_name=ATP5PFP1-201;source_gene=ENSG00000237701.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237701.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431631.1;alignment_mode=transMap;normalized_transcript_id=ENST00000431631.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ATP5PFP1;transcript_id=HG002_chrY_T0000456;gene_id=HG002_chrY_G0000110;Parent=HG002_chrY_T0000456;transcript_name=HG002_chrY_T0000456;gene_name=ATP5PFP1;ID=exon:HG002_chrY_T0000456:0;Name=ATP5PFP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6553042	6553340	.	+	.	source_transcript=ENST00000431631.1;source_transcript_name=ATP5PFP1-201;source_gene=ENSG00000237701.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237701.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431631.1;alignment_mode=transMap;normalized_transcript_id=ENST00000431631.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ATP5PFP1;transcript_id=HG002_chrY_T0000456;gene_id=HG002_chrY_G0000110;Parent=HG002_chrY_T0000456;transcript_name=HG002_chrY_T0000456;gene_name=ATP5PFP1;ID=intron:HG002_chrY_T0000456:0;Name=ATP5PFP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6553341	6553566	.	+	.	source_transcript=ENST00000431631.1;source_transcript_name=ATP5PFP1-201;source_gene=ENSG00000237701.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237701.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431631.1;alignment_mode=transMap;normalized_transcript_id=ENST00000431631.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ATP5PFP1;transcript_id=HG002_chrY_T0000456;gene_id=HG002_chrY_G0000110;Parent=HG002_chrY_T0000456;transcript_name=HG002_chrY_T0000456;gene_name=ATP5PFP1;ID=exon:HG002_chrY_T0000456:1;Name=ATP5PFP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6552946	6553566	1000	+	.	source_transcript=ENST00000431631.1;source_transcript_name=ATP5PFP1-201;source_gene=ENSG00000237701.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237701.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431631.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431631.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ATP5PFP1;alternative_source_transcripts=ENST00000431631.1;transcript_id=HG002_chrY_T0000457;gene_id=HG002_chrY_G0000110;Parent=HG002_chrY_G0000110;transcript_name=HG002_chrY_T0000457;gene_name=ATP5PFP1;ID=HG002_chrY_T0000457;Name=ATP5PFP1
HG002_chrY	CAT	exon	6552946	6553042	.	+	.	source_transcript=ENST00000431631.1;source_transcript_name=ATP5PFP1-201;source_gene=ENSG00000237701.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237701.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431631.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431631.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ATP5PFP1;alternative_source_transcripts=ENST00000431631.1;transcript_id=HG002_chrY_T0000457;gene_id=HG002_chrY_G0000110;Parent=HG002_chrY_T0000457;transcript_name=HG002_chrY_T0000457;gene_name=ATP5PFP1;ID=exon:HG002_chrY_T0000457:0;Name=ATP5PFP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6553043	6553340	.	+	.	source_transcript=ENST00000431631.1;source_transcript_name=ATP5PFP1-201;source_gene=ENSG00000237701.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237701.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431631.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431631.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ATP5PFP1;alternative_source_transcripts=ENST00000431631.1;transcript_id=HG002_chrY_T0000457;gene_id=HG002_chrY_G0000110;Parent=HG002_chrY_T0000457;transcript_name=HG002_chrY_T0000457;gene_name=ATP5PFP1;ID=intron:HG002_chrY_T0000457:0;Name=ATP5PFP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6553341	6553566	.	+	.	source_transcript=ENST00000431631.1;source_transcript_name=ATP5PFP1-201;source_gene=ENSG00000237701.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237701.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431631.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431631.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ATP5PFP1;alternative_source_transcripts=ENST00000431631.1;transcript_id=HG002_chrY_T0000457;gene_id=HG002_chrY_G0000110;Parent=HG002_chrY_T0000457;transcript_name=HG002_chrY_T0000457;gene_name=ATP5PFP1;ID=exon:HG002_chrY_T0000457:1;Name=ATP5PFP1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	6562880	6754165	.	+	.	source_gene_common_name=TBL1Y;source_gene=ENSG00000092377.15;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;gene_id=HG002_chrY_G0000111;gene_biotype=protein_coding;gene_name=TBL1Y;gene_sources=liftoff;ID=HG002_chrY_G0000111;Name=TBL1Y
HG002_chrY	CAT	transcript	6562880	6743878	100	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_G0000111;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=HG002_chrY_T0000458;Name=TBL1Y
HG002_chrY	CAT	exon	6562880	6563176	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000458:0;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6563177	6564281	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000458:0;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6564282	6564366	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000458:1;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6564367	6630405	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000458:1;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6630406	6630436	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000458:2;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6630437	6673645	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000458:2;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6673646	6673734	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000458:3;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6673735	6677230	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000458:3;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6677231	6677338	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000458:4;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6677281	6677338	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000458:0;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	6677281	6677283	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=start_codon:HG002_chrY_T0000458;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6677339	6695174	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000458:4;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6695175	6695320	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000458:5;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6695175	6695320	.	+	2	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000458:1;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6695321	6716093	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000458:5;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6716094	6716346	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000458:6;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6716094	6716346	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000458:2;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6716347	6722392	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000458:6;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6722393	6722525	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000458:7;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6722393	6722525	.	+	2	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000458:3;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6722526	6722916	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000458:7;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6722917	6723058	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000458:8;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6722917	6723058	.	+	1	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000458:4;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6723059	6723756	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000458:8;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6723757	6723820	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000458:9;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6723757	6723820	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000458:5;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6723821	6723929	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000458:9;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6723930	6724027	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000458:10;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6723930	6724027	.	+	2	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000458:6;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6724028	6726756	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000458:10;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6726757	6726817	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000458:11;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6726757	6726817	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000458:7;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6726818	6732928	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000458:11;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6732929	6733050	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000458:12;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6732929	6733050	.	+	2	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000458:8;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6733051	6738092	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000458:12;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6738093	6738167	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000458:13;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6738093	6738167	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000458:9;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6738168	6738484	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000458:13;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6738485	6738612	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000458:14;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6738485	6738612	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000458:10;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6738613	6739461	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000458:14;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6739462	6739627	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000458:15;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6739462	6739627	.	+	1	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000458:11;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6739628	6742283	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000458:15;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6742284	6742385	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000458:16;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6742284	6742385	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000458:12;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6742386	6743666	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000458:16;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6743667	6743878	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000458:17;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6743667	6743687	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000458:13;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	6743685	6743687	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG002_chrY_T0000458;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000458;transcript_name=HG002_chrY_T0000458;gene_name=TBL1Y;ID=stop_codon:HG002_chrY_T0000458;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6562880	6743878	100	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_G0000111;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=HG002_chrY_T0000459;Name=TBL1Y
HG002_chrY	CAT	exon	6562880	6563176	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000459:0;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6563177	6564281	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000459:0;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6564282	6564366	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000459:1;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6564367	6648001	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000459:1;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6648002	6648096	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000459:2;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6648097	6673645	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000459:2;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6673646	6673734	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000459:3;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6673735	6677230	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000459:3;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6677231	6677338	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000459:4;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6677281	6677338	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000459:0;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	6677281	6677283	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=start_codon:HG002_chrY_T0000459;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6677339	6695174	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000459:4;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6695175	6695320	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000459:5;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6695175	6695320	.	+	2	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000459:1;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6695321	6716093	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000459:5;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6716094	6716346	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000459:6;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6716094	6716346	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000459:2;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6716347	6722392	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000459:6;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6722393	6722525	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000459:7;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6722393	6722525	.	+	2	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000459:3;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6722526	6722916	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000459:7;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6722917	6723058	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000459:8;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6722917	6723058	.	+	1	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000459:4;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6723059	6723756	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000459:8;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6723757	6723820	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000459:9;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6723757	6723820	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000459:5;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6723821	6723929	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000459:9;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6723930	6724027	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000459:10;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6723930	6724027	.	+	2	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000459:6;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6724028	6726756	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000459:10;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6726757	6726817	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000459:11;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6726757	6726817	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000459:7;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6726818	6732928	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000459:11;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6732929	6733050	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000459:12;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6732929	6733050	.	+	2	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000459:8;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6733051	6738092	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000459:12;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6738093	6738167	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000459:13;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6738093	6738167	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000459:9;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6738168	6738484	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000459:13;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6738485	6738612	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000459:14;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6738485	6738612	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000459:10;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6738613	6739461	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000459:14;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6739462	6739627	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000459:15;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6739462	6739627	.	+	1	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000459:11;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6739628	6742283	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000459:15;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6742284	6742385	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000459:16;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6742284	6742385	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000459:12;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6742386	6743666	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000459:16;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6743667	6743878	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000459:17;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6743667	6743687	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000459:13;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	6743685	6743687	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG002_chrY_T0000459;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000459;transcript_name=HG002_chrY_T0000459;gene_name=TBL1Y;ID=stop_codon:HG002_chrY_T0000459;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6562891	6743878	100	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_G0000111;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=HG002_chrY_T0000460;Name=TBL1Y
HG002_chrY	CAT	exon	6562891	6563176	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000460:0;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6563177	6564281	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000460:0;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6564282	6564366	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000460:1;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6564367	6630405	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000460:1;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6630406	6630436	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000460:2;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6630437	6648001	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000460:2;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6648002	6648096	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000460:3;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6648097	6673645	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000460:3;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6673646	6673734	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000460:4;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6673735	6677230	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000460:4;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6677231	6677338	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000460:5;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6677281	6677338	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000460:0;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	6677281	6677283	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=start_codon:HG002_chrY_T0000460;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6677339	6695174	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000460:5;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6695175	6695320	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000460:6;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6695175	6695320	.	+	2	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000460:1;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6695321	6716093	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000460:6;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6716094	6716346	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000460:7;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6716094	6716346	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000460:2;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6716347	6722392	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000460:7;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6722393	6722525	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000460:8;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6722393	6722525	.	+	2	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000460:3;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6722526	6722916	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000460:8;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6722917	6723058	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000460:9;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6722917	6723058	.	+	1	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000460:4;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6723059	6723756	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000460:9;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6723757	6723820	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000460:10;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6723757	6723820	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000460:5;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6723821	6723929	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000460:10;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6723930	6724027	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000460:11;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6723930	6724027	.	+	2	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000460:6;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6724028	6726756	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000460:11;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6726757	6726817	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000460:12;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6726757	6726817	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000460:7;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6726818	6732928	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000460:12;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6732929	6733050	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000460:13;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6732929	6733050	.	+	2	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000460:8;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6733051	6738092	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000460:13;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6738093	6738167	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000460:14;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6738093	6738167	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000460:9;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6738168	6738484	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000460:14;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6738485	6738612	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000460:15;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6738485	6738612	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000460:10;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6738613	6739461	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000460:15;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6739462	6739627	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000460:16;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6739462	6739627	.	+	1	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000460:11;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6739628	6742283	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000460:16;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6742284	6742385	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000460:17;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6742284	6742385	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000460:12;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6742386	6743666	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000460:17;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6743667	6743878	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000460:18;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6743667	6743687	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000460:13;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	6743685	6743687	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG002_chrY_T0000460;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000460;transcript_name=HG002_chrY_T0000460;gene_name=TBL1Y;ID=stop_codon:HG002_chrY_T0000460;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6738576	6754165	100	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG002_chrY_T0000462;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_G0000111;transcript_name=HG002_chrY_T0000462;gene_name=TBL1Y;ID=HG002_chrY_T0000462;Name=TBL1Y
HG002_chrY	CAT	exon	6738576	6738612	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG002_chrY_T0000462;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000462;transcript_name=HG002_chrY_T0000462;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000462:0;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6738576	6738612	.	+	2	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG002_chrY_T0000462;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000462;transcript_name=HG002_chrY_T0000462;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000462:0;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6738613	6739461	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG002_chrY_T0000462;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000462;transcript_name=HG002_chrY_T0000462;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000462:0;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6739462	6739627	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG002_chrY_T0000462;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000462;transcript_name=HG002_chrY_T0000462;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000462:1;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6739462	6739627	.	+	1	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG002_chrY_T0000462;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000462;transcript_name=HG002_chrY_T0000462;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000462:1;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6739628	6742283	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG002_chrY_T0000462;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000462;transcript_name=HG002_chrY_T0000462;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000462:1;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6742284	6742385	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG002_chrY_T0000462;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000462;transcript_name=HG002_chrY_T0000462;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000462:2;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6742284	6742385	.	+	0	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG002_chrY_T0000462;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000462;transcript_name=HG002_chrY_T0000462;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000462:2;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6742386	6752979	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG002_chrY_T0000462;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000462;transcript_name=HG002_chrY_T0000462;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000462:2;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6752980	6753045	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG002_chrY_T0000462;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000462;transcript_name=HG002_chrY_T0000462;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000462:3;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6752980	6753045	.	+	0	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG002_chrY_T0000462;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000462;transcript_name=HG002_chrY_T0000462;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000462:3;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6753046	6754013	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG002_chrY_T0000462;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000462;transcript_name=HG002_chrY_T0000462;gene_name=TBL1Y;ID=intron:HG002_chrY_T0000462:3;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6754014	6754165	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG002_chrY_T0000462;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000462;transcript_name=HG002_chrY_T0000462;gene_name=TBL1Y;ID=exon:HG002_chrY_T0000462:4;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	6754014	6754061	.	+	0	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG002_chrY_T0000462;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000462;transcript_name=HG002_chrY_T0000462;gene_name=TBL1Y;ID=CDS:HG002_chrY_T0000462:4;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	6754059	6754061	.	+	0	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG002_chrY_T0000462;gene_id=HG002_chrY_G0000111;Parent=HG002_chrY_T0000462;transcript_name=HG002_chrY_T0000462;gene_name=TBL1Y;ID=stop_codon:HG002_chrY_T0000462;Name=TBL1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	6570876	6572985	.	+	.	source_gene_common_name=ENSG00000273906;source_gene=ENSG00000273906.1;alternative_source_transcripts=ENST00000620503.1,ENST00000620503.1;gene_id=HG002_chrY_G0000112;gene_biotype=lncRNA;gene_name=ENSG00000273906;gene_sources=liftoff;ID=HG002_chrY_G0000112;Name=ENSG00000273906
HG002_chrY	CAT	transcript	6570876	6572985	1000	+	.	source_transcript=ENST00000620503.1;source_transcript_name=ENST00000620503;source_gene=ENSG00000273906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000273906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000620503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000620503.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273906;alternative_source_transcripts=ENST00000620503.1,ENST00000620503.1;transcript_id=HG002_chrY_T0000461;gene_id=HG002_chrY_G0000112;Parent=HG002_chrY_G0000112;transcript_name=HG002_chrY_T0000461;gene_name=ENSG00000273906;ID=HG002_chrY_T0000461;Name=ENSG00000273906
HG002_chrY	CAT	exon	6570876	6572985	.	+	.	source_transcript=ENST00000620503.1;source_transcript_name=ENST00000620503;source_gene=ENSG00000273906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000273906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000620503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000620503.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273906;alternative_source_transcripts=ENST00000620503.1,ENST00000620503.1;transcript_id=HG002_chrY_T0000461;gene_id=HG002_chrY_G0000112;Parent=HG002_chrY_T0000461;transcript_name=HG002_chrY_T0000461;gene_name=ENSG00000273906;ID=exon:HG002_chrY_T0000461:0;Name=ENSG00000273906;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	6752264	6829994	.	-	.	source_gene_common_name=ENSG00000309393;source_gene=ENSG00000309393.1;gene_id=HG002_chrY_G0000113;gene_biotype=lncRNA;gene_name=ENSG00000309393;gene_sources=liftoff;ID=HG002_chrY_G0000113;Name=ENSG00000309393
HG002_chrY	CAT	transcript	6752264	6830004	1000	-	.	source_transcript=ENST00000840710.1;source_transcript_name=ENST00000840710;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840710.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG002_chrY_T0000463;gene_id=HG002_chrY_G0000113;Parent=HG002_chrY_G0000113;transcript_name=HG002_chrY_T0000463;gene_name=ENSG00000309393;ID=HG002_chrY_T0000463;Name=ENSG00000309393
HG002_chrY	CAT	exon	6752264	6753022	.	-	.	source_transcript=ENST00000840710.1;source_transcript_name=ENST00000840710;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG002_chrY_T0000463;gene_id=HG002_chrY_G0000113;Parent=HG002_chrY_T0000463;transcript_name=HG002_chrY_T0000463;gene_name=ENSG00000309393;ID=exon:HG002_chrY_T0000463:0;Name=ENSG00000309393;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6753023	6829851	.	-	.	source_transcript=ENST00000840710.1;source_transcript_name=ENST00000840710;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG002_chrY_T0000463;gene_id=HG002_chrY_G0000113;Parent=HG002_chrY_T0000463;transcript_name=HG002_chrY_T0000463;gene_name=ENSG00000309393;ID=intron:HG002_chrY_T0000463:0;Name=ENSG00000309393;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6829852	6830004	.	-	.	source_transcript=ENST00000840710.1;source_transcript_name=ENST00000840710;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG002_chrY_T0000463;gene_id=HG002_chrY_G0000113;Parent=HG002_chrY_T0000463;transcript_name=HG002_chrY_T0000463;gene_name=ENSG00000309393;ID=exon:HG002_chrY_T0000463:1;Name=ENSG00000309393;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6752591	6829994	1000	-	.	source_transcript=ENST00000840711.1;source_transcript_name=ENST00000840711;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840711.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG002_chrY_T0000464;gene_id=HG002_chrY_G0000113;Parent=HG002_chrY_G0000113;transcript_name=HG002_chrY_T0000464;gene_name=ENSG00000309393;ID=HG002_chrY_T0000464;Name=ENSG00000309393
HG002_chrY	CAT	exon	6752591	6753022	.	-	.	source_transcript=ENST00000840711.1;source_transcript_name=ENST00000840711;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG002_chrY_T0000464;gene_id=HG002_chrY_G0000113;Parent=HG002_chrY_T0000464;transcript_name=HG002_chrY_T0000464;gene_name=ENSG00000309393;ID=exon:HG002_chrY_T0000464:0;Name=ENSG00000309393;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6753023	6829891	.	-	.	source_transcript=ENST00000840711.1;source_transcript_name=ENST00000840711;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG002_chrY_T0000464;gene_id=HG002_chrY_G0000113;Parent=HG002_chrY_T0000464;transcript_name=HG002_chrY_T0000464;gene_name=ENSG00000309393;ID=intron:HG002_chrY_T0000464:0;Name=ENSG00000309393;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6829892	6829994	.	-	.	source_transcript=ENST00000840711.1;source_transcript_name=ENST00000840711;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG002_chrY_T0000464;gene_id=HG002_chrY_G0000113;Parent=HG002_chrY_T0000464;transcript_name=HG002_chrY_T0000464;gene_name=ENSG00000309393;ID=exon:HG002_chrY_T0000464:1;Name=ENSG00000309393;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6752592	6758916	1000	-	.	source_transcript=ENST00000840712.1;source_transcript_name=ENST00000840712;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840712.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG002_chrY_T0000465;gene_id=HG002_chrY_G0000113;Parent=HG002_chrY_G0000113;transcript_name=HG002_chrY_T0000465;gene_name=ENSG00000309393;ID=HG002_chrY_T0000465;Name=ENSG00000309393
HG002_chrY	CAT	exon	6752592	6753022	.	-	.	source_transcript=ENST00000840712.1;source_transcript_name=ENST00000840712;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG002_chrY_T0000465;gene_id=HG002_chrY_G0000113;Parent=HG002_chrY_T0000465;transcript_name=HG002_chrY_T0000465;gene_name=ENSG00000309393;ID=exon:HG002_chrY_T0000465:0;Name=ENSG00000309393;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6753023	6758751	.	-	.	source_transcript=ENST00000840712.1;source_transcript_name=ENST00000840712;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG002_chrY_T0000465;gene_id=HG002_chrY_G0000113;Parent=HG002_chrY_T0000465;transcript_name=HG002_chrY_T0000465;gene_name=ENSG00000309393;ID=intron:HG002_chrY_T0000465:0;Name=ENSG00000309393;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6758752	6758916	.	-	.	source_transcript=ENST00000840712.1;source_transcript_name=ENST00000840712;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG002_chrY_T0000465;gene_id=HG002_chrY_G0000113;Parent=HG002_chrY_T0000465;transcript_name=HG002_chrY_T0000465;gene_name=ENSG00000309393;ID=exon:HG002_chrY_T0000465:1;Name=ENSG00000309393;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	6752928	6758697	.	-	.	source_gene_common_name=GPR143YP;source_gene=ENSG00000232583.1;gene_id=HG002_chrY_G0000114;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=GPR143YP;gene_sources=liftoff;ID=HG002_chrY_G0000114;Name=GPR143YP
HG002_chrY	CAT	transcript	6752928	6758697	1000	-	.	source_transcript=ENST00000434155.1;source_transcript_name=GPR143YP-201;source_gene=ENSG00000232583.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232583.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434155.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPR143YP;transcript_id=HG002_chrY_T0000466;gene_id=HG002_chrY_G0000114;Parent=HG002_chrY_G0000114;transcript_name=HG002_chrY_T0000466;gene_name=GPR143YP;ID=HG002_chrY_T0000466;Name=GPR143YP
HG002_chrY	CAT	exon	6752928	6753022	.	-	.	source_transcript=ENST00000434155.1;source_transcript_name=GPR143YP-201;source_gene=ENSG00000232583.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232583.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPR143YP;transcript_id=HG002_chrY_T0000466;gene_id=HG002_chrY_G0000114;Parent=HG002_chrY_T0000466;transcript_name=HG002_chrY_T0000466;gene_name=GPR143YP;ID=exon:HG002_chrY_T0000466:0;Name=GPR143YP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6753023	6758587	.	-	.	source_transcript=ENST00000434155.1;source_transcript_name=GPR143YP-201;source_gene=ENSG00000232583.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232583.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPR143YP;transcript_id=HG002_chrY_T0000466;gene_id=HG002_chrY_G0000114;Parent=HG002_chrY_T0000466;transcript_name=HG002_chrY_T0000466;gene_name=GPR143YP;ID=intron:HG002_chrY_T0000466:0;Name=GPR143YP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6758588	6758697	.	-	.	source_transcript=ENST00000434155.1;source_transcript_name=GPR143YP-201;source_gene=ENSG00000232583.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232583.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPR143YP;transcript_id=HG002_chrY_T0000466;gene_id=HG002_chrY_G0000114;Parent=HG002_chrY_T0000466;transcript_name=HG002_chrY_T0000466;gene_name=GPR143YP;ID=exon:HG002_chrY_T0000466:1;Name=GPR143YP;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	6926162	7033734	.	+	.	source_gene_common_name=PRKY;source_gene=ENSG00000293442.2;gene_id=HG002_chrY_G0000115;gene_biotype=lncRNA;gene_name=PRKY;gene_sources=liftoff;ID=HG002_chrY_G0000115;Name=PRKY
HG002_chrY	CAT	transcript	6926162	7033734	1000	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000467;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_G0000115;transcript_name=HG002_chrY_T0000467;gene_name=PRKY;ID=HG002_chrY_T0000467;Name=PRKY
HG002_chrY	CAT	exon	6926162	6926668	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000467;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000467;transcript_name=HG002_chrY_T0000467;gene_name=PRKY;ID=exon:HG002_chrY_T0000467:0;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6926669	6956122	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000467;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000467;transcript_name=HG002_chrY_T0000467;gene_name=PRKY;ID=intron:HG002_chrY_T0000467:0;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6956123	6956291	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000467;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000467;transcript_name=HG002_chrY_T0000467;gene_name=PRKY;ID=exon:HG002_chrY_T0000467:1;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6956292	6978092	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000467;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000467;transcript_name=HG002_chrY_T0000467;gene_name=PRKY;ID=intron:HG002_chrY_T0000467:1;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6978093	6978356	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000467;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000467;transcript_name=HG002_chrY_T0000467;gene_name=PRKY;ID=exon:HG002_chrY_T0000467:2;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6978357	6993301	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000467;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000467;transcript_name=HG002_chrY_T0000467;gene_name=PRKY;ID=intron:HG002_chrY_T0000467:2;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6993302	6993421	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000467;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000467;transcript_name=HG002_chrY_T0000467;gene_name=PRKY;ID=exon:HG002_chrY_T0000467:3;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6993422	7008318	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000467;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000467;transcript_name=HG002_chrY_T0000467;gene_name=PRKY;ID=intron:HG002_chrY_T0000467:3;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7008319	7008414	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000467;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000467;transcript_name=HG002_chrY_T0000467;gene_name=PRKY;ID=exon:HG002_chrY_T0000467:4;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7008415	7019541	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000467;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000467;transcript_name=HG002_chrY_T0000467;gene_name=PRKY;ID=intron:HG002_chrY_T0000467:4;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7019542	7019619	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000467;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000467;transcript_name=HG002_chrY_T0000467;gene_name=PRKY;ID=exon:HG002_chrY_T0000467:5;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7019620	7023928	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000467;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000467;transcript_name=HG002_chrY_T0000467;gene_name=PRKY;ID=intron:HG002_chrY_T0000467:5;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7023929	7024075	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000467;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000467;transcript_name=HG002_chrY_T0000467;gene_name=PRKY;ID=exon:HG002_chrY_T0000467:6;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7024076	7027897	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000467;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000467;transcript_name=HG002_chrY_T0000467;gene_name=PRKY;ID=intron:HG002_chrY_T0000467:6;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7027898	7033734	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000467;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000467;transcript_name=HG002_chrY_T0000467;gene_name=PRKY;ID=exon:HG002_chrY_T0000467:7;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6926767	6942947	1000	+	.	source_transcript=ENST00000700775.2;source_transcript_name=PRKY-205;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700775.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700775.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000469;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_G0000115;transcript_name=HG002_chrY_T0000469;gene_name=PRKY;ID=HG002_chrY_T0000469;Name=PRKY
HG002_chrY	CAT	exon	6926767	6927255	.	+	.	source_transcript=ENST00000700775.2;source_transcript_name=PRKY-205;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700775.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700775.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000469;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000469;transcript_name=HG002_chrY_T0000469;gene_name=PRKY;ID=exon:HG002_chrY_T0000469:0;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6927256	6942704	.	+	.	source_transcript=ENST00000700775.2;source_transcript_name=PRKY-205;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700775.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700775.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000469;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000469;transcript_name=HG002_chrY_T0000469;gene_name=PRKY;ID=intron:HG002_chrY_T0000469:0;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6942705	6942947	.	+	.	source_transcript=ENST00000700775.2;source_transcript_name=PRKY-205;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700775.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700775.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000469;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000469;transcript_name=HG002_chrY_T0000469;gene_name=PRKY;ID=exon:HG002_chrY_T0000469:1;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6926964	6942947	1000	+	.	source_transcript=ENST00000836384.1;source_transcript_name=PRKY-212;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836384.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836384.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000470;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_G0000115;transcript_name=HG002_chrY_T0000470;gene_name=PRKY;ID=HG002_chrY_T0000470;Name=PRKY
HG002_chrY	CAT	exon	6926964	6927255	.	+	.	source_transcript=ENST00000836384.1;source_transcript_name=PRKY-212;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836384.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836384.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000470;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000470;transcript_name=HG002_chrY_T0000470;gene_name=PRKY;ID=exon:HG002_chrY_T0000470:0;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6927256	6937217	.	+	.	source_transcript=ENST00000836384.1;source_transcript_name=PRKY-212;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836384.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836384.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000470;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000470;transcript_name=HG002_chrY_T0000470;gene_name=PRKY;ID=intron:HG002_chrY_T0000470:0;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6937218	6937309	.	+	.	source_transcript=ENST00000836384.1;source_transcript_name=PRKY-212;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836384.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836384.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000470;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000470;transcript_name=HG002_chrY_T0000470;gene_name=PRKY;ID=exon:HG002_chrY_T0000470:1;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6937310	6942704	.	+	.	source_transcript=ENST00000836384.1;source_transcript_name=PRKY-212;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836384.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836384.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000470;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000470;transcript_name=HG002_chrY_T0000470;gene_name=PRKY;ID=intron:HG002_chrY_T0000470:1;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6942705	6942947	.	+	.	source_transcript=ENST00000836384.1;source_transcript_name=PRKY-212;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836384.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836384.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000470;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000470;transcript_name=HG002_chrY_T0000470;gene_name=PRKY;ID=exon:HG002_chrY_T0000470:2;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6927016	7028285	1000	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000471;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_G0000115;transcript_name=HG002_chrY_T0000471;gene_name=PRKY;ID=HG002_chrY_T0000471;Name=PRKY
HG002_chrY	CAT	exon	6927016	6927255	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000471;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000471;transcript_name=HG002_chrY_T0000471;gene_name=PRKY;ID=exon:HG002_chrY_T0000471:0;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6927256	6956122	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000471;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000471;transcript_name=HG002_chrY_T0000471;gene_name=PRKY;ID=intron:HG002_chrY_T0000471:0;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6956123	6956291	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000471;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000471;transcript_name=HG002_chrY_T0000471;gene_name=PRKY;ID=exon:HG002_chrY_T0000471:1;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6956292	6978092	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000471;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000471;transcript_name=HG002_chrY_T0000471;gene_name=PRKY;ID=intron:HG002_chrY_T0000471:1;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6978093	6978356	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000471;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000471;transcript_name=HG002_chrY_T0000471;gene_name=PRKY;ID=exon:HG002_chrY_T0000471:2;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6978357	6980213	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000471;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000471;transcript_name=HG002_chrY_T0000471;gene_name=PRKY;ID=intron:HG002_chrY_T0000471:2;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6980214	6980335	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000471;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000471;transcript_name=HG002_chrY_T0000471;gene_name=PRKY;ID=exon:HG002_chrY_T0000471:3;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6980336	6993301	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000471;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000471;transcript_name=HG002_chrY_T0000471;gene_name=PRKY;ID=intron:HG002_chrY_T0000471:3;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6993302	6993421	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000471;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000471;transcript_name=HG002_chrY_T0000471;gene_name=PRKY;ID=exon:HG002_chrY_T0000471:4;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6993422	7008318	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000471;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000471;transcript_name=HG002_chrY_T0000471;gene_name=PRKY;ID=intron:HG002_chrY_T0000471:4;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7008319	7008414	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000471;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000471;transcript_name=HG002_chrY_T0000471;gene_name=PRKY;ID=exon:HG002_chrY_T0000471:5;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7008415	7019541	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000471;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000471;transcript_name=HG002_chrY_T0000471;gene_name=PRKY;ID=intron:HG002_chrY_T0000471:5;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7019542	7019619	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000471;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000471;transcript_name=HG002_chrY_T0000471;gene_name=PRKY;ID=exon:HG002_chrY_T0000471:6;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7019620	7023928	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000471;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000471;transcript_name=HG002_chrY_T0000471;gene_name=PRKY;ID=intron:HG002_chrY_T0000471:6;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7023929	7024075	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000471;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000471;transcript_name=HG002_chrY_T0000471;gene_name=PRKY;ID=exon:HG002_chrY_T0000471:7;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7024076	7027897	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000471;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000471;transcript_name=HG002_chrY_T0000471;gene_name=PRKY;ID=intron:HG002_chrY_T0000471:7;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7027898	7028285	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000471;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000471;transcript_name=HG002_chrY_T0000471;gene_name=PRKY;ID=exon:HG002_chrY_T0000471:8;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6927108	6994402	1000	+	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000472;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_G0000115;transcript_name=HG002_chrY_T0000472;gene_name=PRKY;ID=HG002_chrY_T0000472;Name=PRKY
HG002_chrY	CAT	exon	6927108	6927255	.	+	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000472;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000472;transcript_name=HG002_chrY_T0000472;gene_name=PRKY;ID=exon:HG002_chrY_T0000472:0;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6927256	6956122	.	+	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000472;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000472;transcript_name=HG002_chrY_T0000472;gene_name=PRKY;ID=intron:HG002_chrY_T0000472:0;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6956123	6956291	.	+	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000472;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000472;transcript_name=HG002_chrY_T0000472;gene_name=PRKY;ID=exon:HG002_chrY_T0000472:1;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6956292	6978092	.	+	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000472;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000472;transcript_name=HG002_chrY_T0000472;gene_name=PRKY;ID=intron:HG002_chrY_T0000472:1;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6978093	6978356	.	+	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000472;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000472;transcript_name=HG002_chrY_T0000472;gene_name=PRKY;ID=exon:HG002_chrY_T0000472:2;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6978357	6993301	.	+	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000472;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000472;transcript_name=HG002_chrY_T0000472;gene_name=PRKY;ID=intron:HG002_chrY_T0000472:2;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6993302	6994402	.	+	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000472;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000472;transcript_name=HG002_chrY_T0000472;gene_name=PRKY;ID=exon:HG002_chrY_T0000472:3;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6927152	7028613	1000	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000473;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_G0000115;transcript_name=HG002_chrY_T0000473;gene_name=PRKY;ID=HG002_chrY_T0000473;Name=PRKY
HG002_chrY	CAT	exon	6927152	6927255	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000473;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000473;transcript_name=HG002_chrY_T0000473;gene_name=PRKY;ID=exon:HG002_chrY_T0000473:0;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6927256	6956122	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000473;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000473;transcript_name=HG002_chrY_T0000473;gene_name=PRKY;ID=intron:HG002_chrY_T0000473:0;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6956123	6956291	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000473;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000473;transcript_name=HG002_chrY_T0000473;gene_name=PRKY;ID=exon:HG002_chrY_T0000473:1;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6956292	6978092	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000473;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000473;transcript_name=HG002_chrY_T0000473;gene_name=PRKY;ID=intron:HG002_chrY_T0000473:1;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6978093	6978356	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000473;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000473;transcript_name=HG002_chrY_T0000473;gene_name=PRKY;ID=exon:HG002_chrY_T0000473:2;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6978357	7008318	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000473;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000473;transcript_name=HG002_chrY_T0000473;gene_name=PRKY;ID=intron:HG002_chrY_T0000473:2;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7008319	7008414	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000473;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000473;transcript_name=HG002_chrY_T0000473;gene_name=PRKY;ID=exon:HG002_chrY_T0000473:3;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7008415	7019541	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000473;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000473;transcript_name=HG002_chrY_T0000473;gene_name=PRKY;ID=intron:HG002_chrY_T0000473:3;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7019542	7019619	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000473;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000473;transcript_name=HG002_chrY_T0000473;gene_name=PRKY;ID=exon:HG002_chrY_T0000473:4;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7019620	7023928	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000473;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000473;transcript_name=HG002_chrY_T0000473;gene_name=PRKY;ID=intron:HG002_chrY_T0000473:4;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7023929	7024075	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000473;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000473;transcript_name=HG002_chrY_T0000473;gene_name=PRKY;ID=exon:HG002_chrY_T0000473:5;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7024076	7027897	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000473;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000473;transcript_name=HG002_chrY_T0000473;gene_name=PRKY;ID=intron:HG002_chrY_T0000473:5;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7027898	7028613	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000473;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000473;transcript_name=HG002_chrY_T0000473;gene_name=PRKY;ID=exon:HG002_chrY_T0000473:6;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6978254	6980590	1000	+	.	source_transcript=ENST00000495163.1;source_transcript_name=PRKY-203;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000495163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495163.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000475;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_G0000115;transcript_name=HG002_chrY_T0000475;gene_name=PRKY;ID=HG002_chrY_T0000475;Name=PRKY
HG002_chrY	CAT	exon	6978254	6978356	.	+	.	source_transcript=ENST00000495163.1;source_transcript_name=PRKY-203;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000495163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000475;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000475;transcript_name=HG002_chrY_T0000475;gene_name=PRKY;ID=exon:HG002_chrY_T0000475:0;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6978357	6980213	.	+	.	source_transcript=ENST00000495163.1;source_transcript_name=PRKY-203;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000495163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000475;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000475;transcript_name=HG002_chrY_T0000475;gene_name=PRKY;ID=intron:HG002_chrY_T0000475:0;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6980214	6980590	.	+	.	source_transcript=ENST00000495163.1;source_transcript_name=PRKY-203;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000495163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000475;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000475;transcript_name=HG002_chrY_T0000475;gene_name=PRKY;ID=exon:HG002_chrY_T0000475:1;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6985217	7008407	1000	+	.	source_transcript=ENST00000472666.1;source_transcript_name=PRKY-202;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000472666.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000476;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_G0000115;transcript_name=HG002_chrY_T0000476;gene_name=PRKY;ID=HG002_chrY_T0000476;Name=PRKY
HG002_chrY	CAT	exon	6985217	6985295	.	+	.	source_transcript=ENST00000472666.1;source_transcript_name=PRKY-202;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000472666.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000476;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000476;transcript_name=HG002_chrY_T0000476;gene_name=PRKY;ID=exon:HG002_chrY_T0000476:0;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6985296	6993301	.	+	.	source_transcript=ENST00000472666.1;source_transcript_name=PRKY-202;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000472666.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000476;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000476;transcript_name=HG002_chrY_T0000476;gene_name=PRKY;ID=intron:HG002_chrY_T0000476:0;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6993302	6993421	.	+	.	source_transcript=ENST00000472666.1;source_transcript_name=PRKY-202;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000472666.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000476;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000476;transcript_name=HG002_chrY_T0000476;gene_name=PRKY;ID=exon:HG002_chrY_T0000476:1;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6993422	7008318	.	+	.	source_transcript=ENST00000472666.1;source_transcript_name=PRKY-202;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000472666.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000476;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000476;transcript_name=HG002_chrY_T0000476;gene_name=PRKY;ID=intron:HG002_chrY_T0000476:1;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7008319	7008407	.	+	.	source_transcript=ENST00000472666.1;source_transcript_name=PRKY-202;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000472666.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000476;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000476;transcript_name=HG002_chrY_T0000476;gene_name=PRKY;ID=exon:HG002_chrY_T0000476:2;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6992147	7028285	1000	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000477;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_G0000115;transcript_name=HG002_chrY_T0000477;gene_name=PRKY;ID=HG002_chrY_T0000477;Name=PRKY
HG002_chrY	CAT	exon	6992147	6992209	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000477;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000477;transcript_name=HG002_chrY_T0000477;gene_name=PRKY;ID=exon:HG002_chrY_T0000477:0;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6992210	6993301	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000477;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000477;transcript_name=HG002_chrY_T0000477;gene_name=PRKY;ID=intron:HG002_chrY_T0000477:0;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6993302	6993421	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000477;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000477;transcript_name=HG002_chrY_T0000477;gene_name=PRKY;ID=exon:HG002_chrY_T0000477:1;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6993422	7008318	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000477;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000477;transcript_name=HG002_chrY_T0000477;gene_name=PRKY;ID=intron:HG002_chrY_T0000477:1;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7008319	7008414	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000477;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000477;transcript_name=HG002_chrY_T0000477;gene_name=PRKY;ID=exon:HG002_chrY_T0000477:2;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7008415	7019541	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000477;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000477;transcript_name=HG002_chrY_T0000477;gene_name=PRKY;ID=intron:HG002_chrY_T0000477:2;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7019542	7019619	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000477;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000477;transcript_name=HG002_chrY_T0000477;gene_name=PRKY;ID=exon:HG002_chrY_T0000477:3;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7019620	7023928	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000477;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000477;transcript_name=HG002_chrY_T0000477;gene_name=PRKY;ID=intron:HG002_chrY_T0000477:3;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7023929	7024075	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000477;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000477;transcript_name=HG002_chrY_T0000477;gene_name=PRKY;ID=exon:HG002_chrY_T0000477:4;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7024076	7027897	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000477;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000477;transcript_name=HG002_chrY_T0000477;gene_name=PRKY;ID=intron:HG002_chrY_T0000477:4;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7027898	7028285	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000477;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000477;transcript_name=HG002_chrY_T0000477;gene_name=PRKY;ID=exon:HG002_chrY_T0000477:5;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6992148	7025301	1000	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000478;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_G0000115;transcript_name=HG002_chrY_T0000478;gene_name=PRKY;ID=HG002_chrY_T0000478;Name=PRKY
HG002_chrY	CAT	exon	6992148	6992209	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000478;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000478;transcript_name=HG002_chrY_T0000478;gene_name=PRKY;ID=exon:HG002_chrY_T0000478:0;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6992210	6993301	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000478;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000478;transcript_name=HG002_chrY_T0000478;gene_name=PRKY;ID=intron:HG002_chrY_T0000478:0;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6993302	6993421	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000478;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000478;transcript_name=HG002_chrY_T0000478;gene_name=PRKY;ID=exon:HG002_chrY_T0000478:1;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6993422	7008318	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000478;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000478;transcript_name=HG002_chrY_T0000478;gene_name=PRKY;ID=intron:HG002_chrY_T0000478:1;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7008319	7008414	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000478;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000478;transcript_name=HG002_chrY_T0000478;gene_name=PRKY;ID=exon:HG002_chrY_T0000478:2;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7008415	7019541	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000478;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000478;transcript_name=HG002_chrY_T0000478;gene_name=PRKY;ID=intron:HG002_chrY_T0000478:2;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7019542	7019619	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000478;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000478;transcript_name=HG002_chrY_T0000478;gene_name=PRKY;ID=exon:HG002_chrY_T0000478:3;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7019620	7023928	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000478;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000478;transcript_name=HG002_chrY_T0000478;gene_name=PRKY;ID=intron:HG002_chrY_T0000478:3;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7023929	7024075	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000478;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000478;transcript_name=HG002_chrY_T0000478;gene_name=PRKY;ID=exon:HG002_chrY_T0000478:4;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7024076	7024917	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000478;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000478;transcript_name=HG002_chrY_T0000478;gene_name=PRKY;ID=intron:HG002_chrY_T0000478:4;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7024918	7025301	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000478;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000478;transcript_name=HG002_chrY_T0000478;gene_name=PRKY;ID=exon:HG002_chrY_T0000478:5;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	6992206	7028286	1000	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000479;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_G0000115;transcript_name=HG002_chrY_T0000479;gene_name=PRKY;ID=HG002_chrY_T0000479;Name=PRKY
HG002_chrY	CAT	exon	6992206	6992351	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000479;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000479;transcript_name=HG002_chrY_T0000479;gene_name=PRKY;ID=exon:HG002_chrY_T0000479:0;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6992352	6993301	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000479;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000479;transcript_name=HG002_chrY_T0000479;gene_name=PRKY;ID=intron:HG002_chrY_T0000479:0;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6993302	6993421	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000479;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000479;transcript_name=HG002_chrY_T0000479;gene_name=PRKY;ID=exon:HG002_chrY_T0000479:1;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6993422	7008318	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000479;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000479;transcript_name=HG002_chrY_T0000479;gene_name=PRKY;ID=intron:HG002_chrY_T0000479:1;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7008319	7008414	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000479;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000479;transcript_name=HG002_chrY_T0000479;gene_name=PRKY;ID=exon:HG002_chrY_T0000479:2;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7008415	7019541	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000479;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000479;transcript_name=HG002_chrY_T0000479;gene_name=PRKY;ID=intron:HG002_chrY_T0000479:2;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7019542	7019619	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000479;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000479;transcript_name=HG002_chrY_T0000479;gene_name=PRKY;ID=exon:HG002_chrY_T0000479:3;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7019620	7023928	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000479;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000479;transcript_name=HG002_chrY_T0000479;gene_name=PRKY;ID=intron:HG002_chrY_T0000479:3;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7023929	7024075	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000479;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000479;transcript_name=HG002_chrY_T0000479;gene_name=PRKY;ID=exon:HG002_chrY_T0000479:4;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7024076	7027897	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000479;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000479;transcript_name=HG002_chrY_T0000479;gene_name=PRKY;ID=intron:HG002_chrY_T0000479:4;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7027898	7028286	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000479;gene_id=HG002_chrY_G0000115;Parent=HG002_chrY_T0000479;transcript_name=HG002_chrY_T0000479;gene_name=PRKY;ID=exon:HG002_chrY_T0000479:5;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	6926503	7024054	.	+	.	source_gene_common_name=PRKY;source_gene=ENSG00000099725.15;gene_id=HG002_chrY_G0000116;gene_biotype=transcribed_unitary_pseudogene;gene_name=PRKY;gene_sources=liftoff;ID=HG002_chrY_G0000116;Name=PRKY
HG002_chrY	CAT	transcript	6926503	7024054	1000	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000468;gene_id=HG002_chrY_G0000116;Parent=HG002_chrY_G0000116;transcript_name=HG002_chrY_T0000468;gene_name=PRKY;ID=HG002_chrY_T0000468;Name=PRKY
HG002_chrY	CAT	exon	6926503	6926668	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000468;gene_id=HG002_chrY_G0000116;Parent=HG002_chrY_T0000468;transcript_name=HG002_chrY_T0000468;gene_name=PRKY;ID=exon:HG002_chrY_T0000468:0;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6926669	6956122	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000468;gene_id=HG002_chrY_G0000116;Parent=HG002_chrY_T0000468;transcript_name=HG002_chrY_T0000468;gene_name=PRKY;ID=intron:HG002_chrY_T0000468:0;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6956123	6956291	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000468;gene_id=HG002_chrY_G0000116;Parent=HG002_chrY_T0000468;transcript_name=HG002_chrY_T0000468;gene_name=PRKY;ID=exon:HG002_chrY_T0000468:1;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6956292	6978092	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000468;gene_id=HG002_chrY_G0000116;Parent=HG002_chrY_T0000468;transcript_name=HG002_chrY_T0000468;gene_name=PRKY;ID=intron:HG002_chrY_T0000468:1;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6978093	6978356	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000468;gene_id=HG002_chrY_G0000116;Parent=HG002_chrY_T0000468;transcript_name=HG002_chrY_T0000468;gene_name=PRKY;ID=exon:HG002_chrY_T0000468:2;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6978357	6993301	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000468;gene_id=HG002_chrY_G0000116;Parent=HG002_chrY_T0000468;transcript_name=HG002_chrY_T0000468;gene_name=PRKY;ID=intron:HG002_chrY_T0000468:2;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	6993302	6993421	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000468;gene_id=HG002_chrY_G0000116;Parent=HG002_chrY_T0000468;transcript_name=HG002_chrY_T0000468;gene_name=PRKY;ID=exon:HG002_chrY_T0000468:3;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	6993422	7008318	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000468;gene_id=HG002_chrY_G0000116;Parent=HG002_chrY_T0000468;transcript_name=HG002_chrY_T0000468;gene_name=PRKY;ID=intron:HG002_chrY_T0000468:3;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7008319	7008414	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000468;gene_id=HG002_chrY_G0000116;Parent=HG002_chrY_T0000468;transcript_name=HG002_chrY_T0000468;gene_name=PRKY;ID=exon:HG002_chrY_T0000468:4;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7008415	7019541	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000468;gene_id=HG002_chrY_G0000116;Parent=HG002_chrY_T0000468;transcript_name=HG002_chrY_T0000468;gene_name=PRKY;ID=intron:HG002_chrY_T0000468:4;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7019542	7019619	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000468;gene_id=HG002_chrY_G0000116;Parent=HG002_chrY_T0000468;transcript_name=HG002_chrY_T0000468;gene_name=PRKY;ID=exon:HG002_chrY_T0000468:5;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7019620	7023928	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000468;gene_id=HG002_chrY_G0000116;Parent=HG002_chrY_T0000468;transcript_name=HG002_chrY_T0000468;gene_name=PRKY;ID=intron:HG002_chrY_T0000468:5;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7023929	7024054	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG002_chrY_T0000468;gene_id=HG002_chrY_G0000116;Parent=HG002_chrY_T0000468;transcript_name=HG002_chrY_T0000468;gene_name=PRKY;ID=exon:HG002_chrY_T0000468:6;Name=PRKY;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	6976484	6976782	.	-	.	source_gene_common_name=RN7SKP282;source_gene=ENSG00000252633.1;alternative_source_transcripts=ENST00000516824.1,ENST00000516824.1;gene_id=HG002_chrY_G0000117;gene_biotype=misc_RNA;gene_name=RN7SKP282;gene_sources=liftoff;ID=HG002_chrY_G0000117;Name=RN7SKP282
HG002_chrY	CAT	transcript	6976484	6976782	1000	-	.	source_transcript=ENST00000516824.1;source_transcript_name=RN7SKP282-201;source_gene=ENSG00000252633.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000252633.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000516824.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516824.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SKP282;alternative_source_transcripts=ENST00000516824.1,ENST00000516824.1;transcript_id=HG002_chrY_T0000474;gene_id=HG002_chrY_G0000117;Parent=HG002_chrY_G0000117;transcript_name=HG002_chrY_T0000474;gene_name=RN7SKP282;ID=HG002_chrY_T0000474;Name=RN7SKP282
HG002_chrY	CAT	exon	6976484	6976782	.	-	.	source_transcript=ENST00000516824.1;source_transcript_name=RN7SKP282-201;source_gene=ENSG00000252633.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000252633.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000516824.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516824.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SKP282;alternative_source_transcripts=ENST00000516824.1,ENST00000516824.1;transcript_id=HG002_chrY_T0000474;gene_id=HG002_chrY_G0000117;Parent=HG002_chrY_T0000474;transcript_name=HG002_chrY_T0000474;gene_name=RN7SKP282;ID=exon:HG002_chrY_T0000474:0;Name=RN7SKP282;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	6993718	6993829	.	+	.	source_gene_common_name=Y_RNA;source_gene=ENSG00000251996.1;gene_id=HG002_chrY_G0000118;gene_biotype=misc_RNA;gene_name=Y_RNA;gene_sources=liftoff;ID=HG002_chrY_G0000118;Name=Y_RNA
HG002_chrY	CAT	transcript	6993718	6993829	1000	+	.	source_transcript=ENST00000516187.1;source_transcript_name=Y_RNA.666-201;source_gene=ENSG00000251996.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000251996.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000516187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516187.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=Y_RNA;transcript_id=HG002_chrY_T0000480;gene_id=HG002_chrY_G0000118;Parent=HG002_chrY_G0000118;transcript_name=HG002_chrY_T0000480;gene_name=Y_RNA;ID=HG002_chrY_T0000480;Name=Y_RNA
HG002_chrY	CAT	exon	6993718	6993829	.	+	.	source_transcript=ENST00000516187.1;source_transcript_name=Y_RNA.666-201;source_gene=ENSG00000251996.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000251996.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000516187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=Y_RNA;transcript_id=HG002_chrY_T0000480;gene_id=HG002_chrY_G0000118;Parent=HG002_chrY_T0000480;transcript_name=HG002_chrY_T0000480;gene_name=Y_RNA;ID=exon:HG002_chrY_T0000480:0;Name=Y_RNA;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	7030858	7030965	.	+	.	source_gene_common_name=RNU6-941P;source_gene=ENSG00000252155.1;gene_id=HG002_chrY_G0000119;gene_biotype=snRNA;gene_name=RNU6-941P;gene_sources=liftoff;ID=HG002_chrY_G0000119;Name=RNU6-941P
HG002_chrY	CAT	transcript	7030858	7030965	1000	+	.	source_transcript=ENST00000516346.1;source_transcript_name=RNU6-941P-201;source_gene=ENSG00000252155.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252155.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516346.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-941P;transcript_id=HG002_chrY_T0000481;gene_id=HG002_chrY_G0000119;Parent=HG002_chrY_G0000119;transcript_name=HG002_chrY_T0000481;gene_name=RNU6-941P;ID=HG002_chrY_T0000481;Name=RNU6-941P
HG002_chrY	CAT	exon	7030858	7030965	.	+	.	source_transcript=ENST00000516346.1;source_transcript_name=RNU6-941P-201;source_gene=ENSG00000252155.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252155.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-941P;transcript_id=HG002_chrY_T0000481;gene_id=HG002_chrY_G0000119;Parent=HG002_chrY_T0000481;transcript_name=HG002_chrY_T0000481;gene_name=RNU6-941P;ID=exon:HG002_chrY_T0000481:0;Name=RNU6-941P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	7075241	7075345	.	-	.	source_gene_common_name=RNU6-521P;source_gene=ENSG00000252472.1;alternative_source_transcripts=ENST00000516663.1,ENST00000516663.1;gene_id=HG002_chrY_G0000120;gene_biotype=snRNA;gene_name=RNU6-521P;gene_sources=liftoff;ID=HG002_chrY_G0000120;Name=RNU6-521P
HG002_chrY	CAT	transcript	7075241	7075345	1000	-	.	source_transcript=ENST00000516663.1;source_transcript_name=RNU6-521P-201;source_gene=ENSG00000252472.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252472.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516663.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516663.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-521P;alternative_source_transcripts=ENST00000516663.1,ENST00000516663.1;transcript_id=HG002_chrY_T0000482;gene_id=HG002_chrY_G0000120;Parent=HG002_chrY_G0000120;transcript_name=HG002_chrY_T0000482;gene_name=RNU6-521P;ID=HG002_chrY_T0000482;Name=RNU6-521P
HG002_chrY	CAT	exon	7075241	7075345	.	-	.	source_transcript=ENST00000516663.1;source_transcript_name=RNU6-521P-201;source_gene=ENSG00000252472.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252472.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516663.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516663.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-521P;alternative_source_transcripts=ENST00000516663.1,ENST00000516663.1;transcript_id=HG002_chrY_T0000482;gene_id=HG002_chrY_G0000120;Parent=HG002_chrY_T0000482;transcript_name=HG002_chrY_T0000482;gene_name=RNU6-521P;ID=exon:HG002_chrY_T0000482:0;Name=RNU6-521P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	7086675	7172761	.	+	.	source_gene_common_name=ENSG00000295056;source_gene=ENSG00000295056.1;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;gene_id=HG002_chrY_G0000121;gene_biotype=lncRNA;gene_name=ENSG00000295056;gene_sources=liftoff;ID=HG002_chrY_G0000121;Name=ENSG00000295056
HG002_chrY	CAT	transcript	7086675	7172761	1000	+	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=HG002_chrY_T0000483;gene_id=HG002_chrY_G0000121;Parent=HG002_chrY_G0000121;transcript_name=HG002_chrY_T0000483;gene_name=ENSG00000295056;ID=HG002_chrY_T0000483;Name=ENSG00000295056
HG002_chrY	CAT	exon	7086675	7086764	.	+	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=HG002_chrY_T0000483;gene_id=HG002_chrY_G0000121;Parent=HG002_chrY_T0000483;transcript_name=HG002_chrY_T0000483;gene_name=ENSG00000295056;ID=exon:HG002_chrY_T0000483:0;Name=ENSG00000295056;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7086765	7153205	.	+	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=HG002_chrY_T0000483;gene_id=HG002_chrY_G0000121;Parent=HG002_chrY_T0000483;transcript_name=HG002_chrY_T0000483;gene_name=ENSG00000295056;ID=intron:HG002_chrY_T0000483:0;Name=ENSG00000295056;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7153206	7153364	.	+	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=HG002_chrY_T0000483;gene_id=HG002_chrY_G0000121;Parent=HG002_chrY_T0000483;transcript_name=HG002_chrY_T0000483;gene_name=ENSG00000295056;ID=exon:HG002_chrY_T0000483:1;Name=ENSG00000295056;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7153365	7171155	.	+	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=HG002_chrY_T0000483;gene_id=HG002_chrY_G0000121;Parent=HG002_chrY_T0000483;transcript_name=HG002_chrY_T0000483;gene_name=ENSG00000295056;ID=intron:HG002_chrY_T0000483:1;Name=ENSG00000295056;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7171156	7171264	.	+	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=HG002_chrY_T0000483;gene_id=HG002_chrY_G0000121;Parent=HG002_chrY_T0000483;transcript_name=HG002_chrY_T0000483;gene_name=ENSG00000295056;ID=exon:HG002_chrY_T0000483:2;Name=ENSG00000295056;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7171265	7172296	.	+	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=HG002_chrY_T0000483;gene_id=HG002_chrY_G0000121;Parent=HG002_chrY_T0000483;transcript_name=HG002_chrY_T0000483;gene_name=ENSG00000295056;ID=intron:HG002_chrY_T0000483:2;Name=ENSG00000295056;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7172297	7172761	.	+	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=HG002_chrY_T0000483;gene_id=HG002_chrY_G0000121;Parent=HG002_chrY_T0000483;transcript_name=HG002_chrY_T0000483;gene_name=ENSG00000295056;ID=exon:HG002_chrY_T0000483:3;Name=ENSG00000295056;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	7309535	7309919	.	+	.	source_gene_common_name=ENSG00000275280;source_gene=ENSG00000275280.1;alternative_source_transcripts=ENST00000619838.1,ENST00000619838.1;gene_id=HG002_chrY_G0000122;gene_biotype=processed_pseudogene;gene_name=ENSG00000275280;gene_sources=liftoff;ID=HG002_chrY_G0000122;Name=ENSG00000275280
HG002_chrY	CAT	transcript	7309535	7309919	1000	+	.	source_transcript=ENST00000619838.1;source_transcript_name=ENST00000619838;source_gene=ENSG00000275280.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000275280.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619838.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275280;alternative_source_transcripts=ENST00000619838.1,ENST00000619838.1;transcript_id=HG002_chrY_T0000484;gene_id=HG002_chrY_G0000122;Parent=HG002_chrY_G0000122;transcript_name=HG002_chrY_T0000484;gene_name=ENSG00000275280;ID=HG002_chrY_T0000484;Name=ENSG00000275280
HG002_chrY	CAT	exon	7309535	7309919	.	+	.	source_transcript=ENST00000619838.1;source_transcript_name=ENST00000619838;source_gene=ENSG00000275280.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000275280.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619838.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275280;alternative_source_transcripts=ENST00000619838.1,ENST00000619838.1;transcript_id=HG002_chrY_T0000484;gene_id=HG002_chrY_G0000122;Parent=HG002_chrY_T0000484;transcript_name=HG002_chrY_T0000484;gene_name=ENSG00000275280;ID=exon:HG002_chrY_T0000484:0;Name=ENSG00000275280;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	7324284	7328565	.	-	.	source_gene_common_name=RBMY2HP;source_gene=ENSG00000238073.1;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;gene_id=HG002_chrY_G0000123;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2HP;gene_sources=liftoff;ID=HG002_chrY_G0000123;Name=RBMY2HP
HG002_chrY	CAT	transcript	7324284	7328565	1000	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=HG002_chrY_T0000485;gene_id=HG002_chrY_G0000123;Parent=HG002_chrY_G0000123;transcript_name=HG002_chrY_T0000485;gene_name=RBMY2HP;ID=HG002_chrY_T0000485;Name=RBMY2HP
HG002_chrY	CAT	exon	7324284	7324583	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=HG002_chrY_T0000485;gene_id=HG002_chrY_G0000123;Parent=HG002_chrY_T0000485;transcript_name=HG002_chrY_T0000485;gene_name=RBMY2HP;ID=exon:HG002_chrY_T0000485:0;Name=RBMY2HP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7324584	7324990	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=HG002_chrY_T0000485;gene_id=HG002_chrY_G0000123;Parent=HG002_chrY_T0000485;transcript_name=HG002_chrY_T0000485;gene_name=RBMY2HP;ID=intron:HG002_chrY_T0000485:0;Name=RBMY2HP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7324991	7325079	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=HG002_chrY_T0000485;gene_id=HG002_chrY_G0000123;Parent=HG002_chrY_T0000485;transcript_name=HG002_chrY_T0000485;gene_name=RBMY2HP;ID=exon:HG002_chrY_T0000485:1;Name=RBMY2HP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7325080	7325168	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=HG002_chrY_T0000485;gene_id=HG002_chrY_G0000123;Parent=HG002_chrY_T0000485;transcript_name=HG002_chrY_T0000485;gene_name=RBMY2HP;ID=intron:HG002_chrY_T0000485:1;Name=RBMY2HP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7325169	7325279	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=HG002_chrY_T0000485;gene_id=HG002_chrY_G0000123;Parent=HG002_chrY_T0000485;transcript_name=HG002_chrY_T0000485;gene_name=RBMY2HP;ID=exon:HG002_chrY_T0000485:2;Name=RBMY2HP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7325280	7327906	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=HG002_chrY_T0000485;gene_id=HG002_chrY_G0000123;Parent=HG002_chrY_T0000485;transcript_name=HG002_chrY_T0000485;gene_name=RBMY2HP;ID=intron:HG002_chrY_T0000485:2;Name=RBMY2HP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7327907	7328012	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=HG002_chrY_T0000485;gene_id=HG002_chrY_G0000123;Parent=HG002_chrY_T0000485;transcript_name=HG002_chrY_T0000485;gene_name=RBMY2HP;ID=exon:HG002_chrY_T0000485:3;Name=RBMY2HP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7328013	7328451	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=HG002_chrY_T0000485;gene_id=HG002_chrY_G0000123;Parent=HG002_chrY_T0000485;transcript_name=HG002_chrY_T0000485;gene_name=RBMY2HP;ID=intron:HG002_chrY_T0000485:3;Name=RBMY2HP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7328452	7328565	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=HG002_chrY_T0000485;gene_id=HG002_chrY_G0000123;Parent=HG002_chrY_T0000485;transcript_name=HG002_chrY_T0000485;gene_name=RBMY2HP;ID=exon:HG002_chrY_T0000485:4;Name=RBMY2HP;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	7331441	7333570	.	+	.	source_gene_common_name=ENSG00000223422;source_gene=ENSG00000223422.1;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;gene_id=HG002_chrY_G0000124;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000223422;gene_sources=liftoff;ID=HG002_chrY_G0000124;Name=ENSG00000223422
HG002_chrY	CAT	transcript	7331441	7333570	1000	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=299.849;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=HG002_chrY_T0000486;gene_id=HG002_chrY_G0000124;Parent=HG002_chrY_G0000124;transcript_name=HG002_chrY_T0000486;gene_name=ENSG00000223422;ID=HG002_chrY_T0000486;Name=ENSG00000223422
HG002_chrY	CAT	exon	7331441	7331752	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=299.849;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=HG002_chrY_T0000486;gene_id=HG002_chrY_G0000124;Parent=HG002_chrY_T0000486;transcript_name=HG002_chrY_T0000486;gene_name=ENSG00000223422;ID=exon:HG002_chrY_T0000486:0;Name=ENSG00000223422;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7331753	7332808	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=299.849;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=HG002_chrY_T0000486;gene_id=HG002_chrY_G0000124;Parent=HG002_chrY_T0000486;transcript_name=HG002_chrY_T0000486;gene_name=ENSG00000223422;ID=intron:HG002_chrY_T0000486:0;Name=ENSG00000223422;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7332809	7332874	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=299.849;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=HG002_chrY_T0000486;gene_id=HG002_chrY_G0000124;Parent=HG002_chrY_T0000486;transcript_name=HG002_chrY_T0000486;gene_name=ENSG00000223422;ID=exon:HG002_chrY_T0000486:1;Name=ENSG00000223422;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7332875	7333069	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=299.849;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=HG002_chrY_T0000486;gene_id=HG002_chrY_G0000124;Parent=HG002_chrY_T0000486;transcript_name=HG002_chrY_T0000486;gene_name=ENSG00000223422;ID=intron:HG002_chrY_T0000486:1;Name=ENSG00000223422;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7333070	7333162	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=299.849;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=HG002_chrY_T0000486;gene_id=HG002_chrY_G0000124;Parent=HG002_chrY_T0000486;transcript_name=HG002_chrY_T0000486;gene_name=ENSG00000223422;ID=exon:HG002_chrY_T0000486:2;Name=ENSG00000223422;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7333163	7333261	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=299.849;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=HG002_chrY_T0000486;gene_id=HG002_chrY_G0000124;Parent=HG002_chrY_T0000486;transcript_name=HG002_chrY_T0000486;gene_name=ENSG00000223422;ID=intron:HG002_chrY_T0000486:2;Name=ENSG00000223422;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7333262	7333406	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=299.849;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=HG002_chrY_T0000486;gene_id=HG002_chrY_G0000124;Parent=HG002_chrY_T0000486;transcript_name=HG002_chrY_T0000486;gene_name=ENSG00000223422;ID=exon:HG002_chrY_T0000486:3;Name=ENSG00000223422;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7333407	7333524	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=299.849;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=HG002_chrY_T0000486;gene_id=HG002_chrY_G0000124;Parent=HG002_chrY_T0000486;transcript_name=HG002_chrY_T0000486;gene_name=ENSG00000223422;ID=intron:HG002_chrY_T0000486:3;Name=ENSG00000223422;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7333525	7333570	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=299.849;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=HG002_chrY_T0000486;gene_id=HG002_chrY_G0000124;Parent=HG002_chrY_T0000486;transcript_name=HG002_chrY_T0000486;gene_name=ENSG00000223422;ID=exon:HG002_chrY_T0000486:4;Name=ENSG00000223422;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	7340273	7342082	.	-	.	source_gene_common_name=TSPY12P;source_gene=ENSG00000236435.1;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;gene_id=HG002_chrY_G0000125;gene_biotype=unprocessed_pseudogene;gene_name=TSPY12P;gene_sources=liftoff;ID=HG002_chrY_G0000125;Name=TSPY12P
HG002_chrY	CAT	transcript	7340273	7342082	1000	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=HG002_chrY_T0000487;gene_id=HG002_chrY_G0000125;Parent=HG002_chrY_G0000125;transcript_name=HG002_chrY_T0000487;gene_name=TSPY12P;ID=HG002_chrY_T0000487;Name=TSPY12P
HG002_chrY	CAT	exon	7340273	7340337	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=HG002_chrY_T0000487;gene_id=HG002_chrY_G0000125;Parent=HG002_chrY_T0000487;transcript_name=HG002_chrY_T0000487;gene_name=TSPY12P;ID=exon:HG002_chrY_T0000487:0;Name=TSPY12P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7340338	7340430	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=HG002_chrY_T0000487;gene_id=HG002_chrY_G0000125;Parent=HG002_chrY_T0000487;transcript_name=HG002_chrY_T0000487;gene_name=TSPY12P;ID=intron:HG002_chrY_T0000487:0;Name=TSPY12P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7340431	7340576	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=HG002_chrY_T0000487;gene_id=HG002_chrY_G0000125;Parent=HG002_chrY_T0000487;transcript_name=HG002_chrY_T0000487;gene_name=TSPY12P;ID=exon:HG002_chrY_T0000487:1;Name=TSPY12P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7340577	7340674	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=HG002_chrY_T0000487;gene_id=HG002_chrY_G0000125;Parent=HG002_chrY_T0000487;transcript_name=HG002_chrY_T0000487;gene_name=TSPY12P;ID=intron:HG002_chrY_T0000487:1;Name=TSPY12P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7340675	7340785	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=HG002_chrY_T0000487;gene_id=HG002_chrY_G0000125;Parent=HG002_chrY_T0000487;transcript_name=HG002_chrY_T0000487;gene_name=TSPY12P;ID=exon:HG002_chrY_T0000487:2;Name=TSPY12P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7340786	7340916	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=HG002_chrY_T0000487;gene_id=HG002_chrY_G0000125;Parent=HG002_chrY_T0000487;transcript_name=HG002_chrY_T0000487;gene_name=TSPY12P;ID=intron:HG002_chrY_T0000487:2;Name=TSPY12P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7340917	7340990	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=HG002_chrY_T0000487;gene_id=HG002_chrY_G0000125;Parent=HG002_chrY_T0000487;transcript_name=HG002_chrY_T0000487;gene_name=TSPY12P;ID=exon:HG002_chrY_T0000487:3;Name=TSPY12P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7340991	7341610	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=HG002_chrY_T0000487;gene_id=HG002_chrY_G0000125;Parent=HG002_chrY_T0000487;transcript_name=HG002_chrY_T0000487;gene_name=TSPY12P;ID=intron:HG002_chrY_T0000487:3;Name=TSPY12P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7341611	7342082	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=HG002_chrY_T0000487;gene_id=HG002_chrY_G0000125;Parent=HG002_chrY_T0000487;transcript_name=HG002_chrY_T0000487;gene_name=TSPY12P;ID=exon:HG002_chrY_T0000487:4;Name=TSPY12P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	7343045	7345212	.	+	.	source_gene_common_name=ENSG00000236690;source_gene=ENSG00000236690.2;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;gene_id=HG002_chrY_G0000126;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000236690;gene_sources=liftoff;ID=HG002_chrY_G0000126;Name=ENSG00000236690
HG002_chrY	CAT	transcript	7343045	7345212	1000	+	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=HG002_chrY_T0000488;gene_id=HG002_chrY_G0000126;Parent=HG002_chrY_G0000126;transcript_name=HG002_chrY_T0000488;gene_name=ENSG00000236690;ID=HG002_chrY_T0000488;Name=ENSG00000236690
HG002_chrY	CAT	exon	7343045	7343371	.	+	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=HG002_chrY_T0000488;gene_id=HG002_chrY_G0000126;Parent=HG002_chrY_T0000488;transcript_name=HG002_chrY_T0000488;gene_name=ENSG00000236690;ID=exon:HG002_chrY_T0000488:0;Name=ENSG00000236690;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7343372	7344693	.	+	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=HG002_chrY_T0000488;gene_id=HG002_chrY_G0000126;Parent=HG002_chrY_T0000488;transcript_name=HG002_chrY_T0000488;gene_name=ENSG00000236690;ID=intron:HG002_chrY_T0000488:0;Name=ENSG00000236690;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7344694	7344811	.	+	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=HG002_chrY_T0000488;gene_id=HG002_chrY_G0000126;Parent=HG002_chrY_T0000488;transcript_name=HG002_chrY_T0000488;gene_name=ENSG00000236690;ID=exon:HG002_chrY_T0000488:1;Name=ENSG00000236690;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7344812	7344897	.	+	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=HG002_chrY_T0000488;gene_id=HG002_chrY_G0000126;Parent=HG002_chrY_T0000488;transcript_name=HG002_chrY_T0000488;gene_name=ENSG00000236690;ID=intron:HG002_chrY_T0000488:1;Name=ENSG00000236690;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7344898	7345067	.	+	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=HG002_chrY_T0000488;gene_id=HG002_chrY_G0000126;Parent=HG002_chrY_T0000488;transcript_name=HG002_chrY_T0000488;gene_name=ENSG00000236690;ID=exon:HG002_chrY_T0000488:2;Name=ENSG00000236690;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7345068	7345165	.	+	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=HG002_chrY_T0000488;gene_id=HG002_chrY_G0000126;Parent=HG002_chrY_T0000488;transcript_name=HG002_chrY_T0000488;gene_name=ENSG00000236690;ID=intron:HG002_chrY_T0000488:2;Name=ENSG00000236690;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7345166	7345212	.	+	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=HG002_chrY_T0000488;gene_id=HG002_chrY_G0000126;Parent=HG002_chrY_T0000488;transcript_name=HG002_chrY_T0000488;gene_name=ENSG00000236690;ID=exon:HG002_chrY_T0000488:3;Name=ENSG00000236690;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	7347241	7466150	.	-	.	source_gene_common_name=TTTY16;source_gene=ENSG00000290323.2;gene_id=HG002_chrY_G0000127;gene_biotype=lncRNA;gene_name=TTTY16;gene_sources=liftoff;ID=HG002_chrY_G0000127;Name=TTTY16
HG002_chrY	CAT	transcript	7347241	7465112	1000	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000489;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_G0000127;transcript_name=HG002_chrY_T0000489;gene_name=TTTY16;ID=HG002_chrY_T0000489;Name=TTTY16
HG002_chrY	CAT	exon	7347241	7347651	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000489;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000489;transcript_name=HG002_chrY_T0000489;gene_name=TTTY16;ID=exon:HG002_chrY_T0000489:0;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7347652	7349613	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000489;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000489;transcript_name=HG002_chrY_T0000489;gene_name=TTTY16;ID=intron:HG002_chrY_T0000489:0;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7349614	7349808	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000489;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000489;transcript_name=HG002_chrY_T0000489;gene_name=TTTY16;ID=exon:HG002_chrY_T0000489:1;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7349809	7351720	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000489;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000489;transcript_name=HG002_chrY_T0000489;gene_name=TTTY16;ID=intron:HG002_chrY_T0000489:1;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7351721	7352021	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000489;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000489;transcript_name=HG002_chrY_T0000489;gene_name=TTTY16;ID=exon:HG002_chrY_T0000489:2;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7352022	7353720	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000489;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000489;transcript_name=HG002_chrY_T0000489;gene_name=TTTY16;ID=intron:HG002_chrY_T0000489:2;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7353721	7353797	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000489;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000489;transcript_name=HG002_chrY_T0000489;gene_name=TTTY16;ID=exon:HG002_chrY_T0000489:3;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7353798	7363703	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000489;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000489;transcript_name=HG002_chrY_T0000489;gene_name=TTTY16;ID=intron:HG002_chrY_T0000489:3;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7363704	7363852	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000489;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000489;transcript_name=HG002_chrY_T0000489;gene_name=TTTY16;ID=exon:HG002_chrY_T0000489:4;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7363853	7365401	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000489;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000489;transcript_name=HG002_chrY_T0000489;gene_name=TTTY16;ID=intron:HG002_chrY_T0000489:4;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7365402	7365630	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000489;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000489;transcript_name=HG002_chrY_T0000489;gene_name=TTTY16;ID=exon:HG002_chrY_T0000489:5;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7365631	7432365	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000489;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000489;transcript_name=HG002_chrY_T0000489;gene_name=TTTY16;ID=intron:HG002_chrY_T0000489:5;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7432366	7432549	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000489;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000489;transcript_name=HG002_chrY_T0000489;gene_name=TTTY16;ID=exon:HG002_chrY_T0000489:6;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7432550	7464998	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000489;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000489;transcript_name=HG002_chrY_T0000489;gene_name=TTTY16;ID=intron:HG002_chrY_T0000489:6;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7464999	7465112	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000489;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000489;transcript_name=HG002_chrY_T0000489;gene_name=TTTY16;ID=exon:HG002_chrY_T0000489:7;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	7347244	7433072	1000	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000490;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_G0000127;transcript_name=HG002_chrY_T0000490;gene_name=TTTY16;ID=HG002_chrY_T0000490;Name=TTTY16
HG002_chrY	CAT	exon	7347244	7348318	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000490;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000490;transcript_name=HG002_chrY_T0000490;gene_name=TTTY16;ID=exon:HG002_chrY_T0000490:0;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7348319	7349613	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000490;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000490;transcript_name=HG002_chrY_T0000490;gene_name=TTTY16;ID=intron:HG002_chrY_T0000490:0;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7349614	7349808	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000490;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000490;transcript_name=HG002_chrY_T0000490;gene_name=TTTY16;ID=exon:HG002_chrY_T0000490:1;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7349809	7351720	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000490;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000490;transcript_name=HG002_chrY_T0000490;gene_name=TTTY16;ID=intron:HG002_chrY_T0000490:1;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7351721	7352021	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000490;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000490;transcript_name=HG002_chrY_T0000490;gene_name=TTTY16;ID=exon:HG002_chrY_T0000490:2;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7352022	7353720	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000490;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000490;transcript_name=HG002_chrY_T0000490;gene_name=TTTY16;ID=intron:HG002_chrY_T0000490:2;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7353721	7353797	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000490;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000490;transcript_name=HG002_chrY_T0000490;gene_name=TTTY16;ID=exon:HG002_chrY_T0000490:3;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7353798	7363703	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000490;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000490;transcript_name=HG002_chrY_T0000490;gene_name=TTTY16;ID=intron:HG002_chrY_T0000490:3;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7363704	7363852	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000490;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000490;transcript_name=HG002_chrY_T0000490;gene_name=TTTY16;ID=exon:HG002_chrY_T0000490:4;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7363853	7365401	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000490;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000490;transcript_name=HG002_chrY_T0000490;gene_name=TTTY16;ID=intron:HG002_chrY_T0000490:4;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7365402	7365630	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000490;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000490;transcript_name=HG002_chrY_T0000490;gene_name=TTTY16;ID=exon:HG002_chrY_T0000490:5;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7365631	7425788	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000490;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000490;transcript_name=HG002_chrY_T0000490;gene_name=TTTY16;ID=intron:HG002_chrY_T0000490:5;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7425789	7425852	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000490;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000490;transcript_name=HG002_chrY_T0000490;gene_name=TTTY16;ID=exon:HG002_chrY_T0000490:6;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7425853	7432365	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000490;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000490;transcript_name=HG002_chrY_T0000490;gene_name=TTTY16;ID=intron:HG002_chrY_T0000490:6;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7432366	7432549	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000490;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000490;transcript_name=HG002_chrY_T0000490;gene_name=TTTY16;ID=exon:HG002_chrY_T0000490:7;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7432550	7432929	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000490;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000490;transcript_name=HG002_chrY_T0000490;gene_name=TTTY16;ID=intron:HG002_chrY_T0000490:7;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7432930	7433072	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000490;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000490;transcript_name=HG002_chrY_T0000490;gene_name=TTTY16;ID=exon:HG002_chrY_T0000490:8;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	7349094	7459556	1000	-	.	source_transcript=ENST00000755365.1;source_transcript_name=TTTY16-204;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755365.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000491;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_G0000127;transcript_name=HG002_chrY_T0000491;gene_name=TTTY16;ID=HG002_chrY_T0000491;Name=TTTY16
HG002_chrY	CAT	exon	7349094	7349808	.	-	.	source_transcript=ENST00000755365.1;source_transcript_name=TTTY16-204;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000491;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000491;transcript_name=HG002_chrY_T0000491;gene_name=TTTY16;ID=exon:HG002_chrY_T0000491:0;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7349809	7432365	.	-	.	source_transcript=ENST00000755365.1;source_transcript_name=TTTY16-204;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000491;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000491;transcript_name=HG002_chrY_T0000491;gene_name=TTTY16;ID=intron:HG002_chrY_T0000491:0;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7432366	7432552	.	-	.	source_transcript=ENST00000755365.1;source_transcript_name=TTTY16-204;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000491;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000491;transcript_name=HG002_chrY_T0000491;gene_name=TTTY16;ID=exon:HG002_chrY_T0000491:1;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7432553	7459442	.	-	.	source_transcript=ENST00000755365.1;source_transcript_name=TTTY16-204;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000491;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000491;transcript_name=HG002_chrY_T0000491;gene_name=TTTY16;ID=intron:HG002_chrY_T0000491:1;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7459443	7459556	.	-	.	source_transcript=ENST00000755365.1;source_transcript_name=TTTY16-204;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000491;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000491;transcript_name=HG002_chrY_T0000491;gene_name=TTTY16;ID=exon:HG002_chrY_T0000491:2;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	7357396	7426045	1000	-	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000492;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_G0000127;transcript_name=HG002_chrY_T0000492;gene_name=TTTY16;ID=HG002_chrY_T0000492;Name=TTTY16
HG002_chrY	CAT	exon	7357396	7357456	.	-	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000492;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000492;transcript_name=HG002_chrY_T0000492;gene_name=TTTY16;ID=exon:HG002_chrY_T0000492:0;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7357457	7363703	.	-	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000492;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000492;transcript_name=HG002_chrY_T0000492;gene_name=TTTY16;ID=intron:HG002_chrY_T0000492:0;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7363704	7363852	.	-	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000492;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000492;transcript_name=HG002_chrY_T0000492;gene_name=TTTY16;ID=exon:HG002_chrY_T0000492:1;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7363853	7365401	.	-	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000492;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000492;transcript_name=HG002_chrY_T0000492;gene_name=TTTY16;ID=intron:HG002_chrY_T0000492:1;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7365402	7365630	.	-	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000492;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000492;transcript_name=HG002_chrY_T0000492;gene_name=TTTY16;ID=exon:HG002_chrY_T0000492:2;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7365631	7425788	.	-	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000492;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000492;transcript_name=HG002_chrY_T0000492;gene_name=TTTY16;ID=intron:HG002_chrY_T0000492:2;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7425789	7426045	.	-	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000492;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000492;transcript_name=HG002_chrY_T0000492;gene_name=TTTY16;ID=exon:HG002_chrY_T0000492:3;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	7398441	7465046	1000	-	.	source_transcript=ENST00000755367.1;source_transcript_name=TTTY16-206;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755367.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000494;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_G0000127;transcript_name=HG002_chrY_T0000494;gene_name=TTTY16;ID=HG002_chrY_T0000494;Name=TTTY16
HG002_chrY	CAT	exon	7398441	7398881	.	-	.	source_transcript=ENST00000755367.1;source_transcript_name=TTTY16-206;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000494;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000494;transcript_name=HG002_chrY_T0000494;gene_name=TTTY16;ID=exon:HG002_chrY_T0000494:0;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7398882	7432365	.	-	.	source_transcript=ENST00000755367.1;source_transcript_name=TTTY16-206;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000494;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000494;transcript_name=HG002_chrY_T0000494;gene_name=TTTY16;ID=intron:HG002_chrY_T0000494:0;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7432366	7432549	.	-	.	source_transcript=ENST00000755367.1;source_transcript_name=TTTY16-206;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000494;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000494;transcript_name=HG002_chrY_T0000494;gene_name=TTTY16;ID=exon:HG002_chrY_T0000494:1;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7432550	7464998	.	-	.	source_transcript=ENST00000755367.1;source_transcript_name=TTTY16-206;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000494;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000494;transcript_name=HG002_chrY_T0000494;gene_name=TTTY16;ID=intron:HG002_chrY_T0000494:1;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7464999	7465046	.	-	.	source_transcript=ENST00000755367.1;source_transcript_name=TTTY16-206;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000494;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000494;transcript_name=HG002_chrY_T0000494;gene_name=TTTY16;ID=exon:HG002_chrY_T0000494:2;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	7398441	7459766	1000	-	.	source_transcript=ENST00000755370.1;source_transcript_name=TTTY16-209;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755370.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000495;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_G0000127;transcript_name=HG002_chrY_T0000495;gene_name=TTTY16;ID=HG002_chrY_T0000495;Name=TTTY16
HG002_chrY	CAT	exon	7398441	7398881	.	-	.	source_transcript=ENST00000755370.1;source_transcript_name=TTTY16-209;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755370.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000495;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000495;transcript_name=HG002_chrY_T0000495;gene_name=TTTY16;ID=exon:HG002_chrY_T0000495:0;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7398882	7432365	.	-	.	source_transcript=ENST00000755370.1;source_transcript_name=TTTY16-209;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755370.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000495;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000495;transcript_name=HG002_chrY_T0000495;gene_name=TTTY16;ID=intron:HG002_chrY_T0000495:0;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7432366	7432552	.	-	.	source_transcript=ENST00000755370.1;source_transcript_name=TTTY16-209;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755370.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000495;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000495;transcript_name=HG002_chrY_T0000495;gene_name=TTTY16;ID=exon:HG002_chrY_T0000495:1;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7432553	7459659	.	-	.	source_transcript=ENST00000755370.1;source_transcript_name=TTTY16-209;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755370.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000495;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000495;transcript_name=HG002_chrY_T0000495;gene_name=TTTY16;ID=intron:HG002_chrY_T0000495:1;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7459660	7459766	.	-	.	source_transcript=ENST00000755370.1;source_transcript_name=TTTY16-209;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755370.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000495;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000495;transcript_name=HG002_chrY_T0000495;gene_name=TTTY16;ID=exon:HG002_chrY_T0000495:2;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	7398443	7459770	1000	-	.	source_transcript=ENST00000755369.1;source_transcript_name=TTTY16-208;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755369.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000496;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_G0000127;transcript_name=HG002_chrY_T0000496;gene_name=TTTY16;ID=HG002_chrY_T0000496;Name=TTTY16
HG002_chrY	CAT	exon	7398443	7398881	.	-	.	source_transcript=ENST00000755369.1;source_transcript_name=TTTY16-208;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755369.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000496;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000496;transcript_name=HG002_chrY_T0000496;gene_name=TTTY16;ID=exon:HG002_chrY_T0000496:0;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7398882	7432365	.	-	.	source_transcript=ENST00000755369.1;source_transcript_name=TTTY16-208;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755369.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000496;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000496;transcript_name=HG002_chrY_T0000496;gene_name=TTTY16;ID=intron:HG002_chrY_T0000496:0;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7432366	7432549	.	-	.	source_transcript=ENST00000755369.1;source_transcript_name=TTTY16-208;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755369.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000496;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000496;transcript_name=HG002_chrY_T0000496;gene_name=TTTY16;ID=exon:HG002_chrY_T0000496:1;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7432550	7459659	.	-	.	source_transcript=ENST00000755369.1;source_transcript_name=TTTY16-208;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755369.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000496;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000496;transcript_name=HG002_chrY_T0000496;gene_name=TTTY16;ID=intron:HG002_chrY_T0000496:1;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7459660	7459770	.	-	.	source_transcript=ENST00000755369.1;source_transcript_name=TTTY16-208;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755369.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000496;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000496;transcript_name=HG002_chrY_T0000496;gene_name=TTTY16;ID=exon:HG002_chrY_T0000496:2;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	7398449	7465106	1000	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000497;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_G0000127;transcript_name=HG002_chrY_T0000497;gene_name=TTTY16;ID=HG002_chrY_T0000497;Name=TTTY16
HG002_chrY	CAT	exon	7398449	7398881	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000497;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000497;transcript_name=HG002_chrY_T0000497;gene_name=TTTY16;ID=exon:HG002_chrY_T0000497:0;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7398882	7432365	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000497;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000497;transcript_name=HG002_chrY_T0000497;gene_name=TTTY16;ID=intron:HG002_chrY_T0000497:0;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7432366	7432552	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000497;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000497;transcript_name=HG002_chrY_T0000497;gene_name=TTTY16;ID=exon:HG002_chrY_T0000497:1;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7432553	7432678	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000497;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000497;transcript_name=HG002_chrY_T0000497;gene_name=TTTY16;ID=intron:HG002_chrY_T0000497:1;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7432679	7432873	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000497;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000497;transcript_name=HG002_chrY_T0000497;gene_name=TTTY16;ID=exon:HG002_chrY_T0000497:2;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7432874	7461339	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000497;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000497;transcript_name=HG002_chrY_T0000497;gene_name=TTTY16;ID=intron:HG002_chrY_T0000497:2;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7461340	7461449	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000497;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000497;transcript_name=HG002_chrY_T0000497;gene_name=TTTY16;ID=exon:HG002_chrY_T0000497:3;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7461450	7464998	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000497;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000497;transcript_name=HG002_chrY_T0000497;gene_name=TTTY16;ID=intron:HG002_chrY_T0000497:3;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7464999	7465106	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000497;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000497;transcript_name=HG002_chrY_T0000497;gene_name=TTTY16;ID=exon:HG002_chrY_T0000497:4;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	7398449	7459654	1000	-	.	source_transcript=ENST00000755372.1;source_transcript_name=TTTY16-211;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755372.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000498;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_G0000127;transcript_name=HG002_chrY_T0000498;gene_name=TTTY16;ID=HG002_chrY_T0000498;Name=TTTY16
HG002_chrY	CAT	exon	7398449	7398881	.	-	.	source_transcript=ENST00000755372.1;source_transcript_name=TTTY16-211;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000498;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000498;transcript_name=HG002_chrY_T0000498;gene_name=TTTY16;ID=exon:HG002_chrY_T0000498:0;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7398882	7432365	.	-	.	source_transcript=ENST00000755372.1;source_transcript_name=TTTY16-211;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000498;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000498;transcript_name=HG002_chrY_T0000498;gene_name=TTTY16;ID=intron:HG002_chrY_T0000498:0;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7432366	7432552	.	-	.	source_transcript=ENST00000755372.1;source_transcript_name=TTTY16-211;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000498;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000498;transcript_name=HG002_chrY_T0000498;gene_name=TTTY16;ID=exon:HG002_chrY_T0000498:1;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7432553	7459442	.	-	.	source_transcript=ENST00000755372.1;source_transcript_name=TTTY16-211;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000498;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000498;transcript_name=HG002_chrY_T0000498;gene_name=TTTY16;ID=intron:HG002_chrY_T0000498:1;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7459443	7459654	.	-	.	source_transcript=ENST00000755372.1;source_transcript_name=TTTY16-211;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000498;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000498;transcript_name=HG002_chrY_T0000498;gene_name=TTTY16;ID=exon:HG002_chrY_T0000498:2;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	7398449	7433086	1000	-	.	source_transcript=ENST00000755373.1;source_transcript_name=TTTY16-212;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755373.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755373.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000499;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_G0000127;transcript_name=HG002_chrY_T0000499;gene_name=TTTY16;ID=HG002_chrY_T0000499;Name=TTTY16
HG002_chrY	CAT	exon	7398449	7398881	.	-	.	source_transcript=ENST00000755373.1;source_transcript_name=TTTY16-212;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755373.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755373.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000499;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000499;transcript_name=HG002_chrY_T0000499;gene_name=TTTY16;ID=exon:HG002_chrY_T0000499:0;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7398882	7432365	.	-	.	source_transcript=ENST00000755373.1;source_transcript_name=TTTY16-212;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755373.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755373.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000499;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000499;transcript_name=HG002_chrY_T0000499;gene_name=TTTY16;ID=intron:HG002_chrY_T0000499:0;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7432366	7432549	.	-	.	source_transcript=ENST00000755373.1;source_transcript_name=TTTY16-212;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755373.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755373.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000499;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000499;transcript_name=HG002_chrY_T0000499;gene_name=TTTY16;ID=exon:HG002_chrY_T0000499:1;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7432550	7432929	.	-	.	source_transcript=ENST00000755373.1;source_transcript_name=TTTY16-212;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755373.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755373.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000499;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000499;transcript_name=HG002_chrY_T0000499;gene_name=TTTY16;ID=intron:HG002_chrY_T0000499:1;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7432930	7433086	.	-	.	source_transcript=ENST00000755373.1;source_transcript_name=TTTY16-212;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755373.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755373.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000499;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000499;transcript_name=HG002_chrY_T0000499;gene_name=TTTY16;ID=exon:HG002_chrY_T0000499:2;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	7398449	7426102	1000	-	.	source_transcript=ENST00000755374.1;source_transcript_name=TTTY16-213;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755374.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000500;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_G0000127;transcript_name=HG002_chrY_T0000500;gene_name=TTTY16;ID=HG002_chrY_T0000500;Name=TTTY16
HG002_chrY	CAT	exon	7398449	7398881	.	-	.	source_transcript=ENST00000755374.1;source_transcript_name=TTTY16-213;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755374.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000500;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000500;transcript_name=HG002_chrY_T0000500;gene_name=TTTY16;ID=exon:HG002_chrY_T0000500:0;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7398882	7425788	.	-	.	source_transcript=ENST00000755374.1;source_transcript_name=TTTY16-213;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755374.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000500;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000500;transcript_name=HG002_chrY_T0000500;gene_name=TTTY16;ID=intron:HG002_chrY_T0000500:0;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7425789	7426102	.	-	.	source_transcript=ENST00000755374.1;source_transcript_name=TTTY16-213;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755374.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000500;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000500;transcript_name=HG002_chrY_T0000500;gene_name=TTTY16;ID=exon:HG002_chrY_T0000500:1;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	7398449	7459697	1000	-	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000501;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_G0000127;transcript_name=HG002_chrY_T0000501;gene_name=TTTY16;ID=HG002_chrY_T0000501;Name=TTTY16
HG002_chrY	CAT	exon	7398449	7398881	.	-	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000501;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000501;transcript_name=HG002_chrY_T0000501;gene_name=TTTY16;ID=exon:HG002_chrY_T0000501:0;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7398882	7425788	.	-	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000501;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000501;transcript_name=HG002_chrY_T0000501;gene_name=TTTY16;ID=intron:HG002_chrY_T0000501:0;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7425789	7425848	.	-	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000501;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000501;transcript_name=HG002_chrY_T0000501;gene_name=TTTY16;ID=exon:HG002_chrY_T0000501:1;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7425849	7432365	.	-	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000501;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000501;transcript_name=HG002_chrY_T0000501;gene_name=TTTY16;ID=intron:HG002_chrY_T0000501:1;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7432366	7432549	.	-	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000501;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000501;transcript_name=HG002_chrY_T0000501;gene_name=TTTY16;ID=exon:HG002_chrY_T0000501:2;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7432550	7459659	.	-	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000501;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000501;transcript_name=HG002_chrY_T0000501;gene_name=TTTY16;ID=intron:HG002_chrY_T0000501:2;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7459660	7459697	.	-	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000501;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000501;transcript_name=HG002_chrY_T0000501;gene_name=TTTY16;ID=exon:HG002_chrY_T0000501:3;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	7398453	7466150	1000	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000502;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_G0000127;transcript_name=HG002_chrY_T0000502;gene_name=TTTY16;ID=HG002_chrY_T0000502;Name=TTTY16
HG002_chrY	CAT	exon	7398453	7398881	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000502;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000502;transcript_name=HG002_chrY_T0000502;gene_name=TTTY16;ID=exon:HG002_chrY_T0000502:0;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7398882	7432365	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000502;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000502;transcript_name=HG002_chrY_T0000502;gene_name=TTTY16;ID=intron:HG002_chrY_T0000502:0;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7432366	7432549	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000502;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000502;transcript_name=HG002_chrY_T0000502;gene_name=TTTY16;ID=exon:HG002_chrY_T0000502:1;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7432550	7461339	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000502;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000502;transcript_name=HG002_chrY_T0000502;gene_name=TTTY16;ID=intron:HG002_chrY_T0000502:1;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7461340	7461449	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000502;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000502;transcript_name=HG002_chrY_T0000502;gene_name=TTTY16;ID=exon:HG002_chrY_T0000502:2;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7461450	7464998	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000502;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000502;transcript_name=HG002_chrY_T0000502;gene_name=TTTY16;ID=intron:HG002_chrY_T0000502:2;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7464999	7465087	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000502;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000502;transcript_name=HG002_chrY_T0000502;gene_name=TTTY16;ID=exon:HG002_chrY_T0000502:3;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7465088	7465323	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000502;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000502;transcript_name=HG002_chrY_T0000502;gene_name=TTTY16;ID=intron:HG002_chrY_T0000502:3;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7465324	7466150	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG002_chrY_T0000502;gene_id=HG002_chrY_G0000127;Parent=HG002_chrY_T0000502;transcript_name=HG002_chrY_T0000502;gene_name=TTTY16;ID=exon:HG002_chrY_T0000502:4;Name=TTTY16;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	7365518	7432552	.	-	.	source_gene_common_name=RFTN1P1;source_gene=ENSG00000234795.11;gene_id=HG002_chrY_G0000128;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RFTN1P1;gene_sources=liftoff;ID=HG002_chrY_G0000128;Name=RFTN1P1
HG002_chrY	CAT	transcript	7365518	7432552	1000	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=HG002_chrY_T0000493;gene_id=HG002_chrY_G0000128;Parent=HG002_chrY_G0000128;transcript_name=HG002_chrY_T0000493;gene_name=RFTN1P1;ID=HG002_chrY_T0000493;Name=RFTN1P1
HG002_chrY	CAT	exon	7365518	7365630	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=HG002_chrY_T0000493;gene_id=HG002_chrY_G0000128;Parent=HG002_chrY_T0000493;transcript_name=HG002_chrY_T0000493;gene_name=RFTN1P1;ID=exon:HG002_chrY_T0000493:0;Name=RFTN1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7365631	7377713	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=HG002_chrY_T0000493;gene_id=HG002_chrY_G0000128;Parent=HG002_chrY_T0000493;transcript_name=HG002_chrY_T0000493;gene_name=RFTN1P1;ID=intron:HG002_chrY_T0000493:0;Name=RFTN1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7377714	7377916	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=HG002_chrY_T0000493;gene_id=HG002_chrY_G0000128;Parent=HG002_chrY_T0000493;transcript_name=HG002_chrY_T0000493;gene_name=RFTN1P1;ID=exon:HG002_chrY_T0000493:1;Name=RFTN1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7377917	7385314	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=HG002_chrY_T0000493;gene_id=HG002_chrY_G0000128;Parent=HG002_chrY_T0000493;transcript_name=HG002_chrY_T0000493;gene_name=RFTN1P1;ID=intron:HG002_chrY_T0000493:1;Name=RFTN1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7385315	7385698	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=HG002_chrY_T0000493;gene_id=HG002_chrY_G0000128;Parent=HG002_chrY_T0000493;transcript_name=HG002_chrY_T0000493;gene_name=RFTN1P1;ID=exon:HG002_chrY_T0000493:2;Name=RFTN1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7385699	7405217	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=HG002_chrY_T0000493;gene_id=HG002_chrY_G0000128;Parent=HG002_chrY_T0000493;transcript_name=HG002_chrY_T0000493;gene_name=RFTN1P1;ID=intron:HG002_chrY_T0000493:2;Name=RFTN1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7405218	7405326	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=HG002_chrY_T0000493;gene_id=HG002_chrY_G0000128;Parent=HG002_chrY_T0000493;transcript_name=HG002_chrY_T0000493;gene_name=RFTN1P1;ID=exon:HG002_chrY_T0000493:3;Name=RFTN1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7405327	7432365	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=HG002_chrY_T0000493;gene_id=HG002_chrY_G0000128;Parent=HG002_chrY_T0000493;transcript_name=HG002_chrY_T0000493;gene_name=RFTN1P1;ID=intron:HG002_chrY_T0000493:3;Name=RFTN1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7432366	7432552	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=HG002_chrY_T0000493;gene_id=HG002_chrY_G0000128;Parent=HG002_chrY_T0000493;transcript_name=HG002_chrY_T0000493;gene_name=RFTN1P1;ID=exon:HG002_chrY_T0000493:4;Name=RFTN1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	7443180	7446871	.	+	.	source_gene_common_name=ENSG00000298447;source_gene=ENSG00000298447.1;alternative_source_transcripts=ENST00000755553.1,ENST00000755553.1;gene_id=HG002_chrY_G0000129;gene_biotype=lncRNA;gene_name=ENSG00000298447;gene_sources=liftoff;ID=HG002_chrY_G0000129;Name=ENSG00000298447
HG002_chrY	CAT	transcript	7443180	7446871	1000	+	.	source_transcript=ENST00000755553.1;source_transcript_name=ENST00000755553;source_gene=ENSG00000298447.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298447.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755553.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298447;alternative_source_transcripts=ENST00000755553.1,ENST00000755553.1;transcript_id=HG002_chrY_T0000503;gene_id=HG002_chrY_G0000129;Parent=HG002_chrY_G0000129;transcript_name=HG002_chrY_T0000503;gene_name=ENSG00000298447;ID=HG002_chrY_T0000503;Name=ENSG00000298447
HG002_chrY	CAT	exon	7443180	7443474	.	+	.	source_transcript=ENST00000755553.1;source_transcript_name=ENST00000755553;source_gene=ENSG00000298447.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298447.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755553.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298447;alternative_source_transcripts=ENST00000755553.1,ENST00000755553.1;transcript_id=HG002_chrY_T0000503;gene_id=HG002_chrY_G0000129;Parent=HG002_chrY_T0000503;transcript_name=HG002_chrY_T0000503;gene_name=ENSG00000298447;ID=exon:HG002_chrY_T0000503:0;Name=ENSG00000298447;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7443475	7446124	.	+	.	source_transcript=ENST00000755553.1;source_transcript_name=ENST00000755553;source_gene=ENSG00000298447.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298447.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755553.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298447;alternative_source_transcripts=ENST00000755553.1,ENST00000755553.1;transcript_id=HG002_chrY_T0000503;gene_id=HG002_chrY_G0000129;Parent=HG002_chrY_T0000503;transcript_name=HG002_chrY_T0000503;gene_name=ENSG00000298447;ID=intron:HG002_chrY_T0000503:0;Name=ENSG00000298447;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7446125	7446871	.	+	.	source_transcript=ENST00000755553.1;source_transcript_name=ENST00000755553;source_gene=ENSG00000298447.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298447.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755553.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298447;alternative_source_transcripts=ENST00000755553.1,ENST00000755553.1;transcript_id=HG002_chrY_T0000503;gene_id=HG002_chrY_G0000129;Parent=HG002_chrY_T0000503;transcript_name=HG002_chrY_T0000503;gene_name=ENSG00000298447;ID=exon:HG002_chrY_T0000503:1;Name=ENSG00000298447;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	7459841	7470529	.	+	.	source_gene_common_name=TTTY12;source_gene=ENSG00000237048.5;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;gene_id=HG002_chrY_G0000130;gene_biotype=lncRNA;gene_name=TTTY12;gene_sources=liftoff;ID=HG002_chrY_G0000130;Name=TTTY12
HG002_chrY	CAT	transcript	7459841	7466528	1000	+	.	source_transcript=ENST00000413466.3;source_transcript_name=TTTY12-201;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413466.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000413466.3;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;transcript_id=HG002_chrY_T0000504;gene_id=HG002_chrY_G0000130;Parent=HG002_chrY_G0000130;transcript_name=HG002_chrY_T0000504;gene_name=TTTY12;ID=HG002_chrY_T0000504;Name=TTTY12
HG002_chrY	CAT	exon	7459841	7459907	.	+	.	source_transcript=ENST00000413466.3;source_transcript_name=TTTY12-201;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413466.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000413466.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;transcript_id=HG002_chrY_T0000504;gene_id=HG002_chrY_G0000130;Parent=HG002_chrY_T0000504;transcript_name=HG002_chrY_T0000504;gene_name=TTTY12;ID=exon:HG002_chrY_T0000504:0;Name=TTTY12;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7459908	7460768	.	+	.	source_transcript=ENST00000413466.3;source_transcript_name=TTTY12-201;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413466.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000413466.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;transcript_id=HG002_chrY_T0000504;gene_id=HG002_chrY_G0000130;Parent=HG002_chrY_T0000504;transcript_name=HG002_chrY_T0000504;gene_name=TTTY12;ID=intron:HG002_chrY_T0000504:0;Name=TTTY12;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7460769	7460924	.	+	.	source_transcript=ENST00000413466.3;source_transcript_name=TTTY12-201;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413466.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000413466.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;transcript_id=HG002_chrY_T0000504;gene_id=HG002_chrY_G0000130;Parent=HG002_chrY_T0000504;transcript_name=HG002_chrY_T0000504;gene_name=TTTY12;ID=exon:HG002_chrY_T0000504:1;Name=TTTY12;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7460925	7465705	.	+	.	source_transcript=ENST00000413466.3;source_transcript_name=TTTY12-201;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413466.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000413466.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;transcript_id=HG002_chrY_T0000504;gene_id=HG002_chrY_G0000130;Parent=HG002_chrY_T0000504;transcript_name=HG002_chrY_T0000504;gene_name=TTTY12;ID=intron:HG002_chrY_T0000504:1;Name=TTTY12;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7465706	7466528	.	+	.	source_transcript=ENST00000413466.3;source_transcript_name=TTTY12-201;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413466.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000413466.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;transcript_id=HG002_chrY_T0000504;gene_id=HG002_chrY_G0000130;Parent=HG002_chrY_T0000504;transcript_name=HG002_chrY_T0000504;gene_name=TTTY12;ID=exon:HG002_chrY_T0000504:2;Name=TTTY12;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	7459846	7466528	1000	+	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=HG002_chrY_T0000505;gene_id=HG002_chrY_G0000130;Parent=HG002_chrY_G0000130;transcript_name=HG002_chrY_T0000505;gene_name=TTTY12;ID=HG002_chrY_T0000505;Name=TTTY12
HG002_chrY	CAT	exon	7459846	7459907	.	+	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=HG002_chrY_T0000505;gene_id=HG002_chrY_G0000130;Parent=HG002_chrY_T0000505;transcript_name=HG002_chrY_T0000505;gene_name=TTTY12;ID=exon:HG002_chrY_T0000505:0;Name=TTTY12;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7459908	7460768	.	+	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=HG002_chrY_T0000505;gene_id=HG002_chrY_G0000130;Parent=HG002_chrY_T0000505;transcript_name=HG002_chrY_T0000505;gene_name=TTTY12;ID=intron:HG002_chrY_T0000505:0;Name=TTTY12;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7460769	7460924	.	+	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=HG002_chrY_T0000505;gene_id=HG002_chrY_G0000130;Parent=HG002_chrY_T0000505;transcript_name=HG002_chrY_T0000505;gene_name=TTTY12;ID=exon:HG002_chrY_T0000505:1;Name=TTTY12;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7460925	7461388	.	+	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=HG002_chrY_T0000505;gene_id=HG002_chrY_G0000130;Parent=HG002_chrY_T0000505;transcript_name=HG002_chrY_T0000505;gene_name=TTTY12;ID=intron:HG002_chrY_T0000505:1;Name=TTTY12;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7461389	7461470	.	+	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=HG002_chrY_T0000505;gene_id=HG002_chrY_G0000130;Parent=HG002_chrY_T0000505;transcript_name=HG002_chrY_T0000505;gene_name=TTTY12;ID=exon:HG002_chrY_T0000505:2;Name=TTTY12;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7461471	7465705	.	+	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=HG002_chrY_T0000505;gene_id=HG002_chrY_G0000130;Parent=HG002_chrY_T0000505;transcript_name=HG002_chrY_T0000505;gene_name=TTTY12;ID=intron:HG002_chrY_T0000505:2;Name=TTTY12;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7465706	7466528	.	+	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=HG002_chrY_T0000505;gene_id=HG002_chrY_G0000130;Parent=HG002_chrY_T0000505;transcript_name=HG002_chrY_T0000505;gene_name=TTTY12;ID=exon:HG002_chrY_T0000505:3;Name=TTTY12;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	7459846	7470529	1000	+	.	source_transcript=ENST00000755458.1;source_transcript_name=TTTY12-205;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755458.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000755458.1,ENST00000755458.1;transcript_id=HG002_chrY_T0000506;gene_id=HG002_chrY_G0000130;Parent=HG002_chrY_G0000130;transcript_name=HG002_chrY_T0000506;gene_name=TTTY12;ID=HG002_chrY_T0000506;Name=TTTY12
HG002_chrY	CAT	exon	7459846	7459907	.	+	.	source_transcript=ENST00000755458.1;source_transcript_name=TTTY12-205;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755458.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000755458.1,ENST00000755458.1;transcript_id=HG002_chrY_T0000506;gene_id=HG002_chrY_G0000130;Parent=HG002_chrY_T0000506;transcript_name=HG002_chrY_T0000506;gene_name=TTTY12;ID=exon:HG002_chrY_T0000506:0;Name=TTTY12;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7459908	7460768	.	+	.	source_transcript=ENST00000755458.1;source_transcript_name=TTTY12-205;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755458.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000755458.1,ENST00000755458.1;transcript_id=HG002_chrY_T0000506;gene_id=HG002_chrY_G0000130;Parent=HG002_chrY_T0000506;transcript_name=HG002_chrY_T0000506;gene_name=TTTY12;ID=intron:HG002_chrY_T0000506:0;Name=TTTY12;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7460769	7460924	.	+	.	source_transcript=ENST00000755458.1;source_transcript_name=TTTY12-205;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755458.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000755458.1,ENST00000755458.1;transcript_id=HG002_chrY_T0000506;gene_id=HG002_chrY_G0000130;Parent=HG002_chrY_T0000506;transcript_name=HG002_chrY_T0000506;gene_name=TTTY12;ID=exon:HG002_chrY_T0000506:1;Name=TTTY12;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7460925	7470423	.	+	.	source_transcript=ENST00000755458.1;source_transcript_name=TTTY12-205;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755458.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000755458.1,ENST00000755458.1;transcript_id=HG002_chrY_T0000506;gene_id=HG002_chrY_G0000130;Parent=HG002_chrY_T0000506;transcript_name=HG002_chrY_T0000506;gene_name=TTTY12;ID=intron:HG002_chrY_T0000506:1;Name=TTTY12;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7470424	7470529	.	+	.	source_transcript=ENST00000755458.1;source_transcript_name=TTTY12-205;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755458.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000755458.1,ENST00000755458.1;transcript_id=HG002_chrY_T0000506;gene_id=HG002_chrY_G0000130;Parent=HG002_chrY_T0000506;transcript_name=HG002_chrY_T0000506;gene_name=TTTY12;ID=exon:HG002_chrY_T0000506:2;Name=TTTY12;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	7460767	7466528	1000	+	.	source_transcript=ENST00000653671.1;source_transcript_name=TTTY12-203;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653671.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000653671.1,ENST00000653671.1;transcript_id=HG002_chrY_T0000507;gene_id=HG002_chrY_G0000130;Parent=HG002_chrY_G0000130;transcript_name=HG002_chrY_T0000507;gene_name=TTTY12;ID=HG002_chrY_T0000507;Name=TTTY12
HG002_chrY	CAT	exon	7460767	7460924	.	+	.	source_transcript=ENST00000653671.1;source_transcript_name=TTTY12-203;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653671.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000653671.1,ENST00000653671.1;transcript_id=HG002_chrY_T0000507;gene_id=HG002_chrY_G0000130;Parent=HG002_chrY_T0000507;transcript_name=HG002_chrY_T0000507;gene_name=TTTY12;ID=exon:HG002_chrY_T0000507:0;Name=TTTY12;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7460925	7461388	.	+	.	source_transcript=ENST00000653671.1;source_transcript_name=TTTY12-203;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653671.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000653671.1,ENST00000653671.1;transcript_id=HG002_chrY_T0000507;gene_id=HG002_chrY_G0000130;Parent=HG002_chrY_T0000507;transcript_name=HG002_chrY_T0000507;gene_name=TTTY12;ID=intron:HG002_chrY_T0000507:0;Name=TTTY12;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7461389	7461470	.	+	.	source_transcript=ENST00000653671.1;source_transcript_name=TTTY12-203;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653671.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000653671.1,ENST00000653671.1;transcript_id=HG002_chrY_T0000507;gene_id=HG002_chrY_G0000130;Parent=HG002_chrY_T0000507;transcript_name=HG002_chrY_T0000507;gene_name=TTTY12;ID=exon:HG002_chrY_T0000507:1;Name=TTTY12;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7461471	7466376	.	+	.	source_transcript=ENST00000653671.1;source_transcript_name=TTTY12-203;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653671.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000653671.1,ENST00000653671.1;transcript_id=HG002_chrY_T0000507;gene_id=HG002_chrY_G0000130;Parent=HG002_chrY_T0000507;transcript_name=HG002_chrY_T0000507;gene_name=TTTY12;ID=intron:HG002_chrY_T0000507:1;Name=TTTY12;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7466377	7466528	.	+	.	source_transcript=ENST00000653671.1;source_transcript_name=TTTY12-203;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653671.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000653671.1,ENST00000653671.1;transcript_id=HG002_chrY_T0000507;gene_id=HG002_chrY_G0000130;Parent=HG002_chrY_T0000507;transcript_name=HG002_chrY_T0000507;gene_name=TTTY12;ID=exon:HG002_chrY_T0000507:2;Name=TTTY12;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	7463658	7466528	1000	+	.	source_transcript=ENST00000664089.1;source_transcript_name=TTTY12-204;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664089.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000664089.1,ENST00000664089.1;transcript_id=HG002_chrY_T0000508;gene_id=HG002_chrY_G0000130;Parent=HG002_chrY_G0000130;transcript_name=HG002_chrY_T0000508;gene_name=TTTY12;ID=HG002_chrY_T0000508;Name=TTTY12
HG002_chrY	CAT	exon	7463658	7463700	.	+	.	source_transcript=ENST00000664089.1;source_transcript_name=TTTY12-204;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664089.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000664089.1,ENST00000664089.1;transcript_id=HG002_chrY_T0000508;gene_id=HG002_chrY_G0000130;Parent=HG002_chrY_T0000508;transcript_name=HG002_chrY_T0000508;gene_name=TTTY12;ID=exon:HG002_chrY_T0000508:0;Name=TTTY12;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7463701	7465705	.	+	.	source_transcript=ENST00000664089.1;source_transcript_name=TTTY12-204;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664089.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000664089.1,ENST00000664089.1;transcript_id=HG002_chrY_T0000508;gene_id=HG002_chrY_G0000130;Parent=HG002_chrY_T0000508;transcript_name=HG002_chrY_T0000508;gene_name=TTTY12;ID=intron:HG002_chrY_T0000508:0;Name=TTTY12;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7465706	7466528	.	+	.	source_transcript=ENST00000664089.1;source_transcript_name=TTTY12-204;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664089.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000664089.1,ENST00000664089.1;transcript_id=HG002_chrY_T0000508;gene_id=HG002_chrY_G0000130;Parent=HG002_chrY_T0000508;transcript_name=HG002_chrY_T0000508;gene_name=TTTY12;ID=exon:HG002_chrY_T0000508:1;Name=TTTY12;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	7501330	7502299	.	-	.	source_gene_common_name=ENSG00000278854;source_gene=ENSG00000278854.1;alternative_source_transcripts=ENST00000621243.1,ENST00000621243.1;gene_id=HG002_chrY_G0000131;gene_biotype=processed_pseudogene;gene_name=ENSG00000278854;gene_sources=liftoff;ID=HG002_chrY_G0000131;Name=ENSG00000278854
HG002_chrY	CAT	transcript	7501330	7502299	1000	-	.	source_transcript=ENST00000621243.1;source_transcript_name=ENST00000621243;source_gene=ENSG00000278854.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278854.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000621243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621243.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278854;alternative_source_transcripts=ENST00000621243.1,ENST00000621243.1;transcript_id=HG002_chrY_T0000509;gene_id=HG002_chrY_G0000131;Parent=HG002_chrY_G0000131;transcript_name=HG002_chrY_T0000509;gene_name=ENSG00000278854;ID=HG002_chrY_T0000509;Name=ENSG00000278854
HG002_chrY	CAT	exon	7501330	7501726	.	-	.	source_transcript=ENST00000621243.1;source_transcript_name=ENST00000621243;source_gene=ENSG00000278854.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278854.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000621243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621243.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278854;alternative_source_transcripts=ENST00000621243.1,ENST00000621243.1;transcript_id=HG002_chrY_T0000509;gene_id=HG002_chrY_G0000131;Parent=HG002_chrY_T0000509;transcript_name=HG002_chrY_T0000509;gene_name=ENSG00000278854;ID=exon:HG002_chrY_T0000509:0;Name=ENSG00000278854;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7501727	7502025	.	-	.	source_transcript=ENST00000621243.1;source_transcript_name=ENST00000621243;source_gene=ENSG00000278854.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278854.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000621243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621243.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278854;alternative_source_transcripts=ENST00000621243.1,ENST00000621243.1;transcript_id=HG002_chrY_T0000509;gene_id=HG002_chrY_G0000131;Parent=HG002_chrY_T0000509;transcript_name=HG002_chrY_T0000509;gene_name=ENSG00000278854;ID=intron:HG002_chrY_T0000509:0;Name=ENSG00000278854;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7502026	7502299	.	-	.	source_transcript=ENST00000621243.1;source_transcript_name=ENST00000621243;source_gene=ENSG00000278854.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278854.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000621243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621243.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278854;alternative_source_transcripts=ENST00000621243.1,ENST00000621243.1;transcript_id=HG002_chrY_T0000509;gene_id=HG002_chrY_G0000131;Parent=HG002_chrY_T0000509;transcript_name=HG002_chrY_T0000509;gene_name=ENSG00000278854;ID=exon:HG002_chrY_T0000509:1;Name=ENSG00000278854;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	7509529	7510719	.	-	.	source_gene_common_name=ZNF92P1Y;source_gene=ENSG00000215603.4;alternative_source_transcripts=ENST00000415010.1,ENST00000415010.1;gene_id=HG002_chrY_G0000132;gene_biotype=processed_pseudogene;gene_name=ZNF92P1Y;gene_sources=liftoff;ID=HG002_chrY_G0000132;Name=ZNF92P1Y
HG002_chrY	CAT	transcript	7509529	7510719	1000	-	.	source_transcript=ENST00000415010.1;source_transcript_name=ZNF92P1Y-201;source_gene=ENSG00000215603.4;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215603.4;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000415010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415010.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF92P1Y;alternative_source_transcripts=ENST00000415010.1,ENST00000415010.1;transcript_id=HG002_chrY_T0000510;gene_id=HG002_chrY_G0000132;Parent=HG002_chrY_G0000132;transcript_name=HG002_chrY_T0000510;gene_name=ZNF92P1Y;ID=HG002_chrY_T0000510;Name=ZNF92P1Y
HG002_chrY	CAT	exon	7509529	7510719	.	-	.	source_transcript=ENST00000415010.1;source_transcript_name=ZNF92P1Y-201;source_gene=ENSG00000215603.4;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215603.4;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000415010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415010.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF92P1Y;alternative_source_transcripts=ENST00000415010.1,ENST00000415010.1;transcript_id=HG002_chrY_T0000510;gene_id=HG002_chrY_G0000132;Parent=HG002_chrY_T0000510;transcript_name=HG002_chrY_T0000510;gene_name=ZNF92P1Y;ID=exon:HG002_chrY_T0000510:0;Name=ZNF92P1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	7561383	7563150	.	-	.	source_gene_common_name=ENSG00000273863;source_gene=ENSG00000273863.1;alternative_source_transcripts=ENST00000614118.1,ENST00000614118.1;gene_id=HG002_chrY_G0000133;gene_biotype=processed_pseudogene;gene_name=ENSG00000273863;gene_sources=liftoff;ID=HG002_chrY_G0000133;Name=ENSG00000273863
HG002_chrY	CAT	transcript	7561383	7563150	1000	-	.	source_transcript=ENST00000614118.1;source_transcript_name=ENST00000614118;source_gene=ENSG00000273863.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273863.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000614118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614118.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273863;alternative_source_transcripts=ENST00000614118.1,ENST00000614118.1;transcript_id=HG002_chrY_T0000511;gene_id=HG002_chrY_G0000133;Parent=HG002_chrY_G0000133;transcript_name=HG002_chrY_T0000511;gene_name=ENSG00000273863;ID=HG002_chrY_T0000511;Name=ENSG00000273863
HG002_chrY	CAT	exon	7561383	7561905	.	-	.	source_transcript=ENST00000614118.1;source_transcript_name=ENST00000614118;source_gene=ENSG00000273863.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273863.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000614118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614118.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273863;alternative_source_transcripts=ENST00000614118.1,ENST00000614118.1;transcript_id=HG002_chrY_T0000511;gene_id=HG002_chrY_G0000133;Parent=HG002_chrY_T0000511;transcript_name=HG002_chrY_T0000511;gene_name=ENSG00000273863;ID=exon:HG002_chrY_T0000511:0;Name=ENSG00000273863;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7561906	7562960	.	-	.	source_transcript=ENST00000614118.1;source_transcript_name=ENST00000614118;source_gene=ENSG00000273863.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273863.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000614118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614118.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273863;alternative_source_transcripts=ENST00000614118.1,ENST00000614118.1;transcript_id=HG002_chrY_T0000511;gene_id=HG002_chrY_G0000133;Parent=HG002_chrY_T0000511;transcript_name=HG002_chrY_T0000511;gene_name=ENSG00000273863;ID=intron:HG002_chrY_T0000511:0;Name=ENSG00000273863;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7562961	7563150	.	-	.	source_transcript=ENST00000614118.1;source_transcript_name=ENST00000614118;source_gene=ENSG00000273863.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273863.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000614118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614118.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273863;alternative_source_transcripts=ENST00000614118.1,ENST00000614118.1;transcript_id=HG002_chrY_T0000511;gene_id=HG002_chrY_G0000133;Parent=HG002_chrY_T0000511;transcript_name=HG002_chrY_T0000511;gene_name=ENSG00000273863;ID=exon:HG002_chrY_T0000511:1;Name=ENSG00000273863;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	7569269	7569937	.	-	.	source_gene_common_name=ZNF736P8Y;source_gene=ENSG00000244246.1;alternative_source_transcripts=ENST00000451913.1,ENST00000451913.1;gene_id=HG002_chrY_G0000134;gene_biotype=processed_pseudogene;gene_name=ZNF736P8Y;gene_sources=liftoff;ID=HG002_chrY_G0000134;Name=ZNF736P8Y
HG002_chrY	CAT	transcript	7569269	7569937	1000	-	.	source_transcript=ENST00000451913.1;source_transcript_name=ZNF736P8Y-201;source_gene=ENSG00000244246.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000244246.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000451913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451913.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P8Y;alternative_source_transcripts=ENST00000451913.1,ENST00000451913.1;transcript_id=HG002_chrY_T0000512;gene_id=HG002_chrY_G0000134;Parent=HG002_chrY_G0000134;transcript_name=HG002_chrY_T0000512;gene_name=ZNF736P8Y;ID=HG002_chrY_T0000512;Name=ZNF736P8Y
HG002_chrY	CAT	exon	7569269	7569937	.	-	.	source_transcript=ENST00000451913.1;source_transcript_name=ZNF736P8Y-201;source_gene=ENSG00000244246.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000244246.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000451913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P8Y;alternative_source_transcripts=ENST00000451913.1,ENST00000451913.1;transcript_id=HG002_chrY_T0000512;gene_id=HG002_chrY_G0000134;Parent=HG002_chrY_T0000512;transcript_name=HG002_chrY_T0000512;gene_name=ZNF736P8Y;ID=exon:HG002_chrY_T0000512:0;Name=ZNF736P8Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	7588844	7593487	.	-	.	source_gene_common_name=BPY2DP;source_gene=ENSG00000229745.1;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;gene_id=HG002_chrY_G0000135;gene_biotype=unprocessed_pseudogene;gene_name=BPY2DP;gene_sources=liftoff;ID=HG002_chrY_G0000135;Name=BPY2DP
HG002_chrY	CAT	transcript	7588844	7593487	1000	-	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=HG002_chrY_T0000513;gene_id=HG002_chrY_G0000135;Parent=HG002_chrY_G0000135;transcript_name=HG002_chrY_T0000513;gene_name=BPY2DP;ID=HG002_chrY_T0000513;Name=BPY2DP
HG002_chrY	CAT	exon	7588844	7588862	.	-	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=HG002_chrY_T0000513;gene_id=HG002_chrY_G0000135;Parent=HG002_chrY_T0000513;transcript_name=HG002_chrY_T0000513;gene_name=BPY2DP;ID=exon:HG002_chrY_T0000513:0;Name=BPY2DP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7588863	7589540	.	-	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=HG002_chrY_T0000513;gene_id=HG002_chrY_G0000135;Parent=HG002_chrY_T0000513;transcript_name=HG002_chrY_T0000513;gene_name=BPY2DP;ID=intron:HG002_chrY_T0000513:0;Name=BPY2DP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7589541	7589646	.	-	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=HG002_chrY_T0000513;gene_id=HG002_chrY_G0000135;Parent=HG002_chrY_T0000513;transcript_name=HG002_chrY_T0000513;gene_name=BPY2DP;ID=exon:HG002_chrY_T0000513:1;Name=BPY2DP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7589647	7592481	.	-	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=HG002_chrY_T0000513;gene_id=HG002_chrY_G0000135;Parent=HG002_chrY_T0000513;transcript_name=HG002_chrY_T0000513;gene_name=BPY2DP;ID=intron:HG002_chrY_T0000513:1;Name=BPY2DP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7592482	7592551	.	-	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=HG002_chrY_T0000513;gene_id=HG002_chrY_G0000135;Parent=HG002_chrY_T0000513;transcript_name=HG002_chrY_T0000513;gene_name=BPY2DP;ID=exon:HG002_chrY_T0000513:2;Name=BPY2DP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7592552	7593417	.	-	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=HG002_chrY_T0000513;gene_id=HG002_chrY_G0000135;Parent=HG002_chrY_T0000513;transcript_name=HG002_chrY_T0000513;gene_name=BPY2DP;ID=intron:HG002_chrY_T0000513:2;Name=BPY2DP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7593418	7593487	.	-	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=HG002_chrY_T0000513;gene_id=HG002_chrY_G0000135;Parent=HG002_chrY_T0000513;transcript_name=HG002_chrY_T0000513;gene_name=BPY2DP;ID=exon:HG002_chrY_T0000513:3;Name=BPY2DP;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	7646842	7647661	.	-	.	source_gene_common_name=ZNF736P7Y;source_gene=ENSG00000241200.1;alternative_source_transcripts=ENST00000425158.1,ENST00000425158.1;gene_id=HG002_chrY_G0000136;gene_biotype=processed_pseudogene;gene_name=ZNF736P7Y;gene_sources=liftoff;ID=HG002_chrY_G0000136;Name=ZNF736P7Y
HG002_chrY	CAT	transcript	7646842	7647661	1000	-	.	source_transcript=ENST00000425158.1;source_transcript_name=ZNF736P7Y-201;source_gene=ENSG00000241200.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000241200.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425158.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P7Y;alternative_source_transcripts=ENST00000425158.1,ENST00000425158.1;transcript_id=HG002_chrY_T0000514;gene_id=HG002_chrY_G0000136;Parent=HG002_chrY_G0000136;transcript_name=HG002_chrY_T0000514;gene_name=ZNF736P7Y;ID=HG002_chrY_T0000514;Name=ZNF736P7Y
HG002_chrY	CAT	exon	7646842	7647661	.	-	.	source_transcript=ENST00000425158.1;source_transcript_name=ZNF736P7Y-201;source_gene=ENSG00000241200.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000241200.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P7Y;alternative_source_transcripts=ENST00000425158.1,ENST00000425158.1;transcript_id=HG002_chrY_T0000514;gene_id=HG002_chrY_G0000136;Parent=HG002_chrY_T0000514;transcript_name=HG002_chrY_T0000514;gene_name=ZNF736P7Y;ID=exon:HG002_chrY_T0000514:0;Name=ZNF736P7Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	7724305	7782154	.	-	.	source_gene_common_name=ENSG00000293305;source_gene=ENSG00000293305.2;gene_id=HG002_chrY_G0000137;gene_biotype=lncRNA;gene_name=ENSG00000293305;gene_sources=liftoff;ID=HG002_chrY_G0000137;Name=ENSG00000293305
HG002_chrY	CAT	transcript	7724305	7782154	1000	-	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000515;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_G0000137;transcript_name=HG002_chrY_T0000515;gene_name=ENSG00000293305;ID=HG002_chrY_T0000515;Name=ENSG00000293305
HG002_chrY	CAT	exon	7724305	7725977	.	-	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000515;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000515;transcript_name=HG002_chrY_T0000515;gene_name=ENSG00000293305;ID=exon:HG002_chrY_T0000515:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7725978	7732850	.	-	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000515;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000515;transcript_name=HG002_chrY_T0000515;gene_name=ENSG00000293305;ID=intron:HG002_chrY_T0000515:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7732851	7733035	.	-	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000515;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000515;transcript_name=HG002_chrY_T0000515;gene_name=ENSG00000293305;ID=exon:HG002_chrY_T0000515:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7733036	7767710	.	-	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000515;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000515;transcript_name=HG002_chrY_T0000515;gene_name=ENSG00000293305;ID=intron:HG002_chrY_T0000515:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7767711	7767825	.	-	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000515;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000515;transcript_name=HG002_chrY_T0000515;gene_name=ENSG00000293305;ID=exon:HG002_chrY_T0000515:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7767826	7781944	.	-	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000515;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000515;transcript_name=HG002_chrY_T0000515;gene_name=ENSG00000293305;ID=intron:HG002_chrY_T0000515:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7781945	7782154	.	-	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000515;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000515;transcript_name=HG002_chrY_T0000515;gene_name=ENSG00000293305;ID=exon:HG002_chrY_T0000515:3;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	7725732	7782153	1000	-	.	source_transcript=ENST00000726686.1;source_transcript_name=ENST00000726686;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726686.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000517;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_G0000137;transcript_name=HG002_chrY_T0000517;gene_name=ENSG00000293305;ID=HG002_chrY_T0000517;Name=ENSG00000293305
HG002_chrY	CAT	exon	7725732	7725977	.	-	.	source_transcript=ENST00000726686.1;source_transcript_name=ENST00000726686;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726686.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000517;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000517;transcript_name=HG002_chrY_T0000517;gene_name=ENSG00000293305;ID=exon:HG002_chrY_T0000517:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7725978	7767710	.	-	.	source_transcript=ENST00000726686.1;source_transcript_name=ENST00000726686;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726686.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000517;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000517;transcript_name=HG002_chrY_T0000517;gene_name=ENSG00000293305;ID=intron:HG002_chrY_T0000517:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7767711	7767825	.	-	.	source_transcript=ENST00000726686.1;source_transcript_name=ENST00000726686;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726686.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000517;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000517;transcript_name=HG002_chrY_T0000517;gene_name=ENSG00000293305;ID=exon:HG002_chrY_T0000517:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7767826	7781918	.	-	.	source_transcript=ENST00000726686.1;source_transcript_name=ENST00000726686;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726686.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000517;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000517;transcript_name=HG002_chrY_T0000517;gene_name=ENSG00000293305;ID=intron:HG002_chrY_T0000517:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7781919	7782153	.	-	.	source_transcript=ENST00000726686.1;source_transcript_name=ENST00000726686;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726686.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000517;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000517;transcript_name=HG002_chrY_T0000517;gene_name=ENSG00000293305;ID=exon:HG002_chrY_T0000517:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	7725737	7782104	1000	-	.	source_transcript=ENST00000726688.1;source_transcript_name=ENST00000726688;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726688.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000518;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_G0000137;transcript_name=HG002_chrY_T0000518;gene_name=ENSG00000293305;ID=HG002_chrY_T0000518;Name=ENSG00000293305
HG002_chrY	CAT	exon	7725737	7725977	.	-	.	source_transcript=ENST00000726688.1;source_transcript_name=ENST00000726688;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726688.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000518;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000518;transcript_name=HG002_chrY_T0000518;gene_name=ENSG00000293305;ID=exon:HG002_chrY_T0000518:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7725978	7732850	.	-	.	source_transcript=ENST00000726688.1;source_transcript_name=ENST00000726688;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726688.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000518;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000518;transcript_name=HG002_chrY_T0000518;gene_name=ENSG00000293305;ID=intron:HG002_chrY_T0000518:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7732851	7733035	.	-	.	source_transcript=ENST00000726688.1;source_transcript_name=ENST00000726688;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726688.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000518;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000518;transcript_name=HG002_chrY_T0000518;gene_name=ENSG00000293305;ID=exon:HG002_chrY_T0000518:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7733036	7781918	.	-	.	source_transcript=ENST00000726688.1;source_transcript_name=ENST00000726688;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726688.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000518;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000518;transcript_name=HG002_chrY_T0000518;gene_name=ENSG00000293305;ID=intron:HG002_chrY_T0000518:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7781919	7782104	.	-	.	source_transcript=ENST00000726688.1;source_transcript_name=ENST00000726688;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726688.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000518;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000518;transcript_name=HG002_chrY_T0000518;gene_name=ENSG00000293305;ID=exon:HG002_chrY_T0000518:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	7725737	7782142	1000	-	.	source_transcript=ENST00000726687.1;source_transcript_name=ENST00000726687;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726687.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000519;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_G0000137;transcript_name=HG002_chrY_T0000519;gene_name=ENSG00000293305;ID=HG002_chrY_T0000519;Name=ENSG00000293305
HG002_chrY	CAT	exon	7725737	7725977	.	-	.	source_transcript=ENST00000726687.1;source_transcript_name=ENST00000726687;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726687.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000519;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000519;transcript_name=HG002_chrY_T0000519;gene_name=ENSG00000293305;ID=exon:HG002_chrY_T0000519:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7725978	7781918	.	-	.	source_transcript=ENST00000726687.1;source_transcript_name=ENST00000726687;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726687.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000519;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000519;transcript_name=HG002_chrY_T0000519;gene_name=ENSG00000293305;ID=intron:HG002_chrY_T0000519:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7781919	7782142	.	-	.	source_transcript=ENST00000726687.1;source_transcript_name=ENST00000726687;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726687.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000519;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000519;transcript_name=HG002_chrY_T0000519;gene_name=ENSG00000293305;ID=exon:HG002_chrY_T0000519:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	7725737	7782195	1000	-	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000520;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_G0000137;transcript_name=HG002_chrY_T0000520;gene_name=ENSG00000293305;ID=HG002_chrY_T0000520;Name=ENSG00000293305
HG002_chrY	CAT	exon	7725737	7725977	.	-	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000520;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000520;transcript_name=HG002_chrY_T0000520;gene_name=ENSG00000293305;ID=exon:HG002_chrY_T0000520:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7725978	7732850	.	-	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000520;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000520;transcript_name=HG002_chrY_T0000520;gene_name=ENSG00000293305;ID=intron:HG002_chrY_T0000520:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7732851	7733035	.	-	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000520;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000520;transcript_name=HG002_chrY_T0000520;gene_name=ENSG00000293305;ID=exon:HG002_chrY_T0000520:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7733036	7767710	.	-	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000520;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000520;transcript_name=HG002_chrY_T0000520;gene_name=ENSG00000293305;ID=intron:HG002_chrY_T0000520:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7767711	7767825	.	-	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000520;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000520;transcript_name=HG002_chrY_T0000520;gene_name=ENSG00000293305;ID=exon:HG002_chrY_T0000520:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7767826	7781918	.	-	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000520;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000520;transcript_name=HG002_chrY_T0000520;gene_name=ENSG00000293305;ID=intron:HG002_chrY_T0000520:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7781919	7782195	.	-	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000520;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000520;transcript_name=HG002_chrY_T0000520;gene_name=ENSG00000293305;ID=exon:HG002_chrY_T0000520:3;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	7725737	7747932	1000	-	.	source_transcript=ENST00000726691.1;source_transcript_name=ENST00000726691;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726691.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000521;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_G0000137;transcript_name=HG002_chrY_T0000521;gene_name=ENSG00000293305;ID=HG002_chrY_T0000521;Name=ENSG00000293305
HG002_chrY	CAT	exon	7725737	7725977	.	-	.	source_transcript=ENST00000726691.1;source_transcript_name=ENST00000726691;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726691.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000521;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000521;transcript_name=HG002_chrY_T0000521;gene_name=ENSG00000293305;ID=exon:HG002_chrY_T0000521:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7725978	7732912	.	-	.	source_transcript=ENST00000726691.1;source_transcript_name=ENST00000726691;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726691.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000521;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000521;transcript_name=HG002_chrY_T0000521;gene_name=ENSG00000293305;ID=intron:HG002_chrY_T0000521:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7732913	7733035	.	-	.	source_transcript=ENST00000726691.1;source_transcript_name=ENST00000726691;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726691.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000521;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000521;transcript_name=HG002_chrY_T0000521;gene_name=ENSG00000293305;ID=exon:HG002_chrY_T0000521:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7733036	7747893	.	-	.	source_transcript=ENST00000726691.1;source_transcript_name=ENST00000726691;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726691.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000521;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000521;transcript_name=HG002_chrY_T0000521;gene_name=ENSG00000293305;ID=intron:HG002_chrY_T0000521:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7747894	7747932	.	-	.	source_transcript=ENST00000726691.1;source_transcript_name=ENST00000726691;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726691.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000521;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000521;transcript_name=HG002_chrY_T0000521;gene_name=ENSG00000293305;ID=exon:HG002_chrY_T0000521:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	7725740	7747930	1000	-	.	source_transcript=ENST00000726692.1;source_transcript_name=ENST00000726692;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726692.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000522;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_G0000137;transcript_name=HG002_chrY_T0000522;gene_name=ENSG00000293305;ID=HG002_chrY_T0000522;Name=ENSG00000293305
HG002_chrY	CAT	exon	7725740	7725977	.	-	.	source_transcript=ENST00000726692.1;source_transcript_name=ENST00000726692;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726692.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000522;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000522;transcript_name=HG002_chrY_T0000522;gene_name=ENSG00000293305;ID=exon:HG002_chrY_T0000522:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7725978	7732850	.	-	.	source_transcript=ENST00000726692.1;source_transcript_name=ENST00000726692;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726692.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000522;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000522;transcript_name=HG002_chrY_T0000522;gene_name=ENSG00000293305;ID=intron:HG002_chrY_T0000522:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7732851	7733035	.	-	.	source_transcript=ENST00000726692.1;source_transcript_name=ENST00000726692;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726692.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000522;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000522;transcript_name=HG002_chrY_T0000522;gene_name=ENSG00000293305;ID=exon:HG002_chrY_T0000522:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7733036	7747893	.	-	.	source_transcript=ENST00000726692.1;source_transcript_name=ENST00000726692;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726692.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000522;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000522;transcript_name=HG002_chrY_T0000522;gene_name=ENSG00000293305;ID=intron:HG002_chrY_T0000522:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7747894	7747930	.	-	.	source_transcript=ENST00000726692.1;source_transcript_name=ENST00000726692;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726692.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000522;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000522;transcript_name=HG002_chrY_T0000522;gene_name=ENSG00000293305;ID=exon:HG002_chrY_T0000522:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	7725741	7782104	1000	-	.	source_transcript=ENST00000726689.1;source_transcript_name=ENST00000726689;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726689.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000523;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_G0000137;transcript_name=HG002_chrY_T0000523;gene_name=ENSG00000293305;ID=HG002_chrY_T0000523;Name=ENSG00000293305
HG002_chrY	CAT	exon	7725741	7725977	.	-	.	source_transcript=ENST00000726689.1;source_transcript_name=ENST00000726689;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726689.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000523;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000523;transcript_name=HG002_chrY_T0000523;gene_name=ENSG00000293305;ID=exon:HG002_chrY_T0000523:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7725978	7732912	.	-	.	source_transcript=ENST00000726689.1;source_transcript_name=ENST00000726689;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726689.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000523;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000523;transcript_name=HG002_chrY_T0000523;gene_name=ENSG00000293305;ID=intron:HG002_chrY_T0000523:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7732913	7733035	.	-	.	source_transcript=ENST00000726689.1;source_transcript_name=ENST00000726689;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726689.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000523;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000523;transcript_name=HG002_chrY_T0000523;gene_name=ENSG00000293305;ID=exon:HG002_chrY_T0000523:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7733036	7781918	.	-	.	source_transcript=ENST00000726689.1;source_transcript_name=ENST00000726689;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726689.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000523;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000523;transcript_name=HG002_chrY_T0000523;gene_name=ENSG00000293305;ID=intron:HG002_chrY_T0000523:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7781919	7782104	.	-	.	source_transcript=ENST00000726689.1;source_transcript_name=ENST00000726689;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726689.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000523;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000523;transcript_name=HG002_chrY_T0000523;gene_name=ENSG00000293305;ID=exon:HG002_chrY_T0000523:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	7725741	7747986	1000	-	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000524;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_G0000137;transcript_name=HG002_chrY_T0000524;gene_name=ENSG00000293305;ID=HG002_chrY_T0000524;Name=ENSG00000293305
HG002_chrY	CAT	exon	7725741	7725977	.	-	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000524;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000524;transcript_name=HG002_chrY_T0000524;gene_name=ENSG00000293305;ID=exon:HG002_chrY_T0000524:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7725978	7732850	.	-	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000524;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000524;transcript_name=HG002_chrY_T0000524;gene_name=ENSG00000293305;ID=intron:HG002_chrY_T0000524:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7732851	7733035	.	-	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000524;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000524;transcript_name=HG002_chrY_T0000524;gene_name=ENSG00000293305;ID=exon:HG002_chrY_T0000524:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7733036	7747458	.	-	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000524;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000524;transcript_name=HG002_chrY_T0000524;gene_name=ENSG00000293305;ID=intron:HG002_chrY_T0000524:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7747459	7747609	.	-	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000524;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000524;transcript_name=HG002_chrY_T0000524;gene_name=ENSG00000293305;ID=exon:HG002_chrY_T0000524:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7747610	7747893	.	-	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000524;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000524;transcript_name=HG002_chrY_T0000524;gene_name=ENSG00000293305;ID=intron:HG002_chrY_T0000524:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7747894	7747986	.	-	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG002_chrY_T0000524;gene_id=HG002_chrY_G0000137;Parent=HG002_chrY_T0000524;transcript_name=HG002_chrY_T0000524;gene_name=ENSG00000293305;ID=exon:HG002_chrY_T0000524:3;Name=ENSG00000293305;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	7724756	7726583	.	-	.	source_gene_common_name=ZNF736P9Y;source_gene=ENSG00000239893.4;gene_id=HG002_chrY_G0000138;gene_biotype=transcribed_processed_pseudogene;gene_name=ZNF736P9Y;gene_sources=liftoff;ID=HG002_chrY_G0000138;Name=ZNF736P9Y
HG002_chrY	CAT	transcript	7724756	7726583	1000	-	.	source_transcript=ENST00000439586.1;source_transcript_name=ZNF736P9Y-201;source_gene=ENSG00000239893.4;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239893.4;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000439586.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439586.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P9Y;transcript_id=HG002_chrY_T0000516;gene_id=HG002_chrY_G0000138;Parent=HG002_chrY_G0000138;transcript_name=HG002_chrY_T0000516;gene_name=ZNF736P9Y;ID=HG002_chrY_T0000516;Name=ZNF736P9Y
HG002_chrY	CAT	exon	7724756	7725978	.	-	.	source_transcript=ENST00000439586.1;source_transcript_name=ZNF736P9Y-201;source_gene=ENSG00000239893.4;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239893.4;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000439586.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439586.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P9Y;transcript_id=HG002_chrY_T0000516;gene_id=HG002_chrY_G0000138;Parent=HG002_chrY_T0000516;transcript_name=HG002_chrY_T0000516;gene_name=ZNF736P9Y;ID=exon:HG002_chrY_T0000516:0;Name=ZNF736P9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7725979	7726461	.	-	.	source_transcript=ENST00000439586.1;source_transcript_name=ZNF736P9Y-201;source_gene=ENSG00000239893.4;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239893.4;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000439586.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439586.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P9Y;transcript_id=HG002_chrY_T0000516;gene_id=HG002_chrY_G0000138;Parent=HG002_chrY_T0000516;transcript_name=HG002_chrY_T0000516;gene_name=ZNF736P9Y;ID=intron:HG002_chrY_T0000516:0;Name=ZNF736P9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7726462	7726583	.	-	.	source_transcript=ENST00000439586.1;source_transcript_name=ZNF736P9Y-201;source_gene=ENSG00000239893.4;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239893.4;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000439586.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439586.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P9Y;transcript_id=HG002_chrY_T0000516;gene_id=HG002_chrY_G0000138;Parent=HG002_chrY_T0000516;transcript_name=HG002_chrY_T0000516;gene_name=ZNF736P9Y;ID=exon:HG002_chrY_T0000516:1;Name=ZNF736P9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	7782991	7800064	.	+	.	source_gene_common_name=RBMY2JP;source_gene=ENSG00000227204.1;gene_id=HG002_chrY_G0000139;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2JP;gene_sources=liftoff;ID=HG002_chrY_G0000139;Name=RBMY2JP
HG002_chrY	CAT	transcript	7782991	7800064	1000	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG002_chrY_T0000525;gene_id=HG002_chrY_G0000139;Parent=HG002_chrY_G0000139;transcript_name=HG002_chrY_T0000525;gene_name=RBMY2JP;ID=HG002_chrY_T0000525;Name=RBMY2JP
HG002_chrY	CAT	exon	7782991	7783099	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG002_chrY_T0000525;gene_id=HG002_chrY_G0000139;Parent=HG002_chrY_T0000525;transcript_name=HG002_chrY_T0000525;gene_name=RBMY2JP;ID=exon:HG002_chrY_T0000525:0;Name=RBMY2JP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7783100	7785093	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG002_chrY_T0000525;gene_id=HG002_chrY_G0000139;Parent=HG002_chrY_T0000525;transcript_name=HG002_chrY_T0000525;gene_name=RBMY2JP;ID=intron:HG002_chrY_T0000525:0;Name=RBMY2JP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7785094	7785096	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG002_chrY_T0000525;gene_id=HG002_chrY_G0000139;Parent=HG002_chrY_T0000525;transcript_name=HG002_chrY_T0000525;gene_name=RBMY2JP;ID=exon:HG002_chrY_T0000525:1;Name=RBMY2JP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7785097	7787508	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG002_chrY_T0000525;gene_id=HG002_chrY_G0000139;Parent=HG002_chrY_T0000525;transcript_name=HG002_chrY_T0000525;gene_name=RBMY2JP;ID=intron:HG002_chrY_T0000525:1;Name=RBMY2JP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7787509	7787686	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG002_chrY_T0000525;gene_id=HG002_chrY_G0000139;Parent=HG002_chrY_T0000525;transcript_name=HG002_chrY_T0000525;gene_name=RBMY2JP;ID=exon:HG002_chrY_T0000525:2;Name=RBMY2JP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7787687	7789545	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG002_chrY_T0000525;gene_id=HG002_chrY_G0000139;Parent=HG002_chrY_T0000525;transcript_name=HG002_chrY_T0000525;gene_name=RBMY2JP;ID=intron:HG002_chrY_T0000525:2;Name=RBMY2JP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7789546	7789661	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG002_chrY_T0000525;gene_id=HG002_chrY_G0000139;Parent=HG002_chrY_T0000525;transcript_name=HG002_chrY_T0000525;gene_name=RBMY2JP;ID=exon:HG002_chrY_T0000525:3;Name=RBMY2JP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7789662	7789986	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG002_chrY_T0000525;gene_id=HG002_chrY_G0000139;Parent=HG002_chrY_T0000525;transcript_name=HG002_chrY_T0000525;gene_name=RBMY2JP;ID=intron:HG002_chrY_T0000525:3;Name=RBMY2JP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7789987	7790023	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG002_chrY_T0000525;gene_id=HG002_chrY_G0000139;Parent=HG002_chrY_T0000525;transcript_name=HG002_chrY_T0000525;gene_name=RBMY2JP;ID=exon:HG002_chrY_T0000525:4;Name=RBMY2JP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7790024	7798086	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG002_chrY_T0000525;gene_id=HG002_chrY_G0000139;Parent=HG002_chrY_T0000525;transcript_name=HG002_chrY_T0000525;gene_name=RBMY2JP;ID=intron:HG002_chrY_T0000525:4;Name=RBMY2JP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7798087	7798199	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG002_chrY_T0000525;gene_id=HG002_chrY_G0000139;Parent=HG002_chrY_T0000525;transcript_name=HG002_chrY_T0000525;gene_name=RBMY2JP;ID=exon:HG002_chrY_T0000525:5;Name=RBMY2JP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7798200	7799068	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG002_chrY_T0000525;gene_id=HG002_chrY_G0000139;Parent=HG002_chrY_T0000525;transcript_name=HG002_chrY_T0000525;gene_name=RBMY2JP;ID=intron:HG002_chrY_T0000525:5;Name=RBMY2JP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7799069	7799175	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG002_chrY_T0000525;gene_id=HG002_chrY_G0000139;Parent=HG002_chrY_T0000525;transcript_name=HG002_chrY_T0000525;gene_name=RBMY2JP;ID=exon:HG002_chrY_T0000525:6;Name=RBMY2JP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7799176	7799254	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG002_chrY_T0000525;gene_id=HG002_chrY_G0000139;Parent=HG002_chrY_T0000525;transcript_name=HG002_chrY_T0000525;gene_name=RBMY2JP;ID=intron:HG002_chrY_T0000525:6;Name=RBMY2JP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7799255	7799348	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG002_chrY_T0000525;gene_id=HG002_chrY_G0000139;Parent=HG002_chrY_T0000525;transcript_name=HG002_chrY_T0000525;gene_name=RBMY2JP;ID=exon:HG002_chrY_T0000525:7;Name=RBMY2JP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7799349	7799762	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG002_chrY_T0000525;gene_id=HG002_chrY_G0000139;Parent=HG002_chrY_T0000525;transcript_name=HG002_chrY_T0000525;gene_name=RBMY2JP;ID=intron:HG002_chrY_T0000525:7;Name=RBMY2JP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7799763	7800064	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG002_chrY_T0000525;gene_id=HG002_chrY_G0000139;Parent=HG002_chrY_T0000525;transcript_name=HG002_chrY_T0000525;gene_name=RBMY2JP;ID=exon:HG002_chrY_T0000525:8;Name=RBMY2JP;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	7784300	7799575	.	+	.	source_gene_common_name=ENSG00000299821;source_gene=ENSG00000299821.1;gene_id=HG002_chrY_G0000140;gene_biotype=lncRNA;gene_name=ENSG00000299821;gene_sources=liftoff;ID=HG002_chrY_G0000140;Name=ENSG00000299821
HG002_chrY	CAT	transcript	7784300	7799575	1000	+	.	source_transcript=ENST00000766670.1;source_transcript_name=ENST00000766670;source_gene=ENSG00000299821.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299821.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766670.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299821;transcript_id=HG002_chrY_T0000526;gene_id=HG002_chrY_G0000140;Parent=HG002_chrY_G0000140;transcript_name=HG002_chrY_T0000526;gene_name=ENSG00000299821;ID=HG002_chrY_T0000526;Name=ENSG00000299821
HG002_chrY	CAT	exon	7784300	7784949	.	+	.	source_transcript=ENST00000766670.1;source_transcript_name=ENST00000766670;source_gene=ENSG00000299821.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299821.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766670.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299821;transcript_id=HG002_chrY_T0000526;gene_id=HG002_chrY_G0000140;Parent=HG002_chrY_T0000526;transcript_name=HG002_chrY_T0000526;gene_name=ENSG00000299821;ID=exon:HG002_chrY_T0000526:0;Name=ENSG00000299821;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7784950	7796660	.	+	.	source_transcript=ENST00000766670.1;source_transcript_name=ENST00000766670;source_gene=ENSG00000299821.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299821.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766670.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299821;transcript_id=HG002_chrY_T0000526;gene_id=HG002_chrY_G0000140;Parent=HG002_chrY_T0000526;transcript_name=HG002_chrY_T0000526;gene_name=ENSG00000299821;ID=intron:HG002_chrY_T0000526:0;Name=ENSG00000299821;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7796661	7796821	.	+	.	source_transcript=ENST00000766670.1;source_transcript_name=ENST00000766670;source_gene=ENSG00000299821.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299821.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766670.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299821;transcript_id=HG002_chrY_T0000526;gene_id=HG002_chrY_G0000140;Parent=HG002_chrY_T0000526;transcript_name=HG002_chrY_T0000526;gene_name=ENSG00000299821;ID=exon:HG002_chrY_T0000526:1;Name=ENSG00000299821;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7796822	7799259	.	+	.	source_transcript=ENST00000766670.1;source_transcript_name=ENST00000766670;source_gene=ENSG00000299821.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299821.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766670.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299821;transcript_id=HG002_chrY_T0000526;gene_id=HG002_chrY_G0000140;Parent=HG002_chrY_T0000526;transcript_name=HG002_chrY_T0000526;gene_name=ENSG00000299821;ID=intron:HG002_chrY_T0000526:1;Name=ENSG00000299821;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7799260	7799575	.	+	.	source_transcript=ENST00000766670.1;source_transcript_name=ENST00000766670;source_gene=ENSG00000299821.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299821.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766670.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299821;transcript_id=HG002_chrY_T0000526;gene_id=HG002_chrY_G0000140;Parent=HG002_chrY_T0000526;transcript_name=HG002_chrY_T0000526;gene_name=ENSG00000299821;ID=exon:HG002_chrY_T0000526:2;Name=ENSG00000299821;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	7798042	7807521	.	-	.	source_gene_common_name=ENSG00000299844;source_gene=ENSG00000299844.1;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;gene_id=HG002_chrY_G0000141;gene_biotype=lncRNA;gene_name=ENSG00000299844;gene_sources=liftoff;ID=HG002_chrY_G0000141;Name=ENSG00000299844
HG002_chrY	CAT	transcript	7798042	7807521	1000	-	.	source_transcript=ENST00000766734.1;source_transcript_name=ENST00000766734;source_gene=ENSG00000299844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766734.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299844;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;transcript_id=HG002_chrY_T0000527;gene_id=HG002_chrY_G0000141;Parent=HG002_chrY_G0000141;transcript_name=HG002_chrY_T0000527;gene_name=ENSG00000299844;ID=HG002_chrY_T0000527;Name=ENSG00000299844
HG002_chrY	CAT	exon	7798042	7798189	.	-	.	source_transcript=ENST00000766734.1;source_transcript_name=ENST00000766734;source_gene=ENSG00000299844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766734.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299844;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;transcript_id=HG002_chrY_T0000527;gene_id=HG002_chrY_G0000141;Parent=HG002_chrY_T0000527;transcript_name=HG002_chrY_T0000527;gene_name=ENSG00000299844;ID=exon:HG002_chrY_T0000527:0;Name=ENSG00000299844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7798190	7800089	.	-	.	source_transcript=ENST00000766734.1;source_transcript_name=ENST00000766734;source_gene=ENSG00000299844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766734.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299844;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;transcript_id=HG002_chrY_T0000527;gene_id=HG002_chrY_G0000141;Parent=HG002_chrY_T0000527;transcript_name=HG002_chrY_T0000527;gene_name=ENSG00000299844;ID=intron:HG002_chrY_T0000527:0;Name=ENSG00000299844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7800090	7800197	.	-	.	source_transcript=ENST00000766734.1;source_transcript_name=ENST00000766734;source_gene=ENSG00000299844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766734.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299844;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;transcript_id=HG002_chrY_T0000527;gene_id=HG002_chrY_G0000141;Parent=HG002_chrY_T0000527;transcript_name=HG002_chrY_T0000527;gene_name=ENSG00000299844;ID=exon:HG002_chrY_T0000527:1;Name=ENSG00000299844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7800198	7807456	.	-	.	source_transcript=ENST00000766734.1;source_transcript_name=ENST00000766734;source_gene=ENSG00000299844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766734.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299844;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;transcript_id=HG002_chrY_T0000527;gene_id=HG002_chrY_G0000141;Parent=HG002_chrY_T0000527;transcript_name=HG002_chrY_T0000527;gene_name=ENSG00000299844;ID=intron:HG002_chrY_T0000527:1;Name=ENSG00000299844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7807457	7807521	.	-	.	source_transcript=ENST00000766734.1;source_transcript_name=ENST00000766734;source_gene=ENSG00000299844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766734.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299844;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;transcript_id=HG002_chrY_T0000527;gene_id=HG002_chrY_G0000141;Parent=HG002_chrY_T0000527;transcript_name=HG002_chrY_T0000527;gene_name=ENSG00000299844;ID=exon:HG002_chrY_T0000527:2;Name=ENSG00000299844;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	7920267	7933002	.	-	.	source_gene_common_name=RBMY2KP;source_gene=ENSG00000225809.1;alternative_source_transcripts=ENST00000418221.1;gene_id=HG002_chrY_G0000142;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2KP;gene_sources=liftoff,transMap;ID=HG002_chrY_G0000142;Name=RBMY2KP
HG002_chrY	CAT	transcript	7920267	7933002	1000	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG002_chrY_T0000528;gene_id=HG002_chrY_G0000142;Parent=HG002_chrY_G0000142;transcript_name=HG002_chrY_T0000528;gene_name=RBMY2KP;ID=HG002_chrY_T0000528;Name=RBMY2KP
HG002_chrY	CAT	exon	7920267	7920583	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG002_chrY_T0000528;gene_id=HG002_chrY_G0000142;Parent=HG002_chrY_T0000528;transcript_name=HG002_chrY_T0000528;gene_name=RBMY2KP;ID=exon:HG002_chrY_T0000528:0;Name=RBMY2KP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7920584	7920992	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG002_chrY_T0000528;gene_id=HG002_chrY_G0000142;Parent=HG002_chrY_T0000528;transcript_name=HG002_chrY_T0000528;gene_name=RBMY2KP;ID=intron:HG002_chrY_T0000528:0;Name=RBMY2KP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7920993	7921262	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG002_chrY_T0000528;gene_id=HG002_chrY_G0000142;Parent=HG002_chrY_T0000528;transcript_name=HG002_chrY_T0000528;gene_name=RBMY2KP;ID=exon:HG002_chrY_T0000528:1;Name=RBMY2KP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7921263	7922132	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG002_chrY_T0000528;gene_id=HG002_chrY_G0000142;Parent=HG002_chrY_T0000528;transcript_name=HG002_chrY_T0000528;gene_name=RBMY2KP;ID=intron:HG002_chrY_T0000528:1;Name=RBMY2KP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7922133	7922247	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG002_chrY_T0000528;gene_id=HG002_chrY_G0000142;Parent=HG002_chrY_T0000528;transcript_name=HG002_chrY_T0000528;gene_name=RBMY2KP;ID=exon:HG002_chrY_T0000528:2;Name=RBMY2KP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7922248	7927097	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG002_chrY_T0000528;gene_id=HG002_chrY_G0000142;Parent=HG002_chrY_T0000528;transcript_name=HG002_chrY_T0000528;gene_name=RBMY2KP;ID=intron:HG002_chrY_T0000528:2;Name=RBMY2KP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7927098	7927247	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG002_chrY_T0000528;gene_id=HG002_chrY_G0000142;Parent=HG002_chrY_T0000528;transcript_name=HG002_chrY_T0000528;gene_name=RBMY2KP;ID=exon:HG002_chrY_T0000528:3;Name=RBMY2KP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7927248	7932367	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG002_chrY_T0000528;gene_id=HG002_chrY_G0000142;Parent=HG002_chrY_T0000528;transcript_name=HG002_chrY_T0000528;gene_name=RBMY2KP;ID=intron:HG002_chrY_T0000528:3;Name=RBMY2KP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7932368	7932470	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG002_chrY_T0000528;gene_id=HG002_chrY_G0000142;Parent=HG002_chrY_T0000528;transcript_name=HG002_chrY_T0000528;gene_name=RBMY2KP;ID=exon:HG002_chrY_T0000528:4;Name=RBMY2KP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7932471	7932894	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG002_chrY_T0000528;gene_id=HG002_chrY_G0000142;Parent=HG002_chrY_T0000528;transcript_name=HG002_chrY_T0000528;gene_name=RBMY2KP;ID=intron:HG002_chrY_T0000528:4;Name=RBMY2KP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7932895	7933002	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG002_chrY_T0000528;gene_id=HG002_chrY_G0000142;Parent=HG002_chrY_T0000528;transcript_name=HG002_chrY_T0000528;gene_name=RBMY2KP;ID=exon:HG002_chrY_T0000528:5;Name=RBMY2KP;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	7920267	7933002	1000	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG002_chrY_T0000529;gene_id=HG002_chrY_G0000142;Parent=HG002_chrY_G0000142;transcript_name=HG002_chrY_T0000529;gene_name=RBMY2KP;ID=HG002_chrY_T0000529;Name=RBMY2KP
HG002_chrY	CAT	exon	7920267	7920583	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG002_chrY_T0000529;gene_id=HG002_chrY_G0000142;Parent=HG002_chrY_T0000529;transcript_name=HG002_chrY_T0000529;gene_name=RBMY2KP;ID=exon:HG002_chrY_T0000529:0;Name=RBMY2KP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7920584	7920992	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG002_chrY_T0000529;gene_id=HG002_chrY_G0000142;Parent=HG002_chrY_T0000529;transcript_name=HG002_chrY_T0000529;gene_name=RBMY2KP;ID=intron:HG002_chrY_T0000529:0;Name=RBMY2KP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7920993	7921080	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG002_chrY_T0000529;gene_id=HG002_chrY_G0000142;Parent=HG002_chrY_T0000529;transcript_name=HG002_chrY_T0000529;gene_name=RBMY2KP;ID=exon:HG002_chrY_T0000529:1;Name=RBMY2KP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7921081	7921151	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG002_chrY_T0000529;gene_id=HG002_chrY_G0000142;Parent=HG002_chrY_T0000529;transcript_name=HG002_chrY_T0000529;gene_name=RBMY2KP;ID=intron:HG002_chrY_T0000529:1;Name=RBMY2KP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7921152	7921262	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG002_chrY_T0000529;gene_id=HG002_chrY_G0000142;Parent=HG002_chrY_T0000529;transcript_name=HG002_chrY_T0000529;gene_name=RBMY2KP;ID=exon:HG002_chrY_T0000529:2;Name=RBMY2KP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7921263	7922132	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG002_chrY_T0000529;gene_id=HG002_chrY_G0000142;Parent=HG002_chrY_T0000529;transcript_name=HG002_chrY_T0000529;gene_name=RBMY2KP;ID=intron:HG002_chrY_T0000529:2;Name=RBMY2KP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7922133	7922247	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG002_chrY_T0000529;gene_id=HG002_chrY_G0000142;Parent=HG002_chrY_T0000529;transcript_name=HG002_chrY_T0000529;gene_name=RBMY2KP;ID=exon:HG002_chrY_T0000529:3;Name=RBMY2KP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7922248	7927097	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG002_chrY_T0000529;gene_id=HG002_chrY_G0000142;Parent=HG002_chrY_T0000529;transcript_name=HG002_chrY_T0000529;gene_name=RBMY2KP;ID=intron:HG002_chrY_T0000529:3;Name=RBMY2KP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7927098	7927247	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG002_chrY_T0000529;gene_id=HG002_chrY_G0000142;Parent=HG002_chrY_T0000529;transcript_name=HG002_chrY_T0000529;gene_name=RBMY2KP;ID=exon:HG002_chrY_T0000529:4;Name=RBMY2KP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7927248	7932367	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG002_chrY_T0000529;gene_id=HG002_chrY_G0000142;Parent=HG002_chrY_T0000529;transcript_name=HG002_chrY_T0000529;gene_name=RBMY2KP;ID=intron:HG002_chrY_T0000529:4;Name=RBMY2KP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7932368	7932470	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG002_chrY_T0000529;gene_id=HG002_chrY_G0000142;Parent=HG002_chrY_T0000529;transcript_name=HG002_chrY_T0000529;gene_name=RBMY2KP;ID=exon:HG002_chrY_T0000529:5;Name=RBMY2KP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7932471	7932894	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG002_chrY_T0000529;gene_id=HG002_chrY_G0000142;Parent=HG002_chrY_T0000529;transcript_name=HG002_chrY_T0000529;gene_name=RBMY2KP;ID=intron:HG002_chrY_T0000529:5;Name=RBMY2KP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7932895	7933002	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG002_chrY_T0000529;gene_id=HG002_chrY_G0000142;Parent=HG002_chrY_T0000529;transcript_name=HG002_chrY_T0000529;gene_name=RBMY2KP;ID=exon:HG002_chrY_T0000529:6;Name=RBMY2KP;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	7936012	7938023	.	+	.	source_gene_common_name=TSPY24P;source_gene=ENSG00000215601.3;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;gene_id=HG002_chrY_G0000143;gene_biotype=unprocessed_pseudogene;gene_name=TSPY24P;gene_sources=liftoff;ID=HG002_chrY_G0000143;Name=TSPY24P
HG002_chrY	CAT	transcript	7936012	7938023	1000	+	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=HG002_chrY_T0000530;gene_id=HG002_chrY_G0000143;Parent=HG002_chrY_G0000143;transcript_name=HG002_chrY_T0000530;gene_name=TSPY24P;ID=HG002_chrY_T0000530;Name=TSPY24P
HG002_chrY	CAT	exon	7936012	7936149	.	+	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=HG002_chrY_T0000530;gene_id=HG002_chrY_G0000143;Parent=HG002_chrY_T0000530;transcript_name=HG002_chrY_T0000530;gene_name=TSPY24P;ID=exon:HG002_chrY_T0000530:0;Name=TSPY24P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7936150	7937514	.	+	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=HG002_chrY_T0000530;gene_id=HG002_chrY_G0000143;Parent=HG002_chrY_T0000530;transcript_name=HG002_chrY_T0000530;gene_name=TSPY24P;ID=intron:HG002_chrY_T0000530:0;Name=TSPY24P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7937515	7937624	.	+	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=HG002_chrY_T0000530;gene_id=HG002_chrY_G0000143;Parent=HG002_chrY_T0000530;transcript_name=HG002_chrY_T0000530;gene_name=TSPY24P;ID=exon:HG002_chrY_T0000530:1;Name=TSPY24P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7937625	7937710	.	+	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=HG002_chrY_T0000530;gene_id=HG002_chrY_G0000143;Parent=HG002_chrY_T0000530;transcript_name=HG002_chrY_T0000530;gene_name=TSPY24P;ID=intron:HG002_chrY_T0000530:1;Name=TSPY24P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7937711	7937856	.	+	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=HG002_chrY_T0000530;gene_id=HG002_chrY_G0000143;Parent=HG002_chrY_T0000530;transcript_name=HG002_chrY_T0000530;gene_name=TSPY24P;ID=exon:HG002_chrY_T0000530:2;Name=TSPY24P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	7937857	7937974	.	+	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=HG002_chrY_T0000530;gene_id=HG002_chrY_G0000143;Parent=HG002_chrY_T0000530;transcript_name=HG002_chrY_T0000530;gene_name=TSPY24P;ID=intron:HG002_chrY_T0000530:2;Name=TSPY24P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	7937975	7938023	.	+	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=HG002_chrY_T0000530;gene_id=HG002_chrY_G0000143;Parent=HG002_chrY_T0000530;transcript_name=HG002_chrY_T0000530;gene_name=TSPY24P;ID=exon:HG002_chrY_T0000530:3;Name=TSPY24P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8006723	8007935	.	+	.	source_gene_common_name=ZNF736P6Y;source_gene=ENSG00000224634.1;alternative_source_transcripts=ENST00000447526.1,ENST00000447526.1;gene_id=HG002_chrY_G0000144;gene_biotype=processed_pseudogene;gene_name=ZNF736P6Y;gene_sources=liftoff;ID=HG002_chrY_G0000144;Name=ZNF736P6Y
HG002_chrY	CAT	transcript	8006723	8007935	1000	+	.	source_transcript=ENST00000447526.1;source_transcript_name=ZNF736P6Y-201;source_gene=ENSG00000224634.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224634.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000447526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447526.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P6Y;alternative_source_transcripts=ENST00000447526.1,ENST00000447526.1;transcript_id=HG002_chrY_T0000531;gene_id=HG002_chrY_G0000144;Parent=HG002_chrY_G0000144;transcript_name=HG002_chrY_T0000531;gene_name=ZNF736P6Y;ID=HG002_chrY_T0000531;Name=ZNF736P6Y
HG002_chrY	CAT	exon	8006723	8007935	.	+	.	source_transcript=ENST00000447526.1;source_transcript_name=ZNF736P6Y-201;source_gene=ENSG00000224634.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224634.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000447526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P6Y;alternative_source_transcripts=ENST00000447526.1,ENST00000447526.1;transcript_id=HG002_chrY_T0000531;gene_id=HG002_chrY_G0000144;Parent=HG002_chrY_T0000531;transcript_name=HG002_chrY_T0000531;gene_name=ZNF736P6Y;ID=exon:HG002_chrY_T0000531:0;Name=ZNF736P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8019327	8019750	.	-	.	source_gene_common_name=MTND6P1;source_gene=ENSG00000223955.1;alternative_source_transcripts=ENST00000417434.1,ENST00000417434.1;gene_id=HG002_chrY_G0000145;gene_biotype=processed_pseudogene;gene_name=MTND6P1;gene_sources=liftoff;ID=HG002_chrY_G0000145;Name=MTND6P1
HG002_chrY	CAT	transcript	8019327	8019750	1000	-	.	source_transcript=ENST00000417434.1;source_transcript_name=MTND6P1-201;source_gene=ENSG00000223955.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223955.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000417434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417434.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND6P1;alternative_source_transcripts=ENST00000417434.1,ENST00000417434.1;transcript_id=HG002_chrY_T0000532;gene_id=HG002_chrY_G0000145;Parent=HG002_chrY_G0000145;transcript_name=HG002_chrY_T0000532;gene_name=MTND6P1;ID=HG002_chrY_T0000532;Name=MTND6P1
HG002_chrY	CAT	exon	8019327	8019750	.	-	.	source_transcript=ENST00000417434.1;source_transcript_name=MTND6P1-201;source_gene=ENSG00000223955.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223955.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000417434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417434.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND6P1;alternative_source_transcripts=ENST00000417434.1,ENST00000417434.1;transcript_id=HG002_chrY_T0000532;gene_id=HG002_chrY_G0000145;Parent=HG002_chrY_T0000532;transcript_name=HG002_chrY_T0000532;gene_name=MTND6P1;ID=exon:HG002_chrY_T0000532:0;Name=MTND6P1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8019823	8020933	.	+	.	source_gene_common_name=MTCYBP1;source_gene=ENSG00000234179.1;alternative_source_transcripts=ENST00000454315.1,ENST00000454315.1;gene_id=HG002_chrY_G0000146;gene_biotype=processed_pseudogene;gene_name=MTCYBP1;gene_sources=liftoff;ID=HG002_chrY_G0000146;Name=MTCYBP1
HG002_chrY	CAT	transcript	8019823	8020933	1000	+	.	source_transcript=ENST00000454315.1;source_transcript_name=MTCYBP1-201;source_gene=ENSG00000234179.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234179.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454315.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454315.1;transcript_score=198.481;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTCYBP1;alternative_source_transcripts=ENST00000454315.1,ENST00000454315.1;transcript_id=HG002_chrY_T0000533;gene_id=HG002_chrY_G0000146;Parent=HG002_chrY_G0000146;transcript_name=HG002_chrY_T0000533;gene_name=MTCYBP1;ID=HG002_chrY_T0000533;Name=MTCYBP1
HG002_chrY	CAT	exon	8019823	8020933	.	+	.	source_transcript=ENST00000454315.1;source_transcript_name=MTCYBP1-201;source_gene=ENSG00000234179.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234179.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454315.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454315.1;transcript_score=198.481;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTCYBP1;alternative_source_transcripts=ENST00000454315.1,ENST00000454315.1;transcript_id=HG002_chrY_T0000533;gene_id=HG002_chrY_G0000146;Parent=HG002_chrY_T0000533;transcript_name=HG002_chrY_T0000533;gene_name=MTCYBP1;ID=exon:HG002_chrY_T0000533:0;Name=MTCYBP1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8027446	8027813	.	+	.	source_gene_common_name=MTND1P1;source_gene=ENSG00000226529.1;alternative_source_transcripts=ENST00000445453.1,ENST00000445453.1;gene_id=HG002_chrY_G0000147;gene_biotype=processed_pseudogene;gene_name=MTND1P1;gene_sources=liftoff;ID=HG002_chrY_G0000147;Name=MTND1P1
HG002_chrY	CAT	transcript	8027446	8027813	1000	+	.	source_transcript=ENST00000445453.1;source_transcript_name=MTND1P1-201;source_gene=ENSG00000226529.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226529.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445453.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445453.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND1P1;alternative_source_transcripts=ENST00000445453.1,ENST00000445453.1;transcript_id=HG002_chrY_T0000534;gene_id=HG002_chrY_G0000147;Parent=HG002_chrY_G0000147;transcript_name=HG002_chrY_T0000534;gene_name=MTND1P1;ID=HG002_chrY_T0000534;Name=MTND1P1
HG002_chrY	CAT	exon	8027446	8027813	.	+	.	source_transcript=ENST00000445453.1;source_transcript_name=MTND1P1-201;source_gene=ENSG00000226529.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226529.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445453.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445453.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND1P1;alternative_source_transcripts=ENST00000445453.1,ENST00000445453.1;transcript_id=HG002_chrY_T0000534;gene_id=HG002_chrY_G0000147;Parent=HG002_chrY_T0000534;transcript_name=HG002_chrY_T0000534;gene_name=MTND1P1;ID=exon:HG002_chrY_T0000534:0;Name=MTND1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8028024	8028493	.	+	.	source_gene_common_name=MTND2P3;source_gene=ENSG00000234850.1;alternative_source_transcripts=ENST00000452458.1,ENST00000452458.1;gene_id=HG002_chrY_G0000148;gene_biotype=processed_pseudogene;gene_name=MTND2P3;gene_sources=liftoff;ID=HG002_chrY_G0000148;Name=MTND2P3
HG002_chrY	CAT	transcript	8028024	8028493	1000	+	.	source_transcript=ENST00000452458.1;source_transcript_name=MTND2P3-201;source_gene=ENSG00000234850.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234850.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000452458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452458.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND2P3;alternative_source_transcripts=ENST00000452458.1,ENST00000452458.1;transcript_id=HG002_chrY_T0000535;gene_id=HG002_chrY_G0000148;Parent=HG002_chrY_G0000148;transcript_name=HG002_chrY_T0000535;gene_name=MTND2P3;ID=HG002_chrY_T0000535;Name=MTND2P3
HG002_chrY	CAT	exon	8028024	8028493	.	+	.	source_transcript=ENST00000452458.1;source_transcript_name=MTND2P3-201;source_gene=ENSG00000234850.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234850.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000452458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452458.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND2P3;alternative_source_transcripts=ENST00000452458.1,ENST00000452458.1;transcript_id=HG002_chrY_T0000535;gene_id=HG002_chrY_G0000148;Parent=HG002_chrY_T0000535;transcript_name=HG002_chrY_T0000535;gene_name=MTND2P3;ID=exon:HG002_chrY_T0000535:0;Name=MTND2P3;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8050824	8063183	.	+	.	source_gene_common_name=ENSG00000303338;source_gene=ENSG00000303338.1;alternative_source_transcripts=ENST00000793768.1,ENST00000793768.1;gene_id=HG002_chrY_G0000149;gene_biotype=lncRNA;gene_name=ENSG00000303338;gene_sources=liftoff;ID=HG002_chrY_G0000149;Name=ENSG00000303338
HG002_chrY	CAT	transcript	8050824	8058624	1000	+	.	source_transcript=ENST00000793768.1;source_transcript_name=ENST00000793768;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793768.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793768.1,ENST00000793768.1;transcript_id=HG002_chrY_T0000536;gene_id=HG002_chrY_G0000149;Parent=HG002_chrY_G0000149;transcript_name=HG002_chrY_T0000536;gene_name=ENSG00000303338;ID=HG002_chrY_T0000536;Name=ENSG00000303338
HG002_chrY	CAT	exon	8050824	8050915	.	+	.	source_transcript=ENST00000793768.1;source_transcript_name=ENST00000793768;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793768.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793768.1,ENST00000793768.1;transcript_id=HG002_chrY_T0000536;gene_id=HG002_chrY_G0000149;Parent=HG002_chrY_T0000536;transcript_name=HG002_chrY_T0000536;gene_name=ENSG00000303338;ID=exon:HG002_chrY_T0000536:0;Name=ENSG00000303338;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8050916	8058509	.	+	.	source_transcript=ENST00000793768.1;source_transcript_name=ENST00000793768;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793768.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793768.1,ENST00000793768.1;transcript_id=HG002_chrY_T0000536;gene_id=HG002_chrY_G0000149;Parent=HG002_chrY_T0000536;transcript_name=HG002_chrY_T0000536;gene_name=ENSG00000303338;ID=intron:HG002_chrY_T0000536:0;Name=ENSG00000303338;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8058510	8058624	.	+	.	source_transcript=ENST00000793768.1;source_transcript_name=ENST00000793768;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793768.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793768.1,ENST00000793768.1;transcript_id=HG002_chrY_T0000536;gene_id=HG002_chrY_G0000149;Parent=HG002_chrY_T0000536;transcript_name=HG002_chrY_T0000536;gene_name=ENSG00000303338;ID=exon:HG002_chrY_T0000536:1;Name=ENSG00000303338;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8050824	8056113	1000	+	.	source_transcript=ENST00000793770.1;source_transcript_name=ENST00000793770;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793770.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793770.1,ENST00000793770.1;transcript_id=HG002_chrY_T0000537;gene_id=HG002_chrY_G0000149;Parent=HG002_chrY_G0000149;transcript_name=HG002_chrY_T0000537;gene_name=ENSG00000303338;ID=HG002_chrY_T0000537;Name=ENSG00000303338
HG002_chrY	CAT	exon	8050824	8050915	.	+	.	source_transcript=ENST00000793770.1;source_transcript_name=ENST00000793770;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793770.1,ENST00000793770.1;transcript_id=HG002_chrY_T0000537;gene_id=HG002_chrY_G0000149;Parent=HG002_chrY_T0000537;transcript_name=HG002_chrY_T0000537;gene_name=ENSG00000303338;ID=exon:HG002_chrY_T0000537:0;Name=ENSG00000303338;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8050916	8055856	.	+	.	source_transcript=ENST00000793770.1;source_transcript_name=ENST00000793770;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793770.1,ENST00000793770.1;transcript_id=HG002_chrY_T0000537;gene_id=HG002_chrY_G0000149;Parent=HG002_chrY_T0000537;transcript_name=HG002_chrY_T0000537;gene_name=ENSG00000303338;ID=intron:HG002_chrY_T0000537:0;Name=ENSG00000303338;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8055857	8056113	.	+	.	source_transcript=ENST00000793770.1;source_transcript_name=ENST00000793770;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793770.1,ENST00000793770.1;transcript_id=HG002_chrY_T0000537;gene_id=HG002_chrY_G0000149;Parent=HG002_chrY_T0000537;transcript_name=HG002_chrY_T0000537;gene_name=ENSG00000303338;ID=exon:HG002_chrY_T0000537:1;Name=ENSG00000303338;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8050830	8058619	1000	+	.	source_transcript=ENST00000793769.1;source_transcript_name=ENST00000793769;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793769.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793769.1,ENST00000793769.1;transcript_id=HG002_chrY_T0000538;gene_id=HG002_chrY_G0000149;Parent=HG002_chrY_G0000149;transcript_name=HG002_chrY_T0000538;gene_name=ENSG00000303338;ID=HG002_chrY_T0000538;Name=ENSG00000303338
HG002_chrY	CAT	exon	8050830	8050915	.	+	.	source_transcript=ENST00000793769.1;source_transcript_name=ENST00000793769;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793769.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793769.1,ENST00000793769.1;transcript_id=HG002_chrY_T0000538;gene_id=HG002_chrY_G0000149;Parent=HG002_chrY_T0000538;transcript_name=HG002_chrY_T0000538;gene_name=ENSG00000303338;ID=exon:HG002_chrY_T0000538:0;Name=ENSG00000303338;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8050916	8055856	.	+	.	source_transcript=ENST00000793769.1;source_transcript_name=ENST00000793769;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793769.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793769.1,ENST00000793769.1;transcript_id=HG002_chrY_T0000538;gene_id=HG002_chrY_G0000149;Parent=HG002_chrY_T0000538;transcript_name=HG002_chrY_T0000538;gene_name=ENSG00000303338;ID=intron:HG002_chrY_T0000538:0;Name=ENSG00000303338;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8055857	8055942	.	+	.	source_transcript=ENST00000793769.1;source_transcript_name=ENST00000793769;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793769.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793769.1,ENST00000793769.1;transcript_id=HG002_chrY_T0000538;gene_id=HG002_chrY_G0000149;Parent=HG002_chrY_T0000538;transcript_name=HG002_chrY_T0000538;gene_name=ENSG00000303338;ID=exon:HG002_chrY_T0000538:1;Name=ENSG00000303338;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8055943	8058509	.	+	.	source_transcript=ENST00000793769.1;source_transcript_name=ENST00000793769;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793769.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793769.1,ENST00000793769.1;transcript_id=HG002_chrY_T0000538;gene_id=HG002_chrY_G0000149;Parent=HG002_chrY_T0000538;transcript_name=HG002_chrY_T0000538;gene_name=ENSG00000303338;ID=intron:HG002_chrY_T0000538:1;Name=ENSG00000303338;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8058510	8058619	.	+	.	source_transcript=ENST00000793769.1;source_transcript_name=ENST00000793769;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793769.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793769.1,ENST00000793769.1;transcript_id=HG002_chrY_T0000538;gene_id=HG002_chrY_G0000149;Parent=HG002_chrY_T0000538;transcript_name=HG002_chrY_T0000538;gene_name=ENSG00000303338;ID=exon:HG002_chrY_T0000538:2;Name=ENSG00000303338;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8050856	8063183	1000	+	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=HG002_chrY_T0000539;gene_id=HG002_chrY_G0000149;Parent=HG002_chrY_G0000149;transcript_name=HG002_chrY_T0000539;gene_name=ENSG00000303338;ID=HG002_chrY_T0000539;Name=ENSG00000303338
HG002_chrY	CAT	exon	8050856	8050915	.	+	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=HG002_chrY_T0000539;gene_id=HG002_chrY_G0000149;Parent=HG002_chrY_T0000539;transcript_name=HG002_chrY_T0000539;gene_name=ENSG00000303338;ID=exon:HG002_chrY_T0000539:0;Name=ENSG00000303338;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8050916	8058509	.	+	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=HG002_chrY_T0000539;gene_id=HG002_chrY_G0000149;Parent=HG002_chrY_T0000539;transcript_name=HG002_chrY_T0000539;gene_name=ENSG00000303338;ID=intron:HG002_chrY_T0000539:0;Name=ENSG00000303338;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8058510	8058763	.	+	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=HG002_chrY_T0000539;gene_id=HG002_chrY_G0000149;Parent=HG002_chrY_T0000539;transcript_name=HG002_chrY_T0000539;gene_name=ENSG00000303338;ID=exon:HG002_chrY_T0000539:1;Name=ENSG00000303338;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8058764	8059464	.	+	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=HG002_chrY_T0000539;gene_id=HG002_chrY_G0000149;Parent=HG002_chrY_T0000539;transcript_name=HG002_chrY_T0000539;gene_name=ENSG00000303338;ID=intron:HG002_chrY_T0000539:1;Name=ENSG00000303338;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8059465	8059617	.	+	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=HG002_chrY_T0000539;gene_id=HG002_chrY_G0000149;Parent=HG002_chrY_T0000539;transcript_name=HG002_chrY_T0000539;gene_name=ENSG00000303338;ID=exon:HG002_chrY_T0000539:2;Name=ENSG00000303338;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8059618	8062909	.	+	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=HG002_chrY_T0000539;gene_id=HG002_chrY_G0000149;Parent=HG002_chrY_T0000539;transcript_name=HG002_chrY_T0000539;gene_name=ENSG00000303338;ID=intron:HG002_chrY_T0000539:2;Name=ENSG00000303338;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8062910	8063183	.	+	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=HG002_chrY_T0000539;gene_id=HG002_chrY_G0000149;Parent=HG002_chrY_T0000539;transcript_name=HG002_chrY_T0000539;gene_name=ENSG00000303338;ID=exon:HG002_chrY_T0000539:3;Name=ENSG00000303338;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8068820	8069837	.	-	.	source_gene_common_name=TRIM60P3Y;source_gene=ENSG00000227830.1;alternative_source_transcripts=ENST00000432201.1,ENST00000432201.1;gene_id=HG002_chrY_G0000150;gene_biotype=processed_pseudogene;gene_name=TRIM60P3Y;gene_sources=liftoff;ID=HG002_chrY_G0000150;Name=TRIM60P3Y
HG002_chrY	CAT	transcript	8068820	8069837	1000	-	.	source_transcript=ENST00000432201.1;source_transcript_name=TRIM60P3Y-201;source_gene=ENSG00000227830.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227830.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000432201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432201.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P3Y;alternative_source_transcripts=ENST00000432201.1,ENST00000432201.1;transcript_id=HG002_chrY_T0000540;gene_id=HG002_chrY_G0000150;Parent=HG002_chrY_G0000150;transcript_name=HG002_chrY_T0000540;gene_name=TRIM60P3Y;ID=HG002_chrY_T0000540;Name=TRIM60P3Y
HG002_chrY	CAT	exon	8068820	8069237	.	-	.	source_transcript=ENST00000432201.1;source_transcript_name=TRIM60P3Y-201;source_gene=ENSG00000227830.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227830.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000432201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P3Y;alternative_source_transcripts=ENST00000432201.1,ENST00000432201.1;transcript_id=HG002_chrY_T0000540;gene_id=HG002_chrY_G0000150;Parent=HG002_chrY_T0000540;transcript_name=HG002_chrY_T0000540;gene_name=TRIM60P3Y;ID=exon:HG002_chrY_T0000540:0;Name=TRIM60P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8069238	8069582	.	-	.	source_transcript=ENST00000432201.1;source_transcript_name=TRIM60P3Y-201;source_gene=ENSG00000227830.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227830.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000432201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P3Y;alternative_source_transcripts=ENST00000432201.1,ENST00000432201.1;transcript_id=HG002_chrY_T0000540;gene_id=HG002_chrY_G0000150;Parent=HG002_chrY_T0000540;transcript_name=HG002_chrY_T0000540;gene_name=TRIM60P3Y;ID=intron:HG002_chrY_T0000540:0;Name=TRIM60P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8069583	8069837	.	-	.	source_transcript=ENST00000432201.1;source_transcript_name=TRIM60P3Y-201;source_gene=ENSG00000227830.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227830.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000432201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P3Y;alternative_source_transcripts=ENST00000432201.1,ENST00000432201.1;transcript_id=HG002_chrY_T0000540;gene_id=HG002_chrY_G0000150;Parent=HG002_chrY_T0000540;transcript_name=HG002_chrY_T0000540;gene_name=TRIM60P3Y;ID=exon:HG002_chrY_T0000540:1;Name=TRIM60P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8074574	8075683	.	-	.	source_gene_common_name=ZNF736P10Y;source_gene=ENSG00000216824.2;alternative_source_transcripts=ENST00000403990.2,ENST00000403990.2;gene_id=HG002_chrY_G0000151;gene_biotype=processed_pseudogene;gene_name=ZNF736P10Y;gene_sources=liftoff;ID=HG002_chrY_G0000151;Name=ZNF736P10Y
HG002_chrY	CAT	transcript	8074574	8075683	1000	-	.	source_transcript=ENST00000403990.2;source_transcript_name=ZNF736P10Y-201;source_gene=ENSG00000216824.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000216824.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000403990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000403990.2;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P10Y;alternative_source_transcripts=ENST00000403990.2,ENST00000403990.2;transcript_id=HG002_chrY_T0000541;gene_id=HG002_chrY_G0000151;Parent=HG002_chrY_G0000151;transcript_name=HG002_chrY_T0000541;gene_name=ZNF736P10Y;ID=HG002_chrY_T0000541;Name=ZNF736P10Y
HG002_chrY	CAT	exon	8074574	8075683	.	-	.	source_transcript=ENST00000403990.2;source_transcript_name=ZNF736P10Y-201;source_gene=ENSG00000216824.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000216824.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000403990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000403990.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P10Y;alternative_source_transcripts=ENST00000403990.2,ENST00000403990.2;transcript_id=HG002_chrY_T0000541;gene_id=HG002_chrY_G0000151;Parent=HG002_chrY_T0000541;transcript_name=HG002_chrY_T0000541;gene_name=ZNF736P10Y;ID=exon:HG002_chrY_T0000541:0;Name=ZNF736P10Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8173115	8173499	.	-	.	source_gene_common_name=ENSG00000275866;source_gene=ENSG00000275866.1;alternative_source_transcripts=ENST00000621514.1,ENST00000621514.1;gene_id=HG002_chrY_G0000152;gene_biotype=processed_pseudogene;gene_name=ENSG00000275866;gene_sources=liftoff;ID=HG002_chrY_G0000152;Name=ENSG00000275866
HG002_chrY	CAT	transcript	8173115	8173499	1000	-	.	source_transcript=ENST00000621514.1;source_transcript_name=ENST00000621514;source_gene=ENSG00000275866.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000275866.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000621514.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621514.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275866;alternative_source_transcripts=ENST00000621514.1,ENST00000621514.1;transcript_id=HG002_chrY_T0000542;gene_id=HG002_chrY_G0000152;Parent=HG002_chrY_G0000152;transcript_name=HG002_chrY_T0000542;gene_name=ENSG00000275866;ID=HG002_chrY_T0000542;Name=ENSG00000275866
HG002_chrY	CAT	exon	8173115	8173499	.	-	.	source_transcript=ENST00000621514.1;source_transcript_name=ENST00000621514;source_gene=ENSG00000275866.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000275866.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000621514.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621514.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275866;alternative_source_transcripts=ENST00000621514.1,ENST00000621514.1;transcript_id=HG002_chrY_T0000542;gene_id=HG002_chrY_G0000152;Parent=HG002_chrY_T0000542;transcript_name=HG002_chrY_T0000542;gene_name=ENSG00000275866;ID=exon:HG002_chrY_T0000542:0;Name=ENSG00000275866;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8206249	8369703	.	+	.	source_gene_common_name=LINC00279;source_gene=ENSG00000286217.3;gene_id=HG002_chrY_G0000153;gene_biotype=lncRNA;gene_name=LINC00279;gene_sources=liftoff;ID=HG002_chrY_G0000153;Name=LINC00279
HG002_chrY	CAT	transcript	8206249	8216685	1000	+	.	source_transcript=ENST00000767031.1;source_transcript_name=LINC00279-209;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000767031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000767031.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000543;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_G0000153;transcript_name=HG002_chrY_T0000543;gene_name=LINC00279;ID=HG002_chrY_T0000543;Name=LINC00279
HG002_chrY	CAT	exon	8206249	8206360	.	+	.	source_transcript=ENST00000767031.1;source_transcript_name=LINC00279-209;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000767031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000767031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000543;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000543;transcript_name=HG002_chrY_T0000543;gene_name=LINC00279;ID=exon:HG002_chrY_T0000543:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8206361	8215195	.	+	.	source_transcript=ENST00000767031.1;source_transcript_name=LINC00279-209;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000767031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000767031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000543;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000543;transcript_name=HG002_chrY_T0000543;gene_name=LINC00279;ID=intron:HG002_chrY_T0000543:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8215196	8215303	.	+	.	source_transcript=ENST00000767031.1;source_transcript_name=LINC00279-209;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000767031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000767031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000543;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000543;transcript_name=HG002_chrY_T0000543;gene_name=LINC00279;ID=exon:HG002_chrY_T0000543:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8215304	8216154	.	+	.	source_transcript=ENST00000767031.1;source_transcript_name=LINC00279-209;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000767031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000767031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000543;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000543;transcript_name=HG002_chrY_T0000543;gene_name=LINC00279;ID=intron:HG002_chrY_T0000543:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8216155	8216685	.	+	.	source_transcript=ENST00000767031.1;source_transcript_name=LINC00279-209;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000767031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000767031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000543;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000543;transcript_name=HG002_chrY_T0000543;gene_name=LINC00279;ID=exon:HG002_chrY_T0000543:2;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8206273	8258299	1000	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000544;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_G0000153;transcript_name=HG002_chrY_T0000544;gene_name=LINC00279;ID=HG002_chrY_T0000544;Name=LINC00279
HG002_chrY	CAT	exon	8206273	8206360	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000544;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000544;transcript_name=HG002_chrY_T0000544;gene_name=LINC00279;ID=exon:HG002_chrY_T0000544:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8206361	8215195	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000544;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000544;transcript_name=HG002_chrY_T0000544;gene_name=LINC00279;ID=intron:HG002_chrY_T0000544:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8215196	8215303	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000544;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000544;transcript_name=HG002_chrY_T0000544;gene_name=LINC00279;ID=exon:HG002_chrY_T0000544:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8215304	8216154	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000544;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000544;transcript_name=HG002_chrY_T0000544;gene_name=LINC00279;ID=intron:HG002_chrY_T0000544:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8216155	8216274	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000544;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000544;transcript_name=HG002_chrY_T0000544;gene_name=LINC00279;ID=exon:HG002_chrY_T0000544:2;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8216275	8216843	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000544;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000544;transcript_name=HG002_chrY_T0000544;gene_name=LINC00279;ID=intron:HG002_chrY_T0000544:2;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8216844	8216921	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000544;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000544;transcript_name=HG002_chrY_T0000544;gene_name=LINC00279;ID=exon:HG002_chrY_T0000544:3;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8216922	8217815	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000544;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000544;transcript_name=HG002_chrY_T0000544;gene_name=LINC00279;ID=intron:HG002_chrY_T0000544:3;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8217816	8218050	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000544;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000544;transcript_name=HG002_chrY_T0000544;gene_name=LINC00279;ID=exon:HG002_chrY_T0000544:4;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8218051	8237414	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000544;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000544;transcript_name=HG002_chrY_T0000544;gene_name=LINC00279;ID=intron:HG002_chrY_T0000544:4;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8237415	8237578	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000544;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000544;transcript_name=HG002_chrY_T0000544;gene_name=LINC00279;ID=exon:HG002_chrY_T0000544:5;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8237579	8239345	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000544;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000544;transcript_name=HG002_chrY_T0000544;gene_name=LINC00279;ID=intron:HG002_chrY_T0000544:5;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8239346	8239461	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000544;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000544;transcript_name=HG002_chrY_T0000544;gene_name=LINC00279;ID=exon:HG002_chrY_T0000544:6;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8239462	8240969	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000544;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000544;transcript_name=HG002_chrY_T0000544;gene_name=LINC00279;ID=intron:HG002_chrY_T0000544:6;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8240970	8241020	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000544;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000544;transcript_name=HG002_chrY_T0000544;gene_name=LINC00279;ID=exon:HG002_chrY_T0000544:7;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8241021	8250978	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000544;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000544;transcript_name=HG002_chrY_T0000544;gene_name=LINC00279;ID=intron:HG002_chrY_T0000544:7;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8250979	8251218	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000544;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000544;transcript_name=HG002_chrY_T0000544;gene_name=LINC00279;ID=exon:HG002_chrY_T0000544:8;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8251219	8252565	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000544;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000544;transcript_name=HG002_chrY_T0000544;gene_name=LINC00279;ID=intron:HG002_chrY_T0000544:8;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8252566	8252646	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000544;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000544;transcript_name=HG002_chrY_T0000544;gene_name=LINC00279;ID=exon:HG002_chrY_T0000544:9;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8252647	8252871	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000544;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000544;transcript_name=HG002_chrY_T0000544;gene_name=LINC00279;ID=intron:HG002_chrY_T0000544:9;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8252872	8252965	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000544;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000544;transcript_name=HG002_chrY_T0000544;gene_name=LINC00279;ID=exon:HG002_chrY_T0000544:10;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8252966	8253316	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000544;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000544;transcript_name=HG002_chrY_T0000544;gene_name=LINC00279;ID=intron:HG002_chrY_T0000544:10;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8253317	8253476	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000544;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000544;transcript_name=HG002_chrY_T0000544;gene_name=LINC00279;ID=exon:HG002_chrY_T0000544:11;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8253477	8256399	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000544;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000544;transcript_name=HG002_chrY_T0000544;gene_name=LINC00279;ID=intron:HG002_chrY_T0000544:11;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8256400	8256480	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000544;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000544;transcript_name=HG002_chrY_T0000544;gene_name=LINC00279;ID=exon:HG002_chrY_T0000544:12;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8256481	8256692	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000544;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000544;transcript_name=HG002_chrY_T0000544;gene_name=LINC00279;ID=intron:HG002_chrY_T0000544:12;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8256693	8256800	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000544;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000544;transcript_name=HG002_chrY_T0000544;gene_name=LINC00279;ID=exon:HG002_chrY_T0000544:13;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8256801	8256971	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000544;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000544;transcript_name=HG002_chrY_T0000544;gene_name=LINC00279;ID=intron:HG002_chrY_T0000544:13;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8256972	8258299	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000544;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000544;transcript_name=HG002_chrY_T0000544;gene_name=LINC00279;ID=exon:HG002_chrY_T0000544:14;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8239209	8343308	1000	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000545;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_G0000153;transcript_name=HG002_chrY_T0000545;gene_name=LINC00279;ID=HG002_chrY_T0000545;Name=LINC00279
HG002_chrY	CAT	exon	8239209	8239461	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000545;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000545;transcript_name=HG002_chrY_T0000545;gene_name=LINC00279;ID=exon:HG002_chrY_T0000545:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8239462	8334199	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000545;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000545;transcript_name=HG002_chrY_T0000545;gene_name=LINC00279;ID=intron:HG002_chrY_T0000545:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8334200	8334274	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000545;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000545;transcript_name=HG002_chrY_T0000545;gene_name=LINC00279;ID=exon:HG002_chrY_T0000545:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8334275	8336598	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000545;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000545;transcript_name=HG002_chrY_T0000545;gene_name=LINC00279;ID=intron:HG002_chrY_T0000545:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8336599	8336758	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000545;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000545;transcript_name=HG002_chrY_T0000545;gene_name=LINC00279;ID=exon:HG002_chrY_T0000545:2;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8336759	8338189	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000545;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000545;transcript_name=HG002_chrY_T0000545;gene_name=LINC00279;ID=intron:HG002_chrY_T0000545:2;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8338190	8338351	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000545;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000545;transcript_name=HG002_chrY_T0000545;gene_name=LINC00279;ID=exon:HG002_chrY_T0000545:3;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8338352	8343060	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000545;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000545;transcript_name=HG002_chrY_T0000545;gene_name=LINC00279;ID=intron:HG002_chrY_T0000545:3;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8343061	8343308	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000545;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000545;transcript_name=HG002_chrY_T0000545;gene_name=LINC00279;ID=exon:HG002_chrY_T0000545:4;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8239209	8306339	1000	+	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000546;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_G0000153;transcript_name=HG002_chrY_T0000546;gene_name=LINC00279;ID=HG002_chrY_T0000546;Name=LINC00279
HG002_chrY	CAT	exon	8239209	8239461	.	+	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000546;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000546;transcript_name=HG002_chrY_T0000546;gene_name=LINC00279;ID=exon:HG002_chrY_T0000546:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8239462	8288318	.	+	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000546;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000546;transcript_name=HG002_chrY_T0000546;gene_name=LINC00279;ID=intron:HG002_chrY_T0000546:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8288319	8288405	.	+	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000546;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000546;transcript_name=HG002_chrY_T0000546;gene_name=LINC00279;ID=exon:HG002_chrY_T0000546:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8288406	8288865	.	+	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000546;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000546;transcript_name=HG002_chrY_T0000546;gene_name=LINC00279;ID=intron:HG002_chrY_T0000546:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8288866	8289088	.	+	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000546;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000546;transcript_name=HG002_chrY_T0000546;gene_name=LINC00279;ID=exon:HG002_chrY_T0000546:2;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8289089	8305275	.	+	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000546;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000546;transcript_name=HG002_chrY_T0000546;gene_name=LINC00279;ID=intron:HG002_chrY_T0000546:2;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8305276	8305425	.	+	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000546;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000546;transcript_name=HG002_chrY_T0000546;gene_name=LINC00279;ID=exon:HG002_chrY_T0000546:3;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8305426	8306001	.	+	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000546;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000546;transcript_name=HG002_chrY_T0000546;gene_name=LINC00279;ID=intron:HG002_chrY_T0000546:3;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8306002	8306339	.	+	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000546;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000546;transcript_name=HG002_chrY_T0000546;gene_name=LINC00279;ID=exon:HG002_chrY_T0000546:4;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8239220	8369703	1000	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000547;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_G0000153;transcript_name=HG002_chrY_T0000547;gene_name=LINC00279;ID=HG002_chrY_T0000547;Name=LINC00279
HG002_chrY	CAT	exon	8239220	8239461	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000547;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000547;transcript_name=HG002_chrY_T0000547;gene_name=LINC00279;ID=exon:HG002_chrY_T0000547:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8239462	8334199	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000547;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000547;transcript_name=HG002_chrY_T0000547;gene_name=LINC00279;ID=intron:HG002_chrY_T0000547:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8334200	8334274	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000547;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000547;transcript_name=HG002_chrY_T0000547;gene_name=LINC00279;ID=exon:HG002_chrY_T0000547:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8334275	8336598	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000547;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000547;transcript_name=HG002_chrY_T0000547;gene_name=LINC00279;ID=intron:HG002_chrY_T0000547:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8336599	8336758	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000547;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000547;transcript_name=HG002_chrY_T0000547;gene_name=LINC00279;ID=exon:HG002_chrY_T0000547:2;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8336759	8338189	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000547;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000547;transcript_name=HG002_chrY_T0000547;gene_name=LINC00279;ID=intron:HG002_chrY_T0000547:2;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8338190	8338351	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000547;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000547;transcript_name=HG002_chrY_T0000547;gene_name=LINC00279;ID=exon:HG002_chrY_T0000547:3;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8338352	8343060	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000547;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000547;transcript_name=HG002_chrY_T0000547;gene_name=LINC00279;ID=intron:HG002_chrY_T0000547:3;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8343061	8343264	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000547;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000547;transcript_name=HG002_chrY_T0000547;gene_name=LINC00279;ID=exon:HG002_chrY_T0000547:4;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8343265	8346046	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000547;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000547;transcript_name=HG002_chrY_T0000547;gene_name=LINC00279;ID=intron:HG002_chrY_T0000547:4;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8346047	8346208	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000547;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000547;transcript_name=HG002_chrY_T0000547;gene_name=LINC00279;ID=exon:HG002_chrY_T0000547:5;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8346209	8348879	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000547;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000547;transcript_name=HG002_chrY_T0000547;gene_name=LINC00279;ID=intron:HG002_chrY_T0000547:5;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8348880	8349075	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000547;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000547;transcript_name=HG002_chrY_T0000547;gene_name=LINC00279;ID=exon:HG002_chrY_T0000547:6;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8349076	8353622	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000547;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000547;transcript_name=HG002_chrY_T0000547;gene_name=LINC00279;ID=intron:HG002_chrY_T0000547:6;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8353623	8353784	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000547;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000547;transcript_name=HG002_chrY_T0000547;gene_name=LINC00279;ID=exon:HG002_chrY_T0000547:7;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8353785	8355937	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000547;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000547;transcript_name=HG002_chrY_T0000547;gene_name=LINC00279;ID=intron:HG002_chrY_T0000547:7;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8355938	8356099	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000547;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000547;transcript_name=HG002_chrY_T0000547;gene_name=LINC00279;ID=exon:HG002_chrY_T0000547:8;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8356100	8360968	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000547;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000547;transcript_name=HG002_chrY_T0000547;gene_name=LINC00279;ID=intron:HG002_chrY_T0000547:8;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8360969	8361130	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000547;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000547;transcript_name=HG002_chrY_T0000547;gene_name=LINC00279;ID=exon:HG002_chrY_T0000547:9;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8361131	8365976	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000547;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000547;transcript_name=HG002_chrY_T0000547;gene_name=LINC00279;ID=intron:HG002_chrY_T0000547:9;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8365977	8366138	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000547;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000547;transcript_name=HG002_chrY_T0000547;gene_name=LINC00279;ID=exon:HG002_chrY_T0000547:10;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8366139	8369131	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000547;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000547;transcript_name=HG002_chrY_T0000547;gene_name=LINC00279;ID=intron:HG002_chrY_T0000547:10;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8369132	8369703	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000547;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000547;transcript_name=HG002_chrY_T0000547;gene_name=LINC00279;ID=exon:HG002_chrY_T0000547:11;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8239237	8306337	1000	+	.	source_transcript=ENST00000842835.1;source_transcript_name=LINC00279-212;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842835.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000548;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_G0000153;transcript_name=HG002_chrY_T0000548;gene_name=LINC00279;ID=HG002_chrY_T0000548;Name=LINC00279
HG002_chrY	CAT	exon	8239237	8239461	.	+	.	source_transcript=ENST00000842835.1;source_transcript_name=LINC00279-212;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000548;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000548;transcript_name=HG002_chrY_T0000548;gene_name=LINC00279;ID=exon:HG002_chrY_T0000548:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8239462	8305275	.	+	.	source_transcript=ENST00000842835.1;source_transcript_name=LINC00279-212;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000548;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000548;transcript_name=HG002_chrY_T0000548;gene_name=LINC00279;ID=intron:HG002_chrY_T0000548:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8305276	8305425	.	+	.	source_transcript=ENST00000842835.1;source_transcript_name=LINC00279-212;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000548;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000548;transcript_name=HG002_chrY_T0000548;gene_name=LINC00279;ID=exon:HG002_chrY_T0000548:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8305426	8306001	.	+	.	source_transcript=ENST00000842835.1;source_transcript_name=LINC00279-212;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000548;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000548;transcript_name=HG002_chrY_T0000548;gene_name=LINC00279;ID=intron:HG002_chrY_T0000548:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8306002	8306337	.	+	.	source_transcript=ENST00000842835.1;source_transcript_name=LINC00279-212;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000548;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000548;transcript_name=HG002_chrY_T0000548;gene_name=LINC00279;ID=exon:HG002_chrY_T0000548:2;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8239237	8251821	1000	+	.	source_transcript=ENST00000842839.1;source_transcript_name=LINC00279-216;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842839.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000549;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_G0000153;transcript_name=HG002_chrY_T0000549;gene_name=LINC00279;ID=HG002_chrY_T0000549;Name=LINC00279
HG002_chrY	CAT	exon	8239237	8239467	.	+	.	source_transcript=ENST00000842839.1;source_transcript_name=LINC00279-216;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000549;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000549;transcript_name=HG002_chrY_T0000549;gene_name=LINC00279;ID=exon:HG002_chrY_T0000549:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8239468	8250956	.	+	.	source_transcript=ENST00000842839.1;source_transcript_name=LINC00279-216;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000549;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000549;transcript_name=HG002_chrY_T0000549;gene_name=LINC00279;ID=intron:HG002_chrY_T0000549:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8250957	8251821	.	+	.	source_transcript=ENST00000842839.1;source_transcript_name=LINC00279-216;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000549;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000549;transcript_name=HG002_chrY_T0000549;gene_name=LINC00279;ID=exon:HG002_chrY_T0000549:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8239248	8306336	1000	+	.	source_transcript=ENST00000842836.1;source_transcript_name=LINC00279-213;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842836.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000550;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_G0000153;transcript_name=HG002_chrY_T0000550;gene_name=LINC00279;ID=HG002_chrY_T0000550;Name=LINC00279
HG002_chrY	CAT	exon	8239248	8239467	.	+	.	source_transcript=ENST00000842836.1;source_transcript_name=LINC00279-213;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000550;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000550;transcript_name=HG002_chrY_T0000550;gene_name=LINC00279;ID=exon:HG002_chrY_T0000550:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8239468	8305275	.	+	.	source_transcript=ENST00000842836.1;source_transcript_name=LINC00279-213;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000550;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000550;transcript_name=HG002_chrY_T0000550;gene_name=LINC00279;ID=intron:HG002_chrY_T0000550:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8305276	8305425	.	+	.	source_transcript=ENST00000842836.1;source_transcript_name=LINC00279-213;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000550;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000550;transcript_name=HG002_chrY_T0000550;gene_name=LINC00279;ID=exon:HG002_chrY_T0000550:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8305426	8306001	.	+	.	source_transcript=ENST00000842836.1;source_transcript_name=LINC00279-213;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000550;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000550;transcript_name=HG002_chrY_T0000550;gene_name=LINC00279;ID=intron:HG002_chrY_T0000550:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8306002	8306336	.	+	.	source_transcript=ENST00000842836.1;source_transcript_name=LINC00279-213;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000550;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000550;transcript_name=HG002_chrY_T0000550;gene_name=LINC00279;ID=exon:HG002_chrY_T0000550:2;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8239267	8321865	1000	+	.	source_transcript=ENST00000657784.1;source_transcript_name=LINC00279-208;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657784.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000551;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_G0000153;transcript_name=HG002_chrY_T0000551;gene_name=LINC00279;ID=HG002_chrY_T0000551;Name=LINC00279
HG002_chrY	CAT	exon	8239267	8239461	.	+	.	source_transcript=ENST00000657784.1;source_transcript_name=LINC00279-208;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000551;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000551;transcript_name=HG002_chrY_T0000551;gene_name=LINC00279;ID=exon:HG002_chrY_T0000551:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8239462	8313799	.	+	.	source_transcript=ENST00000657784.1;source_transcript_name=LINC00279-208;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000551;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000551;transcript_name=HG002_chrY_T0000551;gene_name=LINC00279;ID=intron:HG002_chrY_T0000551:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8313800	8313872	.	+	.	source_transcript=ENST00000657784.1;source_transcript_name=LINC00279-208;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000551;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000551;transcript_name=HG002_chrY_T0000551;gene_name=LINC00279;ID=exon:HG002_chrY_T0000551:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8313873	8316341	.	+	.	source_transcript=ENST00000657784.1;source_transcript_name=LINC00279-208;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000551;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000551;transcript_name=HG002_chrY_T0000551;gene_name=LINC00279;ID=intron:HG002_chrY_T0000551:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8316342	8321865	.	+	.	source_transcript=ENST00000657784.1;source_transcript_name=LINC00279-208;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000551;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000551;transcript_name=HG002_chrY_T0000551;gene_name=LINC00279;ID=exon:HG002_chrY_T0000551:2;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8239267	8350702	1000	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000552;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_G0000153;transcript_name=HG002_chrY_T0000552;gene_name=LINC00279;ID=HG002_chrY_T0000552;Name=LINC00279
HG002_chrY	CAT	exon	8239267	8239461	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000552;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000552;transcript_name=HG002_chrY_T0000552;gene_name=LINC00279;ID=exon:HG002_chrY_T0000552:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8239462	8334199	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000552;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000552;transcript_name=HG002_chrY_T0000552;gene_name=LINC00279;ID=intron:HG002_chrY_T0000552:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8334200	8334274	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000552;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000552;transcript_name=HG002_chrY_T0000552;gene_name=LINC00279;ID=exon:HG002_chrY_T0000552:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8334275	8336598	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000552;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000552;transcript_name=HG002_chrY_T0000552;gene_name=LINC00279;ID=intron:HG002_chrY_T0000552:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8336599	8336758	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000552;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000552;transcript_name=HG002_chrY_T0000552;gene_name=LINC00279;ID=exon:HG002_chrY_T0000552:2;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8336759	8338189	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000552;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000552;transcript_name=HG002_chrY_T0000552;gene_name=LINC00279;ID=intron:HG002_chrY_T0000552:2;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8338190	8338351	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000552;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000552;transcript_name=HG002_chrY_T0000552;gene_name=LINC00279;ID=exon:HG002_chrY_T0000552:3;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8338352	8343060	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000552;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000552;transcript_name=HG002_chrY_T0000552;gene_name=LINC00279;ID=intron:HG002_chrY_T0000552:3;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8343061	8343264	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000552;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000552;transcript_name=HG002_chrY_T0000552;gene_name=LINC00279;ID=exon:HG002_chrY_T0000552:4;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8343265	8346046	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000552;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000552;transcript_name=HG002_chrY_T0000552;gene_name=LINC00279;ID=intron:HG002_chrY_T0000552:4;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8346047	8346208	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000552;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000552;transcript_name=HG002_chrY_T0000552;gene_name=LINC00279;ID=exon:HG002_chrY_T0000552:5;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8346209	8348879	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000552;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000552;transcript_name=HG002_chrY_T0000552;gene_name=LINC00279;ID=intron:HG002_chrY_T0000552:5;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8348880	8350028	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000552;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000552;transcript_name=HG002_chrY_T0000552;gene_name=LINC00279;ID=exon:HG002_chrY_T0000552:6;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8350029	8350253	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000552;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000552;transcript_name=HG002_chrY_T0000552;gene_name=LINC00279;ID=intron:HG002_chrY_T0000552:6;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8350254	8350702	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000552;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000552;transcript_name=HG002_chrY_T0000552;gene_name=LINC00279;ID=exon:HG002_chrY_T0000552:7;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8239387	8253568	1000	+	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000553;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_G0000153;transcript_name=HG002_chrY_T0000553;gene_name=LINC00279;ID=HG002_chrY_T0000553;Name=LINC00279
HG002_chrY	CAT	exon	8239387	8239467	.	+	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000553;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000553;transcript_name=HG002_chrY_T0000553;gene_name=LINC00279;ID=exon:HG002_chrY_T0000553:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8239468	8240969	.	+	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000553;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000553;transcript_name=HG002_chrY_T0000553;gene_name=LINC00279;ID=intron:HG002_chrY_T0000553:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8240970	8241020	.	+	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000553;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000553;transcript_name=HG002_chrY_T0000553;gene_name=LINC00279;ID=exon:HG002_chrY_T0000553:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8241021	8250978	.	+	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000553;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000553;transcript_name=HG002_chrY_T0000553;gene_name=LINC00279;ID=intron:HG002_chrY_T0000553:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8250979	8251218	.	+	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000553;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000553;transcript_name=HG002_chrY_T0000553;gene_name=LINC00279;ID=exon:HG002_chrY_T0000553:2;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8251219	8253316	.	+	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000553;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000553;transcript_name=HG002_chrY_T0000553;gene_name=LINC00279;ID=intron:HG002_chrY_T0000553:2;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8253317	8253568	.	+	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000553;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000553;transcript_name=HG002_chrY_T0000553;gene_name=LINC00279;ID=exon:HG002_chrY_T0000553:3;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8255823	8306311	1000	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000554;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_G0000153;transcript_name=HG002_chrY_T0000554;gene_name=LINC00279;ID=HG002_chrY_T0000554;Name=LINC00279
HG002_chrY	CAT	exon	8255823	8256800	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000554;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000554;transcript_name=HG002_chrY_T0000554;gene_name=LINC00279;ID=exon:HG002_chrY_T0000554:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8256801	8262722	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000554;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000554;transcript_name=HG002_chrY_T0000554;gene_name=LINC00279;ID=intron:HG002_chrY_T0000554:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8262723	8262795	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000554;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000554;transcript_name=HG002_chrY_T0000554;gene_name=LINC00279;ID=exon:HG002_chrY_T0000554:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8262796	8263002	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000554;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000554;transcript_name=HG002_chrY_T0000554;gene_name=LINC00279;ID=intron:HG002_chrY_T0000554:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8263003	8263089	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000554;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000554;transcript_name=HG002_chrY_T0000554;gene_name=LINC00279;ID=exon:HG002_chrY_T0000554:2;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8263090	8288318	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000554;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000554;transcript_name=HG002_chrY_T0000554;gene_name=LINC00279;ID=intron:HG002_chrY_T0000554:2;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8288319	8288405	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000554;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000554;transcript_name=HG002_chrY_T0000554;gene_name=LINC00279;ID=exon:HG002_chrY_T0000554:3;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8288406	8288865	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000554;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000554;transcript_name=HG002_chrY_T0000554;gene_name=LINC00279;ID=intron:HG002_chrY_T0000554:3;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8288866	8289088	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000554;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000554;transcript_name=HG002_chrY_T0000554;gene_name=LINC00279;ID=exon:HG002_chrY_T0000554:4;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8289089	8305275	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000554;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000554;transcript_name=HG002_chrY_T0000554;gene_name=LINC00279;ID=intron:HG002_chrY_T0000554:4;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8305276	8305425	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000554;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000554;transcript_name=HG002_chrY_T0000554;gene_name=LINC00279;ID=exon:HG002_chrY_T0000554:5;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8305426	8306001	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000554;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000554;transcript_name=HG002_chrY_T0000554;gene_name=LINC00279;ID=intron:HG002_chrY_T0000554:5;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8306002	8306311	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000554;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000554;transcript_name=HG002_chrY_T0000554;gene_name=LINC00279;ID=exon:HG002_chrY_T0000554:6;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8288799	8343303	1000	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000555;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_G0000153;transcript_name=HG002_chrY_T0000555;gene_name=LINC00279;ID=HG002_chrY_T0000555;Name=LINC00279
HG002_chrY	CAT	exon	8288799	8289088	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000555;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000555;transcript_name=HG002_chrY_T0000555;gene_name=LINC00279;ID=exon:HG002_chrY_T0000555:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8289089	8334199	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000555;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000555;transcript_name=HG002_chrY_T0000555;gene_name=LINC00279;ID=intron:HG002_chrY_T0000555:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8334200	8334274	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000555;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000555;transcript_name=HG002_chrY_T0000555;gene_name=LINC00279;ID=exon:HG002_chrY_T0000555:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8334275	8336598	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000555;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000555;transcript_name=HG002_chrY_T0000555;gene_name=LINC00279;ID=intron:HG002_chrY_T0000555:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8336599	8336758	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000555;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000555;transcript_name=HG002_chrY_T0000555;gene_name=LINC00279;ID=exon:HG002_chrY_T0000555:2;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8336759	8338189	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000555;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000555;transcript_name=HG002_chrY_T0000555;gene_name=LINC00279;ID=intron:HG002_chrY_T0000555:2;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8338190	8338351	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000555;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000555;transcript_name=HG002_chrY_T0000555;gene_name=LINC00279;ID=exon:HG002_chrY_T0000555:3;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8338352	8343060	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000555;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000555;transcript_name=HG002_chrY_T0000555;gene_name=LINC00279;ID=intron:HG002_chrY_T0000555:3;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8343061	8343303	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000555;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000555;transcript_name=HG002_chrY_T0000555;gene_name=LINC00279;ID=exon:HG002_chrY_T0000555:4;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8288851	8306339	1000	+	.	source_transcript=ENST00000842838.1;source_transcript_name=LINC00279-215;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842838.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000556;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_G0000153;transcript_name=HG002_chrY_T0000556;gene_name=LINC00279;ID=HG002_chrY_T0000556;Name=LINC00279
HG002_chrY	CAT	exon	8288851	8289088	.	+	.	source_transcript=ENST00000842838.1;source_transcript_name=LINC00279-215;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842838.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000556;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000556;transcript_name=HG002_chrY_T0000556;gene_name=LINC00279;ID=exon:HG002_chrY_T0000556:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8289089	8305275	.	+	.	source_transcript=ENST00000842838.1;source_transcript_name=LINC00279-215;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842838.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000556;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000556;transcript_name=HG002_chrY_T0000556;gene_name=LINC00279;ID=intron:HG002_chrY_T0000556:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8305276	8305425	.	+	.	source_transcript=ENST00000842838.1;source_transcript_name=LINC00279-215;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842838.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000556;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000556;transcript_name=HG002_chrY_T0000556;gene_name=LINC00279;ID=exon:HG002_chrY_T0000556:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8305426	8306001	.	+	.	source_transcript=ENST00000842838.1;source_transcript_name=LINC00279-215;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842838.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000556;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000556;transcript_name=HG002_chrY_T0000556;gene_name=LINC00279;ID=intron:HG002_chrY_T0000556:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8306002	8306339	.	+	.	source_transcript=ENST00000842838.1;source_transcript_name=LINC00279-215;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842838.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000556;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000556;transcript_name=HG002_chrY_T0000556;gene_name=LINC00279;ID=exon:HG002_chrY_T0000556:2;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8288942	8306245	1000	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000557;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_G0000153;transcript_name=HG002_chrY_T0000557;gene_name=LINC00279;ID=HG002_chrY_T0000557;Name=LINC00279
HG002_chrY	CAT	exon	8288942	8289088	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000557;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000557;transcript_name=HG002_chrY_T0000557;gene_name=LINC00279;ID=exon:HG002_chrY_T0000557:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8289089	8295400	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000557;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000557;transcript_name=HG002_chrY_T0000557;gene_name=LINC00279;ID=intron:HG002_chrY_T0000557:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8295401	8295629	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000557;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000557;transcript_name=HG002_chrY_T0000557;gene_name=LINC00279;ID=exon:HG002_chrY_T0000557:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8295630	8299972	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000557;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000557;transcript_name=HG002_chrY_T0000557;gene_name=LINC00279;ID=intron:HG002_chrY_T0000557:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8299973	8300168	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000557;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000557;transcript_name=HG002_chrY_T0000557;gene_name=LINC00279;ID=exon:HG002_chrY_T0000557:2;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8300169	8305275	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000557;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000557;transcript_name=HG002_chrY_T0000557;gene_name=LINC00279;ID=intron:HG002_chrY_T0000557:2;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8305276	8305425	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000557;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000557;transcript_name=HG002_chrY_T0000557;gene_name=LINC00279;ID=exon:HG002_chrY_T0000557:3;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8305426	8306001	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000557;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000557;transcript_name=HG002_chrY_T0000557;gene_name=LINC00279;ID=intron:HG002_chrY_T0000557:3;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8306002	8306245	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000557;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000557;transcript_name=HG002_chrY_T0000557;gene_name=LINC00279;ID=exon:HG002_chrY_T0000557:4;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8294135	8300683	1000	+	.	source_transcript=ENST00000413486.2;source_transcript_name=LINC00279-201;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413486.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000413486.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000558;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_G0000153;transcript_name=HG002_chrY_T0000558;gene_name=LINC00279;ID=HG002_chrY_T0000558;Name=LINC00279
HG002_chrY	CAT	exon	8294135	8294247	.	+	.	source_transcript=ENST00000413486.2;source_transcript_name=LINC00279-201;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413486.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000413486.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000558;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000558;transcript_name=HG002_chrY_T0000558;gene_name=LINC00279;ID=exon:HG002_chrY_T0000558:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8294248	8299972	.	+	.	source_transcript=ENST00000413486.2;source_transcript_name=LINC00279-201;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413486.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000413486.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000558;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000558;transcript_name=HG002_chrY_T0000558;gene_name=LINC00279;ID=intron:HG002_chrY_T0000558:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8299973	8300168	.	+	.	source_transcript=ENST00000413486.2;source_transcript_name=LINC00279-201;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413486.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000413486.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000558;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000558;transcript_name=HG002_chrY_T0000558;gene_name=LINC00279;ID=exon:HG002_chrY_T0000558:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8300169	8300519	.	+	.	source_transcript=ENST00000413486.2;source_transcript_name=LINC00279-201;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413486.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000413486.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000558;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000558;transcript_name=HG002_chrY_T0000558;gene_name=LINC00279;ID=intron:HG002_chrY_T0000558:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8300520	8300683	.	+	.	source_transcript=ENST00000413486.2;source_transcript_name=LINC00279-201;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413486.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000413486.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000558;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000558;transcript_name=HG002_chrY_T0000558;gene_name=LINC00279;ID=exon:HG002_chrY_T0000558:2;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8315815	8316556	1000	+	.	source_transcript=ENST00000842844.1;source_transcript_name=LINC00279-221;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000559;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_G0000153;transcript_name=HG002_chrY_T0000559;gene_name=LINC00279;ID=HG002_chrY_T0000559;Name=LINC00279
HG002_chrY	CAT	exon	8315815	8316006	.	+	.	source_transcript=ENST00000842844.1;source_transcript_name=LINC00279-221;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000559;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000559;transcript_name=HG002_chrY_T0000559;gene_name=LINC00279;ID=exon:HG002_chrY_T0000559:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8316007	8316341	.	+	.	source_transcript=ENST00000842844.1;source_transcript_name=LINC00279-221;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000559;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000559;transcript_name=HG002_chrY_T0000559;gene_name=LINC00279;ID=intron:HG002_chrY_T0000559:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8316342	8316556	.	+	.	source_transcript=ENST00000842844.1;source_transcript_name=LINC00279-221;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000559;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000559;transcript_name=HG002_chrY_T0000559;gene_name=LINC00279;ID=exon:HG002_chrY_T0000559:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8333564	8338576	1000	+	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000572;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_G0000153;transcript_name=HG002_chrY_T0000572;gene_name=LINC00279;ID=HG002_chrY_T0000572;Name=LINC00279
HG002_chrY	CAT	exon	8333564	8333928	.	+	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000572;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000572;transcript_name=HG002_chrY_T0000572;gene_name=LINC00279;ID=exon:HG002_chrY_T0000572:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8333929	8334199	.	+	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000572;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000572;transcript_name=HG002_chrY_T0000572;gene_name=LINC00279;ID=intron:HG002_chrY_T0000572:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8334200	8334274	.	+	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000572;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000572;transcript_name=HG002_chrY_T0000572;gene_name=LINC00279;ID=exon:HG002_chrY_T0000572:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8334275	8336598	.	+	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000572;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000572;transcript_name=HG002_chrY_T0000572;gene_name=LINC00279;ID=intron:HG002_chrY_T0000572:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8336599	8336758	.	+	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000572;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000572;transcript_name=HG002_chrY_T0000572;gene_name=LINC00279;ID=exon:HG002_chrY_T0000572:2;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8336759	8338189	.	+	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000572;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000572;transcript_name=HG002_chrY_T0000572;gene_name=LINC00279;ID=intron:HG002_chrY_T0000572:2;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8338190	8338576	.	+	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000572;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000572;transcript_name=HG002_chrY_T0000572;gene_name=LINC00279;ID=exon:HG002_chrY_T0000572:3;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8333571	8334602	1000	+	.	source_transcript=ENST00000842843.1;source_transcript_name=LINC00279-220;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842843.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000573;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_G0000153;transcript_name=HG002_chrY_T0000573;gene_name=LINC00279;ID=HG002_chrY_T0000573;Name=LINC00279
HG002_chrY	CAT	exon	8333571	8333928	.	+	.	source_transcript=ENST00000842843.1;source_transcript_name=LINC00279-220;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000573;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000573;transcript_name=HG002_chrY_T0000573;gene_name=LINC00279;ID=exon:HG002_chrY_T0000573:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8333929	8334199	.	+	.	source_transcript=ENST00000842843.1;source_transcript_name=LINC00279-220;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000573;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000573;transcript_name=HG002_chrY_T0000573;gene_name=LINC00279;ID=intron:HG002_chrY_T0000573:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8334200	8334274	.	+	.	source_transcript=ENST00000842843.1;source_transcript_name=LINC00279-220;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000573;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000573;transcript_name=HG002_chrY_T0000573;gene_name=LINC00279;ID=exon:HG002_chrY_T0000573:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8334275	8334434	.	+	.	source_transcript=ENST00000842843.1;source_transcript_name=LINC00279-220;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000573;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000573;transcript_name=HG002_chrY_T0000573;gene_name=LINC00279;ID=intron:HG002_chrY_T0000573:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8334435	8334602	.	+	.	source_transcript=ENST00000842843.1;source_transcript_name=LINC00279-220;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000573;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000573;transcript_name=HG002_chrY_T0000573;gene_name=LINC00279;ID=exon:HG002_chrY_T0000573:2;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8333716	8343304	1000	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000574;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_G0000153;transcript_name=HG002_chrY_T0000574;gene_name=LINC00279;ID=HG002_chrY_T0000574;Name=LINC00279
HG002_chrY	CAT	exon	8333716	8333928	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000574;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000574;transcript_name=HG002_chrY_T0000574;gene_name=LINC00279;ID=exon:HG002_chrY_T0000574:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8333929	8334199	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000574;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000574;transcript_name=HG002_chrY_T0000574;gene_name=LINC00279;ID=intron:HG002_chrY_T0000574:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8334200	8334274	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000574;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000574;transcript_name=HG002_chrY_T0000574;gene_name=LINC00279;ID=exon:HG002_chrY_T0000574:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8334275	8336598	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000574;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000574;transcript_name=HG002_chrY_T0000574;gene_name=LINC00279;ID=intron:HG002_chrY_T0000574:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8336599	8336758	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000574;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000574;transcript_name=HG002_chrY_T0000574;gene_name=LINC00279;ID=exon:HG002_chrY_T0000574:2;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8336759	8338189	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000574;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000574;transcript_name=HG002_chrY_T0000574;gene_name=LINC00279;ID=intron:HG002_chrY_T0000574:2;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8338190	8338351	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000574;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000574;transcript_name=HG002_chrY_T0000574;gene_name=LINC00279;ID=exon:HG002_chrY_T0000574:3;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8338352	8343060	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000574;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000574;transcript_name=HG002_chrY_T0000574;gene_name=LINC00279;ID=intron:HG002_chrY_T0000574:3;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8343061	8343304	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000574;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000574;transcript_name=HG002_chrY_T0000574;gene_name=LINC00279;ID=exon:HG002_chrY_T0000574:4;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8341693	8343307	1000	+	.	source_transcript=ENST00000842842.1;source_transcript_name=LINC00279-219;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842842.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000582;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_G0000153;transcript_name=HG002_chrY_T0000582;gene_name=LINC00279;ID=HG002_chrY_T0000582;Name=LINC00279
HG002_chrY	CAT	exon	8341693	8341947	.	+	.	source_transcript=ENST00000842842.1;source_transcript_name=LINC00279-219;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842842.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000582;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000582;transcript_name=HG002_chrY_T0000582;gene_name=LINC00279;ID=exon:HG002_chrY_T0000582:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8341948	8343060	.	+	.	source_transcript=ENST00000842842.1;source_transcript_name=LINC00279-219;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842842.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000582;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000582;transcript_name=HG002_chrY_T0000582;gene_name=LINC00279;ID=intron:HG002_chrY_T0000582:0;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8343061	8343307	.	+	.	source_transcript=ENST00000842842.1;source_transcript_name=LINC00279-219;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842842.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG002_chrY_T0000582;gene_id=HG002_chrY_G0000153;Parent=HG002_chrY_T0000582;transcript_name=HG002_chrY_T0000582;gene_name=LINC00279;ID=exon:HG002_chrY_T0000582:1;Name=LINC00279;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8323256	8335041	.	-	.	source_gene_common_name=ENSG00000309700;source_gene=ENSG00000309700.1;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;gene_id=HG002_chrY_G0000154;gene_biotype=lncRNA;gene_name=ENSG00000309700;gene_sources=liftoff;ID=HG002_chrY_G0000154;Name=ENSG00000309700
HG002_chrY	CAT	transcript	8323256	8333577	1000	-	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;transcript_id=HG002_chrY_T0000560;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_G0000154;transcript_name=HG002_chrY_T0000560;gene_name=ENSG00000309700;ID=HG002_chrY_T0000560;Name=ENSG00000309700
HG002_chrY	CAT	exon	8323256	8323498	.	-	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;transcript_id=HG002_chrY_T0000560;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000560;transcript_name=HG002_chrY_T0000560;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000560:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8323499	8329606	.	-	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;transcript_id=HG002_chrY_T0000560;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000560;transcript_name=HG002_chrY_T0000560;gene_name=ENSG00000309700;ID=intron:HG002_chrY_T0000560:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8329607	8329755	.	-	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;transcript_id=HG002_chrY_T0000560;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000560;transcript_name=HG002_chrY_T0000560;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000560:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8329756	8330733	.	-	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;transcript_id=HG002_chrY_T0000560;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000560;transcript_name=HG002_chrY_T0000560;gene_name=ENSG00000309700;ID=intron:HG002_chrY_T0000560:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8330734	8330808	.	-	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;transcript_id=HG002_chrY_T0000560;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000560;transcript_name=HG002_chrY_T0000560;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000560:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8330809	8333106	.	-	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;transcript_id=HG002_chrY_T0000560;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000560;transcript_name=HG002_chrY_T0000560;gene_name=ENSG00000309700;ID=intron:HG002_chrY_T0000560:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8333107	8333577	.	-	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;transcript_id=HG002_chrY_T0000560;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000560;transcript_name=HG002_chrY_T0000560;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000560:3;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8323256	8329909	1000	-	.	source_transcript=ENST00000843140.1;source_transcript_name=ENST00000843140;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843140.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843140.1,ENST00000843140.1;transcript_id=HG002_chrY_T0000561;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_G0000154;transcript_name=HG002_chrY_T0000561;gene_name=ENSG00000309700;ID=HG002_chrY_T0000561;Name=ENSG00000309700
HG002_chrY	CAT	exon	8323256	8323498	.	-	.	source_transcript=ENST00000843140.1;source_transcript_name=ENST00000843140;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843140.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843140.1,ENST00000843140.1;transcript_id=HG002_chrY_T0000561;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000561;transcript_name=HG002_chrY_T0000561;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000561:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8323499	8329606	.	-	.	source_transcript=ENST00000843140.1;source_transcript_name=ENST00000843140;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843140.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843140.1,ENST00000843140.1;transcript_id=HG002_chrY_T0000561;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000561;transcript_name=HG002_chrY_T0000561;gene_name=ENSG00000309700;ID=intron:HG002_chrY_T0000561:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8329607	8329909	.	-	.	source_transcript=ENST00000843140.1;source_transcript_name=ENST00000843140;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843140.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843140.1,ENST00000843140.1;transcript_id=HG002_chrY_T0000561;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000561;transcript_name=HG002_chrY_T0000561;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000561:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8323257	8335020	1000	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=HG002_chrY_T0000562;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_G0000154;transcript_name=HG002_chrY_T0000562;gene_name=ENSG00000309700;ID=HG002_chrY_T0000562;Name=ENSG00000309700
HG002_chrY	CAT	exon	8323257	8323498	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=HG002_chrY_T0000562;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000562;transcript_name=HG002_chrY_T0000562;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000562:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8323499	8329606	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=HG002_chrY_T0000562;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000562;transcript_name=HG002_chrY_T0000562;gene_name=ENSG00000309700;ID=intron:HG002_chrY_T0000562:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8329607	8329755	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=HG002_chrY_T0000562;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000562;transcript_name=HG002_chrY_T0000562;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000562:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8329756	8330733	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=HG002_chrY_T0000562;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000562;transcript_name=HG002_chrY_T0000562;gene_name=ENSG00000309700;ID=intron:HG002_chrY_T0000562:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8330734	8330808	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=HG002_chrY_T0000562;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000562;transcript_name=HG002_chrY_T0000562;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000562:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8330809	8333106	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=HG002_chrY_T0000562;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000562;transcript_name=HG002_chrY_T0000562;gene_name=ENSG00000309700;ID=intron:HG002_chrY_T0000562:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8333107	8333337	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=HG002_chrY_T0000562;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000562;transcript_name=HG002_chrY_T0000562;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000562:3;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8333338	8334829	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=HG002_chrY_T0000562;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000562;transcript_name=HG002_chrY_T0000562;gene_name=ENSG00000309700;ID=intron:HG002_chrY_T0000562:3;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8334830	8335020	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=HG002_chrY_T0000562;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000562;transcript_name=HG002_chrY_T0000562;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000562:4;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8323257	8335012	1000	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=HG002_chrY_T0000563;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_G0000154;transcript_name=HG002_chrY_T0000563;gene_name=ENSG00000309700;ID=HG002_chrY_T0000563;Name=ENSG00000309700
HG002_chrY	CAT	exon	8323257	8323498	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=HG002_chrY_T0000563;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000563;transcript_name=HG002_chrY_T0000563;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000563:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8323499	8329606	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=HG002_chrY_T0000563;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000563;transcript_name=HG002_chrY_T0000563;gene_name=ENSG00000309700;ID=intron:HG002_chrY_T0000563:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8329607	8329755	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=HG002_chrY_T0000563;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000563;transcript_name=HG002_chrY_T0000563;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000563:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8329756	8330733	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=HG002_chrY_T0000563;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000563;transcript_name=HG002_chrY_T0000563;gene_name=ENSG00000309700;ID=intron:HG002_chrY_T0000563:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8330734	8330808	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=HG002_chrY_T0000563;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000563;transcript_name=HG002_chrY_T0000563;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000563:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8330809	8333106	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=HG002_chrY_T0000563;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000563;transcript_name=HG002_chrY_T0000563;gene_name=ENSG00000309700;ID=intron:HG002_chrY_T0000563:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8333107	8333190	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=HG002_chrY_T0000563;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000563;transcript_name=HG002_chrY_T0000563;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000563:3;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8333191	8334829	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=HG002_chrY_T0000563;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000563;transcript_name=HG002_chrY_T0000563;gene_name=ENSG00000309700;ID=intron:HG002_chrY_T0000563:3;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8334830	8335012	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=HG002_chrY_T0000563;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000563;transcript_name=HG002_chrY_T0000563;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000563:4;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8323257	8334926	1000	-	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=HG002_chrY_T0000564;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_G0000154;transcript_name=HG002_chrY_T0000564;gene_name=ENSG00000309700;ID=HG002_chrY_T0000564;Name=ENSG00000309700
HG002_chrY	CAT	exon	8323257	8323498	.	-	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=HG002_chrY_T0000564;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000564;transcript_name=HG002_chrY_T0000564;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000564:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8323499	8330733	.	-	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=HG002_chrY_T0000564;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000564;transcript_name=HG002_chrY_T0000564;gene_name=ENSG00000309700;ID=intron:HG002_chrY_T0000564:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8330734	8330808	.	-	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=HG002_chrY_T0000564;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000564;transcript_name=HG002_chrY_T0000564;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000564:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8330809	8333106	.	-	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=HG002_chrY_T0000564;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000564;transcript_name=HG002_chrY_T0000564;gene_name=ENSG00000309700;ID=intron:HG002_chrY_T0000564:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8333107	8333190	.	-	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=HG002_chrY_T0000564;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000564;transcript_name=HG002_chrY_T0000564;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000564:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8333191	8334829	.	-	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=HG002_chrY_T0000564;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000564;transcript_name=HG002_chrY_T0000564;gene_name=ENSG00000309700;ID=intron:HG002_chrY_T0000564:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8334830	8334926	.	-	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=HG002_chrY_T0000564;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000564;transcript_name=HG002_chrY_T0000564;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000564:3;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8323257	8333489	1000	-	.	source_transcript=ENST00000843136.1;source_transcript_name=ENST00000843136;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843136.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843136.1,ENST00000843136.1;transcript_id=HG002_chrY_T0000565;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_G0000154;transcript_name=HG002_chrY_T0000565;gene_name=ENSG00000309700;ID=HG002_chrY_T0000565;Name=ENSG00000309700
HG002_chrY	CAT	exon	8323257	8323498	.	-	.	source_transcript=ENST00000843136.1;source_transcript_name=ENST00000843136;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843136.1,ENST00000843136.1;transcript_id=HG002_chrY_T0000565;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000565;transcript_name=HG002_chrY_T0000565;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000565:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8323499	8329606	.	-	.	source_transcript=ENST00000843136.1;source_transcript_name=ENST00000843136;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843136.1,ENST00000843136.1;transcript_id=HG002_chrY_T0000565;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000565;transcript_name=HG002_chrY_T0000565;gene_name=ENSG00000309700;ID=intron:HG002_chrY_T0000565:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8329607	8329755	.	-	.	source_transcript=ENST00000843136.1;source_transcript_name=ENST00000843136;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843136.1,ENST00000843136.1;transcript_id=HG002_chrY_T0000565;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000565;transcript_name=HG002_chrY_T0000565;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000565:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8329756	8333106	.	-	.	source_transcript=ENST00000843136.1;source_transcript_name=ENST00000843136;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843136.1,ENST00000843136.1;transcript_id=HG002_chrY_T0000565;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000565;transcript_name=HG002_chrY_T0000565;gene_name=ENSG00000309700;ID=intron:HG002_chrY_T0000565:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8333107	8333489	.	-	.	source_transcript=ENST00000843136.1;source_transcript_name=ENST00000843136;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843136.1,ENST00000843136.1;transcript_id=HG002_chrY_T0000565;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000565;transcript_name=HG002_chrY_T0000565;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000565:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8323257	8333443	1000	-	.	source_transcript=ENST00000843137.1;source_transcript_name=ENST00000843137;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843137.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843137.1,ENST00000843137.1;transcript_id=HG002_chrY_T0000566;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_G0000154;transcript_name=HG002_chrY_T0000566;gene_name=ENSG00000309700;ID=HG002_chrY_T0000566;Name=ENSG00000309700
HG002_chrY	CAT	exon	8323257	8323498	.	-	.	source_transcript=ENST00000843137.1;source_transcript_name=ENST00000843137;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843137.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843137.1,ENST00000843137.1;transcript_id=HG002_chrY_T0000566;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000566;transcript_name=HG002_chrY_T0000566;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000566:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8323499	8330733	.	-	.	source_transcript=ENST00000843137.1;source_transcript_name=ENST00000843137;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843137.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843137.1,ENST00000843137.1;transcript_id=HG002_chrY_T0000566;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000566;transcript_name=HG002_chrY_T0000566;gene_name=ENSG00000309700;ID=intron:HG002_chrY_T0000566:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8330734	8330808	.	-	.	source_transcript=ENST00000843137.1;source_transcript_name=ENST00000843137;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843137.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843137.1,ENST00000843137.1;transcript_id=HG002_chrY_T0000566;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000566;transcript_name=HG002_chrY_T0000566;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000566:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8330809	8333106	.	-	.	source_transcript=ENST00000843137.1;source_transcript_name=ENST00000843137;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843137.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843137.1,ENST00000843137.1;transcript_id=HG002_chrY_T0000566;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000566;transcript_name=HG002_chrY_T0000566;gene_name=ENSG00000309700;ID=intron:HG002_chrY_T0000566:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8333107	8333443	.	-	.	source_transcript=ENST00000843137.1;source_transcript_name=ENST00000843137;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843137.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843137.1,ENST00000843137.1;transcript_id=HG002_chrY_T0000566;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000566;transcript_name=HG002_chrY_T0000566;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000566:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8323257	8333308	1000	-	.	source_transcript=ENST00000843138.1;source_transcript_name=ENST00000843138;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843138.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843138.1,ENST00000843138.1;transcript_id=HG002_chrY_T0000567;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_G0000154;transcript_name=HG002_chrY_T0000567;gene_name=ENSG00000309700;ID=HG002_chrY_T0000567;Name=ENSG00000309700
HG002_chrY	CAT	exon	8323257	8323498	.	-	.	source_transcript=ENST00000843138.1;source_transcript_name=ENST00000843138;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843138.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843138.1,ENST00000843138.1;transcript_id=HG002_chrY_T0000567;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000567;transcript_name=HG002_chrY_T0000567;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000567:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8323499	8333106	.	-	.	source_transcript=ENST00000843138.1;source_transcript_name=ENST00000843138;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843138.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843138.1,ENST00000843138.1;transcript_id=HG002_chrY_T0000567;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000567;transcript_name=HG002_chrY_T0000567;gene_name=ENSG00000309700;ID=intron:HG002_chrY_T0000567:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8333107	8333308	.	-	.	source_transcript=ENST00000843138.1;source_transcript_name=ENST00000843138;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843138.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843138.1,ENST00000843138.1;transcript_id=HG002_chrY_T0000567;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000567;transcript_name=HG002_chrY_T0000567;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000567:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8323258	8329899	1000	-	.	source_transcript=ENST00000843141.1;source_transcript_name=ENST00000843141;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843141.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843141.1,ENST00000843141.1;transcript_id=HG002_chrY_T0000568;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_G0000154;transcript_name=HG002_chrY_T0000568;gene_name=ENSG00000309700;ID=HG002_chrY_T0000568;Name=ENSG00000309700
HG002_chrY	CAT	exon	8323258	8323498	.	-	.	source_transcript=ENST00000843141.1;source_transcript_name=ENST00000843141;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843141.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843141.1,ENST00000843141.1;transcript_id=HG002_chrY_T0000568;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000568;transcript_name=HG002_chrY_T0000568;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000568:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8323499	8325093	.	-	.	source_transcript=ENST00000843141.1;source_transcript_name=ENST00000843141;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843141.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843141.1,ENST00000843141.1;transcript_id=HG002_chrY_T0000568;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000568;transcript_name=HG002_chrY_T0000568;gene_name=ENSG00000309700;ID=intron:HG002_chrY_T0000568:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8325094	8325132	.	-	.	source_transcript=ENST00000843141.1;source_transcript_name=ENST00000843141;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843141.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843141.1,ENST00000843141.1;transcript_id=HG002_chrY_T0000568;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000568;transcript_name=HG002_chrY_T0000568;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000568:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8325133	8329606	.	-	.	source_transcript=ENST00000843141.1;source_transcript_name=ENST00000843141;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843141.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843141.1,ENST00000843141.1;transcript_id=HG002_chrY_T0000568;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000568;transcript_name=HG002_chrY_T0000568;gene_name=ENSG00000309700;ID=intron:HG002_chrY_T0000568:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8329607	8329899	.	-	.	source_transcript=ENST00000843141.1;source_transcript_name=ENST00000843141;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843141.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843141.1,ENST00000843141.1;transcript_id=HG002_chrY_T0000568;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000568;transcript_name=HG002_chrY_T0000568;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000568:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8327988	8335041	1000	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=HG002_chrY_T0000569;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_G0000154;transcript_name=HG002_chrY_T0000569;gene_name=ENSG00000309700;ID=HG002_chrY_T0000569;Name=ENSG00000309700
HG002_chrY	CAT	exon	8327988	8328452	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=HG002_chrY_T0000569;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000569;transcript_name=HG002_chrY_T0000569;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000569:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8328453	8329606	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=HG002_chrY_T0000569;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000569;transcript_name=HG002_chrY_T0000569;gene_name=ENSG00000309700;ID=intron:HG002_chrY_T0000569:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8329607	8329755	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=HG002_chrY_T0000569;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000569;transcript_name=HG002_chrY_T0000569;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000569:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8329756	8330733	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=HG002_chrY_T0000569;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000569;transcript_name=HG002_chrY_T0000569;gene_name=ENSG00000309700;ID=intron:HG002_chrY_T0000569:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8330734	8330808	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=HG002_chrY_T0000569;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000569;transcript_name=HG002_chrY_T0000569;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000569:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8330809	8333106	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=HG002_chrY_T0000569;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000569;transcript_name=HG002_chrY_T0000569;gene_name=ENSG00000309700;ID=intron:HG002_chrY_T0000569:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8333107	8333190	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=HG002_chrY_T0000569;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000569;transcript_name=HG002_chrY_T0000569;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000569:3;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8333191	8334829	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=HG002_chrY_T0000569;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000569;transcript_name=HG002_chrY_T0000569;gene_name=ENSG00000309700;ID=intron:HG002_chrY_T0000569:3;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8334830	8335041	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=HG002_chrY_T0000569;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000569;transcript_name=HG002_chrY_T0000569;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000569:4;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8327988	8329905	1000	-	.	source_transcript=ENST00000843143.1;source_transcript_name=ENST00000843143;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843143.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843143.1,ENST00000843143.1;transcript_id=HG002_chrY_T0000570;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_G0000154;transcript_name=HG002_chrY_T0000570;gene_name=ENSG00000309700;ID=HG002_chrY_T0000570;Name=ENSG00000309700
HG002_chrY	CAT	exon	8327988	8328452	.	-	.	source_transcript=ENST00000843143.1;source_transcript_name=ENST00000843143;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843143.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843143.1,ENST00000843143.1;transcript_id=HG002_chrY_T0000570;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000570;transcript_name=HG002_chrY_T0000570;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000570:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8328453	8329606	.	-	.	source_transcript=ENST00000843143.1;source_transcript_name=ENST00000843143;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843143.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843143.1,ENST00000843143.1;transcript_id=HG002_chrY_T0000570;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000570;transcript_name=HG002_chrY_T0000570;gene_name=ENSG00000309700;ID=intron:HG002_chrY_T0000570:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8329607	8329905	.	-	.	source_transcript=ENST00000843143.1;source_transcript_name=ENST00000843143;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843143.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843143.1,ENST00000843143.1;transcript_id=HG002_chrY_T0000570;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000570;transcript_name=HG002_chrY_T0000570;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000570:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8327991	8333276	1000	-	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=HG002_chrY_T0000571;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_G0000154;transcript_name=HG002_chrY_T0000571;gene_name=ENSG00000309700;ID=HG002_chrY_T0000571;Name=ENSG00000309700
HG002_chrY	CAT	exon	8327991	8328452	.	-	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=HG002_chrY_T0000571;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000571;transcript_name=HG002_chrY_T0000571;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000571:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8328453	8329606	.	-	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=HG002_chrY_T0000571;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000571;transcript_name=HG002_chrY_T0000571;gene_name=ENSG00000309700;ID=intron:HG002_chrY_T0000571:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8329607	8329755	.	-	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=HG002_chrY_T0000571;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000571;transcript_name=HG002_chrY_T0000571;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000571:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8329756	8330733	.	-	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=HG002_chrY_T0000571;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000571;transcript_name=HG002_chrY_T0000571;gene_name=ENSG00000309700;ID=intron:HG002_chrY_T0000571:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8330734	8330808	.	-	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=HG002_chrY_T0000571;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000571;transcript_name=HG002_chrY_T0000571;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000571:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8330809	8333106	.	-	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=HG002_chrY_T0000571;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000571;transcript_name=HG002_chrY_T0000571;gene_name=ENSG00000309700;ID=intron:HG002_chrY_T0000571:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8333107	8333276	.	-	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=HG002_chrY_T0000571;gene_id=HG002_chrY_G0000154;Parent=HG002_chrY_T0000571;transcript_name=HG002_chrY_T0000571;gene_name=ENSG00000309700;ID=exon:HG002_chrY_T0000571:3;Name=ENSG00000309700;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8338437	8366789	.	-	.	source_gene_common_name=TTTY18;source_gene=ENSG00000233699.3;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;gene_id=HG002_chrY_G0000155;gene_biotype=lncRNA;gene_name=TTTY18;gene_sources=liftoff;ID=HG002_chrY_G0000155;Name=TTTY18
HG002_chrY	CAT	transcript	8338437	8356841	1000	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG002_chrY_T0000575;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_G0000155;transcript_name=HG002_chrY_T0000575;gene_name=TTTY18;ID=HG002_chrY_T0000575;Name=TTTY18
HG002_chrY	CAT	exon	8338437	8339275	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG002_chrY_T0000575;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000575;transcript_name=HG002_chrY_T0000575;gene_name=TTTY18;ID=exon:HG002_chrY_T0000575:0;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8339276	8339563	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG002_chrY_T0000575;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000575;transcript_name=HG002_chrY_T0000575;gene_name=TTTY18;ID=intron:HG002_chrY_T0000575:0;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8339564	8339782	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG002_chrY_T0000575;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000575;transcript_name=HG002_chrY_T0000575;gene_name=TTTY18;ID=exon:HG002_chrY_T0000575:1;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8339783	8342525	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG002_chrY_T0000575;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000575;transcript_name=HG002_chrY_T0000575;gene_name=TTTY18;ID=intron:HG002_chrY_T0000575:1;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8342526	8342580	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG002_chrY_T0000575;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000575;transcript_name=HG002_chrY_T0000575;gene_name=TTTY18;ID=exon:HG002_chrY_T0000575:2;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8342581	8344919	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG002_chrY_T0000575;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000575;transcript_name=HG002_chrY_T0000575;gene_name=TTTY18;ID=intron:HG002_chrY_T0000575:2;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8344920	8345004	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG002_chrY_T0000575;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000575;transcript_name=HG002_chrY_T0000575;gene_name=TTTY18;ID=exon:HG002_chrY_T0000575:3;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8345005	8349620	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG002_chrY_T0000575;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000575;transcript_name=HG002_chrY_T0000575;gene_name=TTTY18;ID=intron:HG002_chrY_T0000575:3;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8349621	8349826	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG002_chrY_T0000575;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000575;transcript_name=HG002_chrY_T0000575;gene_name=TTTY18;ID=exon:HG002_chrY_T0000575:4;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8349827	8350310	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG002_chrY_T0000575;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000575;transcript_name=HG002_chrY_T0000575;gene_name=TTTY18;ID=intron:HG002_chrY_T0000575:4;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8350311	8350388	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG002_chrY_T0000575;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000575;transcript_name=HG002_chrY_T0000575;gene_name=TTTY18;ID=exon:HG002_chrY_T0000575:5;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8350389	8356681	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG002_chrY_T0000575;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000575;transcript_name=HG002_chrY_T0000575;gene_name=TTTY18;ID=intron:HG002_chrY_T0000575:5;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8356682	8356841	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG002_chrY_T0000575;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000575;transcript_name=HG002_chrY_T0000575;gene_name=TTTY18;ID=exon:HG002_chrY_T0000575:6;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8338440	8347323	1000	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=HG002_chrY_T0000576;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_G0000155;transcript_name=HG002_chrY_T0000576;gene_name=TTTY18;ID=HG002_chrY_T0000576;Name=TTTY18
HG002_chrY	CAT	exon	8338440	8339275	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=HG002_chrY_T0000576;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000576;transcript_name=HG002_chrY_T0000576;gene_name=TTTY18;ID=exon:HG002_chrY_T0000576:0;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8339276	8339563	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=HG002_chrY_T0000576;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000576;transcript_name=HG002_chrY_T0000576;gene_name=TTTY18;ID=intron:HG002_chrY_T0000576:0;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8339564	8339782	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=HG002_chrY_T0000576;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000576;transcript_name=HG002_chrY_T0000576;gene_name=TTTY18;ID=exon:HG002_chrY_T0000576:1;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8339783	8342525	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=HG002_chrY_T0000576;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000576;transcript_name=HG002_chrY_T0000576;gene_name=TTTY18;ID=intron:HG002_chrY_T0000576:1;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8342526	8342580	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=HG002_chrY_T0000576;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000576;transcript_name=HG002_chrY_T0000576;gene_name=TTTY18;ID=exon:HG002_chrY_T0000576:2;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8342581	8344919	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=HG002_chrY_T0000576;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000576;transcript_name=HG002_chrY_T0000576;gene_name=TTTY18;ID=intron:HG002_chrY_T0000576:2;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8344920	8345004	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=HG002_chrY_T0000576;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000576;transcript_name=HG002_chrY_T0000576;gene_name=TTTY18;ID=exon:HG002_chrY_T0000576:3;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8345005	8347113	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=HG002_chrY_T0000576;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000576;transcript_name=HG002_chrY_T0000576;gene_name=TTTY18;ID=intron:HG002_chrY_T0000576:3;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8347114	8347323	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=HG002_chrY_T0000576;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000576;transcript_name=HG002_chrY_T0000576;gene_name=TTTY18;ID=exon:HG002_chrY_T0000576:4;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8338962	8347323	1000	-	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=HG002_chrY_T0000577;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_G0000155;transcript_name=HG002_chrY_T0000577;gene_name=TTTY18;ID=HG002_chrY_T0000577;Name=TTTY18
HG002_chrY	CAT	exon	8338962	8339275	.	-	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=HG002_chrY_T0000577;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000577;transcript_name=HG002_chrY_T0000577;gene_name=TTTY18;ID=exon:HG002_chrY_T0000577:0;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8339276	8339563	.	-	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=HG002_chrY_T0000577;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000577;transcript_name=HG002_chrY_T0000577;gene_name=TTTY18;ID=intron:HG002_chrY_T0000577:0;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8339564	8339782	.	-	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=HG002_chrY_T0000577;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000577;transcript_name=HG002_chrY_T0000577;gene_name=TTTY18;ID=exon:HG002_chrY_T0000577:1;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8339783	8342525	.	-	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=HG002_chrY_T0000577;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000577;transcript_name=HG002_chrY_T0000577;gene_name=TTTY18;ID=intron:HG002_chrY_T0000577:1;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8342526	8342580	.	-	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=HG002_chrY_T0000577;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000577;transcript_name=HG002_chrY_T0000577;gene_name=TTTY18;ID=exon:HG002_chrY_T0000577:2;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8342581	8347113	.	-	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=HG002_chrY_T0000577;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000577;transcript_name=HG002_chrY_T0000577;gene_name=TTTY18;ID=intron:HG002_chrY_T0000577:2;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8347114	8347323	.	-	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=HG002_chrY_T0000577;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000577;transcript_name=HG002_chrY_T0000577;gene_name=TTTY18;ID=exon:HG002_chrY_T0000577:3;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8338966	8347288	1000	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG002_chrY_T0000578;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_G0000155;transcript_name=HG002_chrY_T0000578;gene_name=TTTY18;ID=HG002_chrY_T0000578;Name=TTTY18
HG002_chrY	CAT	exon	8338966	8339275	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG002_chrY_T0000578;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000578;transcript_name=HG002_chrY_T0000578;gene_name=TTTY18;ID=exon:HG002_chrY_T0000578:0;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8339276	8339563	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG002_chrY_T0000578;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000578;transcript_name=HG002_chrY_T0000578;gene_name=TTTY18;ID=intron:HG002_chrY_T0000578:0;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8339564	8339782	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG002_chrY_T0000578;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000578;transcript_name=HG002_chrY_T0000578;gene_name=TTTY18;ID=exon:HG002_chrY_T0000578:1;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8339783	8341364	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG002_chrY_T0000578;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000578;transcript_name=HG002_chrY_T0000578;gene_name=TTTY18;ID=intron:HG002_chrY_T0000578:1;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8341365	8341500	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG002_chrY_T0000578;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000578;transcript_name=HG002_chrY_T0000578;gene_name=TTTY18;ID=exon:HG002_chrY_T0000578:2;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8341501	8342525	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG002_chrY_T0000578;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000578;transcript_name=HG002_chrY_T0000578;gene_name=TTTY18;ID=intron:HG002_chrY_T0000578:2;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8342526	8342580	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG002_chrY_T0000578;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000578;transcript_name=HG002_chrY_T0000578;gene_name=TTTY18;ID=exon:HG002_chrY_T0000578:3;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8342581	8344919	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG002_chrY_T0000578;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000578;transcript_name=HG002_chrY_T0000578;gene_name=TTTY18;ID=intron:HG002_chrY_T0000578:3;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8344920	8345004	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG002_chrY_T0000578;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000578;transcript_name=HG002_chrY_T0000578;gene_name=TTTY18;ID=exon:HG002_chrY_T0000578:4;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8345005	8347113	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG002_chrY_T0000578;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000578;transcript_name=HG002_chrY_T0000578;gene_name=TTTY18;ID=intron:HG002_chrY_T0000578:4;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8347114	8347288	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG002_chrY_T0000578;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000578;transcript_name=HG002_chrY_T0000578;gene_name=TTTY18;ID=exon:HG002_chrY_T0000578:5;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8338966	8347285	1000	-	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=HG002_chrY_T0000579;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_G0000155;transcript_name=HG002_chrY_T0000579;gene_name=TTTY18;ID=HG002_chrY_T0000579;Name=TTTY18
HG002_chrY	CAT	exon	8338966	8339275	.	-	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=HG002_chrY_T0000579;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000579;transcript_name=HG002_chrY_T0000579;gene_name=TTTY18;ID=exon:HG002_chrY_T0000579:0;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8339276	8342525	.	-	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=HG002_chrY_T0000579;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000579;transcript_name=HG002_chrY_T0000579;gene_name=TTTY18;ID=intron:HG002_chrY_T0000579:0;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8342526	8342580	.	-	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=HG002_chrY_T0000579;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000579;transcript_name=HG002_chrY_T0000579;gene_name=TTTY18;ID=exon:HG002_chrY_T0000579:1;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8342581	8344919	.	-	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=HG002_chrY_T0000579;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000579;transcript_name=HG002_chrY_T0000579;gene_name=TTTY18;ID=intron:HG002_chrY_T0000579:1;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8344920	8345004	.	-	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=HG002_chrY_T0000579;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000579;transcript_name=HG002_chrY_T0000579;gene_name=TTTY18;ID=exon:HG002_chrY_T0000579:2;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8345005	8347113	.	-	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=HG002_chrY_T0000579;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000579;transcript_name=HG002_chrY_T0000579;gene_name=TTTY18;ID=intron:HG002_chrY_T0000579:2;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8347114	8347285	.	-	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=HG002_chrY_T0000579;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000579;transcript_name=HG002_chrY_T0000579;gene_name=TTTY18;ID=exon:HG002_chrY_T0000579:3;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8338968	8366755	1000	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG002_chrY_T0000580;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_G0000155;transcript_name=HG002_chrY_T0000580;gene_name=TTTY18;ID=HG002_chrY_T0000580;Name=TTTY18
HG002_chrY	CAT	exon	8338968	8339275	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG002_chrY_T0000580;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000580;transcript_name=HG002_chrY_T0000580;gene_name=TTTY18;ID=exon:HG002_chrY_T0000580:0;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8339276	8339563	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG002_chrY_T0000580;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000580;transcript_name=HG002_chrY_T0000580;gene_name=TTTY18;ID=intron:HG002_chrY_T0000580:0;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8339564	8339782	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG002_chrY_T0000580;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000580;transcript_name=HG002_chrY_T0000580;gene_name=TTTY18;ID=exon:HG002_chrY_T0000580:1;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8339783	8342525	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG002_chrY_T0000580;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000580;transcript_name=HG002_chrY_T0000580;gene_name=TTTY18;ID=intron:HG002_chrY_T0000580:1;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8342526	8342580	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG002_chrY_T0000580;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000580;transcript_name=HG002_chrY_T0000580;gene_name=TTTY18;ID=exon:HG002_chrY_T0000580:2;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8342581	8349620	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG002_chrY_T0000580;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000580;transcript_name=HG002_chrY_T0000580;gene_name=TTTY18;ID=intron:HG002_chrY_T0000580:2;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8349621	8349826	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG002_chrY_T0000580;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000580;transcript_name=HG002_chrY_T0000580;gene_name=TTTY18;ID=exon:HG002_chrY_T0000580:3;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8349827	8350310	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG002_chrY_T0000580;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000580;transcript_name=HG002_chrY_T0000580;gene_name=TTTY18;ID=intron:HG002_chrY_T0000580:3;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8350311	8350388	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG002_chrY_T0000580;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000580;transcript_name=HG002_chrY_T0000580;gene_name=TTTY18;ID=exon:HG002_chrY_T0000580:4;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8350389	8366582	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG002_chrY_T0000580;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000580;transcript_name=HG002_chrY_T0000580;gene_name=TTTY18;ID=intron:HG002_chrY_T0000580:4;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8366583	8366755	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG002_chrY_T0000580;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000580;transcript_name=HG002_chrY_T0000580;gene_name=TTTY18;ID=exon:HG002_chrY_T0000580:5;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8338968	8341564	1000	-	.	source_transcript=ENST00000843022.1;source_transcript_name=TTTY18-212;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843022.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843022.1,ENST00000843022.1;transcript_id=HG002_chrY_T0000581;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_G0000155;transcript_name=HG002_chrY_T0000581;gene_name=TTTY18;ID=HG002_chrY_T0000581;Name=TTTY18
HG002_chrY	CAT	exon	8338968	8339275	.	-	.	source_transcript=ENST00000843022.1;source_transcript_name=TTTY18-212;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843022.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843022.1,ENST00000843022.1;transcript_id=HG002_chrY_T0000581;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000581;transcript_name=HG002_chrY_T0000581;gene_name=TTTY18;ID=exon:HG002_chrY_T0000581:0;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8339276	8339563	.	-	.	source_transcript=ENST00000843022.1;source_transcript_name=TTTY18-212;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843022.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843022.1,ENST00000843022.1;transcript_id=HG002_chrY_T0000581;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000581;transcript_name=HG002_chrY_T0000581;gene_name=TTTY18;ID=intron:HG002_chrY_T0000581:0;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8339564	8339782	.	-	.	source_transcript=ENST00000843022.1;source_transcript_name=TTTY18-212;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843022.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843022.1,ENST00000843022.1;transcript_id=HG002_chrY_T0000581;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000581;transcript_name=HG002_chrY_T0000581;gene_name=TTTY18;ID=exon:HG002_chrY_T0000581:1;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8339783	8341364	.	-	.	source_transcript=ENST00000843022.1;source_transcript_name=TTTY18-212;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843022.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843022.1,ENST00000843022.1;transcript_id=HG002_chrY_T0000581;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000581;transcript_name=HG002_chrY_T0000581;gene_name=TTTY18;ID=intron:HG002_chrY_T0000581:1;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8341365	8341564	.	-	.	source_transcript=ENST00000843022.1;source_transcript_name=TTTY18-212;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843022.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843022.1,ENST00000843022.1;transcript_id=HG002_chrY_T0000581;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000581;transcript_name=HG002_chrY_T0000581;gene_name=TTTY18;ID=exon:HG002_chrY_T0000581:2;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8343028	8347319	1000	-	.	source_transcript=ENST00000843021.1;source_transcript_name=TTTY18-211;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843021.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843021.1,ENST00000843021.1;transcript_id=HG002_chrY_T0000583;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_G0000155;transcript_name=HG002_chrY_T0000583;gene_name=TTTY18;ID=HG002_chrY_T0000583;Name=TTTY18
HG002_chrY	CAT	exon	8343028	8343209	.	-	.	source_transcript=ENST00000843021.1;source_transcript_name=TTTY18-211;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843021.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843021.1,ENST00000843021.1;transcript_id=HG002_chrY_T0000583;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000583;transcript_name=HG002_chrY_T0000583;gene_name=TTTY18;ID=exon:HG002_chrY_T0000583:0;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8343210	8344919	.	-	.	source_transcript=ENST00000843021.1;source_transcript_name=TTTY18-211;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843021.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843021.1,ENST00000843021.1;transcript_id=HG002_chrY_T0000583;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000583;transcript_name=HG002_chrY_T0000583;gene_name=TTTY18;ID=intron:HG002_chrY_T0000583:0;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8344920	8345004	.	-	.	source_transcript=ENST00000843021.1;source_transcript_name=TTTY18-211;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843021.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843021.1,ENST00000843021.1;transcript_id=HG002_chrY_T0000583;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000583;transcript_name=HG002_chrY_T0000583;gene_name=TTTY18;ID=exon:HG002_chrY_T0000583:1;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8345005	8347113	.	-	.	source_transcript=ENST00000843021.1;source_transcript_name=TTTY18-211;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843021.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843021.1,ENST00000843021.1;transcript_id=HG002_chrY_T0000583;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000583;transcript_name=HG002_chrY_T0000583;gene_name=TTTY18;ID=intron:HG002_chrY_T0000583:1;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8347114	8347319	.	-	.	source_transcript=ENST00000843021.1;source_transcript_name=TTTY18-211;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843021.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843021.1,ENST00000843021.1;transcript_id=HG002_chrY_T0000583;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000583;transcript_name=HG002_chrY_T0000583;gene_name=TTTY18;ID=exon:HG002_chrY_T0000583:2;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8343029	8347322	1000	-	.	source_transcript=ENST00000843020.1;source_transcript_name=TTTY18-210;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843020.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843020.1,ENST00000843020.1;transcript_id=HG002_chrY_T0000584;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_G0000155;transcript_name=HG002_chrY_T0000584;gene_name=TTTY18;ID=HG002_chrY_T0000584;Name=TTTY18
HG002_chrY	CAT	exon	8343029	8343276	.	-	.	source_transcript=ENST00000843020.1;source_transcript_name=TTTY18-210;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843020.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843020.1,ENST00000843020.1;transcript_id=HG002_chrY_T0000584;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000584;transcript_name=HG002_chrY_T0000584;gene_name=TTTY18;ID=exon:HG002_chrY_T0000584:0;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8343277	8344919	.	-	.	source_transcript=ENST00000843020.1;source_transcript_name=TTTY18-210;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843020.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843020.1,ENST00000843020.1;transcript_id=HG002_chrY_T0000584;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000584;transcript_name=HG002_chrY_T0000584;gene_name=TTTY18;ID=intron:HG002_chrY_T0000584:0;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8344920	8345004	.	-	.	source_transcript=ENST00000843020.1;source_transcript_name=TTTY18-210;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843020.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843020.1,ENST00000843020.1;transcript_id=HG002_chrY_T0000584;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000584;transcript_name=HG002_chrY_T0000584;gene_name=TTTY18;ID=exon:HG002_chrY_T0000584:1;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8345005	8347113	.	-	.	source_transcript=ENST00000843020.1;source_transcript_name=TTTY18-210;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843020.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843020.1,ENST00000843020.1;transcript_id=HG002_chrY_T0000584;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000584;transcript_name=HG002_chrY_T0000584;gene_name=TTTY18;ID=intron:HG002_chrY_T0000584:1;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8347114	8347322	.	-	.	source_transcript=ENST00000843020.1;source_transcript_name=TTTY18-210;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843020.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843020.1,ENST00000843020.1;transcript_id=HG002_chrY_T0000584;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000584;transcript_name=HG002_chrY_T0000584;gene_name=TTTY18;ID=exon:HG002_chrY_T0000584:2;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8343031	8351179	1000	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=HG002_chrY_T0000585;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_G0000155;transcript_name=HG002_chrY_T0000585;gene_name=TTTY18;ID=HG002_chrY_T0000585;Name=TTTY18
HG002_chrY	CAT	exon	8343031	8343209	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=HG002_chrY_T0000585;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000585;transcript_name=HG002_chrY_T0000585;gene_name=TTTY18;ID=exon:HG002_chrY_T0000585:0;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8343210	8344919	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=HG002_chrY_T0000585;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000585;transcript_name=HG002_chrY_T0000585;gene_name=TTTY18;ID=intron:HG002_chrY_T0000585:0;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8344920	8345004	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=HG002_chrY_T0000585;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000585;transcript_name=HG002_chrY_T0000585;gene_name=TTTY18;ID=exon:HG002_chrY_T0000585:1;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8345005	8349620	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=HG002_chrY_T0000585;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000585;transcript_name=HG002_chrY_T0000585;gene_name=TTTY18;ID=intron:HG002_chrY_T0000585:1;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8349621	8349826	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=HG002_chrY_T0000585;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000585;transcript_name=HG002_chrY_T0000585;gene_name=TTTY18;ID=exon:HG002_chrY_T0000585:2;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8349827	8350310	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=HG002_chrY_T0000585;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000585;transcript_name=HG002_chrY_T0000585;gene_name=TTTY18;ID=intron:HG002_chrY_T0000585:2;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8350311	8350388	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=HG002_chrY_T0000585;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000585;transcript_name=HG002_chrY_T0000585;gene_name=TTTY18;ID=exon:HG002_chrY_T0000585:3;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8350389	8350969	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=HG002_chrY_T0000585;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000585;transcript_name=HG002_chrY_T0000585;gene_name=TTTY18;ID=intron:HG002_chrY_T0000585:3;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8350970	8351179	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=HG002_chrY_T0000585;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000585;transcript_name=HG002_chrY_T0000585;gene_name=TTTY18;ID=exon:HG002_chrY_T0000585:4;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8349169	8366770	1000	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=HG002_chrY_T0000586;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_G0000155;transcript_name=HG002_chrY_T0000586;gene_name=TTTY18;ID=HG002_chrY_T0000586;Name=TTTY18
HG002_chrY	CAT	exon	8349169	8349258	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=HG002_chrY_T0000586;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000586;transcript_name=HG002_chrY_T0000586;gene_name=TTTY18;ID=exon:HG002_chrY_T0000586:0;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8349259	8349620	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=HG002_chrY_T0000586;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000586;transcript_name=HG002_chrY_T0000586;gene_name=TTTY18;ID=intron:HG002_chrY_T0000586:0;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8349621	8349826	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=HG002_chrY_T0000586;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000586;transcript_name=HG002_chrY_T0000586;gene_name=TTTY18;ID=exon:HG002_chrY_T0000586:1;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8349827	8350310	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=HG002_chrY_T0000586;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000586;transcript_name=HG002_chrY_T0000586;gene_name=TTTY18;ID=intron:HG002_chrY_T0000586:1;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8350311	8350388	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=HG002_chrY_T0000586;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000586;transcript_name=HG002_chrY_T0000586;gene_name=TTTY18;ID=exon:HG002_chrY_T0000586:2;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8350389	8350969	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=HG002_chrY_T0000586;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000586;transcript_name=HG002_chrY_T0000586;gene_name=TTTY18;ID=intron:HG002_chrY_T0000586:2;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8350970	8351186	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=HG002_chrY_T0000586;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000586;transcript_name=HG002_chrY_T0000586;gene_name=TTTY18;ID=exon:HG002_chrY_T0000586:3;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8351187	8366582	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=HG002_chrY_T0000586;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000586;transcript_name=HG002_chrY_T0000586;gene_name=TTTY18;ID=intron:HG002_chrY_T0000586:3;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8366583	8366770	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=HG002_chrY_T0000586;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000586;transcript_name=HG002_chrY_T0000586;gene_name=TTTY18;ID=exon:HG002_chrY_T0000586:4;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8359963	8366789	1000	-	.	source_transcript=ENST00000843019.1;source_transcript_name=TTTY18-209;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843019.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843019.1,ENST00000843019.1;transcript_id=HG002_chrY_T0000587;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_G0000155;transcript_name=HG002_chrY_T0000587;gene_name=TTTY18;ID=HG002_chrY_T0000587;Name=TTTY18
HG002_chrY	CAT	exon	8359963	8360110	.	-	.	source_transcript=ENST00000843019.1;source_transcript_name=TTTY18-209;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843019.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843019.1,ENST00000843019.1;transcript_id=HG002_chrY_T0000587;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000587;transcript_name=HG002_chrY_T0000587;gene_name=TTTY18;ID=exon:HG002_chrY_T0000587:0;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8360111	8366582	.	-	.	source_transcript=ENST00000843019.1;source_transcript_name=TTTY18-209;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843019.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843019.1,ENST00000843019.1;transcript_id=HG002_chrY_T0000587;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000587;transcript_name=HG002_chrY_T0000587;gene_name=TTTY18;ID=intron:HG002_chrY_T0000587:0;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8366583	8366789	.	-	.	source_transcript=ENST00000843019.1;source_transcript_name=TTTY18-209;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843019.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843019.1,ENST00000843019.1;transcript_id=HG002_chrY_T0000587;gene_id=HG002_chrY_G0000155;Parent=HG002_chrY_T0000587;transcript_name=HG002_chrY_T0000587;gene_name=TTTY18;ID=exon:HG002_chrY_T0000587:1;Name=TTTY18;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8360338	8361149	.	+	.	source_gene_common_name=TTTY19;source_gene=ENSG00000232419.1;gene_id=HG002_chrY_G0000156;gene_biotype=lncRNA;gene_name=TTTY19;gene_sources=liftoff;ID=HG002_chrY_G0000156;Name=TTTY19
HG002_chrY	CAT	transcript	8360338	8361149	1000	+	.	source_transcript=ENST00000453955.1;source_transcript_name=TTTY19-201;source_gene=ENSG00000232419.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232419.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000453955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453955.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;transcript_id=HG002_chrY_T0000588;gene_id=HG002_chrY_G0000156;Parent=HG002_chrY_G0000156;transcript_name=HG002_chrY_T0000588;gene_name=TTTY19;ID=HG002_chrY_T0000588;Name=TTTY19
HG002_chrY	CAT	exon	8360338	8360425	.	+	.	source_transcript=ENST00000453955.1;source_transcript_name=TTTY19-201;source_gene=ENSG00000232419.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232419.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000453955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;transcript_id=HG002_chrY_T0000588;gene_id=HG002_chrY_G0000156;Parent=HG002_chrY_T0000588;transcript_name=HG002_chrY_T0000588;gene_name=TTTY19;ID=exon:HG002_chrY_T0000588:0;Name=TTTY19;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8360426	8360968	.	+	.	source_transcript=ENST00000453955.1;source_transcript_name=TTTY19-201;source_gene=ENSG00000232419.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232419.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000453955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;transcript_id=HG002_chrY_T0000588;gene_id=HG002_chrY_G0000156;Parent=HG002_chrY_T0000588;transcript_name=HG002_chrY_T0000588;gene_name=TTTY19;ID=intron:HG002_chrY_T0000588:0;Name=TTTY19;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8360969	8361149	.	+	.	source_transcript=ENST00000453955.1;source_transcript_name=TTTY19-201;source_gene=ENSG00000232419.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232419.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000453955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;transcript_id=HG002_chrY_T0000588;gene_id=HG002_chrY_G0000156;Parent=HG002_chrY_T0000588;transcript_name=HG002_chrY_T0000588;gene_name=TTTY19;ID=exon:HG002_chrY_T0000588:1;Name=TTTY19;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8377640	8395124	.	-	.	source_gene_common_name=ENSG00000309903;source_gene=ENSG00000309903.1;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;gene_id=HG002_chrY_G0000157;gene_biotype=lncRNA;gene_name=ENSG00000309903;gene_sources=liftoff;ID=HG002_chrY_G0000157;Name=ENSG00000309903
HG002_chrY	CAT	transcript	8377640	8380159	1000	-	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=HG002_chrY_T0000589;gene_id=HG002_chrY_G0000157;Parent=HG002_chrY_G0000157;transcript_name=HG002_chrY_T0000589;gene_name=ENSG00000309903;ID=HG002_chrY_T0000589;Name=ENSG00000309903
HG002_chrY	CAT	exon	8377640	8377956	.	-	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=HG002_chrY_T0000589;gene_id=HG002_chrY_G0000157;Parent=HG002_chrY_T0000589;transcript_name=HG002_chrY_T0000589;gene_name=ENSG00000309903;ID=exon:HG002_chrY_T0000589:0;Name=ENSG00000309903;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8377957	8378053	.	-	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=HG002_chrY_T0000589;gene_id=HG002_chrY_G0000157;Parent=HG002_chrY_T0000589;transcript_name=HG002_chrY_T0000589;gene_name=ENSG00000309903;ID=intron:HG002_chrY_T0000589:0;Name=ENSG00000309903;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8378054	8378149	.	-	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=HG002_chrY_T0000589;gene_id=HG002_chrY_G0000157;Parent=HG002_chrY_T0000589;transcript_name=HG002_chrY_T0000589;gene_name=ENSG00000309903;ID=exon:HG002_chrY_T0000589:1;Name=ENSG00000309903;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8378150	8378239	.	-	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=HG002_chrY_T0000589;gene_id=HG002_chrY_G0000157;Parent=HG002_chrY_T0000589;transcript_name=HG002_chrY_T0000589;gene_name=ENSG00000309903;ID=intron:HG002_chrY_T0000589:1;Name=ENSG00000309903;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8378240	8378502	.	-	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=HG002_chrY_T0000589;gene_id=HG002_chrY_G0000157;Parent=HG002_chrY_T0000589;transcript_name=HG002_chrY_T0000589;gene_name=ENSG00000309903;ID=exon:HG002_chrY_T0000589:2;Name=ENSG00000309903;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8378503	8379970	.	-	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=HG002_chrY_T0000589;gene_id=HG002_chrY_G0000157;Parent=HG002_chrY_T0000589;transcript_name=HG002_chrY_T0000589;gene_name=ENSG00000309903;ID=intron:HG002_chrY_T0000589:2;Name=ENSG00000309903;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8379971	8380159	.	-	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=HG002_chrY_T0000589;gene_id=HG002_chrY_G0000157;Parent=HG002_chrY_T0000589;transcript_name=HG002_chrY_T0000589;gene_name=ENSG00000309903;ID=exon:HG002_chrY_T0000589:3;Name=ENSG00000309903;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8377643	8395124	1000	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=HG002_chrY_T0000590;gene_id=HG002_chrY_G0000157;Parent=HG002_chrY_G0000157;transcript_name=HG002_chrY_T0000590;gene_name=ENSG00000309903;ID=HG002_chrY_T0000590;Name=ENSG00000309903
HG002_chrY	CAT	exon	8377643	8377956	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=HG002_chrY_T0000590;gene_id=HG002_chrY_G0000157;Parent=HG002_chrY_T0000590;transcript_name=HG002_chrY_T0000590;gene_name=ENSG00000309903;ID=exon:HG002_chrY_T0000590:0;Name=ENSG00000309903;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8377957	8378053	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=HG002_chrY_T0000590;gene_id=HG002_chrY_G0000157;Parent=HG002_chrY_T0000590;transcript_name=HG002_chrY_T0000590;gene_name=ENSG00000309903;ID=intron:HG002_chrY_T0000590:0;Name=ENSG00000309903;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8378054	8378149	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=HG002_chrY_T0000590;gene_id=HG002_chrY_G0000157;Parent=HG002_chrY_T0000590;transcript_name=HG002_chrY_T0000590;gene_name=ENSG00000309903;ID=exon:HG002_chrY_T0000590:1;Name=ENSG00000309903;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8378150	8378239	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=HG002_chrY_T0000590;gene_id=HG002_chrY_G0000157;Parent=HG002_chrY_T0000590;transcript_name=HG002_chrY_T0000590;gene_name=ENSG00000309903;ID=intron:HG002_chrY_T0000590:1;Name=ENSG00000309903;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8378240	8378502	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=HG002_chrY_T0000590;gene_id=HG002_chrY_G0000157;Parent=HG002_chrY_T0000590;transcript_name=HG002_chrY_T0000590;gene_name=ENSG00000309903;ID=exon:HG002_chrY_T0000590:2;Name=ENSG00000309903;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8378503	8389236	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=HG002_chrY_T0000590;gene_id=HG002_chrY_G0000157;Parent=HG002_chrY_T0000590;transcript_name=HG002_chrY_T0000590;gene_name=ENSG00000309903;ID=intron:HG002_chrY_T0000590:2;Name=ENSG00000309903;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8389237	8389336	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=HG002_chrY_T0000590;gene_id=HG002_chrY_G0000157;Parent=HG002_chrY_T0000590;transcript_name=HG002_chrY_T0000590;gene_name=ENSG00000309903;ID=exon:HG002_chrY_T0000590:3;Name=ENSG00000309903;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8389337	8394944	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=HG002_chrY_T0000590;gene_id=HG002_chrY_G0000157;Parent=HG002_chrY_T0000590;transcript_name=HG002_chrY_T0000590;gene_name=ENSG00000309903;ID=intron:HG002_chrY_T0000590:3;Name=ENSG00000309903;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8394945	8395124	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=HG002_chrY_T0000590;gene_id=HG002_chrY_G0000157;Parent=HG002_chrY_T0000590;transcript_name=HG002_chrY_T0000590;gene_name=ENSG00000309903;ID=exon:HG002_chrY_T0000590:4;Name=ENSG00000309903;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8378191	8380136	1000	-	.	source_transcript=ENST00000845394.1;source_transcript_name=ENST00000845394;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845394.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845394.1,ENST00000845394.1;transcript_id=HG002_chrY_T0000591;gene_id=HG002_chrY_G0000157;Parent=HG002_chrY_G0000157;transcript_name=HG002_chrY_T0000591;gene_name=ENSG00000309903;ID=HG002_chrY_T0000591;Name=ENSG00000309903
HG002_chrY	CAT	exon	8378191	8378502	.	-	.	source_transcript=ENST00000845394.1;source_transcript_name=ENST00000845394;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845394.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845394.1,ENST00000845394.1;transcript_id=HG002_chrY_T0000591;gene_id=HG002_chrY_G0000157;Parent=HG002_chrY_T0000591;transcript_name=HG002_chrY_T0000591;gene_name=ENSG00000309903;ID=exon:HG002_chrY_T0000591:0;Name=ENSG00000309903;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8378503	8379970	.	-	.	source_transcript=ENST00000845394.1;source_transcript_name=ENST00000845394;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845394.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845394.1,ENST00000845394.1;transcript_id=HG002_chrY_T0000591;gene_id=HG002_chrY_G0000157;Parent=HG002_chrY_T0000591;transcript_name=HG002_chrY_T0000591;gene_name=ENSG00000309903;ID=intron:HG002_chrY_T0000591:0;Name=ENSG00000309903;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8379971	8380136	.	-	.	source_transcript=ENST00000845394.1;source_transcript_name=ENST00000845394;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845394.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845394.1,ENST00000845394.1;transcript_id=HG002_chrY_T0000591;gene_id=HG002_chrY_G0000157;Parent=HG002_chrY_T0000591;transcript_name=HG002_chrY_T0000591;gene_name=ENSG00000309903;ID=exon:HG002_chrY_T0000591:1;Name=ENSG00000309903;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8439193	8473343	.	-	.	source_gene_common_name=TTTY11;source_gene=ENSG00000290381.2;gene_id=HG002_chrY_G0000158;gene_biotype=lncRNA;gene_name=TTTY11;gene_sources=liftoff;ID=HG002_chrY_G0000158;Name=TTTY11
HG002_chrY	CAT	transcript	8439193	8473262	1000	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG002_chrY_T0000592;gene_id=HG002_chrY_G0000158;Parent=HG002_chrY_G0000158;transcript_name=HG002_chrY_T0000592;gene_name=TTTY11;ID=HG002_chrY_T0000592;Name=TTTY11
HG002_chrY	CAT	exon	8439193	8439289	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG002_chrY_T0000592;gene_id=HG002_chrY_G0000158;Parent=HG002_chrY_T0000592;transcript_name=HG002_chrY_T0000592;gene_name=TTTY11;ID=exon:HG002_chrY_T0000592:0;Name=TTTY11;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8439290	8439770	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG002_chrY_T0000592;gene_id=HG002_chrY_G0000158;Parent=HG002_chrY_T0000592;transcript_name=HG002_chrY_T0000592;gene_name=TTTY11;ID=intron:HG002_chrY_T0000592:0;Name=TTTY11;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8439771	8440086	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG002_chrY_T0000592;gene_id=HG002_chrY_G0000158;Parent=HG002_chrY_T0000592;transcript_name=HG002_chrY_T0000592;gene_name=TTTY11;ID=exon:HG002_chrY_T0000592:1;Name=TTTY11;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8440087	8444882	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG002_chrY_T0000592;gene_id=HG002_chrY_G0000158;Parent=HG002_chrY_T0000592;transcript_name=HG002_chrY_T0000592;gene_name=TTTY11;ID=intron:HG002_chrY_T0000592:1;Name=TTTY11;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8444883	8445185	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG002_chrY_T0000592;gene_id=HG002_chrY_G0000158;Parent=HG002_chrY_T0000592;transcript_name=HG002_chrY_T0000592;gene_name=TTTY11;ID=exon:HG002_chrY_T0000592:2;Name=TTTY11;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8445186	8450743	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG002_chrY_T0000592;gene_id=HG002_chrY_G0000158;Parent=HG002_chrY_T0000592;transcript_name=HG002_chrY_T0000592;gene_name=TTTY11;ID=intron:HG002_chrY_T0000592:2;Name=TTTY11;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8450744	8450827	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG002_chrY_T0000592;gene_id=HG002_chrY_G0000158;Parent=HG002_chrY_T0000592;transcript_name=HG002_chrY_T0000592;gene_name=TTTY11;ID=exon:HG002_chrY_T0000592:3;Name=TTTY11;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8450828	8473225	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG002_chrY_T0000592;gene_id=HG002_chrY_G0000158;Parent=HG002_chrY_T0000592;transcript_name=HG002_chrY_T0000592;gene_name=TTTY11;ID=intron:HG002_chrY_T0000592:3;Name=TTTY11;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8473226	8473262	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG002_chrY_T0000592;gene_id=HG002_chrY_G0000158;Parent=HG002_chrY_T0000592;transcript_name=HG002_chrY_T0000592;gene_name=TTTY11;ID=exon:HG002_chrY_T0000592:4;Name=TTTY11;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8471356	8473343	1000	-	.	source_transcript=ENST00000806873.1;source_transcript_name=TTTY11-203;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000806873.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000806873.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG002_chrY_T0000594;gene_id=HG002_chrY_G0000158;Parent=HG002_chrY_G0000158;transcript_name=HG002_chrY_T0000594;gene_name=TTTY11;ID=HG002_chrY_T0000594;Name=TTTY11
HG002_chrY	CAT	exon	8471356	8471809	.	-	.	source_transcript=ENST00000806873.1;source_transcript_name=TTTY11-203;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000806873.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000806873.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG002_chrY_T0000594;gene_id=HG002_chrY_G0000158;Parent=HG002_chrY_T0000594;transcript_name=HG002_chrY_T0000594;gene_name=TTTY11;ID=exon:HG002_chrY_T0000594:0;Name=TTTY11;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8471810	8473225	.	-	.	source_transcript=ENST00000806873.1;source_transcript_name=TTTY11-203;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000806873.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000806873.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG002_chrY_T0000594;gene_id=HG002_chrY_G0000158;Parent=HG002_chrY_T0000594;transcript_name=HG002_chrY_T0000594;gene_name=TTTY11;ID=intron:HG002_chrY_T0000594:0;Name=TTTY11;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8473226	8473343	.	-	.	source_transcript=ENST00000806873.1;source_transcript_name=TTTY11-203;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000806873.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000806873.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG002_chrY_T0000594;gene_id=HG002_chrY_G0000158;Parent=HG002_chrY_T0000594;transcript_name=HG002_chrY_T0000594;gene_name=TTTY11;ID=exon:HG002_chrY_T0000594:1;Name=TTTY11;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8444883	8445185	.	-	.	source_gene_common_name=TTTY11;source_gene=ENSG00000180910.9;gene_id=HG002_chrY_G0000159;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TTTY11;gene_sources=liftoff;ID=HG002_chrY_G0000159;Name=TTTY11
HG002_chrY	CAT	transcript	8444883	8445185	1000	-	.	source_transcript=ENST00000651367.1;source_transcript_name=TTTY11-201;source_gene=ENSG00000180910.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000180910.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000651367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651367.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG002_chrY_T0000593;gene_id=HG002_chrY_G0000159;Parent=HG002_chrY_G0000159;transcript_name=HG002_chrY_T0000593;gene_name=TTTY11;ID=HG002_chrY_T0000593;Name=TTTY11
HG002_chrY	CAT	exon	8444883	8445185	.	-	.	source_transcript=ENST00000651367.1;source_transcript_name=TTTY11-201;source_gene=ENSG00000180910.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000180910.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000651367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG002_chrY_T0000593;gene_id=HG002_chrY_G0000159;Parent=HG002_chrY_T0000593;transcript_name=HG002_chrY_T0000593;gene_name=TTTY11;ID=exon:HG002_chrY_T0000593:0;Name=TTTY11;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8557164	8559237	.	-	.	source_gene_common_name=ENSG00000228207;source_gene=ENSG00000228207.1;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;gene_id=HG002_chrY_G0000160;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000228207;gene_sources=liftoff;ID=HG002_chrY_G0000160;Name=ENSG00000228207
HG002_chrY	CAT	transcript	8557164	8559237	1000	-	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=HG002_chrY_T0000595;gene_id=HG002_chrY_G0000160;Parent=HG002_chrY_G0000160;transcript_name=HG002_chrY_T0000595;gene_name=ENSG00000228207;ID=HG002_chrY_T0000595;Name=ENSG00000228207
HG002_chrY	CAT	exon	8557164	8557219	.	-	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=HG002_chrY_T0000595;gene_id=HG002_chrY_G0000160;Parent=HG002_chrY_T0000595;transcript_name=HG002_chrY_T0000595;gene_name=ENSG00000228207;ID=exon:HG002_chrY_T0000595:0;Name=ENSG00000228207;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8557220	8557330	.	-	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=HG002_chrY_T0000595;gene_id=HG002_chrY_G0000160;Parent=HG002_chrY_T0000595;transcript_name=HG002_chrY_T0000595;gene_name=ENSG00000228207;ID=intron:HG002_chrY_T0000595:0;Name=ENSG00000228207;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8557331	8557474	.	-	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=HG002_chrY_T0000595;gene_id=HG002_chrY_G0000160;Parent=HG002_chrY_T0000595;transcript_name=HG002_chrY_T0000595;gene_name=ENSG00000228207;ID=exon:HG002_chrY_T0000595:1;Name=ENSG00000228207;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8557475	8557561	.	-	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=HG002_chrY_T0000595;gene_id=HG002_chrY_G0000160;Parent=HG002_chrY_T0000595;transcript_name=HG002_chrY_T0000595;gene_name=ENSG00000228207;ID=intron:HG002_chrY_T0000595:1;Name=ENSG00000228207;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8557562	8557700	.	-	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=HG002_chrY_T0000595;gene_id=HG002_chrY_G0000160;Parent=HG002_chrY_T0000595;transcript_name=HG002_chrY_T0000595;gene_name=ENSG00000228207;ID=exon:HG002_chrY_T0000595:2;Name=ENSG00000228207;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8557701	8558951	.	-	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=HG002_chrY_T0000595;gene_id=HG002_chrY_G0000160;Parent=HG002_chrY_T0000595;transcript_name=HG002_chrY_T0000595;gene_name=ENSG00000228207;ID=intron:HG002_chrY_T0000595:2;Name=ENSG00000228207;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8558952	8559237	.	-	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=HG002_chrY_T0000595;gene_id=HG002_chrY_G0000160;Parent=HG002_chrY_T0000595;transcript_name=HG002_chrY_T0000595;gene_name=ENSG00000228207;ID=exon:HG002_chrY_T0000595:3;Name=ENSG00000228207;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8562185	8572034	.	+	.	source_gene_common_name=ENSG00000173357;source_gene=ENSG00000173357.13;gene_id=HG002_chrY_G0000161;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000173357;gene_sources=liftoff;ID=HG002_chrY_G0000161;Name=ENSG00000173357
HG002_chrY	CAT	transcript	8562185	8572034	1000	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG002_chrY_T0000596;gene_id=HG002_chrY_G0000161;Parent=HG002_chrY_G0000161;transcript_name=HG002_chrY_T0000596;gene_name=ENSG00000173357;ID=HG002_chrY_T0000596;Name=ENSG00000173357
HG002_chrY	CAT	exon	8562185	8562293	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG002_chrY_T0000596;gene_id=HG002_chrY_G0000161;Parent=HG002_chrY_T0000596;transcript_name=HG002_chrY_T0000596;gene_name=ENSG00000173357;ID=exon:HG002_chrY_T0000596:0;Name=ENSG00000173357;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8562294	8563054	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG002_chrY_T0000596;gene_id=HG002_chrY_G0000161;Parent=HG002_chrY_T0000596;transcript_name=HG002_chrY_T0000596;gene_name=ENSG00000173357;ID=intron:HG002_chrY_T0000596:0;Name=ENSG00000173357;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8563055	8563158	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG002_chrY_T0000596;gene_id=HG002_chrY_G0000161;Parent=HG002_chrY_T0000596;transcript_name=HG002_chrY_T0000596;gene_name=ENSG00000173357;ID=exon:HG002_chrY_T0000596:1;Name=ENSG00000173357;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8563159	8565843	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG002_chrY_T0000596;gene_id=HG002_chrY_G0000161;Parent=HG002_chrY_T0000596;transcript_name=HG002_chrY_T0000596;gene_name=ENSG00000173357;ID=intron:HG002_chrY_T0000596:1;Name=ENSG00000173357;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8565844	8566021	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG002_chrY_T0000596;gene_id=HG002_chrY_G0000161;Parent=HG002_chrY_T0000596;transcript_name=HG002_chrY_T0000596;gene_name=ENSG00000173357;ID=exon:HG002_chrY_T0000596:2;Name=ENSG00000173357;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8566022	8567906	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG002_chrY_T0000596;gene_id=HG002_chrY_G0000161;Parent=HG002_chrY_T0000596;transcript_name=HG002_chrY_T0000596;gene_name=ENSG00000173357;ID=intron:HG002_chrY_T0000596:2;Name=ENSG00000173357;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8567907	8568059	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG002_chrY_T0000596;gene_id=HG002_chrY_G0000161;Parent=HG002_chrY_T0000596;transcript_name=HG002_chrY_T0000596;gene_name=ENSG00000173357;ID=exon:HG002_chrY_T0000596:3;Name=ENSG00000173357;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8568060	8570053	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG002_chrY_T0000596;gene_id=HG002_chrY_G0000161;Parent=HG002_chrY_T0000596;transcript_name=HG002_chrY_T0000596;gene_name=ENSG00000173357;ID=intron:HG002_chrY_T0000596:3;Name=ENSG00000173357;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8570054	8570165	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG002_chrY_T0000596;gene_id=HG002_chrY_G0000161;Parent=HG002_chrY_T0000596;transcript_name=HG002_chrY_T0000596;gene_name=ENSG00000173357;ID=exon:HG002_chrY_T0000596:4;Name=ENSG00000173357;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8570166	8571044	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG002_chrY_T0000596;gene_id=HG002_chrY_G0000161;Parent=HG002_chrY_T0000596;transcript_name=HG002_chrY_T0000596;gene_name=ENSG00000173357;ID=intron:HG002_chrY_T0000596:4;Name=ENSG00000173357;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8571045	8571155	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG002_chrY_T0000596;gene_id=HG002_chrY_G0000161;Parent=HG002_chrY_T0000596;transcript_name=HG002_chrY_T0000596;gene_name=ENSG00000173357;ID=exon:HG002_chrY_T0000596:5;Name=ENSG00000173357;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8571156	8571236	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG002_chrY_T0000596;gene_id=HG002_chrY_G0000161;Parent=HG002_chrY_T0000596;transcript_name=HG002_chrY_T0000596;gene_name=ENSG00000173357;ID=intron:HG002_chrY_T0000596:5;Name=ENSG00000173357;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8571237	8571325	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG002_chrY_T0000596;gene_id=HG002_chrY_G0000161;Parent=HG002_chrY_T0000596;transcript_name=HG002_chrY_T0000596;gene_name=ENSG00000173357;ID=exon:HG002_chrY_T0000596:6;Name=ENSG00000173357;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8571326	8571731	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG002_chrY_T0000596;gene_id=HG002_chrY_G0000161;Parent=HG002_chrY_T0000596;transcript_name=HG002_chrY_T0000596;gene_name=ENSG00000173357;ID=intron:HG002_chrY_T0000596:6;Name=ENSG00000173357;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8571732	8572034	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG002_chrY_T0000596;gene_id=HG002_chrY_G0000161;Parent=HG002_chrY_T0000596;transcript_name=HG002_chrY_T0000596;gene_name=ENSG00000173357;ID=exon:HG002_chrY_T0000596:7;Name=ENSG00000173357;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8565909	8570116	.	+	.	source_gene_common_name=ENSG00000290342;source_gene=ENSG00000290342.1;gene_id=HG002_chrY_G0000162;gene_biotype=lncRNA;gene_name=ENSG00000290342;gene_sources=liftoff;ID=HG002_chrY_G0000162;Name=ENSG00000290342
HG002_chrY	CAT	transcript	8565909	8570116	1000	+	.	source_transcript=ENST00000311828.7;source_transcript_name=ENST00000311828;source_gene=ENSG00000290342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000311828.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000311828.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290342;transcript_id=HG002_chrY_T0000597;gene_id=HG002_chrY_G0000162;Parent=HG002_chrY_G0000162;transcript_name=HG002_chrY_T0000597;gene_name=ENSG00000290342;ID=HG002_chrY_T0000597;Name=ENSG00000290342
HG002_chrY	CAT	exon	8565909	8566021	.	+	.	source_transcript=ENST00000311828.7;source_transcript_name=ENST00000311828;source_gene=ENSG00000290342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000311828.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000311828.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290342;transcript_id=HG002_chrY_T0000597;gene_id=HG002_chrY_G0000162;Parent=HG002_chrY_T0000597;transcript_name=HG002_chrY_T0000597;gene_name=ENSG00000290342;ID=exon:HG002_chrY_T0000597:0;Name=ENSG00000290342;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8566022	8567906	.	+	.	source_transcript=ENST00000311828.7;source_transcript_name=ENST00000311828;source_gene=ENSG00000290342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000311828.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000311828.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290342;transcript_id=HG002_chrY_T0000597;gene_id=HG002_chrY_G0000162;Parent=HG002_chrY_T0000597;transcript_name=HG002_chrY_T0000597;gene_name=ENSG00000290342;ID=intron:HG002_chrY_T0000597:0;Name=ENSG00000290342;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8567907	8568059	.	+	.	source_transcript=ENST00000311828.7;source_transcript_name=ENST00000311828;source_gene=ENSG00000290342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000311828.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000311828.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290342;transcript_id=HG002_chrY_T0000597;gene_id=HG002_chrY_G0000162;Parent=HG002_chrY_T0000597;transcript_name=HG002_chrY_T0000597;gene_name=ENSG00000290342;ID=exon:HG002_chrY_T0000597:1;Name=ENSG00000290342;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8568060	8570053	.	+	.	source_transcript=ENST00000311828.7;source_transcript_name=ENST00000311828;source_gene=ENSG00000290342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000311828.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000311828.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290342;transcript_id=HG002_chrY_T0000597;gene_id=HG002_chrY_G0000162;Parent=HG002_chrY_T0000597;transcript_name=HG002_chrY_T0000597;gene_name=ENSG00000290342;ID=intron:HG002_chrY_T0000597:1;Name=ENSG00000290342;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8570054	8570116	.	+	.	source_transcript=ENST00000311828.7;source_transcript_name=ENST00000311828;source_gene=ENSG00000290342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000311828.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000311828.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290342;transcript_id=HG002_chrY_T0000597;gene_id=HG002_chrY_G0000162;Parent=HG002_chrY_T0000597;transcript_name=HG002_chrY_T0000597;gene_name=ENSG00000290342;ID=exon:HG002_chrY_T0000597:2;Name=ENSG00000290342;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8571232	8578664	.	-	.	source_gene_common_name=ENSG00000301122;source_gene=ENSG00000301122.1;alternative_source_transcripts=ENST00000776361.1,ENST00000776361.1;gene_id=HG002_chrY_G0000163;gene_biotype=lncRNA;gene_name=ENSG00000301122;gene_sources=liftoff;ID=HG002_chrY_G0000163;Name=ENSG00000301122
HG002_chrY	CAT	transcript	8571232	8574772	1000	-	.	source_transcript=ENST00000776361.1;source_transcript_name=ENST00000776361;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776361.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776361.1;transcript_score=299.923;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776361.1,ENST00000776361.1;transcript_id=HG002_chrY_T0000598;gene_id=HG002_chrY_G0000163;Parent=HG002_chrY_G0000163;transcript_name=HG002_chrY_T0000598;gene_name=ENSG00000301122;ID=HG002_chrY_T0000598;Name=ENSG00000301122
HG002_chrY	CAT	exon	8571232	8572004	.	-	.	source_transcript=ENST00000776361.1;source_transcript_name=ENST00000776361;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776361.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776361.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776361.1,ENST00000776361.1;transcript_id=HG002_chrY_T0000598;gene_id=HG002_chrY_G0000163;Parent=HG002_chrY_T0000598;transcript_name=HG002_chrY_T0000598;gene_name=ENSG00000301122;ID=exon:HG002_chrY_T0000598:0;Name=ENSG00000301122;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8572005	8574246	.	-	.	source_transcript=ENST00000776361.1;source_transcript_name=ENST00000776361;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776361.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776361.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776361.1,ENST00000776361.1;transcript_id=HG002_chrY_T0000598;gene_id=HG002_chrY_G0000163;Parent=HG002_chrY_T0000598;transcript_name=HG002_chrY_T0000598;gene_name=ENSG00000301122;ID=intron:HG002_chrY_T0000598:0;Name=ENSG00000301122;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8574247	8574772	.	-	.	source_transcript=ENST00000776361.1;source_transcript_name=ENST00000776361;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776361.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776361.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776361.1,ENST00000776361.1;transcript_id=HG002_chrY_T0000598;gene_id=HG002_chrY_G0000163;Parent=HG002_chrY_T0000598;transcript_name=HG002_chrY_T0000598;gene_name=ENSG00000301122;ID=exon:HG002_chrY_T0000598:1;Name=ENSG00000301122;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8571638	8578664	1000	-	.	source_transcript=ENST00000776360.1;source_transcript_name=ENST00000776360;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776360.1;transcript_score=299.906;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776360.1,ENST00000776360.1;transcript_id=HG002_chrY_T0000599;gene_id=HG002_chrY_G0000163;Parent=HG002_chrY_G0000163;transcript_name=HG002_chrY_T0000599;gene_name=ENSG00000301122;ID=HG002_chrY_T0000599;Name=ENSG00000301122
HG002_chrY	CAT	exon	8571638	8572004	.	-	.	source_transcript=ENST00000776360.1;source_transcript_name=ENST00000776360;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776360.1;transcript_score=299.906;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776360.1,ENST00000776360.1;transcript_id=HG002_chrY_T0000599;gene_id=HG002_chrY_G0000163;Parent=HG002_chrY_T0000599;transcript_name=HG002_chrY_T0000599;gene_name=ENSG00000301122;ID=exon:HG002_chrY_T0000599:0;Name=ENSG00000301122;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8572005	8574246	.	-	.	source_transcript=ENST00000776360.1;source_transcript_name=ENST00000776360;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776360.1;transcript_score=299.906;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776360.1,ENST00000776360.1;transcript_id=HG002_chrY_T0000599;gene_id=HG002_chrY_G0000163;Parent=HG002_chrY_T0000599;transcript_name=HG002_chrY_T0000599;gene_name=ENSG00000301122;ID=intron:HG002_chrY_T0000599:0;Name=ENSG00000301122;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8574247	8574824	.	-	.	source_transcript=ENST00000776360.1;source_transcript_name=ENST00000776360;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776360.1;transcript_score=299.906;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776360.1,ENST00000776360.1;transcript_id=HG002_chrY_T0000599;gene_id=HG002_chrY_G0000163;Parent=HG002_chrY_T0000599;transcript_name=HG002_chrY_T0000599;gene_name=ENSG00000301122;ID=exon:HG002_chrY_T0000599:1;Name=ENSG00000301122;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8574825	8578548	.	-	.	source_transcript=ENST00000776360.1;source_transcript_name=ENST00000776360;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776360.1;transcript_score=299.906;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776360.1,ENST00000776360.1;transcript_id=HG002_chrY_T0000599;gene_id=HG002_chrY_G0000163;Parent=HG002_chrY_T0000599;transcript_name=HG002_chrY_T0000599;gene_name=ENSG00000301122;ID=intron:HG002_chrY_T0000599:1;Name=ENSG00000301122;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8578549	8578664	.	-	.	source_transcript=ENST00000776360.1;source_transcript_name=ENST00000776360;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776360.1;transcript_score=299.906;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776360.1,ENST00000776360.1;transcript_id=HG002_chrY_T0000599;gene_id=HG002_chrY_G0000163;Parent=HG002_chrY_T0000599;transcript_name=HG002_chrY_T0000599;gene_name=ENSG00000301122;ID=exon:HG002_chrY_T0000599:2;Name=ENSG00000301122;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8587030	8587415	.	-	.	source_gene_common_name=ENSG00000273731;source_gene=ENSG00000273731.1;alternative_source_transcripts=ENST00000614700.1,ENST00000614700.1;gene_id=HG002_chrY_G0000164;gene_biotype=processed_pseudogene;gene_name=ENSG00000273731;gene_sources=liftoff;ID=HG002_chrY_G0000164;Name=ENSG00000273731
HG002_chrY	CAT	transcript	8587030	8587415	1000	-	.	source_transcript=ENST00000614700.1;source_transcript_name=ENST00000614700;source_gene=ENSG00000273731.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273731.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000614700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614700.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273731;alternative_source_transcripts=ENST00000614700.1,ENST00000614700.1;transcript_id=HG002_chrY_T0000600;gene_id=HG002_chrY_G0000164;Parent=HG002_chrY_G0000164;transcript_name=HG002_chrY_T0000600;gene_name=ENSG00000273731;ID=HG002_chrY_T0000600;Name=ENSG00000273731
HG002_chrY	CAT	exon	8587030	8587415	.	-	.	source_transcript=ENST00000614700.1;source_transcript_name=ENST00000614700;source_gene=ENSG00000273731.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273731.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000614700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614700.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273731;alternative_source_transcripts=ENST00000614700.1,ENST00000614700.1;transcript_id=HG002_chrY_T0000600;gene_id=HG002_chrY_G0000164;Parent=HG002_chrY_T0000600;transcript_name=HG002_chrY_T0000600;gene_name=ENSG00000273731;ID=exon:HG002_chrY_T0000600:0;Name=ENSG00000273731;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8627720	8630064	.	-	.	source_gene_common_name=ENSG00000230025;source_gene=ENSG00000230025.1;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;gene_id=HG002_chrY_G0000165;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000230025;gene_sources=liftoff;ID=HG002_chrY_G0000165;Name=ENSG00000230025
HG002_chrY	CAT	transcript	8627720	8630064	1000	-	.	source_transcript=ENST00000434308.1;source_transcript_name=ENST00000434308;source_gene=ENSG00000230025.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230025.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434308.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230025;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;transcript_id=HG002_chrY_T0000601;gene_id=HG002_chrY_G0000165;Parent=HG002_chrY_G0000165;transcript_name=HG002_chrY_T0000601;gene_name=ENSG00000230025;ID=HG002_chrY_T0000601;Name=ENSG00000230025
HG002_chrY	CAT	exon	8627720	8627863	.	-	.	source_transcript=ENST00000434308.1;source_transcript_name=ENST00000434308;source_gene=ENSG00000230025.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230025.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230025;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;transcript_id=HG002_chrY_T0000601;gene_id=HG002_chrY_G0000165;Parent=HG002_chrY_T0000601;transcript_name=HG002_chrY_T0000601;gene_name=ENSG00000230025;ID=exon:HG002_chrY_T0000601:0;Name=ENSG00000230025;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8627864	8627955	.	-	.	source_transcript=ENST00000434308.1;source_transcript_name=ENST00000434308;source_gene=ENSG00000230025.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230025.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230025;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;transcript_id=HG002_chrY_T0000601;gene_id=HG002_chrY_G0000165;Parent=HG002_chrY_T0000601;transcript_name=HG002_chrY_T0000601;gene_name=ENSG00000230025;ID=intron:HG002_chrY_T0000601:0;Name=ENSG00000230025;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8627956	8628000	.	-	.	source_transcript=ENST00000434308.1;source_transcript_name=ENST00000434308;source_gene=ENSG00000230025.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230025.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230025;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;transcript_id=HG002_chrY_T0000601;gene_id=HG002_chrY_G0000165;Parent=HG002_chrY_T0000601;transcript_name=HG002_chrY_T0000601;gene_name=ENSG00000230025;ID=exon:HG002_chrY_T0000601:1;Name=ENSG00000230025;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8628001	8629695	.	-	.	source_transcript=ENST00000434308.1;source_transcript_name=ENST00000434308;source_gene=ENSG00000230025.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230025.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230025;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;transcript_id=HG002_chrY_T0000601;gene_id=HG002_chrY_G0000165;Parent=HG002_chrY_T0000601;transcript_name=HG002_chrY_T0000601;gene_name=ENSG00000230025;ID=intron:HG002_chrY_T0000601:1;Name=ENSG00000230025;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8629696	8630064	.	-	.	source_transcript=ENST00000434308.1;source_transcript_name=ENST00000434308;source_gene=ENSG00000230025.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230025.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230025;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;transcript_id=HG002_chrY_T0000601;gene_id=HG002_chrY_G0000165;Parent=HG002_chrY_T0000601;transcript_name=HG002_chrY_T0000601;gene_name=ENSG00000230025;ID=exon:HG002_chrY_T0000601:2;Name=ENSG00000230025;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8686562	8695960	.	+	.	source_gene_common_name=OFD1P3Y;source_gene=ENSG00000231988.1;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;gene_id=HG002_chrY_G0000166;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P3Y;gene_sources=liftoff;ID=HG002_chrY_G0000166;Name=OFD1P3Y
HG002_chrY	CAT	transcript	8686562	8695960	1000	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG002_chrY_T0000602;gene_id=HG002_chrY_G0000166;Parent=HG002_chrY_G0000166;transcript_name=HG002_chrY_T0000602;gene_name=OFD1P3Y;ID=HG002_chrY_T0000602;Name=OFD1P3Y
HG002_chrY	CAT	exon	8686562	8686698	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG002_chrY_T0000602;gene_id=HG002_chrY_G0000166;Parent=HG002_chrY_T0000602;transcript_name=HG002_chrY_T0000602;gene_name=OFD1P3Y;ID=exon:HG002_chrY_T0000602:0;Name=OFD1P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8686699	8687022	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG002_chrY_T0000602;gene_id=HG002_chrY_G0000166;Parent=HG002_chrY_T0000602;transcript_name=HG002_chrY_T0000602;gene_name=OFD1P3Y;ID=intron:HG002_chrY_T0000602:0;Name=OFD1P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8687023	8687197	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG002_chrY_T0000602;gene_id=HG002_chrY_G0000166;Parent=HG002_chrY_T0000602;transcript_name=HG002_chrY_T0000602;gene_name=OFD1P3Y;ID=exon:HG002_chrY_T0000602:1;Name=OFD1P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8687198	8690644	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG002_chrY_T0000602;gene_id=HG002_chrY_G0000166;Parent=HG002_chrY_T0000602;transcript_name=HG002_chrY_T0000602;gene_name=OFD1P3Y;ID=intron:HG002_chrY_T0000602:1;Name=OFD1P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8690645	8690760	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG002_chrY_T0000602;gene_id=HG002_chrY_G0000166;Parent=HG002_chrY_T0000602;transcript_name=HG002_chrY_T0000602;gene_name=OFD1P3Y;ID=exon:HG002_chrY_T0000602:2;Name=OFD1P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8690761	8692428	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG002_chrY_T0000602;gene_id=HG002_chrY_G0000166;Parent=HG002_chrY_T0000602;transcript_name=HG002_chrY_T0000602;gene_name=OFD1P3Y;ID=intron:HG002_chrY_T0000602:2;Name=OFD1P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8692429	8692502	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG002_chrY_T0000602;gene_id=HG002_chrY_G0000166;Parent=HG002_chrY_T0000602;transcript_name=HG002_chrY_T0000602;gene_name=OFD1P3Y;ID=exon:HG002_chrY_T0000602:3;Name=OFD1P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8692503	8693647	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG002_chrY_T0000602;gene_id=HG002_chrY_G0000166;Parent=HG002_chrY_T0000602;transcript_name=HG002_chrY_T0000602;gene_name=OFD1P3Y;ID=intron:HG002_chrY_T0000602:3;Name=OFD1P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8693648	8693739	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG002_chrY_T0000602;gene_id=HG002_chrY_G0000166;Parent=HG002_chrY_T0000602;transcript_name=HG002_chrY_T0000602;gene_name=OFD1P3Y;ID=exon:HG002_chrY_T0000602:4;Name=OFD1P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8693740	8695771	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG002_chrY_T0000602;gene_id=HG002_chrY_G0000166;Parent=HG002_chrY_T0000602;transcript_name=HG002_chrY_T0000602;gene_name=OFD1P3Y;ID=intron:HG002_chrY_T0000602:4;Name=OFD1P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8695772	8695960	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG002_chrY_T0000602;gene_id=HG002_chrY_G0000166;Parent=HG002_chrY_T0000602;transcript_name=HG002_chrY_T0000602;gene_name=OFD1P3Y;ID=exon:HG002_chrY_T0000602:5;Name=OFD1P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8772078	8773695	.	-	.	source_gene_common_name=CDY3P;source_gene=ENSG00000232235.1;alternative_source_transcripts=ENST00000454543.1,ENST00000454543.1;gene_id=HG002_chrY_G0000167;gene_biotype=processed_pseudogene;gene_name=CDY3P;gene_sources=liftoff;ID=HG002_chrY_G0000167;Name=CDY3P
HG002_chrY	CAT	transcript	8772078	8773695	1000	-	.	source_transcript=ENST00000454543.1;source_transcript_name=CDY3P-201;source_gene=ENSG00000232235.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232235.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454543.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY3P;alternative_source_transcripts=ENST00000454543.1,ENST00000454543.1;transcript_id=HG002_chrY_T0000603;gene_id=HG002_chrY_G0000167;Parent=HG002_chrY_G0000167;transcript_name=HG002_chrY_T0000603;gene_name=CDY3P;ID=HG002_chrY_T0000603;Name=CDY3P
HG002_chrY	CAT	exon	8772078	8773695	.	-	.	source_transcript=ENST00000454543.1;source_transcript_name=CDY3P-201;source_gene=ENSG00000232235.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232235.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454543.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY3P;alternative_source_transcripts=ENST00000454543.1,ENST00000454543.1;transcript_id=HG002_chrY_T0000603;gene_id=HG002_chrY_G0000167;Parent=HG002_chrY_T0000603;transcript_name=HG002_chrY_T0000603;gene_name=CDY3P;ID=exon:HG002_chrY_T0000603:0;Name=CDY3P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8789687	8791796	.	+	.	source_gene_common_name=USP9YP22;source_gene=ENSG00000224408.1;alternative_source_transcripts=ENST00000438971.1,ENST00000438971.1;gene_id=HG002_chrY_G0000168;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP22;gene_sources=liftoff;ID=HG002_chrY_G0000168;Name=USP9YP22
HG002_chrY	CAT	transcript	8789687	8791796	1000	+	.	source_transcript=ENST00000438971.1;source_transcript_name=USP9YP22-201;source_gene=ENSG00000224408.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224408.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438971.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438971.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP22;alternative_source_transcripts=ENST00000438971.1,ENST00000438971.1;transcript_id=HG002_chrY_T0000604;gene_id=HG002_chrY_G0000168;Parent=HG002_chrY_G0000168;transcript_name=HG002_chrY_T0000604;gene_name=USP9YP22;ID=HG002_chrY_T0000604;Name=USP9YP22
HG002_chrY	CAT	exon	8789687	8789778	.	+	.	source_transcript=ENST00000438971.1;source_transcript_name=USP9YP22-201;source_gene=ENSG00000224408.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224408.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438971.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438971.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP22;alternative_source_transcripts=ENST00000438971.1,ENST00000438971.1;transcript_id=HG002_chrY_T0000604;gene_id=HG002_chrY_G0000168;Parent=HG002_chrY_T0000604;transcript_name=HG002_chrY_T0000604;gene_name=USP9YP22;ID=exon:HG002_chrY_T0000604:0;Name=USP9YP22;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8789779	8791594	.	+	.	source_transcript=ENST00000438971.1;source_transcript_name=USP9YP22-201;source_gene=ENSG00000224408.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224408.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438971.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438971.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP22;alternative_source_transcripts=ENST00000438971.1,ENST00000438971.1;transcript_id=HG002_chrY_T0000604;gene_id=HG002_chrY_G0000168;Parent=HG002_chrY_T0000604;transcript_name=HG002_chrY_T0000604;gene_name=USP9YP22;ID=intron:HG002_chrY_T0000604:0;Name=USP9YP22;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8791595	8791796	.	+	.	source_transcript=ENST00000438971.1;source_transcript_name=USP9YP22-201;source_gene=ENSG00000224408.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224408.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438971.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438971.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP22;alternative_source_transcripts=ENST00000438971.1,ENST00000438971.1;transcript_id=HG002_chrY_T0000604;gene_id=HG002_chrY_G0000168;Parent=HG002_chrY_T0000604;transcript_name=HG002_chrY_T0000604;gene_name=USP9YP22;ID=exon:HG002_chrY_T0000604:1;Name=USP9YP22;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8795622	8810614	.	-	.	source_gene_common_name=USP9YP4;source_gene=ENSG00000238154.1;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;gene_id=HG002_chrY_G0000169;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP4;gene_sources=liftoff;ID=HG002_chrY_G0000169;Name=USP9YP4
HG002_chrY	CAT	transcript	8795622	8810614	1000	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG002_chrY_T0000605;gene_id=HG002_chrY_G0000169;Parent=HG002_chrY_G0000169;transcript_name=HG002_chrY_T0000605;gene_name=USP9YP4;ID=HG002_chrY_T0000605;Name=USP9YP4
HG002_chrY	CAT	exon	8795622	8795745	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG002_chrY_T0000605;gene_id=HG002_chrY_G0000169;Parent=HG002_chrY_T0000605;transcript_name=HG002_chrY_T0000605;gene_name=USP9YP4;ID=exon:HG002_chrY_T0000605:0;Name=USP9YP4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8795746	8796180	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG002_chrY_T0000605;gene_id=HG002_chrY_G0000169;Parent=HG002_chrY_T0000605;transcript_name=HG002_chrY_T0000605;gene_name=USP9YP4;ID=intron:HG002_chrY_T0000605:0;Name=USP9YP4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8796181	8797065	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG002_chrY_T0000605;gene_id=HG002_chrY_G0000169;Parent=HG002_chrY_T0000605;transcript_name=HG002_chrY_T0000605;gene_name=USP9YP4;ID=exon:HG002_chrY_T0000605:1;Name=USP9YP4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8797066	8799584	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG002_chrY_T0000605;gene_id=HG002_chrY_G0000169;Parent=HG002_chrY_T0000605;transcript_name=HG002_chrY_T0000605;gene_name=USP9YP4;ID=intron:HG002_chrY_T0000605:1;Name=USP9YP4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8799585	8799708	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG002_chrY_T0000605;gene_id=HG002_chrY_G0000169;Parent=HG002_chrY_T0000605;transcript_name=HG002_chrY_T0000605;gene_name=USP9YP4;ID=exon:HG002_chrY_T0000605:2;Name=USP9YP4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8799709	8805084	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG002_chrY_T0000605;gene_id=HG002_chrY_G0000169;Parent=HG002_chrY_T0000605;transcript_name=HG002_chrY_T0000605;gene_name=USP9YP4;ID=intron:HG002_chrY_T0000605:2;Name=USP9YP4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8805085	8805274	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG002_chrY_T0000605;gene_id=HG002_chrY_G0000169;Parent=HG002_chrY_T0000605;transcript_name=HG002_chrY_T0000605;gene_name=USP9YP4;ID=exon:HG002_chrY_T0000605:3;Name=USP9YP4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8805275	8807386	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG002_chrY_T0000605;gene_id=HG002_chrY_G0000169;Parent=HG002_chrY_T0000605;transcript_name=HG002_chrY_T0000605;gene_name=USP9YP4;ID=intron:HG002_chrY_T0000605:3;Name=USP9YP4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8807387	8807593	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG002_chrY_T0000605;gene_id=HG002_chrY_G0000169;Parent=HG002_chrY_T0000605;transcript_name=HG002_chrY_T0000605;gene_name=USP9YP4;ID=exon:HG002_chrY_T0000605:4;Name=USP9YP4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8807594	8810399	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG002_chrY_T0000605;gene_id=HG002_chrY_G0000169;Parent=HG002_chrY_T0000605;transcript_name=HG002_chrY_T0000605;gene_name=USP9YP4;ID=intron:HG002_chrY_T0000605:4;Name=USP9YP4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8810400	8810614	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG002_chrY_T0000605;gene_id=HG002_chrY_G0000169;Parent=HG002_chrY_T0000605;transcript_name=HG002_chrY_T0000605;gene_name=USP9YP4;ID=exon:HG002_chrY_T0000605:5;Name=USP9YP4;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8836924	8837256	.	+	.	source_gene_common_name=ELOCP4;source_gene=ENSG00000232924.1;alternative_source_transcripts=ENST00000420090.1,ENST00000420090.1;gene_id=HG002_chrY_G0000170;gene_biotype=processed_pseudogene;gene_name=ELOCP4;gene_sources=liftoff;ID=HG002_chrY_G0000170;Name=ELOCP4
HG002_chrY	CAT	transcript	8836924	8837256	1000	+	.	source_transcript=ENST00000420090.1;source_transcript_name=ELOCP4-201;source_gene=ENSG00000232924.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232924.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420090.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP4;alternative_source_transcripts=ENST00000420090.1,ENST00000420090.1;transcript_id=HG002_chrY_T0000606;gene_id=HG002_chrY_G0000170;Parent=HG002_chrY_G0000170;transcript_name=HG002_chrY_T0000606;gene_name=ELOCP4;ID=HG002_chrY_T0000606;Name=ELOCP4
HG002_chrY	CAT	exon	8836924	8837256	.	+	.	source_transcript=ENST00000420090.1;source_transcript_name=ELOCP4-201;source_gene=ENSG00000232924.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232924.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420090.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP4;alternative_source_transcripts=ENST00000420090.1,ENST00000420090.1;transcript_id=HG002_chrY_T0000606;gene_id=HG002_chrY_G0000170;Parent=HG002_chrY_T0000606;transcript_name=HG002_chrY_T0000606;gene_name=ELOCP4;ID=exon:HG002_chrY_T0000606:0;Name=ELOCP4;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8898258	8917528	.	+	.	source_gene_common_name=ENSG00000299745;source_gene=ENSG00000299745.1;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;gene_id=HG002_chrY_G0000171;gene_biotype=lncRNA;gene_name=ENSG00000299745;gene_sources=liftoff;ID=HG002_chrY_G0000171;Name=ENSG00000299745
HG002_chrY	CAT	transcript	8898258	8917528	1000	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=HG002_chrY_T0000607;gene_id=HG002_chrY_G0000171;Parent=HG002_chrY_G0000171;transcript_name=HG002_chrY_T0000607;gene_name=ENSG00000299745;ID=HG002_chrY_T0000607;Name=ENSG00000299745
HG002_chrY	CAT	exon	8898258	8898570	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=HG002_chrY_T0000607;gene_id=HG002_chrY_G0000171;Parent=HG002_chrY_T0000607;transcript_name=HG002_chrY_T0000607;gene_name=ENSG00000299745;ID=exon:HG002_chrY_T0000607:0;Name=ENSG00000299745;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8898571	8899815	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=HG002_chrY_T0000607;gene_id=HG002_chrY_G0000171;Parent=HG002_chrY_T0000607;transcript_name=HG002_chrY_T0000607;gene_name=ENSG00000299745;ID=intron:HG002_chrY_T0000607:0;Name=ENSG00000299745;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8899816	8899890	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=HG002_chrY_T0000607;gene_id=HG002_chrY_G0000171;Parent=HG002_chrY_T0000607;transcript_name=HG002_chrY_T0000607;gene_name=ENSG00000299745;ID=exon:HG002_chrY_T0000607:1;Name=ENSG00000299745;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8899891	8910558	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=HG002_chrY_T0000607;gene_id=HG002_chrY_G0000171;Parent=HG002_chrY_T0000607;transcript_name=HG002_chrY_T0000607;gene_name=ENSG00000299745;ID=intron:HG002_chrY_T0000607:1;Name=ENSG00000299745;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8910559	8910671	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=HG002_chrY_T0000607;gene_id=HG002_chrY_G0000171;Parent=HG002_chrY_T0000607;transcript_name=HG002_chrY_T0000607;gene_name=ENSG00000299745;ID=exon:HG002_chrY_T0000607:2;Name=ENSG00000299745;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8910672	8914260	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=HG002_chrY_T0000607;gene_id=HG002_chrY_G0000171;Parent=HG002_chrY_T0000607;transcript_name=HG002_chrY_T0000607;gene_name=ENSG00000299745;ID=intron:HG002_chrY_T0000607:2;Name=ENSG00000299745;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8914261	8914428	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=HG002_chrY_T0000607;gene_id=HG002_chrY_G0000171;Parent=HG002_chrY_T0000607;transcript_name=HG002_chrY_T0000607;gene_name=ENSG00000299745;ID=exon:HG002_chrY_T0000607:3;Name=ENSG00000299745;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8914429	8917161	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=HG002_chrY_T0000607;gene_id=HG002_chrY_G0000171;Parent=HG002_chrY_T0000607;transcript_name=HG002_chrY_T0000607;gene_name=ENSG00000299745;ID=intron:HG002_chrY_T0000607:3;Name=ENSG00000299745;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8917162	8917528	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=HG002_chrY_T0000607;gene_id=HG002_chrY_G0000171;Parent=HG002_chrY_T0000607;transcript_name=HG002_chrY_T0000607;gene_name=ENSG00000299745;ID=exon:HG002_chrY_T0000607:4;Name=ENSG00000299745;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8914633	8930901	.	-	.	source_gene_common_name=ENSG00000299768;source_gene=ENSG00000299768.1;gene_id=HG002_chrY_G0000172;gene_biotype=lncRNA;gene_name=ENSG00000299768;gene_sources=liftoff;ID=HG002_chrY_G0000172;Name=ENSG00000299768
HG002_chrY	CAT	transcript	8914633	8930901	1000	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000608;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_G0000172;transcript_name=HG002_chrY_T0000608;gene_name=ENSG00000299768;ID=HG002_chrY_T0000608;Name=ENSG00000299768
HG002_chrY	CAT	exon	8914633	8914850	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000608;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000608;transcript_name=HG002_chrY_T0000608;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000608:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8914851	8917857	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000608;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000608;transcript_name=HG002_chrY_T0000608;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000608:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8917858	8917946	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000608;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000608;transcript_name=HG002_chrY_T0000608;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000608:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8917947	8919725	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000608;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000608;transcript_name=HG002_chrY_T0000608;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000608:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8919726	8919836	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000608;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000608;transcript_name=HG002_chrY_T0000608;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000608:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8919837	8920791	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000608;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000608;transcript_name=HG002_chrY_T0000608;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000608:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8920792	8920906	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000608;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000608;transcript_name=HG002_chrY_T0000608;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000608:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8920907	8922954	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000608;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000608;transcript_name=HG002_chrY_T0000608;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000608:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8922955	8923107	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000608;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000608;transcript_name=HG002_chrY_T0000608;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000608:4;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8923108	8925007	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000608;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000608;transcript_name=HG002_chrY_T0000608;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000608:4;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8925008	8925185	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000608;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000608;transcript_name=HG002_chrY_T0000608;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000608:5;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8925186	8928200	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000608;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000608;transcript_name=HG002_chrY_T0000608;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000608:5;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8928201	8928304	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000608;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000608;transcript_name=HG002_chrY_T0000608;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000608:6;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8928305	8928778	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000608;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000608;transcript_name=HG002_chrY_T0000608;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000608:6;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8928779	8928891	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000608;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000608;transcript_name=HG002_chrY_T0000608;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000608:7;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8928892	8930746	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000608;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000608;transcript_name=HG002_chrY_T0000608;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000608:7;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8930747	8930901	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000608;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000608;transcript_name=HG002_chrY_T0000608;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000608:8;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8914635	8930821	1000	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000609;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_G0000172;transcript_name=HG002_chrY_T0000609;gene_name=ENSG00000299768;ID=HG002_chrY_T0000609;Name=ENSG00000299768
HG002_chrY	CAT	exon	8914635	8914850	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000609;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000609;transcript_name=HG002_chrY_T0000609;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000609:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8914851	8917857	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000609;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000609;transcript_name=HG002_chrY_T0000609;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000609:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8917858	8917946	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000609;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000609;transcript_name=HG002_chrY_T0000609;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000609:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8917947	8918031	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000609;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000609;transcript_name=HG002_chrY_T0000609;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000609:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8918032	8918142	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000609;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000609;transcript_name=HG002_chrY_T0000609;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000609:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8918143	8919725	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000609;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000609;transcript_name=HG002_chrY_T0000609;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000609:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8919726	8919836	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000609;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000609;transcript_name=HG002_chrY_T0000609;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000609:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8919837	8920791	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000609;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000609;transcript_name=HG002_chrY_T0000609;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000609:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8920792	8920906	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000609;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000609;transcript_name=HG002_chrY_T0000609;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000609:4;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8920907	8922954	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000609;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000609;transcript_name=HG002_chrY_T0000609;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000609:4;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8922955	8923107	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000609;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000609;transcript_name=HG002_chrY_T0000609;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000609:5;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8923108	8925007	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000609;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000609;transcript_name=HG002_chrY_T0000609;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000609:5;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8925008	8925185	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000609;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000609;transcript_name=HG002_chrY_T0000609;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000609:6;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8925186	8928200	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000609;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000609;transcript_name=HG002_chrY_T0000609;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000609:6;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8928201	8928304	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000609;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000609;transcript_name=HG002_chrY_T0000609;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000609:7;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8928305	8928778	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000609;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000609;transcript_name=HG002_chrY_T0000609;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000609:7;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8928779	8928891	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000609;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000609;transcript_name=HG002_chrY_T0000609;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000609:8;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8928892	8930692	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000609;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000609;transcript_name=HG002_chrY_T0000609;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000609:8;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8930693	8930821	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000609;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000609;transcript_name=HG002_chrY_T0000609;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000609:9;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8914635	8930859	1000	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000610;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_G0000172;transcript_name=HG002_chrY_T0000610;gene_name=ENSG00000299768;ID=HG002_chrY_T0000610;Name=ENSG00000299768
HG002_chrY	CAT	exon	8914635	8914850	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000610;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000610;transcript_name=HG002_chrY_T0000610;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000610:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8914851	8917857	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000610;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000610;transcript_name=HG002_chrY_T0000610;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000610:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8917858	8917946	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000610;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000610;transcript_name=HG002_chrY_T0000610;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000610:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8917947	8919725	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000610;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000610;transcript_name=HG002_chrY_T0000610;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000610:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8919726	8919836	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000610;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000610;transcript_name=HG002_chrY_T0000610;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000610:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8919837	8922954	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000610;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000610;transcript_name=HG002_chrY_T0000610;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000610:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8922955	8923107	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000610;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000610;transcript_name=HG002_chrY_T0000610;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000610:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8923108	8925007	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000610;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000610;transcript_name=HG002_chrY_T0000610;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000610:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8925008	8925185	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000610;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000610;transcript_name=HG002_chrY_T0000610;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000610:4;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8925186	8928200	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000610;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000610;transcript_name=HG002_chrY_T0000610;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000610:4;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8928201	8928304	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000610;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000610;transcript_name=HG002_chrY_T0000610;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000610:5;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8928305	8928778	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000610;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000610;transcript_name=HG002_chrY_T0000610;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000610:5;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8928779	8928891	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000610;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000610;transcript_name=HG002_chrY_T0000610;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000610:6;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8928892	8930746	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000610;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000610;transcript_name=HG002_chrY_T0000610;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000610:6;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8930747	8930859	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000610;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000610;transcript_name=HG002_chrY_T0000610;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000610:7;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8914635	8930859	1000	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000611;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_G0000172;transcript_name=HG002_chrY_T0000611;gene_name=ENSG00000299768;ID=HG002_chrY_T0000611;Name=ENSG00000299768
HG002_chrY	CAT	exon	8914635	8914850	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000611;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000611;transcript_name=HG002_chrY_T0000611;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000611:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8914851	8917857	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000611;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000611;transcript_name=HG002_chrY_T0000611;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000611:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8917858	8917946	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000611;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000611;transcript_name=HG002_chrY_T0000611;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000611:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8917947	8918031	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000611;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000611;transcript_name=HG002_chrY_T0000611;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000611:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8918032	8918142	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000611;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000611;transcript_name=HG002_chrY_T0000611;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000611:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8918143	8919725	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000611;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000611;transcript_name=HG002_chrY_T0000611;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000611:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8919726	8919836	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000611;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000611;transcript_name=HG002_chrY_T0000611;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000611:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8919837	8920791	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000611;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000611;transcript_name=HG002_chrY_T0000611;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000611:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8920792	8920906	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000611;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000611;transcript_name=HG002_chrY_T0000611;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000611:4;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8920907	8922954	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000611;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000611;transcript_name=HG002_chrY_T0000611;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000611:4;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8922955	8923107	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000611;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000611;transcript_name=HG002_chrY_T0000611;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000611:5;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8923108	8925007	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000611;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000611;transcript_name=HG002_chrY_T0000611;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000611:5;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8925008	8925185	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000611;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000611;transcript_name=HG002_chrY_T0000611;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000611:6;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8925186	8928200	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000611;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000611;transcript_name=HG002_chrY_T0000611;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000611:6;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8928201	8928304	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000611;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000611;transcript_name=HG002_chrY_T0000611;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000611:7;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8928305	8928778	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000611;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000611;transcript_name=HG002_chrY_T0000611;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000611:7;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8928779	8928891	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000611;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000611;transcript_name=HG002_chrY_T0000611;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000611:8;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8928892	8930746	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000611;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000611;transcript_name=HG002_chrY_T0000611;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000611:8;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8930747	8930859	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000611;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000611;transcript_name=HG002_chrY_T0000611;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000611:9;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8919477	8930884	1000	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000613;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_G0000172;transcript_name=HG002_chrY_T0000613;gene_name=ENSG00000299768;ID=HG002_chrY_T0000613;Name=ENSG00000299768
HG002_chrY	CAT	exon	8919477	8920906	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000613;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000613;transcript_name=HG002_chrY_T0000613;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000613:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8920907	8922954	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000613;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000613;transcript_name=HG002_chrY_T0000613;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000613:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8922955	8923107	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000613;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000613;transcript_name=HG002_chrY_T0000613;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000613:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8923108	8925007	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000613;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000613;transcript_name=HG002_chrY_T0000613;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000613:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8925008	8925185	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000613;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000613;transcript_name=HG002_chrY_T0000613;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000613:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8925186	8928200	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000613;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000613;transcript_name=HG002_chrY_T0000613;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000613:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8928201	8928304	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000613;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000613;transcript_name=HG002_chrY_T0000613;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000613:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8928305	8928778	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000613;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000613;transcript_name=HG002_chrY_T0000613;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000613:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8928779	8928891	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000613;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000613;transcript_name=HG002_chrY_T0000613;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000613:4;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8928892	8930746	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000613;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000613;transcript_name=HG002_chrY_T0000613;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000613:4;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8930747	8930884	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000613;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000613;transcript_name=HG002_chrY_T0000613;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000613:5;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8924270	8930884	1000	-	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000614;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_G0000172;transcript_name=HG002_chrY_T0000614;gene_name=ENSG00000299768;ID=HG002_chrY_T0000614;Name=ENSG00000299768
HG002_chrY	CAT	exon	8924270	8925185	.	-	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000614;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000614;transcript_name=HG002_chrY_T0000614;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000614:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8925186	8928200	.	-	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000614;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000614;transcript_name=HG002_chrY_T0000614;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000614:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8928201	8928304	.	-	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000614;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000614;transcript_name=HG002_chrY_T0000614;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000614:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8928305	8928778	.	-	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000614;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000614;transcript_name=HG002_chrY_T0000614;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000614:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8928779	8928891	.	-	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000614;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000614;transcript_name=HG002_chrY_T0000614;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000614:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8928892	8930746	.	-	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000614;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000614;transcript_name=HG002_chrY_T0000614;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000614:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8930747	8930884	.	-	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000614;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000614;transcript_name=HG002_chrY_T0000614;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000614:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8927689	8930858	1000	-	.	source_transcript=ENST00000766246.1;source_transcript_name=ENST00000766246;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766246.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766246.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000615;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_G0000172;transcript_name=HG002_chrY_T0000615;gene_name=ENSG00000299768;ID=HG002_chrY_T0000615;Name=ENSG00000299768
HG002_chrY	CAT	exon	8927689	8928304	.	-	.	source_transcript=ENST00000766246.1;source_transcript_name=ENST00000766246;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766246.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000615;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000615;transcript_name=HG002_chrY_T0000615;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000615:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8928305	8928778	.	-	.	source_transcript=ENST00000766246.1;source_transcript_name=ENST00000766246;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766246.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000615;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000615;transcript_name=HG002_chrY_T0000615;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000615:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8928779	8928891	.	-	.	source_transcript=ENST00000766246.1;source_transcript_name=ENST00000766246;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766246.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000615;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000615;transcript_name=HG002_chrY_T0000615;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000615:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8928892	8930746	.	-	.	source_transcript=ENST00000766246.1;source_transcript_name=ENST00000766246;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766246.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000615;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000615;transcript_name=HG002_chrY_T0000615;gene_name=ENSG00000299768;ID=intron:HG002_chrY_T0000615:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8930747	8930858	.	-	.	source_transcript=ENST00000766246.1;source_transcript_name=ENST00000766246;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766246.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG002_chrY_T0000615;gene_id=HG002_chrY_G0000172;Parent=HG002_chrY_T0000615;transcript_name=HG002_chrY_T0000615;gene_name=ENSG00000299768;ID=exon:HG002_chrY_T0000615:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8917146	8928887	.	-	.	source_gene_common_name=RBMY1A3P;source_gene=ENSG00000197038.6;gene_id=HG002_chrY_G0000173;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY1A3P;gene_sources=liftoff;ID=HG002_chrY_G0000173;Name=RBMY1A3P
HG002_chrY	CAT	transcript	8917146	8928887	1000	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG002_chrY_T0000612;gene_id=HG002_chrY_G0000173;Parent=HG002_chrY_G0000173;transcript_name=HG002_chrY_T0000612;gene_name=RBMY1A3P;ID=HG002_chrY_T0000612;Name=RBMY1A3P
HG002_chrY	CAT	exon	8917146	8917447	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG002_chrY_T0000612;gene_id=HG002_chrY_G0000173;Parent=HG002_chrY_T0000612;transcript_name=HG002_chrY_T0000612;gene_name=RBMY1A3P;ID=exon:HG002_chrY_T0000612:0;Name=RBMY1A3P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8917448	8918031	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG002_chrY_T0000612;gene_id=HG002_chrY_G0000173;Parent=HG002_chrY_T0000612;transcript_name=HG002_chrY_T0000612;gene_name=RBMY1A3P;ID=intron:HG002_chrY_T0000612:0;Name=RBMY1A3P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8918032	8918142	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG002_chrY_T0000612;gene_id=HG002_chrY_G0000173;Parent=HG002_chrY_T0000612;transcript_name=HG002_chrY_T0000612;gene_name=RBMY1A3P;ID=exon:HG002_chrY_T0000612:1;Name=RBMY1A3P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8918143	8918640	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG002_chrY_T0000612;gene_id=HG002_chrY_G0000173;Parent=HG002_chrY_T0000612;transcript_name=HG002_chrY_T0000612;gene_name=RBMY1A3P;ID=intron:HG002_chrY_T0000612:1;Name=RBMY1A3P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8918641	8918751	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG002_chrY_T0000612;gene_id=HG002_chrY_G0000173;Parent=HG002_chrY_T0000612;transcript_name=HG002_chrY_T0000612;gene_name=RBMY1A3P;ID=exon:HG002_chrY_T0000612:2;Name=RBMY1A3P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8918752	8919188	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG002_chrY_T0000612;gene_id=HG002_chrY_G0000173;Parent=HG002_chrY_T0000612;transcript_name=HG002_chrY_T0000612;gene_name=RBMY1A3P;ID=intron:HG002_chrY_T0000612:2;Name=RBMY1A3P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8919189	8919298	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG002_chrY_T0000612;gene_id=HG002_chrY_G0000173;Parent=HG002_chrY_T0000612;transcript_name=HG002_chrY_T0000612;gene_name=RBMY1A3P;ID=exon:HG002_chrY_T0000612:3;Name=RBMY1A3P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8919299	8919725	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG002_chrY_T0000612;gene_id=HG002_chrY_G0000173;Parent=HG002_chrY_T0000612;transcript_name=HG002_chrY_T0000612;gene_name=RBMY1A3P;ID=intron:HG002_chrY_T0000612:3;Name=RBMY1A3P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8919726	8919836	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG002_chrY_T0000612;gene_id=HG002_chrY_G0000173;Parent=HG002_chrY_T0000612;transcript_name=HG002_chrY_T0000612;gene_name=RBMY1A3P;ID=exon:HG002_chrY_T0000612:4;Name=RBMY1A3P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8919837	8920791	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG002_chrY_T0000612;gene_id=HG002_chrY_G0000173;Parent=HG002_chrY_T0000612;transcript_name=HG002_chrY_T0000612;gene_name=RBMY1A3P;ID=intron:HG002_chrY_T0000612:4;Name=RBMY1A3P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8920792	8920906	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG002_chrY_T0000612;gene_id=HG002_chrY_G0000173;Parent=HG002_chrY_T0000612;transcript_name=HG002_chrY_T0000612;gene_name=RBMY1A3P;ID=exon:HG002_chrY_T0000612:5;Name=RBMY1A3P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8920907	8922954	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG002_chrY_T0000612;gene_id=HG002_chrY_G0000173;Parent=HG002_chrY_T0000612;transcript_name=HG002_chrY_T0000612;gene_name=RBMY1A3P;ID=intron:HG002_chrY_T0000612:5;Name=RBMY1A3P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8922955	8923107	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG002_chrY_T0000612;gene_id=HG002_chrY_G0000173;Parent=HG002_chrY_T0000612;transcript_name=HG002_chrY_T0000612;gene_name=RBMY1A3P;ID=exon:HG002_chrY_T0000612:6;Name=RBMY1A3P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8923108	8925007	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG002_chrY_T0000612;gene_id=HG002_chrY_G0000173;Parent=HG002_chrY_T0000612;transcript_name=HG002_chrY_T0000612;gene_name=RBMY1A3P;ID=intron:HG002_chrY_T0000612:6;Name=RBMY1A3P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8925008	8925185	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG002_chrY_T0000612;gene_id=HG002_chrY_G0000173;Parent=HG002_chrY_T0000612;transcript_name=HG002_chrY_T0000612;gene_name=RBMY1A3P;ID=exon:HG002_chrY_T0000612:7;Name=RBMY1A3P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8925186	8928200	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG002_chrY_T0000612;gene_id=HG002_chrY_G0000173;Parent=HG002_chrY_T0000612;transcript_name=HG002_chrY_T0000612;gene_name=RBMY1A3P;ID=intron:HG002_chrY_T0000612:7;Name=RBMY1A3P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8928201	8928304	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG002_chrY_T0000612;gene_id=HG002_chrY_G0000173;Parent=HG002_chrY_T0000612;transcript_name=HG002_chrY_T0000612;gene_name=RBMY1A3P;ID=exon:HG002_chrY_T0000612:8;Name=RBMY1A3P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8928305	8928778	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG002_chrY_T0000612;gene_id=HG002_chrY_G0000173;Parent=HG002_chrY_T0000612;transcript_name=HG002_chrY_T0000612;gene_name=RBMY1A3P;ID=intron:HG002_chrY_T0000612:8;Name=RBMY1A3P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8928779	8928887	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG002_chrY_T0000612;gene_id=HG002_chrY_G0000173;Parent=HG002_chrY_T0000612;transcript_name=HG002_chrY_T0000612;gene_name=RBMY1A3P;ID=exon:HG002_chrY_T0000612:9;Name=RBMY1A3P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8931817	8932065	.	+	.	source_gene_common_name=ENSG00000275310;source_gene=ENSG00000275310.1;alternative_source_transcripts=ENST00000610661.1,ENST00000610661.1;gene_id=HG002_chrY_G0000174;gene_biotype=processed_pseudogene;gene_name=ENSG00000275310;gene_sources=liftoff;ID=HG002_chrY_G0000174;Name=ENSG00000275310
HG002_chrY	CAT	transcript	8931817	8932065	1000	+	.	source_transcript=ENST00000610661.1;source_transcript_name=ENST00000610661;source_gene=ENSG00000275310.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000275310.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000610661.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000610661.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275310;alternative_source_transcripts=ENST00000610661.1,ENST00000610661.1;transcript_id=HG002_chrY_T0000616;gene_id=HG002_chrY_G0000174;Parent=HG002_chrY_G0000174;transcript_name=HG002_chrY_T0000616;gene_name=ENSG00000275310;ID=HG002_chrY_T0000616;Name=ENSG00000275310
HG002_chrY	CAT	exon	8931817	8932065	.	+	.	source_transcript=ENST00000610661.1;source_transcript_name=ENST00000610661;source_gene=ENSG00000275310.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000275310.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000610661.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000610661.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275310;alternative_source_transcripts=ENST00000610661.1,ENST00000610661.1;transcript_id=HG002_chrY_T0000616;gene_id=HG002_chrY_G0000174;Parent=HG002_chrY_T0000616;transcript_name=HG002_chrY_T0000616;gene_name=ENSG00000275310;ID=exon:HG002_chrY_T0000616:0;Name=ENSG00000275310;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8935898	8940850	.	-	.	source_gene_common_name=TTTY20;source_gene=ENSG00000232808.1;alternative_source_transcripts=ENST00000434487.1,ENST00000434487.1;gene_id=HG002_chrY_G0000175;gene_biotype=lncRNA;gene_name=TTTY20;gene_sources=liftoff;ID=HG002_chrY_G0000175;Name=TTTY20
HG002_chrY	CAT	transcript	8935898	8940850	1000	-	.	source_transcript=ENST00000434487.1;source_transcript_name=TTTY20-201;source_gene=ENSG00000232808.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232808.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434487.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=ENST00000434487.1,ENST00000434487.1;transcript_id=HG002_chrY_T0000617;gene_id=HG002_chrY_G0000175;Parent=HG002_chrY_G0000175;transcript_name=HG002_chrY_T0000617;gene_name=TTTY20;ID=HG002_chrY_T0000617;Name=TTTY20
HG002_chrY	CAT	exon	8935898	8936074	.	-	.	source_transcript=ENST00000434487.1;source_transcript_name=TTTY20-201;source_gene=ENSG00000232808.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232808.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434487.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=ENST00000434487.1,ENST00000434487.1;transcript_id=HG002_chrY_T0000617;gene_id=HG002_chrY_G0000175;Parent=HG002_chrY_T0000617;transcript_name=HG002_chrY_T0000617;gene_name=TTTY20;ID=exon:HG002_chrY_T0000617:0;Name=TTTY20;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8936075	8940768	.	-	.	source_transcript=ENST00000434487.1;source_transcript_name=TTTY20-201;source_gene=ENSG00000232808.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232808.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434487.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=ENST00000434487.1,ENST00000434487.1;transcript_id=HG002_chrY_T0000617;gene_id=HG002_chrY_G0000175;Parent=HG002_chrY_T0000617;transcript_name=HG002_chrY_T0000617;gene_name=TTTY20;ID=intron:HG002_chrY_T0000617:0;Name=TTTY20;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8940769	8940850	.	-	.	source_transcript=ENST00000434487.1;source_transcript_name=TTTY20-201;source_gene=ENSG00000232808.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232808.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434487.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=ENST00000434487.1,ENST00000434487.1;transcript_id=HG002_chrY_T0000617;gene_id=HG002_chrY_G0000175;Parent=HG002_chrY_T0000617;transcript_name=HG002_chrY_T0000617;gene_name=TTTY20;ID=exon:HG002_chrY_T0000617:1;Name=TTTY20;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8943482	8946278	.	+	.	source_gene_common_name=TSPY8;source_gene=ENSG00000229549.9;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;gene_id=HG002_chrY_G0000176;gene_biotype=protein_coding;gene_name=TSPY8;gene_sources=liftoff;ID=HG002_chrY_G0000176;Name=TSPY8
HG002_chrY	CAT	transcript	8943482	8946278	100	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG002_chrY_T0000618;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_G0000176;transcript_name=HG002_chrY_T0000618;gene_name=TSPY8;ID=HG002_chrY_T0000618;Name=TSPY8
HG002_chrY	CAT	exon	8943482	8944013	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG002_chrY_T0000618;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000618;transcript_name=HG002_chrY_T0000618;gene_name=TSPY8;ID=exon:HG002_chrY_T0000618:0;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8943528	8944013	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG002_chrY_T0000618;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000618;transcript_name=HG002_chrY_T0000618;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000618:0;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	8943528	8943530	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG002_chrY_T0000618;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000618;transcript_name=HG002_chrY_T0000618;gene_name=TSPY8;ID=start_codon:HG002_chrY_T0000618;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8944014	8944620	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG002_chrY_T0000618;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000618;transcript_name=HG002_chrY_T0000618;gene_name=TSPY8;ID=intron:HG002_chrY_T0000618:0;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8944621	8944698	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG002_chrY_T0000618;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000618;transcript_name=HG002_chrY_T0000618;gene_name=TSPY8;ID=exon:HG002_chrY_T0000618:1;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8944621	8944698	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG002_chrY_T0000618;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000618;transcript_name=HG002_chrY_T0000618;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000618:1;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8944699	8944826	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG002_chrY_T0000618;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000618;transcript_name=HG002_chrY_T0000618;gene_name=TSPY8;ID=intron:HG002_chrY_T0000618:1;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8944827	8944938	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG002_chrY_T0000618;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000618;transcript_name=HG002_chrY_T0000618;gene_name=TSPY8;ID=exon:HG002_chrY_T0000618:2;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8944827	8944938	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG002_chrY_T0000618;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000618;transcript_name=HG002_chrY_T0000618;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000618:2;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8944939	8945039	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG002_chrY_T0000618;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000618;transcript_name=HG002_chrY_T0000618;gene_name=TSPY8;ID=intron:HG002_chrY_T0000618:2;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8945040	8945185	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG002_chrY_T0000618;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000618;transcript_name=HG002_chrY_T0000618;gene_name=TSPY8;ID=exon:HG002_chrY_T0000618:3;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8945040	8945185	.	+	2	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG002_chrY_T0000618;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000618;transcript_name=HG002_chrY_T0000618;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000618:3;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8945186	8945291	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG002_chrY_T0000618;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000618;transcript_name=HG002_chrY_T0000618;gene_name=TSPY8;ID=intron:HG002_chrY_T0000618:3;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8945292	8945373	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG002_chrY_T0000618;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000618;transcript_name=HG002_chrY_T0000618;gene_name=TSPY8;ID=exon:HG002_chrY_T0000618:4;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8945292	8945373	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG002_chrY_T0000618;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000618;transcript_name=HG002_chrY_T0000618;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000618:4;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8945374	8946067	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG002_chrY_T0000618;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000618;transcript_name=HG002_chrY_T0000618;gene_name=TSPY8;ID=intron:HG002_chrY_T0000618:4;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8946068	8946278	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG002_chrY_T0000618;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000618;transcript_name=HG002_chrY_T0000618;gene_name=TSPY8;ID=exon:HG002_chrY_T0000618:5;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8946068	8946090	.	+	2	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG002_chrY_T0000618;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000618;transcript_name=HG002_chrY_T0000618;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000618:5;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	8946088	8946090	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG002_chrY_T0000618;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000618;transcript_name=HG002_chrY_T0000618;gene_name=TSPY8;ID=stop_codon:HG002_chrY_T0000618;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8943482	8946277	100	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG002_chrY_T0000619;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_G0000176;transcript_name=HG002_chrY_T0000619;gene_name=TSPY8;ID=HG002_chrY_T0000619;Name=TSPY8
HG002_chrY	CAT	exon	8943482	8943614	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG002_chrY_T0000619;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000619;transcript_name=HG002_chrY_T0000619;gene_name=TSPY8;ID=exon:HG002_chrY_T0000619:0;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8943528	8943614	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG002_chrY_T0000619;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000619;transcript_name=HG002_chrY_T0000619;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000619:0;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	8943528	8943530	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG002_chrY_T0000619;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000619;transcript_name=HG002_chrY_T0000619;gene_name=TSPY8;ID=start_codon:HG002_chrY_T0000619;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8943615	8943875	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG002_chrY_T0000619;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000619;transcript_name=HG002_chrY_T0000619;gene_name=TSPY8;ID=intron:HG002_chrY_T0000619:0;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8943876	8944013	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG002_chrY_T0000619;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000619;transcript_name=HG002_chrY_T0000619;gene_name=TSPY8;ID=exon:HG002_chrY_T0000619:1;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8943876	8944013	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG002_chrY_T0000619;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000619;transcript_name=HG002_chrY_T0000619;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000619:1;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8944014	8944620	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG002_chrY_T0000619;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000619;transcript_name=HG002_chrY_T0000619;gene_name=TSPY8;ID=intron:HG002_chrY_T0000619:1;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8944621	8944698	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG002_chrY_T0000619;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000619;transcript_name=HG002_chrY_T0000619;gene_name=TSPY8;ID=exon:HG002_chrY_T0000619:2;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8944621	8944698	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG002_chrY_T0000619;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000619;transcript_name=HG002_chrY_T0000619;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000619:2;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8944699	8944826	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG002_chrY_T0000619;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000619;transcript_name=HG002_chrY_T0000619;gene_name=TSPY8;ID=intron:HG002_chrY_T0000619:2;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8944827	8944938	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG002_chrY_T0000619;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000619;transcript_name=HG002_chrY_T0000619;gene_name=TSPY8;ID=exon:HG002_chrY_T0000619:3;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8944827	8944938	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG002_chrY_T0000619;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000619;transcript_name=HG002_chrY_T0000619;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000619:3;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8944939	8945039	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG002_chrY_T0000619;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000619;transcript_name=HG002_chrY_T0000619;gene_name=TSPY8;ID=intron:HG002_chrY_T0000619:3;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8945040	8945185	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG002_chrY_T0000619;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000619;transcript_name=HG002_chrY_T0000619;gene_name=TSPY8;ID=exon:HG002_chrY_T0000619:4;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8945040	8945185	.	+	2	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG002_chrY_T0000619;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000619;transcript_name=HG002_chrY_T0000619;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000619:4;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8945186	8945280	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG002_chrY_T0000619;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000619;transcript_name=HG002_chrY_T0000619;gene_name=TSPY8;ID=intron:HG002_chrY_T0000619:4;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8945281	8945373	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG002_chrY_T0000619;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000619;transcript_name=HG002_chrY_T0000619;gene_name=TSPY8;ID=exon:HG002_chrY_T0000619:5;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8945281	8945343	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG002_chrY_T0000619;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000619;transcript_name=HG002_chrY_T0000619;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000619:5;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	8945341	8945343	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG002_chrY_T0000619;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000619;transcript_name=HG002_chrY_T0000619;gene_name=TSPY8;ID=stop_codon:HG002_chrY_T0000619;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8945374	8946067	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG002_chrY_T0000619;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000619;transcript_name=HG002_chrY_T0000619;gene_name=TSPY8;ID=intron:HG002_chrY_T0000619:5;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8946068	8946277	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG002_chrY_T0000619;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000619;transcript_name=HG002_chrY_T0000619;gene_name=TSPY8;ID=exon:HG002_chrY_T0000619:6;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8943528	8946277	100	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG002_chrY_T0000620;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_G0000176;transcript_name=HG002_chrY_T0000620;gene_name=TSPY8;ID=HG002_chrY_T0000620;Name=TSPY8
HG002_chrY	CAT	exon	8943528	8944013	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG002_chrY_T0000620;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000620;transcript_name=HG002_chrY_T0000620;gene_name=TSPY8;ID=exon:HG002_chrY_T0000620:0;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8943528	8944013	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG002_chrY_T0000620;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000620;transcript_name=HG002_chrY_T0000620;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000620:0;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	8943528	8943530	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG002_chrY_T0000620;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000620;transcript_name=HG002_chrY_T0000620;gene_name=TSPY8;ID=start_codon:HG002_chrY_T0000620;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8944014	8944620	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG002_chrY_T0000620;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000620;transcript_name=HG002_chrY_T0000620;gene_name=TSPY8;ID=intron:HG002_chrY_T0000620:0;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8944621	8944698	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG002_chrY_T0000620;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000620;transcript_name=HG002_chrY_T0000620;gene_name=TSPY8;ID=exon:HG002_chrY_T0000620:1;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8944621	8944698	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG002_chrY_T0000620;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000620;transcript_name=HG002_chrY_T0000620;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000620:1;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8944699	8944826	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG002_chrY_T0000620;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000620;transcript_name=HG002_chrY_T0000620;gene_name=TSPY8;ID=intron:HG002_chrY_T0000620:1;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8944827	8944938	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG002_chrY_T0000620;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000620;transcript_name=HG002_chrY_T0000620;gene_name=TSPY8;ID=exon:HG002_chrY_T0000620:2;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8944827	8944938	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG002_chrY_T0000620;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000620;transcript_name=HG002_chrY_T0000620;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000620:2;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8944939	8945039	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG002_chrY_T0000620;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000620;transcript_name=HG002_chrY_T0000620;gene_name=TSPY8;ID=intron:HG002_chrY_T0000620:2;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8945040	8945185	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG002_chrY_T0000620;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000620;transcript_name=HG002_chrY_T0000620;gene_name=TSPY8;ID=exon:HG002_chrY_T0000620:3;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8945040	8945185	.	+	2	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG002_chrY_T0000620;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000620;transcript_name=HG002_chrY_T0000620;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000620:3;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8945186	8945280	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG002_chrY_T0000620;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000620;transcript_name=HG002_chrY_T0000620;gene_name=TSPY8;ID=intron:HG002_chrY_T0000620:3;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8945281	8945373	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG002_chrY_T0000620;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000620;transcript_name=HG002_chrY_T0000620;gene_name=TSPY8;ID=exon:HG002_chrY_T0000620:4;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8945281	8945343	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG002_chrY_T0000620;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000620;transcript_name=HG002_chrY_T0000620;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000620:4;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	8945341	8945343	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG002_chrY_T0000620;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000620;transcript_name=HG002_chrY_T0000620;gene_name=TSPY8;ID=stop_codon:HG002_chrY_T0000620;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8945374	8946067	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG002_chrY_T0000620;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000620;transcript_name=HG002_chrY_T0000620;gene_name=TSPY8;ID=intron:HG002_chrY_T0000620:4;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8946068	8946277	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG002_chrY_T0000620;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000620;transcript_name=HG002_chrY_T0000620;gene_name=TSPY8;ID=exon:HG002_chrY_T0000620:5;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8943528	8946284	1000	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;transcript_id=HG002_chrY_T0000621;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_G0000176;transcript_name=HG002_chrY_T0000621;gene_name=TSPY8;ID=HG002_chrY_T0000621;Name=TSPY8
HG002_chrY	CAT	exon	8943528	8944013	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;transcript_id=HG002_chrY_T0000621;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000621;transcript_name=HG002_chrY_T0000621;gene_name=TSPY8;ID=exon:HG002_chrY_T0000621:0;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8944014	8944620	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;transcript_id=HG002_chrY_T0000621;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000621;transcript_name=HG002_chrY_T0000621;gene_name=TSPY8;ID=intron:HG002_chrY_T0000621:0;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8944621	8944698	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;transcript_id=HG002_chrY_T0000621;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000621;transcript_name=HG002_chrY_T0000621;gene_name=TSPY8;ID=exon:HG002_chrY_T0000621:1;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8944699	8944826	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;transcript_id=HG002_chrY_T0000621;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000621;transcript_name=HG002_chrY_T0000621;gene_name=TSPY8;ID=intron:HG002_chrY_T0000621:1;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8944827	8945373	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;transcript_id=HG002_chrY_T0000621;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000621;transcript_name=HG002_chrY_T0000621;gene_name=TSPY8;ID=exon:HG002_chrY_T0000621:2;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8945374	8945500	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;transcript_id=HG002_chrY_T0000621;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000621;transcript_name=HG002_chrY_T0000621;gene_name=TSPY8;ID=intron:HG002_chrY_T0000621:2;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8945501	8946284	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;transcript_id=HG002_chrY_T0000621;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000621;transcript_name=HG002_chrY_T0000621;gene_name=TSPY8;ID=exon:HG002_chrY_T0000621:3;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8944888	8946269	1000	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG002_chrY_T0000622;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_G0000176;transcript_name=HG002_chrY_T0000622;gene_name=TSPY8;ID=HG002_chrY_T0000622;Name=TSPY8
HG002_chrY	CAT	exon	8944888	8945185	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG002_chrY_T0000622;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000622;transcript_name=HG002_chrY_T0000622;gene_name=TSPY8;ID=exon:HG002_chrY_T0000622:0;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8945186	8945291	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG002_chrY_T0000622;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000622;transcript_name=HG002_chrY_T0000622;gene_name=TSPY8;ID=intron:HG002_chrY_T0000622:0;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8945292	8945373	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG002_chrY_T0000622;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000622;transcript_name=HG002_chrY_T0000622;gene_name=TSPY8;ID=exon:HG002_chrY_T0000622:1;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8945374	8946067	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG002_chrY_T0000622;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000622;transcript_name=HG002_chrY_T0000622;gene_name=TSPY8;ID=intron:HG002_chrY_T0000622:1;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8946068	8946269	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG002_chrY_T0000622;gene_id=HG002_chrY_G0000176;Parent=HG002_chrY_T0000622;transcript_name=HG002_chrY_T0000622;gene_name=TSPY8;ID=exon:HG002_chrY_T0000622:2;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8953479	8961183	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1_7;gene_id=HG002_chrY_G0000177;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG002_chrY_G0000177;Name=FAM197Y9
HG002_chrY	CAT	transcript	8953479	8961183	1000	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000623;gene_id=HG002_chrY_G0000177;Parent=HG002_chrY_G0000177;transcript_name=HG002_chrY_T0000623;gene_name=FAM197Y9;ID=HG002_chrY_T0000623;Name=FAM197Y9
HG002_chrY	CAT	exon	8953479	8955606	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000623;gene_id=HG002_chrY_G0000177;Parent=HG002_chrY_T0000623;transcript_name=HG002_chrY_T0000623;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000623:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8955607	8959156	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000623;gene_id=HG002_chrY_G0000177;Parent=HG002_chrY_T0000623;transcript_name=HG002_chrY_T0000623;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000623:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8959157	8959242	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000623;gene_id=HG002_chrY_G0000177;Parent=HG002_chrY_T0000623;transcript_name=HG002_chrY_T0000623;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000623:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8959243	8961063	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000623;gene_id=HG002_chrY_G0000177;Parent=HG002_chrY_T0000623;transcript_name=HG002_chrY_T0000623;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000623:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8961064	8961183	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000623;gene_id=HG002_chrY_G0000177;Parent=HG002_chrY_T0000623;transcript_name=HG002_chrY_T0000623;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000623:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8955547	8961165	1000	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000624;gene_id=HG002_chrY_G0000177;Parent=HG002_chrY_G0000177;transcript_name=HG002_chrY_T0000624;gene_name=FAM197Y9;ID=HG002_chrY_T0000624;Name=FAM197Y9
HG002_chrY	CAT	exon	8955547	8955606	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000624;gene_id=HG002_chrY_G0000177;Parent=HG002_chrY_T0000624;transcript_name=HG002_chrY_T0000624;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000624:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8955607	8959156	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000624;gene_id=HG002_chrY_G0000177;Parent=HG002_chrY_T0000624;transcript_name=HG002_chrY_T0000624;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000624:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8959157	8959315	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000624;gene_id=HG002_chrY_G0000177;Parent=HG002_chrY_T0000624;transcript_name=HG002_chrY_T0000624;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000624:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8959316	8960831	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000624;gene_id=HG002_chrY_G0000177;Parent=HG002_chrY_T0000624;transcript_name=HG002_chrY_T0000624;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000624:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8960832	8960977	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000624;gene_id=HG002_chrY_G0000177;Parent=HG002_chrY_T0000624;transcript_name=HG002_chrY_T0000624;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000624:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8960978	8961063	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000624;gene_id=HG002_chrY_G0000177;Parent=HG002_chrY_T0000624;transcript_name=HG002_chrY_T0000624;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000624:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8961064	8961165	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000624;gene_id=HG002_chrY_G0000177;Parent=HG002_chrY_T0000624;transcript_name=HG002_chrY_T0000624;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000624:3;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8960832	8962825	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9_1;gene_id=HG002_chrY_G0000178;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG002_chrY_G0000178;Name=FAM197Y9
HG002_chrY	CAT	transcript	8960832	8962825	1000	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000625;gene_id=HG002_chrY_G0000178;Parent=HG002_chrY_G0000178;transcript_name=HG002_chrY_T0000625;gene_name=FAM197Y9;ID=HG002_chrY_T0000625;Name=FAM197Y9
HG002_chrY	CAT	exon	8960832	8960977	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000625;gene_id=HG002_chrY_G0000178;Parent=HG002_chrY_T0000625;transcript_name=HG002_chrY_T0000625;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000625:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8960978	8961089	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000625;gene_id=HG002_chrY_G0000178;Parent=HG002_chrY_T0000625;transcript_name=HG002_chrY_T0000625;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000625:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8961090	8961173	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000625;gene_id=HG002_chrY_G0000178;Parent=HG002_chrY_T0000625;transcript_name=HG002_chrY_T0000625;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000625:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8961174	8962515	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000625;gene_id=HG002_chrY_G0000178;Parent=HG002_chrY_T0000625;transcript_name=HG002_chrY_T0000625;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000625:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8962516	8962825	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000625;gene_id=HG002_chrY_G0000178;Parent=HG002_chrY_T0000625;transcript_name=HG002_chrY_T0000625;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000625:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8963778	8966574	.	+	.	source_gene_common_name=TSPY8;source_gene=ENSG00000229549.9;alternative_source_transcripts=ENST00000287721.13;gene_id=HG002_chrY_G0000179;gene_biotype=protein_coding;gene_name=TSPY8;gene_sources=liftoff;ID=HG002_chrY_G0000179;Name=TSPY8
HG002_chrY	CAT	transcript	8963778	8966574	100	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000626;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_G0000179;transcript_name=HG002_chrY_T0000626;gene_name=TSPY8;ID=HG002_chrY_T0000626;Name=TSPY8
HG002_chrY	CAT	exon	8963778	8964309	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000626;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000626;transcript_name=HG002_chrY_T0000626;gene_name=TSPY8;ID=exon:HG002_chrY_T0000626:0;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8963824	8964309	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000626;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000626;transcript_name=HG002_chrY_T0000626;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000626:0;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	8963824	8963826	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000626;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000626;transcript_name=HG002_chrY_T0000626;gene_name=TSPY8;ID=start_codon:HG002_chrY_T0000626;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8964310	8964916	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000626;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000626;transcript_name=HG002_chrY_T0000626;gene_name=TSPY8;ID=intron:HG002_chrY_T0000626:0;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8964917	8964994	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000626;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000626;transcript_name=HG002_chrY_T0000626;gene_name=TSPY8;ID=exon:HG002_chrY_T0000626:1;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8964917	8964994	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000626;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000626;transcript_name=HG002_chrY_T0000626;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000626:1;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8964995	8965122	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000626;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000626;transcript_name=HG002_chrY_T0000626;gene_name=TSPY8;ID=intron:HG002_chrY_T0000626:1;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8965123	8965234	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000626;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000626;transcript_name=HG002_chrY_T0000626;gene_name=TSPY8;ID=exon:HG002_chrY_T0000626:2;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8965123	8965234	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000626;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000626;transcript_name=HG002_chrY_T0000626;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000626:2;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8965235	8965335	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000626;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000626;transcript_name=HG002_chrY_T0000626;gene_name=TSPY8;ID=intron:HG002_chrY_T0000626:2;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8965336	8965481	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000626;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000626;transcript_name=HG002_chrY_T0000626;gene_name=TSPY8;ID=exon:HG002_chrY_T0000626:3;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8965336	8965481	.	+	2	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000626;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000626;transcript_name=HG002_chrY_T0000626;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000626:3;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8965482	8965587	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000626;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000626;transcript_name=HG002_chrY_T0000626;gene_name=TSPY8;ID=intron:HG002_chrY_T0000626:3;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8965588	8965669	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000626;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000626;transcript_name=HG002_chrY_T0000626;gene_name=TSPY8;ID=exon:HG002_chrY_T0000626:4;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8965588	8965669	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000626;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000626;transcript_name=HG002_chrY_T0000626;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000626:4;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8965670	8966363	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000626;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000626;transcript_name=HG002_chrY_T0000626;gene_name=TSPY8;ID=intron:HG002_chrY_T0000626:4;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8966364	8966574	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000626;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000626;transcript_name=HG002_chrY_T0000626;gene_name=TSPY8;ID=exon:HG002_chrY_T0000626:5;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8966364	8966386	.	+	2	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000626;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000626;transcript_name=HG002_chrY_T0000626;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000626:5;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	8966384	8966386	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000626;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000626;transcript_name=HG002_chrY_T0000626;gene_name=TSPY8;ID=stop_codon:HG002_chrY_T0000626;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8963778	8966573	100	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG002_chrY_T0000627;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_G0000179;transcript_name=HG002_chrY_T0000627;gene_name=TSPY8;ID=HG002_chrY_T0000627;Name=TSPY8
HG002_chrY	CAT	exon	8963778	8963910	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG002_chrY_T0000627;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000627;transcript_name=HG002_chrY_T0000627;gene_name=TSPY8;ID=exon:HG002_chrY_T0000627:0;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8963824	8963910	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG002_chrY_T0000627;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000627;transcript_name=HG002_chrY_T0000627;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000627:0;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	8963824	8963826	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG002_chrY_T0000627;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000627;transcript_name=HG002_chrY_T0000627;gene_name=TSPY8;ID=start_codon:HG002_chrY_T0000627;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8963911	8964171	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG002_chrY_T0000627;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000627;transcript_name=HG002_chrY_T0000627;gene_name=TSPY8;ID=intron:HG002_chrY_T0000627:0;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8964172	8964309	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG002_chrY_T0000627;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000627;transcript_name=HG002_chrY_T0000627;gene_name=TSPY8;ID=exon:HG002_chrY_T0000627:1;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8964172	8964309	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG002_chrY_T0000627;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000627;transcript_name=HG002_chrY_T0000627;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000627:1;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8964310	8964916	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG002_chrY_T0000627;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000627;transcript_name=HG002_chrY_T0000627;gene_name=TSPY8;ID=intron:HG002_chrY_T0000627:1;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8964917	8964994	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG002_chrY_T0000627;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000627;transcript_name=HG002_chrY_T0000627;gene_name=TSPY8;ID=exon:HG002_chrY_T0000627:2;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8964917	8964994	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG002_chrY_T0000627;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000627;transcript_name=HG002_chrY_T0000627;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000627:2;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8964995	8965122	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG002_chrY_T0000627;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000627;transcript_name=HG002_chrY_T0000627;gene_name=TSPY8;ID=intron:HG002_chrY_T0000627:2;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8965123	8965234	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG002_chrY_T0000627;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000627;transcript_name=HG002_chrY_T0000627;gene_name=TSPY8;ID=exon:HG002_chrY_T0000627:3;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8965123	8965234	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG002_chrY_T0000627;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000627;transcript_name=HG002_chrY_T0000627;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000627:3;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8965235	8965335	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG002_chrY_T0000627;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000627;transcript_name=HG002_chrY_T0000627;gene_name=TSPY8;ID=intron:HG002_chrY_T0000627:3;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8965336	8965481	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG002_chrY_T0000627;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000627;transcript_name=HG002_chrY_T0000627;gene_name=TSPY8;ID=exon:HG002_chrY_T0000627:4;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8965336	8965481	.	+	2	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG002_chrY_T0000627;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000627;transcript_name=HG002_chrY_T0000627;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000627:4;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8965482	8965576	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG002_chrY_T0000627;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000627;transcript_name=HG002_chrY_T0000627;gene_name=TSPY8;ID=intron:HG002_chrY_T0000627:4;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8965577	8965669	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG002_chrY_T0000627;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000627;transcript_name=HG002_chrY_T0000627;gene_name=TSPY8;ID=exon:HG002_chrY_T0000627:5;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8965577	8965639	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG002_chrY_T0000627;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000627;transcript_name=HG002_chrY_T0000627;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000627:5;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	8965637	8965639	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG002_chrY_T0000627;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000627;transcript_name=HG002_chrY_T0000627;gene_name=TSPY8;ID=stop_codon:HG002_chrY_T0000627;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8965670	8966363	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG002_chrY_T0000627;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000627;transcript_name=HG002_chrY_T0000627;gene_name=TSPY8;ID=intron:HG002_chrY_T0000627:5;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8966364	8966573	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG002_chrY_T0000627;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000627;transcript_name=HG002_chrY_T0000627;gene_name=TSPY8;ID=exon:HG002_chrY_T0000627:6;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8963824	8966573	100	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000628;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_G0000179;transcript_name=HG002_chrY_T0000628;gene_name=TSPY8;ID=HG002_chrY_T0000628;Name=TSPY8
HG002_chrY	CAT	exon	8963824	8964309	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000628;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000628;transcript_name=HG002_chrY_T0000628;gene_name=TSPY8;ID=exon:HG002_chrY_T0000628:0;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8963824	8964309	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000628;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000628;transcript_name=HG002_chrY_T0000628;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000628:0;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	8963824	8963826	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000628;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000628;transcript_name=HG002_chrY_T0000628;gene_name=TSPY8;ID=start_codon:HG002_chrY_T0000628;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8964310	8964916	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000628;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000628;transcript_name=HG002_chrY_T0000628;gene_name=TSPY8;ID=intron:HG002_chrY_T0000628:0;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8964917	8964994	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000628;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000628;transcript_name=HG002_chrY_T0000628;gene_name=TSPY8;ID=exon:HG002_chrY_T0000628:1;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8964917	8964994	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000628;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000628;transcript_name=HG002_chrY_T0000628;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000628:1;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8964995	8965122	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000628;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000628;transcript_name=HG002_chrY_T0000628;gene_name=TSPY8;ID=intron:HG002_chrY_T0000628:1;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8965123	8965234	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000628;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000628;transcript_name=HG002_chrY_T0000628;gene_name=TSPY8;ID=exon:HG002_chrY_T0000628:2;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8965123	8965234	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000628;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000628;transcript_name=HG002_chrY_T0000628;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000628:2;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8965235	8965335	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000628;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000628;transcript_name=HG002_chrY_T0000628;gene_name=TSPY8;ID=intron:HG002_chrY_T0000628:2;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8965336	8965481	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000628;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000628;transcript_name=HG002_chrY_T0000628;gene_name=TSPY8;ID=exon:HG002_chrY_T0000628:3;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8965336	8965481	.	+	2	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000628;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000628;transcript_name=HG002_chrY_T0000628;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000628:3;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8965482	8965576	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000628;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000628;transcript_name=HG002_chrY_T0000628;gene_name=TSPY8;ID=intron:HG002_chrY_T0000628:3;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8965577	8965669	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000628;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000628;transcript_name=HG002_chrY_T0000628;gene_name=TSPY8;ID=exon:HG002_chrY_T0000628:4;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	8965577	8965639	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000628;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000628;transcript_name=HG002_chrY_T0000628;gene_name=TSPY8;ID=CDS:HG002_chrY_T0000628:4;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	8965637	8965639	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000628;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000628;transcript_name=HG002_chrY_T0000628;gene_name=TSPY8;ID=stop_codon:HG002_chrY_T0000628;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8965670	8966363	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000628;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000628;transcript_name=HG002_chrY_T0000628;gene_name=TSPY8;ID=intron:HG002_chrY_T0000628:4;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8966364	8966573	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000628;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000628;transcript_name=HG002_chrY_T0000628;gene_name=TSPY8;ID=exon:HG002_chrY_T0000628:5;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8963824	8966580	1000	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG002_chrY_T0000629;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_G0000179;transcript_name=HG002_chrY_T0000629;gene_name=TSPY8;ID=HG002_chrY_T0000629;Name=TSPY8
HG002_chrY	CAT	exon	8963824	8964309	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG002_chrY_T0000629;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000629;transcript_name=HG002_chrY_T0000629;gene_name=TSPY8;ID=exon:HG002_chrY_T0000629:0;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8964310	8964916	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG002_chrY_T0000629;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000629;transcript_name=HG002_chrY_T0000629;gene_name=TSPY8;ID=intron:HG002_chrY_T0000629:0;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8964917	8964994	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG002_chrY_T0000629;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000629;transcript_name=HG002_chrY_T0000629;gene_name=TSPY8;ID=exon:HG002_chrY_T0000629:1;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8964995	8965122	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG002_chrY_T0000629;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000629;transcript_name=HG002_chrY_T0000629;gene_name=TSPY8;ID=intron:HG002_chrY_T0000629:1;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8965123	8965669	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG002_chrY_T0000629;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000629;transcript_name=HG002_chrY_T0000629;gene_name=TSPY8;ID=exon:HG002_chrY_T0000629:2;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8965670	8965796	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG002_chrY_T0000629;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000629;transcript_name=HG002_chrY_T0000629;gene_name=TSPY8;ID=intron:HG002_chrY_T0000629:2;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8965797	8966580	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG002_chrY_T0000629;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000629;transcript_name=HG002_chrY_T0000629;gene_name=TSPY8;ID=exon:HG002_chrY_T0000629:3;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8965184	8966565	1000	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=299.828;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000436159.2;transcript_id=HG002_chrY_T0000630;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_G0000179;transcript_name=HG002_chrY_T0000630;gene_name=TSPY8;ID=HG002_chrY_T0000630;Name=TSPY8
HG002_chrY	CAT	exon	8965184	8965481	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000436159.2;transcript_id=HG002_chrY_T0000630;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000630;transcript_name=HG002_chrY_T0000630;gene_name=TSPY8;ID=exon:HG002_chrY_T0000630:0;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8965482	8965587	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000436159.2;transcript_id=HG002_chrY_T0000630;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000630;transcript_name=HG002_chrY_T0000630;gene_name=TSPY8;ID=intron:HG002_chrY_T0000630:0;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8965588	8965669	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000436159.2;transcript_id=HG002_chrY_T0000630;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000630;transcript_name=HG002_chrY_T0000630;gene_name=TSPY8;ID=exon:HG002_chrY_T0000630:1;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8965670	8966363	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000436159.2;transcript_id=HG002_chrY_T0000630;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000630;transcript_name=HG002_chrY_T0000630;gene_name=TSPY8;ID=intron:HG002_chrY_T0000630:1;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8966364	8966565	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000436159.2;transcript_id=HG002_chrY_T0000630;gene_id=HG002_chrY_G0000179;Parent=HG002_chrY_T0000630;transcript_name=HG002_chrY_T0000630;gene_name=TSPY8;ID=exon:HG002_chrY_T0000630:2;Name=TSPY8;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8973824	8981722	.	-	.	source_gene_common_name=FAM197Y8;source_gene=ENSG00000293362.1_2;gene_id=HG002_chrY_G0000180;gene_biotype=lncRNA;gene_name=FAM197Y8;gene_sources=liftoff;ID=HG002_chrY_G0000180;Name=FAM197Y8
HG002_chrY	CAT	transcript	8973824	8981722	1000	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000631;gene_id=HG002_chrY_G0000180;Parent=HG002_chrY_G0000180;transcript_name=HG002_chrY_T0000631;gene_name=FAM197Y8;ID=HG002_chrY_T0000631;Name=FAM197Y8
HG002_chrY	CAT	exon	8973824	8975951	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000631;gene_id=HG002_chrY_G0000180;Parent=HG002_chrY_T0000631;transcript_name=HG002_chrY_T0000631;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000631:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8975952	8979502	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000631;gene_id=HG002_chrY_G0000180;Parent=HG002_chrY_T0000631;transcript_name=HG002_chrY_T0000631;gene_name=FAM197Y8;ID=intron:HG002_chrY_T0000631:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8979503	8979588	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000631;gene_id=HG002_chrY_G0000180;Parent=HG002_chrY_T0000631;transcript_name=HG002_chrY_T0000631;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000631:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8979589	8981401	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000631;gene_id=HG002_chrY_G0000180;Parent=HG002_chrY_T0000631;transcript_name=HG002_chrY_T0000631;gene_name=FAM197Y8;ID=intron:HG002_chrY_T0000631:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8981402	8981511	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000631;gene_id=HG002_chrY_G0000180;Parent=HG002_chrY_T0000631;transcript_name=HG002_chrY_T0000631;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000631:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8981512	8981707	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000631;gene_id=HG002_chrY_G0000180;Parent=HG002_chrY_T0000631;transcript_name=HG002_chrY_T0000631;gene_name=FAM197Y8;ID=intron:HG002_chrY_T0000631:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8981708	8981722	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000631;gene_id=HG002_chrY_G0000180;Parent=HG002_chrY_T0000631;transcript_name=HG002_chrY_T0000631;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000631:3;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8975891	8981503	1000	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000632;gene_id=HG002_chrY_G0000180;Parent=HG002_chrY_G0000180;transcript_name=HG002_chrY_T0000632;gene_name=FAM197Y8;ID=HG002_chrY_T0000632;Name=FAM197Y8
HG002_chrY	CAT	exon	8975891	8975951	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000632;gene_id=HG002_chrY_G0000180;Parent=HG002_chrY_T0000632;transcript_name=HG002_chrY_T0000632;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000632:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8975952	8979502	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000632;gene_id=HG002_chrY_G0000180;Parent=HG002_chrY_T0000632;transcript_name=HG002_chrY_T0000632;gene_name=FAM197Y8;ID=intron:HG002_chrY_T0000632:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8979503	8979661	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000632;gene_id=HG002_chrY_G0000180;Parent=HG002_chrY_T0000632;transcript_name=HG002_chrY_T0000632;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000632:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8979662	8981169	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000632;gene_id=HG002_chrY_G0000180;Parent=HG002_chrY_T0000632;transcript_name=HG002_chrY_T0000632;gene_name=FAM197Y8;ID=intron:HG002_chrY_T0000632:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8981170	8981315	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000632;gene_id=HG002_chrY_G0000180;Parent=HG002_chrY_T0000632;transcript_name=HG002_chrY_T0000632;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000632:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8981316	8981401	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000632;gene_id=HG002_chrY_G0000180;Parent=HG002_chrY_T0000632;transcript_name=HG002_chrY_T0000632;gene_name=FAM197Y8;ID=intron:HG002_chrY_T0000632:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8981402	8981503	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000632;gene_id=HG002_chrY_G0000180;Parent=HG002_chrY_T0000632;transcript_name=HG002_chrY_T0000632;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000632:3;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8981167	8983134	.	-	.	source_gene_common_name=FAM197Y8;source_gene=ENSG00000225560.7;gene_id=HG002_chrY_G0000181;gene_biotype=transcribed_processed_pseudogene;gene_name=FAM197Y8;gene_sources=liftoff;ID=HG002_chrY_G0000181;Name=FAM197Y8
HG002_chrY	CAT	transcript	8981167	8983134	1000	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000633;gene_id=HG002_chrY_G0000181;Parent=HG002_chrY_G0000181;transcript_name=HG002_chrY_T0000633;gene_name=FAM197Y8;ID=HG002_chrY_T0000633;Name=FAM197Y8
HG002_chrY	CAT	exon	8981167	8981315	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000633;gene_id=HG002_chrY_G0000181;Parent=HG002_chrY_T0000633;transcript_name=HG002_chrY_T0000633;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000633:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8981316	8981401	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000633;gene_id=HG002_chrY_G0000181;Parent=HG002_chrY_T0000633;transcript_name=HG002_chrY_T0000633;gene_name=FAM197Y8;ID=intron:HG002_chrY_T0000633:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8981402	8981511	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000633;gene_id=HG002_chrY_G0000181;Parent=HG002_chrY_T0000633;transcript_name=HG002_chrY_T0000633;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000633:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8981512	8982833	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000633;gene_id=HG002_chrY_G0000181;Parent=HG002_chrY_T0000633;transcript_name=HG002_chrY_T0000633;gene_name=FAM197Y8;ID=intron:HG002_chrY_T0000633:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8982834	8983134	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000633;gene_id=HG002_chrY_G0000181;Parent=HG002_chrY_T0000633;transcript_name=HG002_chrY_T0000633;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000633:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8984157	8986925	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1_4;gene_id=HG002_chrY_G0000182;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=HG002_chrY_G0000182;Name=ENSG00000293749
HG002_chrY	CAT	transcript	8984157	8986925	1000	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000634;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_G0000182;transcript_name=HG002_chrY_T0000634;gene_name=ENSG00000293749;ID=HG002_chrY_T0000634;Name=ENSG00000293749
HG002_chrY	CAT	exon	8984157	8984249	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000634;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000634;transcript_name=HG002_chrY_T0000634;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000634:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8984250	8984510	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000634;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000634;transcript_name=HG002_chrY_T0000634;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000634:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8984511	8984648	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000634;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000634;transcript_name=HG002_chrY_T0000634;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000634:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8984649	8985255	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000634;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000634;transcript_name=HG002_chrY_T0000634;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000634:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8985256	8985333	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000634;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000634;transcript_name=HG002_chrY_T0000634;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000634:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8985334	8985461	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000634;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000634;transcript_name=HG002_chrY_T0000634;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000634:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8985462	8985573	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000634;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000634;transcript_name=HG002_chrY_T0000634;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000634:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8985574	8985674	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000634;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000634;transcript_name=HG002_chrY_T0000634;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000634:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8985675	8985820	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000634;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000634;transcript_name=HG002_chrY_T0000634;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000634:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8985821	8985926	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000634;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000634;transcript_name=HG002_chrY_T0000634;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000634:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8985927	8986008	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000634;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000634;transcript_name=HG002_chrY_T0000634;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000634:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8986009	8986702	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000634;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000634;transcript_name=HG002_chrY_T0000634;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000634:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8986703	8986925	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000634;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000634;transcript_name=HG002_chrY_T0000634;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000634:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8984169	8986913	1000	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000636;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_G0000182;transcript_name=HG002_chrY_T0000636;gene_name=ENSG00000293749;ID=HG002_chrY_T0000636;Name=ENSG00000293749
HG002_chrY	CAT	exon	8984169	8984249	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000636;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000636;transcript_name=HG002_chrY_T0000636;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000636:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8984250	8984510	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000636;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000636;transcript_name=HG002_chrY_T0000636;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000636:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8984511	8984648	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000636;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000636;transcript_name=HG002_chrY_T0000636;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000636:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8984649	8985255	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000636;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000636;transcript_name=HG002_chrY_T0000636;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000636:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8985256	8985333	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000636;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000636;transcript_name=HG002_chrY_T0000636;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000636:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8985334	8985461	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000636;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000636;transcript_name=HG002_chrY_T0000636;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000636:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8985462	8985573	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000636;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000636;transcript_name=HG002_chrY_T0000636;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000636:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8985574	8985681	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000636;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000636;transcript_name=HG002_chrY_T0000636;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000636:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8985682	8985820	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000636;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000636;transcript_name=HG002_chrY_T0000636;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000636:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8985821	8985926	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000636;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000636;transcript_name=HG002_chrY_T0000636;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000636:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8985927	8986008	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000636;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000636;transcript_name=HG002_chrY_T0000636;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000636:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8986009	8986702	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000636;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000636;transcript_name=HG002_chrY_T0000636;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000636:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8986703	8986913	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000636;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000636;transcript_name=HG002_chrY_T0000636;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000636:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8984178	8986920	1000	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000637;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_G0000182;transcript_name=HG002_chrY_T0000637;gene_name=ENSG00000293749;ID=HG002_chrY_T0000637;Name=ENSG00000293749
HG002_chrY	CAT	exon	8984178	8984249	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000637;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000637;transcript_name=HG002_chrY_T0000637;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000637:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8984250	8984510	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000637;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000637;transcript_name=HG002_chrY_T0000637;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000637:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8984511	8984648	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000637;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000637;transcript_name=HG002_chrY_T0000637;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000637:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8984649	8985255	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000637;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000637;transcript_name=HG002_chrY_T0000637;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000637:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8985256	8985333	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000637;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000637;transcript_name=HG002_chrY_T0000637;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000637:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8985334	8985461	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000637;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000637;transcript_name=HG002_chrY_T0000637;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000637:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8985462	8985573	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000637;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000637;transcript_name=HG002_chrY_T0000637;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000637:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8985574	8985674	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000637;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000637;transcript_name=HG002_chrY_T0000637;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000637:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8985675	8985820	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000637;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000637;transcript_name=HG002_chrY_T0000637;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000637:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8985821	8985915	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000637;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000637;transcript_name=HG002_chrY_T0000637;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000637:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8985916	8986008	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000637;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000637;transcript_name=HG002_chrY_T0000637;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000637:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8986009	8986702	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000637;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000637;transcript_name=HG002_chrY_T0000637;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000637:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8986703	8986920	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000637;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000637;transcript_name=HG002_chrY_T0000637;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000637:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8984380	8986918	1000	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000638;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_G0000182;transcript_name=HG002_chrY_T0000638;gene_name=ENSG00000293749;ID=HG002_chrY_T0000638;Name=ENSG00000293749
HG002_chrY	CAT	exon	8984380	8984648	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000638;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000638;transcript_name=HG002_chrY_T0000638;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000638:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8984649	8985255	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000638;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000638;transcript_name=HG002_chrY_T0000638;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000638:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8985256	8985333	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000638;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000638;transcript_name=HG002_chrY_T0000638;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000638:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8985334	8985461	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000638;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000638;transcript_name=HG002_chrY_T0000638;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000638:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8985462	8985573	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000638;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000638;transcript_name=HG002_chrY_T0000638;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000638:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8985574	8985674	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000638;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000638;transcript_name=HG002_chrY_T0000638;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000638:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8985675	8985820	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000638;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000638;transcript_name=HG002_chrY_T0000638;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000638:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8985821	8985926	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000638;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000638;transcript_name=HG002_chrY_T0000638;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000638:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8985927	8986008	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000638;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000638;transcript_name=HG002_chrY_T0000638;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000638:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8986009	8986702	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000638;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000638;transcript_name=HG002_chrY_T0000638;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000638:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8986703	8986918	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000638;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000638;transcript_name=HG002_chrY_T0000638;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000638:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8984476	8986913	1000	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000639;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_G0000182;transcript_name=HG002_chrY_T0000639;gene_name=ENSG00000293749;ID=HG002_chrY_T0000639;Name=ENSG00000293749
HG002_chrY	CAT	exon	8984476	8984648	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000639;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000639;transcript_name=HG002_chrY_T0000639;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000639:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8984649	8985255	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000639;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000639;transcript_name=HG002_chrY_T0000639;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000639:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8985256	8985333	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000639;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000639;transcript_name=HG002_chrY_T0000639;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000639:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8985334	8985461	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000639;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000639;transcript_name=HG002_chrY_T0000639;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000639:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8985462	8985573	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000639;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000639;transcript_name=HG002_chrY_T0000639;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000639:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8985574	8985681	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000639;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000639;transcript_name=HG002_chrY_T0000639;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000639:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8985682	8985820	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000639;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000639;transcript_name=HG002_chrY_T0000639;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000639:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8985821	8985926	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000639;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000639;transcript_name=HG002_chrY_T0000639;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000639:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8985927	8986008	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000639;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000639;transcript_name=HG002_chrY_T0000639;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000639:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8986009	8986702	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000639;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000639;transcript_name=HG002_chrY_T0000639;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000639:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8986703	8986913	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000639;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000639;transcript_name=HG002_chrY_T0000639;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000639:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8984602	8986924	1000	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000640;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_G0000182;transcript_name=HG002_chrY_T0000640;gene_name=ENSG00000293749;ID=HG002_chrY_T0000640;Name=ENSG00000293749
HG002_chrY	CAT	exon	8984602	8984704	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000640;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000640;transcript_name=HG002_chrY_T0000640;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000640:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8984705	8985273	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000640;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000640;transcript_name=HG002_chrY_T0000640;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000640:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8985274	8985333	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000640;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000640;transcript_name=HG002_chrY_T0000640;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000640:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8985334	8985461	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000640;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000640;transcript_name=HG002_chrY_T0000640;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000640:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8985462	8985573	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000640;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000640;transcript_name=HG002_chrY_T0000640;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000640:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8985574	8985674	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000640;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000640;transcript_name=HG002_chrY_T0000640;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000640:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8985675	8985820	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000640;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000640;transcript_name=HG002_chrY_T0000640;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000640:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8985821	8985926	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000640;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000640;transcript_name=HG002_chrY_T0000640;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000640:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8985927	8986008	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000640;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000640;transcript_name=HG002_chrY_T0000640;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000640:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8986009	8986702	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000640;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000640;transcript_name=HG002_chrY_T0000640;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000640:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8986703	8986924	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000640;gene_id=HG002_chrY_G0000182;Parent=HG002_chrY_T0000640;transcript_name=HG002_chrY_T0000640;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000640:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8984163	8986725	.	+	.	source_gene_common_name=TSPY6P;source_gene=ENSG00000270073.1_4;gene_id=HG002_chrY_G0000183;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY6P;gene_sources=liftoff;ID=HG002_chrY_G0000183;Name=TSPY6P
HG002_chrY	CAT	transcript	8984163	8986725	1000	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000635;gene_id=HG002_chrY_G0000183;Parent=HG002_chrY_G0000183;transcript_name=HG002_chrY_T0000635;gene_name=TSPY6P;ID=HG002_chrY_T0000635;Name=TSPY6P
HG002_chrY	CAT	exon	8984163	8984373	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000635;gene_id=HG002_chrY_G0000183;Parent=HG002_chrY_T0000635;transcript_name=HG002_chrY_T0000635;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000635:0;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8984374	8984381	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000635;gene_id=HG002_chrY_G0000183;Parent=HG002_chrY_T0000635;transcript_name=HG002_chrY_T0000635;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000635:0;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8984382	8984648	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000635;gene_id=HG002_chrY_G0000183;Parent=HG002_chrY_T0000635;transcript_name=HG002_chrY_T0000635;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000635:1;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8984649	8985255	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000635;gene_id=HG002_chrY_G0000183;Parent=HG002_chrY_T0000635;transcript_name=HG002_chrY_T0000635;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000635:1;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8985256	8985333	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000635;gene_id=HG002_chrY_G0000183;Parent=HG002_chrY_T0000635;transcript_name=HG002_chrY_T0000635;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000635:2;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8985334	8985461	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000635;gene_id=HG002_chrY_G0000183;Parent=HG002_chrY_T0000635;transcript_name=HG002_chrY_T0000635;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000635:2;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8985462	8985573	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000635;gene_id=HG002_chrY_G0000183;Parent=HG002_chrY_T0000635;transcript_name=HG002_chrY_T0000635;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000635:3;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8985574	8985674	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000635;gene_id=HG002_chrY_G0000183;Parent=HG002_chrY_T0000635;transcript_name=HG002_chrY_T0000635;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000635:3;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8985675	8985820	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000635;gene_id=HG002_chrY_G0000183;Parent=HG002_chrY_T0000635;transcript_name=HG002_chrY_T0000635;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000635:4;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8985821	8985926	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000635;gene_id=HG002_chrY_G0000183;Parent=HG002_chrY_T0000635;transcript_name=HG002_chrY_T0000635;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000635:4;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8985927	8986008	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000635;gene_id=HG002_chrY_G0000183;Parent=HG002_chrY_T0000635;transcript_name=HG002_chrY_T0000635;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000635:5;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8986009	8986702	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000635;gene_id=HG002_chrY_G0000183;Parent=HG002_chrY_T0000635;transcript_name=HG002_chrY_T0000635;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000635:5;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8986703	8986725	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000635;gene_id=HG002_chrY_G0000183;Parent=HG002_chrY_T0000635;transcript_name=HG002_chrY_T0000635;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000635:6;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8985303	8986920	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1;gene_id=HG002_chrY_G0000184;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=HG002_chrY_G0000184;Name=ENSG00000293749
HG002_chrY	CAT	transcript	8985303	8986911	1000	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000641;gene_id=HG002_chrY_G0000184;Parent=HG002_chrY_G0000184;transcript_name=HG002_chrY_T0000641;gene_name=ENSG00000293749;ID=HG002_chrY_T0000641;Name=ENSG00000293749
HG002_chrY	CAT	exon	8985303	8985333	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000641;gene_id=HG002_chrY_G0000184;Parent=HG002_chrY_T0000641;transcript_name=HG002_chrY_T0000641;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000641:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8985334	8985461	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000641;gene_id=HG002_chrY_G0000184;Parent=HG002_chrY_T0000641;transcript_name=HG002_chrY_T0000641;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000641:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8985462	8985820	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000641;gene_id=HG002_chrY_G0000184;Parent=HG002_chrY_T0000641;transcript_name=HG002_chrY_T0000641;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000641:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8985821	8985926	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000641;gene_id=HG002_chrY_G0000184;Parent=HG002_chrY_T0000641;transcript_name=HG002_chrY_T0000641;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000641:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8985927	8986008	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000641;gene_id=HG002_chrY_G0000184;Parent=HG002_chrY_T0000641;transcript_name=HG002_chrY_T0000641;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000641:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8986009	8986702	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000641;gene_id=HG002_chrY_G0000184;Parent=HG002_chrY_T0000641;transcript_name=HG002_chrY_T0000641;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000641:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8986703	8986911	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000641;gene_id=HG002_chrY_G0000184;Parent=HG002_chrY_T0000641;transcript_name=HG002_chrY_T0000641;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000641:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8985848	8986920	1000	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000642;gene_id=HG002_chrY_G0000184;Parent=HG002_chrY_G0000184;transcript_name=HG002_chrY_T0000642;gene_name=ENSG00000293749;ID=HG002_chrY_T0000642;Name=ENSG00000293749
HG002_chrY	CAT	exon	8985848	8986008	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000642;gene_id=HG002_chrY_G0000184;Parent=HG002_chrY_T0000642;transcript_name=HG002_chrY_T0000642;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000642:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8986009	8986702	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000642;gene_id=HG002_chrY_G0000184;Parent=HG002_chrY_T0000642;transcript_name=HG002_chrY_T0000642;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000642:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8986703	8986920	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000642;gene_id=HG002_chrY_G0000184;Parent=HG002_chrY_T0000642;transcript_name=HG002_chrY_T0000642;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000642:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	8994112	9001989	.	-	.	source_gene_common_name=FAM197Y8;source_gene=ENSG00000293362.1;gene_id=HG002_chrY_G0000185;gene_biotype=lncRNA;gene_name=FAM197Y8;gene_sources=liftoff;ID=HG002_chrY_G0000185;Name=FAM197Y8
HG002_chrY	CAT	transcript	8994112	9001989	1000	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000643;gene_id=HG002_chrY_G0000185;Parent=HG002_chrY_G0000185;transcript_name=HG002_chrY_T0000643;gene_name=FAM197Y8;ID=HG002_chrY_T0000643;Name=FAM197Y8
HG002_chrY	CAT	exon	8994112	8996240	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000643;gene_id=HG002_chrY_G0000185;Parent=HG002_chrY_T0000643;transcript_name=HG002_chrY_T0000643;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000643:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8996241	8999790	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000643;gene_id=HG002_chrY_G0000185;Parent=HG002_chrY_T0000643;transcript_name=HG002_chrY_T0000643;gene_name=FAM197Y8;ID=intron:HG002_chrY_T0000643:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8999791	8999876	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000643;gene_id=HG002_chrY_G0000185;Parent=HG002_chrY_T0000643;transcript_name=HG002_chrY_T0000643;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000643:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8999877	9001668	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000643;gene_id=HG002_chrY_G0000185;Parent=HG002_chrY_T0000643;transcript_name=HG002_chrY_T0000643;gene_name=FAM197Y8;ID=intron:HG002_chrY_T0000643:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9001669	9001778	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000643;gene_id=HG002_chrY_G0000185;Parent=HG002_chrY_T0000643;transcript_name=HG002_chrY_T0000643;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000643:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9001779	9001974	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000643;gene_id=HG002_chrY_G0000185;Parent=HG002_chrY_T0000643;transcript_name=HG002_chrY_T0000643;gene_name=FAM197Y8;ID=intron:HG002_chrY_T0000643:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9001975	9001989	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000643;gene_id=HG002_chrY_G0000185;Parent=HG002_chrY_T0000643;transcript_name=HG002_chrY_T0000643;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000643:3;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	8996180	9001770	1000	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000644;gene_id=HG002_chrY_G0000185;Parent=HG002_chrY_G0000185;transcript_name=HG002_chrY_T0000644;gene_name=FAM197Y8;ID=HG002_chrY_T0000644;Name=FAM197Y8
HG002_chrY	CAT	exon	8996180	8996240	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000644;gene_id=HG002_chrY_G0000185;Parent=HG002_chrY_T0000644;transcript_name=HG002_chrY_T0000644;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000644:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8996241	8999790	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000644;gene_id=HG002_chrY_G0000185;Parent=HG002_chrY_T0000644;transcript_name=HG002_chrY_T0000644;gene_name=FAM197Y8;ID=intron:HG002_chrY_T0000644:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	8999791	8999949	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000644;gene_id=HG002_chrY_G0000185;Parent=HG002_chrY_T0000644;transcript_name=HG002_chrY_T0000644;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000644:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	8999950	9001436	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000644;gene_id=HG002_chrY_G0000185;Parent=HG002_chrY_T0000644;transcript_name=HG002_chrY_T0000644;gene_name=FAM197Y8;ID=intron:HG002_chrY_T0000644:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9001437	9001582	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000644;gene_id=HG002_chrY_G0000185;Parent=HG002_chrY_T0000644;transcript_name=HG002_chrY_T0000644;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000644:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9001583	9001668	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000644;gene_id=HG002_chrY_G0000185;Parent=HG002_chrY_T0000644;transcript_name=HG002_chrY_T0000644;gene_name=FAM197Y8;ID=intron:HG002_chrY_T0000644:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9001669	9001770	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000644;gene_id=HG002_chrY_G0000185;Parent=HG002_chrY_T0000644;transcript_name=HG002_chrY_T0000644;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000644:3;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9001434	9003400	.	-	.	source_gene_common_name=FAM197Y8;source_gene=ENSG00000225560.7_2;gene_id=HG002_chrY_G0000186;gene_biotype=transcribed_processed_pseudogene;gene_name=FAM197Y8;gene_sources=liftoff;ID=HG002_chrY_G0000186;Name=FAM197Y8
HG002_chrY	CAT	transcript	9001434	9003400	1000	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7_2;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7_2;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000645;gene_id=HG002_chrY_G0000186;Parent=HG002_chrY_G0000186;transcript_name=HG002_chrY_T0000645;gene_name=FAM197Y8;ID=HG002_chrY_T0000645;Name=FAM197Y8
HG002_chrY	CAT	exon	9001434	9001582	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7_2;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7_2;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000645;gene_id=HG002_chrY_G0000186;Parent=HG002_chrY_T0000645;transcript_name=HG002_chrY_T0000645;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000645:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9001583	9001668	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7_2;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7_2;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000645;gene_id=HG002_chrY_G0000186;Parent=HG002_chrY_T0000645;transcript_name=HG002_chrY_T0000645;gene_name=FAM197Y8;ID=intron:HG002_chrY_T0000645:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9001669	9001778	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7_2;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7_2;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000645;gene_id=HG002_chrY_G0000186;Parent=HG002_chrY_T0000645;transcript_name=HG002_chrY_T0000645;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000645:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9001779	9003099	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7_2;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7_2;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000645;gene_id=HG002_chrY_G0000186;Parent=HG002_chrY_T0000645;transcript_name=HG002_chrY_T0000645;gene_name=FAM197Y8;ID=intron:HG002_chrY_T0000645:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9003100	9003400	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7_2;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7_2;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000645;gene_id=HG002_chrY_G0000186;Parent=HG002_chrY_T0000645;transcript_name=HG002_chrY_T0000645;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000645:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9004387	9007192	.	+	.	source_gene_common_name=ENSG00000301844;source_gene=ENSG00000301844.1_1;gene_id=HG002_chrY_G0000187;gene_biotype=lncRNA;gene_name=ENSG00000301844;gene_sources=liftoff;ID=HG002_chrY_G0000187;Name=ENSG00000301844
HG002_chrY	CAT	transcript	9004387	9007192	1000	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000646;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_G0000187;transcript_name=HG002_chrY_T0000646;gene_name=ENSG00000301844;ID=HG002_chrY_T0000646;Name=ENSG00000301844
HG002_chrY	CAT	exon	9004387	9004915	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000646;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000646;transcript_name=HG002_chrY_T0000646;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000646:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9004916	9005522	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000646;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000646;transcript_name=HG002_chrY_T0000646;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000646:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9005523	9005600	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000646;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000646;transcript_name=HG002_chrY_T0000646;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000646:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9005601	9005728	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000646;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000646;transcript_name=HG002_chrY_T0000646;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000646:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9005729	9005840	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000646;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000646;transcript_name=HG002_chrY_T0000646;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000646:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9005841	9005941	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000646;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000646;transcript_name=HG002_chrY_T0000646;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000646:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9005942	9006087	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000646;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000646;transcript_name=HG002_chrY_T0000646;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000646:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9006088	9006193	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000646;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000646;transcript_name=HG002_chrY_T0000646;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000646:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9006194	9006275	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000646;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000646;transcript_name=HG002_chrY_T0000646;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000646:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9006276	9006969	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000646;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000646;transcript_name=HG002_chrY_T0000646;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000646:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9006970	9007192	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000646;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000646;transcript_name=HG002_chrY_T0000646;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000646:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9004396	9007187	1000	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000647;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_G0000187;transcript_name=HG002_chrY_T0000647;gene_name=ENSG00000301844;ID=HG002_chrY_T0000647;Name=ENSG00000301844
HG002_chrY	CAT	exon	9004396	9004915	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000647;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000647;transcript_name=HG002_chrY_T0000647;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000647:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9004916	9005522	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000647;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000647;transcript_name=HG002_chrY_T0000647;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000647:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9005523	9005600	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000647;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000647;transcript_name=HG002_chrY_T0000647;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000647:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9005601	9005728	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000647;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000647;transcript_name=HG002_chrY_T0000647;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000647:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9005729	9005840	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000647;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000647;transcript_name=HG002_chrY_T0000647;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000647:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9005841	9005948	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000647;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000647;transcript_name=HG002_chrY_T0000647;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000647:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9005949	9006087	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000647;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000647;transcript_name=HG002_chrY_T0000647;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000647:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9006088	9006193	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000647;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000647;transcript_name=HG002_chrY_T0000647;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000647:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9006194	9006275	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000647;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000647;transcript_name=HG002_chrY_T0000647;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000647:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9006276	9006969	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000647;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000647;transcript_name=HG002_chrY_T0000647;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000647:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9006970	9007187	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000647;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000647;transcript_name=HG002_chrY_T0000647;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000647:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9004418	9007182	1000	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000648;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_G0000187;transcript_name=HG002_chrY_T0000648;gene_name=ENSG00000301844;ID=HG002_chrY_T0000648;Name=ENSG00000301844
HG002_chrY	CAT	exon	9004418	9004915	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000648;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000648;transcript_name=HG002_chrY_T0000648;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000648:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9004916	9005522	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000648;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000648;transcript_name=HG002_chrY_T0000648;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000648:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9005523	9005600	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000648;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000648;transcript_name=HG002_chrY_T0000648;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000648:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9005601	9005728	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000648;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000648;transcript_name=HG002_chrY_T0000648;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000648:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9005729	9005840	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000648;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000648;transcript_name=HG002_chrY_T0000648;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000648:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9005841	9005941	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000648;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000648;transcript_name=HG002_chrY_T0000648;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000648:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9005942	9006275	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000648;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000648;transcript_name=HG002_chrY_T0000648;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000648:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9006276	9006969	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000648;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000648;transcript_name=HG002_chrY_T0000648;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000648:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9006970	9007182	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000648;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000648;transcript_name=HG002_chrY_T0000648;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000648:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9004428	9007187	1000	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000649;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_G0000187;transcript_name=HG002_chrY_T0000649;gene_name=ENSG00000301844;ID=HG002_chrY_T0000649;Name=ENSG00000301844
HG002_chrY	CAT	exon	9004428	9004915	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000649;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000649;transcript_name=HG002_chrY_T0000649;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000649:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9004916	9005522	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000649;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000649;transcript_name=HG002_chrY_T0000649;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000649:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9005523	9005600	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000649;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000649;transcript_name=HG002_chrY_T0000649;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000649:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9005601	9005728	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000649;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000649;transcript_name=HG002_chrY_T0000649;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000649:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9005729	9006087	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000649;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000649;transcript_name=HG002_chrY_T0000649;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000649:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9006088	9006193	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000649;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000649;transcript_name=HG002_chrY_T0000649;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000649:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9006194	9006275	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000649;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000649;transcript_name=HG002_chrY_T0000649;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000649:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9006276	9006969	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000649;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000649;transcript_name=HG002_chrY_T0000649;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000649:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9006970	9007187	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000649;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000649;transcript_name=HG002_chrY_T0000649;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000649:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9004430	9007187	1000	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000650;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_G0000187;transcript_name=HG002_chrY_T0000650;gene_name=ENSG00000301844;ID=HG002_chrY_T0000650;Name=ENSG00000301844
HG002_chrY	CAT	exon	9004430	9004915	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000650;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000650;transcript_name=HG002_chrY_T0000650;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000650:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9004916	9005522	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000650;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000650;transcript_name=HG002_chrY_T0000650;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000650:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9005523	9005600	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000650;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000650;transcript_name=HG002_chrY_T0000650;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000650:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9005601	9005728	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000650;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000650;transcript_name=HG002_chrY_T0000650;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000650:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9005729	9005840	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000650;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000650;transcript_name=HG002_chrY_T0000650;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000650:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9005841	9005941	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000650;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000650;transcript_name=HG002_chrY_T0000650;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000650:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9005942	9006087	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000650;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000650;transcript_name=HG002_chrY_T0000650;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000650:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9006088	9006182	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000650;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000650;transcript_name=HG002_chrY_T0000650;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000650:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9006183	9006275	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000650;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000650;transcript_name=HG002_chrY_T0000650;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000650:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9006276	9006969	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000650;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000650;transcript_name=HG002_chrY_T0000650;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000650:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9006970	9007187	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000650;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000650;transcript_name=HG002_chrY_T0000650;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000650:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9004430	9007180	1000	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000651;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_G0000187;transcript_name=HG002_chrY_T0000651;gene_name=ENSG00000301844;ID=HG002_chrY_T0000651;Name=ENSG00000301844
HG002_chrY	CAT	exon	9004430	9004915	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000651;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000651;transcript_name=HG002_chrY_T0000651;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000651:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9004916	9005522	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000651;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000651;transcript_name=HG002_chrY_T0000651;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000651:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9005523	9005600	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000651;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000651;transcript_name=HG002_chrY_T0000651;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000651:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9005601	9005728	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000651;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000651;transcript_name=HG002_chrY_T0000651;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000651:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9005729	9006275	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000651;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000651;transcript_name=HG002_chrY_T0000651;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000651:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9006276	9006969	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000651;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000651;transcript_name=HG002_chrY_T0000651;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000651:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9006970	9007180	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000651;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000651;transcript_name=HG002_chrY_T0000651;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000651:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9004450	9007187	1000	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000653;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_G0000187;transcript_name=HG002_chrY_T0000653;gene_name=ENSG00000301844;ID=HG002_chrY_T0000653;Name=ENSG00000301844
HG002_chrY	CAT	exon	9004450	9004915	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000653;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000653;transcript_name=HG002_chrY_T0000653;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000653:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9004916	9005522	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000653;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000653;transcript_name=HG002_chrY_T0000653;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000653:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9005523	9005600	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000653;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000653;transcript_name=HG002_chrY_T0000653;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000653:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9005601	9005728	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000653;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000653;transcript_name=HG002_chrY_T0000653;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000653:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9005729	9006087	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000653;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000653;transcript_name=HG002_chrY_T0000653;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000653:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9006088	9006182	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000653;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000653;transcript_name=HG002_chrY_T0000653;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000653:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9006183	9006275	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000653;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000653;transcript_name=HG002_chrY_T0000653;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000653:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9006276	9006969	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000653;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000653;transcript_name=HG002_chrY_T0000653;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000653:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9006970	9007187	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000653;gene_id=HG002_chrY_G0000187;Parent=HG002_chrY_T0000653;transcript_name=HG002_chrY_T0000653;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000653:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9004430	9007180	.	+	.	source_gene_common_name=TSPY7P;source_gene=ENSG00000188656.8_1;gene_id=HG002_chrY_G0000188;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY7P;gene_sources=liftoff;ID=HG002_chrY_G0000188;Name=TSPY7P
HG002_chrY	CAT	transcript	9004430	9007180	1000	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000652;gene_id=HG002_chrY_G0000188;Parent=HG002_chrY_G0000188;transcript_name=HG002_chrY_T0000652;gene_name=TSPY7P;ID=HG002_chrY_T0000652;Name=TSPY7P
HG002_chrY	CAT	exon	9004430	9004915	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000652;gene_id=HG002_chrY_G0000188;Parent=HG002_chrY_T0000652;transcript_name=HG002_chrY_T0000652;gene_name=TSPY7P;ID=exon:HG002_chrY_T0000652:0;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9004916	9005522	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000652;gene_id=HG002_chrY_G0000188;Parent=HG002_chrY_T0000652;transcript_name=HG002_chrY_T0000652;gene_name=TSPY7P;ID=intron:HG002_chrY_T0000652:0;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9005523	9005600	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000652;gene_id=HG002_chrY_G0000188;Parent=HG002_chrY_T0000652;transcript_name=HG002_chrY_T0000652;gene_name=TSPY7P;ID=exon:HG002_chrY_T0000652:1;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9005601	9005728	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000652;gene_id=HG002_chrY_G0000188;Parent=HG002_chrY_T0000652;transcript_name=HG002_chrY_T0000652;gene_name=TSPY7P;ID=intron:HG002_chrY_T0000652:1;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9005729	9005840	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000652;gene_id=HG002_chrY_G0000188;Parent=HG002_chrY_T0000652;transcript_name=HG002_chrY_T0000652;gene_name=TSPY7P;ID=exon:HG002_chrY_T0000652:2;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9005841	9005941	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000652;gene_id=HG002_chrY_G0000188;Parent=HG002_chrY_T0000652;transcript_name=HG002_chrY_T0000652;gene_name=TSPY7P;ID=intron:HG002_chrY_T0000652:2;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9005942	9006087	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000652;gene_id=HG002_chrY_G0000188;Parent=HG002_chrY_T0000652;transcript_name=HG002_chrY_T0000652;gene_name=TSPY7P;ID=exon:HG002_chrY_T0000652:3;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9006088	9006193	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000652;gene_id=HG002_chrY_G0000188;Parent=HG002_chrY_T0000652;transcript_name=HG002_chrY_T0000652;gene_name=TSPY7P;ID=intron:HG002_chrY_T0000652:3;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9006194	9006275	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000652;gene_id=HG002_chrY_G0000188;Parent=HG002_chrY_T0000652;transcript_name=HG002_chrY_T0000652;gene_name=TSPY7P;ID=exon:HG002_chrY_T0000652:4;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9006276	9006969	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000652;gene_id=HG002_chrY_G0000188;Parent=HG002_chrY_T0000652;transcript_name=HG002_chrY_T0000652;gene_name=TSPY7P;ID=intron:HG002_chrY_T0000652:4;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9006970	9007180	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000652;gene_id=HG002_chrY_G0000188;Parent=HG002_chrY_T0000652;transcript_name=HG002_chrY_T0000652;gene_name=TSPY7P;ID=exon:HG002_chrY_T0000652:5;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9014417	9022293	.	-	.	source_gene_common_name=FAM197Y7;source_gene=ENSG00000228383.7;gene_id=HG002_chrY_G0000189;gene_biotype=lncRNA;gene_name=FAM197Y7;gene_sources=liftoff;ID=HG002_chrY_G0000189;Name=FAM197Y7
HG002_chrY	CAT	transcript	9014417	9022293	1000	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000654;gene_id=HG002_chrY_G0000189;Parent=HG002_chrY_G0000189;transcript_name=HG002_chrY_T0000654;gene_name=FAM197Y7;ID=HG002_chrY_T0000654;Name=FAM197Y7
HG002_chrY	CAT	exon	9014417	9016530	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000654;gene_id=HG002_chrY_G0000189;Parent=HG002_chrY_T0000654;transcript_name=HG002_chrY_T0000654;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000654:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9016531	9020079	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000654;gene_id=HG002_chrY_G0000189;Parent=HG002_chrY_T0000654;transcript_name=HG002_chrY_T0000654;gene_name=FAM197Y7;ID=intron:HG002_chrY_T0000654:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9020080	9020165	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000654;gene_id=HG002_chrY_G0000189;Parent=HG002_chrY_T0000654;transcript_name=HG002_chrY_T0000654;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000654:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9020166	9021972	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000654;gene_id=HG002_chrY_G0000189;Parent=HG002_chrY_T0000654;transcript_name=HG002_chrY_T0000654;gene_name=FAM197Y7;ID=intron:HG002_chrY_T0000654:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9021973	9022082	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000654;gene_id=HG002_chrY_G0000189;Parent=HG002_chrY_T0000654;transcript_name=HG002_chrY_T0000654;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000654:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9022083	9022278	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000654;gene_id=HG002_chrY_G0000189;Parent=HG002_chrY_T0000654;transcript_name=HG002_chrY_T0000654;gene_name=FAM197Y7;ID=intron:HG002_chrY_T0000654:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9022279	9022293	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000654;gene_id=HG002_chrY_G0000189;Parent=HG002_chrY_T0000654;transcript_name=HG002_chrY_T0000654;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000654:3;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9016471	9022074	1000	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000655;gene_id=HG002_chrY_G0000189;Parent=HG002_chrY_G0000189;transcript_name=HG002_chrY_T0000655;gene_name=FAM197Y7;ID=HG002_chrY_T0000655;Name=FAM197Y7
HG002_chrY	CAT	exon	9016471	9016530	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000655;gene_id=HG002_chrY_G0000189;Parent=HG002_chrY_T0000655;transcript_name=HG002_chrY_T0000655;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000655:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9016531	9020079	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000655;gene_id=HG002_chrY_G0000189;Parent=HG002_chrY_T0000655;transcript_name=HG002_chrY_T0000655;gene_name=FAM197Y7;ID=intron:HG002_chrY_T0000655:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9020080	9020238	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000655;gene_id=HG002_chrY_G0000189;Parent=HG002_chrY_T0000655;transcript_name=HG002_chrY_T0000655;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000655:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9020239	9021740	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000655;gene_id=HG002_chrY_G0000189;Parent=HG002_chrY_T0000655;transcript_name=HG002_chrY_T0000655;gene_name=FAM197Y7;ID=intron:HG002_chrY_T0000655:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9021741	9021886	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000655;gene_id=HG002_chrY_G0000189;Parent=HG002_chrY_T0000655;transcript_name=HG002_chrY_T0000655;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000655:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9021887	9021972	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000655;gene_id=HG002_chrY_G0000189;Parent=HG002_chrY_T0000655;transcript_name=HG002_chrY_T0000655;gene_name=FAM197Y7;ID=intron:HG002_chrY_T0000655:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9021973	9022074	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000655;gene_id=HG002_chrY_G0000189;Parent=HG002_chrY_T0000655;transcript_name=HG002_chrY_T0000655;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000655:3;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9021741	9023733	.	-	.	source_gene_common_name=ENSG00000286120;source_gene=ENSG00000286120.1_4;gene_id=HG002_chrY_G0000190;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000286120;gene_sources=liftoff;ID=HG002_chrY_G0000190;Name=ENSG00000286120
HG002_chrY	CAT	transcript	9021741	9023733	1000	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG002_chrY_T0000656;gene_id=HG002_chrY_G0000190;Parent=HG002_chrY_G0000190;transcript_name=HG002_chrY_T0000656;gene_name=ENSG00000286120;ID=HG002_chrY_T0000656;Name=ENSG00000286120
HG002_chrY	CAT	exon	9021741	9021886	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG002_chrY_T0000656;gene_id=HG002_chrY_G0000190;Parent=HG002_chrY_T0000656;transcript_name=HG002_chrY_T0000656;gene_name=ENSG00000286120;ID=exon:HG002_chrY_T0000656:0;Name=ENSG00000286120;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9021887	9023422	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG002_chrY_T0000656;gene_id=HG002_chrY_G0000190;Parent=HG002_chrY_T0000656;transcript_name=HG002_chrY_T0000656;gene_name=ENSG00000286120;ID=intron:HG002_chrY_T0000656:0;Name=ENSG00000286120;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9023423	9023733	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG002_chrY_T0000656;gene_id=HG002_chrY_G0000190;Parent=HG002_chrY_T0000656;transcript_name=HG002_chrY_T0000656;gene_name=ENSG00000286120;ID=exon:HG002_chrY_T0000656:1;Name=ENSG00000286120;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9024687	9027501	.	+	.	source_gene_common_name=TSPY4;source_gene=ENSG00000233803.9;alternative_source_transcripts=ENST00000287721.13;gene_id=HG002_chrY_G0000191;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG002_chrY_G0000191;Name=TSPY4
HG002_chrY	CAT	transcript	9024687	9027501	100	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000657;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_G0000191;transcript_name=HG002_chrY_T0000657;gene_name=TSPY4;ID=HG002_chrY_T0000657;Name=TSPY4
HG002_chrY	CAT	exon	9024687	9025236	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000657;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000657;transcript_name=HG002_chrY_T0000657;gene_name=TSPY4;ID=exon:HG002_chrY_T0000657:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9024733	9025236	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000657;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000657;transcript_name=HG002_chrY_T0000657;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000657:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9024733	9024735	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000657;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000657;transcript_name=HG002_chrY_T0000657;gene_name=TSPY4;ID=start_codon:HG002_chrY_T0000657;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9025237	9025843	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000657;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000657;transcript_name=HG002_chrY_T0000657;gene_name=TSPY4;ID=intron:HG002_chrY_T0000657:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9025844	9025921	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000657;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000657;transcript_name=HG002_chrY_T0000657;gene_name=TSPY4;ID=exon:HG002_chrY_T0000657:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9025844	9025921	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000657;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000657;transcript_name=HG002_chrY_T0000657;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000657:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9025922	9026049	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000657;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000657;transcript_name=HG002_chrY_T0000657;gene_name=TSPY4;ID=intron:HG002_chrY_T0000657:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9026050	9026161	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000657;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000657;transcript_name=HG002_chrY_T0000657;gene_name=TSPY4;ID=exon:HG002_chrY_T0000657:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9026050	9026161	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000657;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000657;transcript_name=HG002_chrY_T0000657;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000657:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9026162	9026262	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000657;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000657;transcript_name=HG002_chrY_T0000657;gene_name=TSPY4;ID=intron:HG002_chrY_T0000657:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9026263	9026408	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000657;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000657;transcript_name=HG002_chrY_T0000657;gene_name=TSPY4;ID=exon:HG002_chrY_T0000657:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9026263	9026408	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000657;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000657;transcript_name=HG002_chrY_T0000657;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000657:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9026409	9026514	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000657;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000657;transcript_name=HG002_chrY_T0000657;gene_name=TSPY4;ID=intron:HG002_chrY_T0000657:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9026515	9026596	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000657;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000657;transcript_name=HG002_chrY_T0000657;gene_name=TSPY4;ID=exon:HG002_chrY_T0000657:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9026515	9026596	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000657;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000657;transcript_name=HG002_chrY_T0000657;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000657:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9026597	9027290	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000657;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000657;transcript_name=HG002_chrY_T0000657;gene_name=TSPY4;ID=intron:HG002_chrY_T0000657:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9027291	9027501	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000657;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000657;transcript_name=HG002_chrY_T0000657;gene_name=TSPY4;ID=exon:HG002_chrY_T0000657:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9027291	9027313	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000657;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000657;transcript_name=HG002_chrY_T0000657;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000657:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9027311	9027313	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG002_chrY_T0000657;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000657;transcript_name=HG002_chrY_T0000657;gene_name=TSPY4;ID=stop_codon:HG002_chrY_T0000657;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9024687	9027380	100	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000658;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_G0000191;transcript_name=HG002_chrY_T0000658;gene_name=TSPY4;ID=HG002_chrY_T0000658;Name=TSPY4
HG002_chrY	CAT	exon	9024687	9024819	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000658;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000658;transcript_name=HG002_chrY_T0000658;gene_name=TSPY4;ID=exon:HG002_chrY_T0000658:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9024733	9024819	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000658;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000658;transcript_name=HG002_chrY_T0000658;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000658:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9024733	9024735	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000658;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000658;transcript_name=HG002_chrY_T0000658;gene_name=TSPY4;ID=start_codon:HG002_chrY_T0000658;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9024820	9025098	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000658;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000658;transcript_name=HG002_chrY_T0000658;gene_name=TSPY4;ID=intron:HG002_chrY_T0000658:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9025099	9025236	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000658;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000658;transcript_name=HG002_chrY_T0000658;gene_name=TSPY4;ID=exon:HG002_chrY_T0000658:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9025099	9025236	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000658;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000658;transcript_name=HG002_chrY_T0000658;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000658:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9025237	9025843	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000658;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000658;transcript_name=HG002_chrY_T0000658;gene_name=TSPY4;ID=intron:HG002_chrY_T0000658:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9025844	9025921	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000658;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000658;transcript_name=HG002_chrY_T0000658;gene_name=TSPY4;ID=exon:HG002_chrY_T0000658:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9025844	9025921	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000658;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000658;transcript_name=HG002_chrY_T0000658;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000658:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9025922	9026049	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000658;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000658;transcript_name=HG002_chrY_T0000658;gene_name=TSPY4;ID=intron:HG002_chrY_T0000658:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9026050	9026161	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000658;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000658;transcript_name=HG002_chrY_T0000658;gene_name=TSPY4;ID=exon:HG002_chrY_T0000658:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9026050	9026161	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000658;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000658;transcript_name=HG002_chrY_T0000658;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000658:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9026162	9026262	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000658;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000658;transcript_name=HG002_chrY_T0000658;gene_name=TSPY4;ID=intron:HG002_chrY_T0000658:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9026263	9026408	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000658;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000658;transcript_name=HG002_chrY_T0000658;gene_name=TSPY4;ID=exon:HG002_chrY_T0000658:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9026263	9026408	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000658;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000658;transcript_name=HG002_chrY_T0000658;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000658:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9026409	9026514	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000658;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000658;transcript_name=HG002_chrY_T0000658;gene_name=TSPY4;ID=intron:HG002_chrY_T0000658:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9026515	9026596	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000658;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000658;transcript_name=HG002_chrY_T0000658;gene_name=TSPY4;ID=exon:HG002_chrY_T0000658:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9026515	9026596	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000658;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000658;transcript_name=HG002_chrY_T0000658;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000658:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9026597	9027290	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000658;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000658;transcript_name=HG002_chrY_T0000658;gene_name=TSPY4;ID=intron:HG002_chrY_T0000658:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9027291	9027380	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000658;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000658;transcript_name=HG002_chrY_T0000658;gene_name=TSPY4;ID=exon:HG002_chrY_T0000658:6;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9027291	9027313	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000658;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000658;transcript_name=HG002_chrY_T0000658;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000658:6;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9027311	9027313	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000658;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000658;transcript_name=HG002_chrY_T0000658;gene_name=TSPY4;ID=stop_codon:HG002_chrY_T0000658;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9024733	9027500	100	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000659;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_G0000191;transcript_name=HG002_chrY_T0000659;gene_name=TSPY4;ID=HG002_chrY_T0000659;Name=TSPY4
HG002_chrY	CAT	exon	9024733	9025236	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000659;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000659;transcript_name=HG002_chrY_T0000659;gene_name=TSPY4;ID=exon:HG002_chrY_T0000659:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9024733	9025236	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000659;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000659;transcript_name=HG002_chrY_T0000659;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000659:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9024733	9024735	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000659;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000659;transcript_name=HG002_chrY_T0000659;gene_name=TSPY4;ID=start_codon:HG002_chrY_T0000659;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9025237	9025843	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000659;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000659;transcript_name=HG002_chrY_T0000659;gene_name=TSPY4;ID=intron:HG002_chrY_T0000659:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9025844	9025921	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000659;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000659;transcript_name=HG002_chrY_T0000659;gene_name=TSPY4;ID=exon:HG002_chrY_T0000659:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9025844	9025921	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000659;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000659;transcript_name=HG002_chrY_T0000659;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000659:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9025922	9026049	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000659;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000659;transcript_name=HG002_chrY_T0000659;gene_name=TSPY4;ID=intron:HG002_chrY_T0000659:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9026050	9026161	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000659;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000659;transcript_name=HG002_chrY_T0000659;gene_name=TSPY4;ID=exon:HG002_chrY_T0000659:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9026050	9026161	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000659;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000659;transcript_name=HG002_chrY_T0000659;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000659:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9026162	9026262	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000659;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000659;transcript_name=HG002_chrY_T0000659;gene_name=TSPY4;ID=intron:HG002_chrY_T0000659:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9026263	9026408	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000659;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000659;transcript_name=HG002_chrY_T0000659;gene_name=TSPY4;ID=exon:HG002_chrY_T0000659:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9026263	9026408	.	+	2	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000659;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000659;transcript_name=HG002_chrY_T0000659;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000659:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9026409	9026503	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000659;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000659;transcript_name=HG002_chrY_T0000659;gene_name=TSPY4;ID=intron:HG002_chrY_T0000659:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9026504	9026596	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000659;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000659;transcript_name=HG002_chrY_T0000659;gene_name=TSPY4;ID=exon:HG002_chrY_T0000659:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9026504	9026566	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000659;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000659;transcript_name=HG002_chrY_T0000659;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000659:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9026564	9026566	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000659;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000659;transcript_name=HG002_chrY_T0000659;gene_name=TSPY4;ID=stop_codon:HG002_chrY_T0000659;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9026597	9027290	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000659;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000659;transcript_name=HG002_chrY_T0000659;gene_name=TSPY4;ID=intron:HG002_chrY_T0000659:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9027291	9027500	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG002_chrY_T0000659;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000659;transcript_name=HG002_chrY_T0000659;gene_name=TSPY4;ID=exon:HG002_chrY_T0000659:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9024733	9027507	1000	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG002_chrY_T0000660;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_G0000191;transcript_name=HG002_chrY_T0000660;gene_name=TSPY4;ID=HG002_chrY_T0000660;Name=TSPY4
HG002_chrY	CAT	exon	9024733	9025236	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG002_chrY_T0000660;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000660;transcript_name=HG002_chrY_T0000660;gene_name=TSPY4;ID=exon:HG002_chrY_T0000660:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9025237	9025843	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG002_chrY_T0000660;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000660;transcript_name=HG002_chrY_T0000660;gene_name=TSPY4;ID=intron:HG002_chrY_T0000660:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9025844	9025921	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG002_chrY_T0000660;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000660;transcript_name=HG002_chrY_T0000660;gene_name=TSPY4;ID=exon:HG002_chrY_T0000660:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9025922	9026049	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG002_chrY_T0000660;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000660;transcript_name=HG002_chrY_T0000660;gene_name=TSPY4;ID=intron:HG002_chrY_T0000660:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9026050	9026596	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG002_chrY_T0000660;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000660;transcript_name=HG002_chrY_T0000660;gene_name=TSPY4;ID=exon:HG002_chrY_T0000660:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9026597	9026723	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG002_chrY_T0000660;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000660;transcript_name=HG002_chrY_T0000660;gene_name=TSPY4;ID=intron:HG002_chrY_T0000660:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9026724	9027507	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG002_chrY_T0000660;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000660;transcript_name=HG002_chrY_T0000660;gene_name=TSPY4;ID=exon:HG002_chrY_T0000660:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9026111	9027492	1000	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000661;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_G0000191;transcript_name=HG002_chrY_T0000661;gene_name=TSPY4;ID=HG002_chrY_T0000661;Name=TSPY4
HG002_chrY	CAT	exon	9026111	9026408	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000661;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000661;transcript_name=HG002_chrY_T0000661;gene_name=TSPY4;ID=exon:HG002_chrY_T0000661:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9026409	9026503	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000661;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000661;transcript_name=HG002_chrY_T0000661;gene_name=TSPY4;ID=intron:HG002_chrY_T0000661:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9026504	9026596	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000661;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000661;transcript_name=HG002_chrY_T0000661;gene_name=TSPY4;ID=exon:HG002_chrY_T0000661:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9026597	9027290	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000661;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000661;transcript_name=HG002_chrY_T0000661;gene_name=TSPY4;ID=intron:HG002_chrY_T0000661:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9027291	9027492	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000661;gene_id=HG002_chrY_G0000191;Parent=HG002_chrY_T0000661;transcript_name=HG002_chrY_T0000661;gene_name=TSPY4;ID=exon:HG002_chrY_T0000661:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9036676	9042418	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=HG002_chrY_G0000192;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000192;Name=FAM197Y5
HG002_chrY	CAT	transcript	9036676	9042418	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000662;gene_id=HG002_chrY_G0000192;Parent=HG002_chrY_G0000192;transcript_name=HG002_chrY_T0000662;gene_name=FAM197Y5;ID=HG002_chrY_T0000662;Name=FAM197Y5
HG002_chrY	CAT	exon	9036676	9036865	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000662;gene_id=HG002_chrY_G0000192;Parent=HG002_chrY_T0000662;transcript_name=HG002_chrY_T0000662;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000662:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9036866	9040415	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000662;gene_id=HG002_chrY_G0000192;Parent=HG002_chrY_T0000662;transcript_name=HG002_chrY_T0000662;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000662:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9040416	9040501	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000662;gene_id=HG002_chrY_G0000192;Parent=HG002_chrY_T0000662;transcript_name=HG002_chrY_T0000662;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000662:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9040502	9042304	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000662;gene_id=HG002_chrY_G0000192;Parent=HG002_chrY_T0000662;transcript_name=HG002_chrY_T0000662;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000662:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9042305	9042418	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000662;gene_id=HG002_chrY_G0000192;Parent=HG002_chrY_T0000662;transcript_name=HG002_chrY_T0000662;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000662:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9036806	9042406	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000663;gene_id=HG002_chrY_G0000192;Parent=HG002_chrY_G0000192;transcript_name=HG002_chrY_T0000663;gene_name=FAM197Y5;ID=HG002_chrY_T0000663;Name=FAM197Y5
HG002_chrY	CAT	exon	9036806	9036865	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000663;gene_id=HG002_chrY_G0000192;Parent=HG002_chrY_T0000663;transcript_name=HG002_chrY_T0000663;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000663:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9036866	9040415	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000663;gene_id=HG002_chrY_G0000192;Parent=HG002_chrY_T0000663;transcript_name=HG002_chrY_T0000663;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000663:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9040416	9040574	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000663;gene_id=HG002_chrY_G0000192;Parent=HG002_chrY_T0000663;transcript_name=HG002_chrY_T0000663;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000663:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9040575	9042072	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000663;gene_id=HG002_chrY_G0000192;Parent=HG002_chrY_T0000663;transcript_name=HG002_chrY_T0000663;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000663:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9042073	9042218	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000663;gene_id=HG002_chrY_G0000192;Parent=HG002_chrY_T0000663;transcript_name=HG002_chrY_T0000663;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000663:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9042219	9042304	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000663;gene_id=HG002_chrY_G0000192;Parent=HG002_chrY_T0000663;transcript_name=HG002_chrY_T0000663;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000663:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9042305	9042406	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000663;gene_id=HG002_chrY_G0000192;Parent=HG002_chrY_T0000663;transcript_name=HG002_chrY_T0000663;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000663:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9042073	9044065	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_12;gene_id=HG002_chrY_G0000193;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000193;Name=FAM197Y5
HG002_chrY	CAT	transcript	9042073	9044065	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_12;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_12;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000664;gene_id=HG002_chrY_G0000193;Parent=HG002_chrY_G0000193;transcript_name=HG002_chrY_T0000664;gene_name=FAM197Y5;ID=HG002_chrY_T0000664;Name=FAM197Y5
HG002_chrY	CAT	exon	9042073	9042218	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_12;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_12;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000664;gene_id=HG002_chrY_G0000193;Parent=HG002_chrY_T0000664;transcript_name=HG002_chrY_T0000664;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000664:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9042219	9043754	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_12;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_12;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000664;gene_id=HG002_chrY_G0000193;Parent=HG002_chrY_T0000664;transcript_name=HG002_chrY_T0000664;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000664:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9043755	9044065	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_12;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_12;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000664;gene_id=HG002_chrY_G0000193;Parent=HG002_chrY_T0000664;transcript_name=HG002_chrY_T0000664;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000664:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9045019	9047833	.	+	.	source_gene_common_name=TSPY9;source_gene=ENSG00000238074.6;gene_id=HG002_chrY_G0000194;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff;ID=HG002_chrY_G0000194;Name=TSPY9
HG002_chrY	CAT	transcript	9045019	9047833	100	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000665;gene_id=HG002_chrY_G0000194;Parent=HG002_chrY_G0000194;transcript_name=HG002_chrY_T0000665;gene_name=TSPY9;ID=HG002_chrY_T0000665;Name=TSPY9
HG002_chrY	CAT	exon	9045019	9045568	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000665;gene_id=HG002_chrY_G0000194;Parent=HG002_chrY_T0000665;transcript_name=HG002_chrY_T0000665;gene_name=TSPY9;ID=exon:HG002_chrY_T0000665:0;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9045065	9045568	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000665;gene_id=HG002_chrY_G0000194;Parent=HG002_chrY_T0000665;transcript_name=HG002_chrY_T0000665;gene_name=TSPY9;ID=CDS:HG002_chrY_T0000665:0;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9045065	9045067	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000665;gene_id=HG002_chrY_G0000194;Parent=HG002_chrY_T0000665;transcript_name=HG002_chrY_T0000665;gene_name=TSPY9;ID=start_codon:HG002_chrY_T0000665;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9045569	9046175	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000665;gene_id=HG002_chrY_G0000194;Parent=HG002_chrY_T0000665;transcript_name=HG002_chrY_T0000665;gene_name=TSPY9;ID=intron:HG002_chrY_T0000665:0;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9046176	9046253	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000665;gene_id=HG002_chrY_G0000194;Parent=HG002_chrY_T0000665;transcript_name=HG002_chrY_T0000665;gene_name=TSPY9;ID=exon:HG002_chrY_T0000665:1;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9046176	9046253	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000665;gene_id=HG002_chrY_G0000194;Parent=HG002_chrY_T0000665;transcript_name=HG002_chrY_T0000665;gene_name=TSPY9;ID=CDS:HG002_chrY_T0000665:1;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9046254	9046381	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000665;gene_id=HG002_chrY_G0000194;Parent=HG002_chrY_T0000665;transcript_name=HG002_chrY_T0000665;gene_name=TSPY9;ID=intron:HG002_chrY_T0000665:1;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9046382	9046493	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000665;gene_id=HG002_chrY_G0000194;Parent=HG002_chrY_T0000665;transcript_name=HG002_chrY_T0000665;gene_name=TSPY9;ID=exon:HG002_chrY_T0000665:2;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9046382	9046493	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000665;gene_id=HG002_chrY_G0000194;Parent=HG002_chrY_T0000665;transcript_name=HG002_chrY_T0000665;gene_name=TSPY9;ID=CDS:HG002_chrY_T0000665:2;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9046494	9046594	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000665;gene_id=HG002_chrY_G0000194;Parent=HG002_chrY_T0000665;transcript_name=HG002_chrY_T0000665;gene_name=TSPY9;ID=intron:HG002_chrY_T0000665:2;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9046595	9046740	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000665;gene_id=HG002_chrY_G0000194;Parent=HG002_chrY_T0000665;transcript_name=HG002_chrY_T0000665;gene_name=TSPY9;ID=exon:HG002_chrY_T0000665:3;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9046595	9046740	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000665;gene_id=HG002_chrY_G0000194;Parent=HG002_chrY_T0000665;transcript_name=HG002_chrY_T0000665;gene_name=TSPY9;ID=CDS:HG002_chrY_T0000665:3;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9046741	9046846	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000665;gene_id=HG002_chrY_G0000194;Parent=HG002_chrY_T0000665;transcript_name=HG002_chrY_T0000665;gene_name=TSPY9;ID=intron:HG002_chrY_T0000665:3;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9046847	9046928	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000665;gene_id=HG002_chrY_G0000194;Parent=HG002_chrY_T0000665;transcript_name=HG002_chrY_T0000665;gene_name=TSPY9;ID=exon:HG002_chrY_T0000665:4;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9046847	9046928	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000665;gene_id=HG002_chrY_G0000194;Parent=HG002_chrY_T0000665;transcript_name=HG002_chrY_T0000665;gene_name=TSPY9;ID=CDS:HG002_chrY_T0000665:4;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9046929	9047622	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000665;gene_id=HG002_chrY_G0000194;Parent=HG002_chrY_T0000665;transcript_name=HG002_chrY_T0000665;gene_name=TSPY9;ID=intron:HG002_chrY_T0000665:4;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9047623	9047833	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000665;gene_id=HG002_chrY_G0000194;Parent=HG002_chrY_T0000665;transcript_name=HG002_chrY_T0000665;gene_name=TSPY9;ID=exon:HG002_chrY_T0000665:5;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9047623	9047645	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000665;gene_id=HG002_chrY_G0000194;Parent=HG002_chrY_T0000665;transcript_name=HG002_chrY_T0000665;gene_name=TSPY9;ID=CDS:HG002_chrY_T0000665:5;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9047643	9047645	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000665;gene_id=HG002_chrY_G0000194;Parent=HG002_chrY_T0000665;transcript_name=HG002_chrY_T0000665;gene_name=TSPY9;ID=stop_codon:HG002_chrY_T0000665;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9055044	9062916	.	-	.	source_gene_common_name=FAM197Y7;source_gene=ENSG00000228383.7_1;gene_id=HG002_chrY_G0000195;gene_biotype=lncRNA;gene_name=FAM197Y7;gene_sources=liftoff;ID=HG002_chrY_G0000195;Name=FAM197Y7
HG002_chrY	CAT	transcript	9055044	9062916	1000	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000666;gene_id=HG002_chrY_G0000195;Parent=HG002_chrY_G0000195;transcript_name=HG002_chrY_T0000666;gene_name=FAM197Y7;ID=HG002_chrY_T0000666;Name=FAM197Y7
HG002_chrY	CAT	exon	9055044	9057157	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000666;gene_id=HG002_chrY_G0000195;Parent=HG002_chrY_T0000666;transcript_name=HG002_chrY_T0000666;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000666:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9057158	9060706	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000666;gene_id=HG002_chrY_G0000195;Parent=HG002_chrY_T0000666;transcript_name=HG002_chrY_T0000666;gene_name=FAM197Y7;ID=intron:HG002_chrY_T0000666:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9060707	9060792	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000666;gene_id=HG002_chrY_G0000195;Parent=HG002_chrY_T0000666;transcript_name=HG002_chrY_T0000666;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000666:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9060793	9062595	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000666;gene_id=HG002_chrY_G0000195;Parent=HG002_chrY_T0000666;transcript_name=HG002_chrY_T0000666;gene_name=FAM197Y7;ID=intron:HG002_chrY_T0000666:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9062596	9062705	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000666;gene_id=HG002_chrY_G0000195;Parent=HG002_chrY_T0000666;transcript_name=HG002_chrY_T0000666;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000666:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9062706	9062901	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000666;gene_id=HG002_chrY_G0000195;Parent=HG002_chrY_T0000666;transcript_name=HG002_chrY_T0000666;gene_name=FAM197Y7;ID=intron:HG002_chrY_T0000666:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9062902	9062916	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000666;gene_id=HG002_chrY_G0000195;Parent=HG002_chrY_T0000666;transcript_name=HG002_chrY_T0000666;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000666:3;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9057098	9062697	1000	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000667;gene_id=HG002_chrY_G0000195;Parent=HG002_chrY_G0000195;transcript_name=HG002_chrY_T0000667;gene_name=FAM197Y7;ID=HG002_chrY_T0000667;Name=FAM197Y7
HG002_chrY	CAT	exon	9057098	9057157	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000667;gene_id=HG002_chrY_G0000195;Parent=HG002_chrY_T0000667;transcript_name=HG002_chrY_T0000667;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000667:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9057158	9060706	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000667;gene_id=HG002_chrY_G0000195;Parent=HG002_chrY_T0000667;transcript_name=HG002_chrY_T0000667;gene_name=FAM197Y7;ID=intron:HG002_chrY_T0000667:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9060707	9060865	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000667;gene_id=HG002_chrY_G0000195;Parent=HG002_chrY_T0000667;transcript_name=HG002_chrY_T0000667;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000667:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9060866	9062363	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000667;gene_id=HG002_chrY_G0000195;Parent=HG002_chrY_T0000667;transcript_name=HG002_chrY_T0000667;gene_name=FAM197Y7;ID=intron:HG002_chrY_T0000667:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9062364	9062509	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000667;gene_id=HG002_chrY_G0000195;Parent=HG002_chrY_T0000667;transcript_name=HG002_chrY_T0000667;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000667:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9062510	9062595	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000667;gene_id=HG002_chrY_G0000195;Parent=HG002_chrY_T0000667;transcript_name=HG002_chrY_T0000667;gene_name=FAM197Y7;ID=intron:HG002_chrY_T0000667:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9062596	9062697	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000667;gene_id=HG002_chrY_G0000195;Parent=HG002_chrY_T0000667;transcript_name=HG002_chrY_T0000667;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000667:3;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9062364	9064356	.	-	.	source_gene_common_name=ENSG00000286120;source_gene=ENSG00000286120.1;gene_id=HG002_chrY_G0000196;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000286120;gene_sources=liftoff;ID=HG002_chrY_G0000196;Name=ENSG00000286120
HG002_chrY	CAT	transcript	9062364	9064356	1000	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG002_chrY_T0000668;gene_id=HG002_chrY_G0000196;Parent=HG002_chrY_G0000196;transcript_name=HG002_chrY_T0000668;gene_name=ENSG00000286120;ID=HG002_chrY_T0000668;Name=ENSG00000286120
HG002_chrY	CAT	exon	9062364	9062509	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG002_chrY_T0000668;gene_id=HG002_chrY_G0000196;Parent=HG002_chrY_T0000668;transcript_name=HG002_chrY_T0000668;gene_name=ENSG00000286120;ID=exon:HG002_chrY_T0000668:0;Name=ENSG00000286120;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9062510	9064045	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG002_chrY_T0000668;gene_id=HG002_chrY_G0000196;Parent=HG002_chrY_T0000668;transcript_name=HG002_chrY_T0000668;gene_name=ENSG00000286120;ID=intron:HG002_chrY_T0000668:0;Name=ENSG00000286120;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9064046	9064356	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG002_chrY_T0000668;gene_id=HG002_chrY_G0000196;Parent=HG002_chrY_T0000668;transcript_name=HG002_chrY_T0000668;gene_name=ENSG00000286120;ID=exon:HG002_chrY_T0000668:1;Name=ENSG00000286120;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9065310	9068106	.	+	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;alternative_source_transcripts=ENST00000457222.6;gene_id=HG002_chrY_G0000197;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=HG002_chrY_G0000197;Name=TSPY3
HG002_chrY	CAT	transcript	9065310	9068106	100	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000669;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_G0000197;transcript_name=HG002_chrY_T0000669;gene_name=TSPY3;ID=HG002_chrY_T0000669;Name=TSPY3
HG002_chrY	CAT	exon	9065310	9065841	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000669;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000669;transcript_name=HG002_chrY_T0000669;gene_name=TSPY3;ID=exon:HG002_chrY_T0000669:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9065356	9065841	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000669;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000669;transcript_name=HG002_chrY_T0000669;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000669:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9065356	9065358	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000669;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000669;transcript_name=HG002_chrY_T0000669;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000669;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9065842	9066448	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000669;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000669;transcript_name=HG002_chrY_T0000669;gene_name=TSPY3;ID=intron:HG002_chrY_T0000669:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9066449	9066526	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000669;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000669;transcript_name=HG002_chrY_T0000669;gene_name=TSPY3;ID=exon:HG002_chrY_T0000669:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9066449	9066526	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000669;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000669;transcript_name=HG002_chrY_T0000669;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000669:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9066527	9066654	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000669;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000669;transcript_name=HG002_chrY_T0000669;gene_name=TSPY3;ID=intron:HG002_chrY_T0000669:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9066655	9066766	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000669;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000669;transcript_name=HG002_chrY_T0000669;gene_name=TSPY3;ID=exon:HG002_chrY_T0000669:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9066655	9066766	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000669;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000669;transcript_name=HG002_chrY_T0000669;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000669:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9066767	9066867	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000669;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000669;transcript_name=HG002_chrY_T0000669;gene_name=TSPY3;ID=intron:HG002_chrY_T0000669:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9066868	9067013	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000669;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000669;transcript_name=HG002_chrY_T0000669;gene_name=TSPY3;ID=exon:HG002_chrY_T0000669:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9066868	9067013	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000669;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000669;transcript_name=HG002_chrY_T0000669;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000669:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9067014	9067119	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000669;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000669;transcript_name=HG002_chrY_T0000669;gene_name=TSPY3;ID=intron:HG002_chrY_T0000669:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9067120	9067201	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000669;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000669;transcript_name=HG002_chrY_T0000669;gene_name=TSPY3;ID=exon:HG002_chrY_T0000669:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9067120	9067201	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000669;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000669;transcript_name=HG002_chrY_T0000669;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000669:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9067202	9067895	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000669;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000669;transcript_name=HG002_chrY_T0000669;gene_name=TSPY3;ID=intron:HG002_chrY_T0000669:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9067896	9068106	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000669;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000669;transcript_name=HG002_chrY_T0000669;gene_name=TSPY3;ID=exon:HG002_chrY_T0000669:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9067896	9067918	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000669;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000669;transcript_name=HG002_chrY_T0000669;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000669:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9067916	9067918	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000669;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000669;transcript_name=HG002_chrY_T0000669;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000669;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9065356	9068105	100	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000670;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_G0000197;transcript_name=HG002_chrY_T0000670;gene_name=TSPY3;ID=HG002_chrY_T0000670;Name=TSPY3
HG002_chrY	CAT	exon	9065356	9065841	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000670;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000670;transcript_name=HG002_chrY_T0000670;gene_name=TSPY3;ID=exon:HG002_chrY_T0000670:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9065356	9065841	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000670;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000670;transcript_name=HG002_chrY_T0000670;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000670:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9065356	9065358	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000670;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000670;transcript_name=HG002_chrY_T0000670;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000670;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9065842	9066448	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000670;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000670;transcript_name=HG002_chrY_T0000670;gene_name=TSPY3;ID=intron:HG002_chrY_T0000670:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9066449	9066526	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000670;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000670;transcript_name=HG002_chrY_T0000670;gene_name=TSPY3;ID=exon:HG002_chrY_T0000670:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9066449	9066526	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000670;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000670;transcript_name=HG002_chrY_T0000670;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000670:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9066527	9066654	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000670;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000670;transcript_name=HG002_chrY_T0000670;gene_name=TSPY3;ID=intron:HG002_chrY_T0000670:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9066655	9066766	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000670;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000670;transcript_name=HG002_chrY_T0000670;gene_name=TSPY3;ID=exon:HG002_chrY_T0000670:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9066655	9066766	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000670;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000670;transcript_name=HG002_chrY_T0000670;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000670:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9066767	9066867	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000670;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000670;transcript_name=HG002_chrY_T0000670;gene_name=TSPY3;ID=intron:HG002_chrY_T0000670:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9066868	9067013	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000670;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000670;transcript_name=HG002_chrY_T0000670;gene_name=TSPY3;ID=exon:HG002_chrY_T0000670:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9066868	9067013	.	+	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000670;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000670;transcript_name=HG002_chrY_T0000670;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000670:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9067014	9067108	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000670;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000670;transcript_name=HG002_chrY_T0000670;gene_name=TSPY3;ID=intron:HG002_chrY_T0000670:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9067109	9067201	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000670;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000670;transcript_name=HG002_chrY_T0000670;gene_name=TSPY3;ID=exon:HG002_chrY_T0000670:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9067109	9067171	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000670;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000670;transcript_name=HG002_chrY_T0000670;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000670:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9067169	9067171	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000670;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000670;transcript_name=HG002_chrY_T0000670;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000670;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9067202	9067895	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000670;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000670;transcript_name=HG002_chrY_T0000670;gene_name=TSPY3;ID=intron:HG002_chrY_T0000670:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9067896	9068105	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000670;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000670;transcript_name=HG002_chrY_T0000670;gene_name=TSPY3;ID=exon:HG002_chrY_T0000670:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9065356	9067918	100	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000671;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_G0000197;transcript_name=HG002_chrY_T0000671;gene_name=TSPY3;ID=HG002_chrY_T0000671;Name=TSPY3
HG002_chrY	CAT	exon	9065356	9065442	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000671;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000671;transcript_name=HG002_chrY_T0000671;gene_name=TSPY3;ID=exon:HG002_chrY_T0000671:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9065356	9065442	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000671;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000671;transcript_name=HG002_chrY_T0000671;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000671:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9065356	9065358	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000671;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000671;transcript_name=HG002_chrY_T0000671;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000671;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9065443	9065703	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000671;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000671;transcript_name=HG002_chrY_T0000671;gene_name=TSPY3;ID=intron:HG002_chrY_T0000671:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9065704	9065841	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000671;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000671;transcript_name=HG002_chrY_T0000671;gene_name=TSPY3;ID=exon:HG002_chrY_T0000671:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9065704	9065841	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000671;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000671;transcript_name=HG002_chrY_T0000671;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000671:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9065842	9066448	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000671;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000671;transcript_name=HG002_chrY_T0000671;gene_name=TSPY3;ID=intron:HG002_chrY_T0000671:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9066449	9066526	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000671;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000671;transcript_name=HG002_chrY_T0000671;gene_name=TSPY3;ID=exon:HG002_chrY_T0000671:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9066449	9066526	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000671;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000671;transcript_name=HG002_chrY_T0000671;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000671:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9066527	9066654	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000671;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000671;transcript_name=HG002_chrY_T0000671;gene_name=TSPY3;ID=intron:HG002_chrY_T0000671:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9066655	9066766	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000671;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000671;transcript_name=HG002_chrY_T0000671;gene_name=TSPY3;ID=exon:HG002_chrY_T0000671:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9066655	9066766	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000671;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000671;transcript_name=HG002_chrY_T0000671;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000671:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9066767	9066867	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000671;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000671;transcript_name=HG002_chrY_T0000671;gene_name=TSPY3;ID=intron:HG002_chrY_T0000671:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9066868	9067013	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000671;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000671;transcript_name=HG002_chrY_T0000671;gene_name=TSPY3;ID=exon:HG002_chrY_T0000671:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9066868	9067013	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000671;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000671;transcript_name=HG002_chrY_T0000671;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000671:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9067014	9067119	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000671;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000671;transcript_name=HG002_chrY_T0000671;gene_name=TSPY3;ID=intron:HG002_chrY_T0000671:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9067120	9067201	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000671;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000671;transcript_name=HG002_chrY_T0000671;gene_name=TSPY3;ID=exon:HG002_chrY_T0000671:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9067120	9067201	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000671;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000671;transcript_name=HG002_chrY_T0000671;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000671:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9067202	9067895	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000671;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000671;transcript_name=HG002_chrY_T0000671;gene_name=TSPY3;ID=intron:HG002_chrY_T0000671:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9067896	9067918	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000671;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000671;transcript_name=HG002_chrY_T0000671;gene_name=TSPY3;ID=exon:HG002_chrY_T0000671:6;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9067896	9067918	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000671;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000671;transcript_name=HG002_chrY_T0000671;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000671:6;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9067916	9067918	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000671;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000671;transcript_name=HG002_chrY_T0000671;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000671;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9065356	9068112	1000	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG002_chrY_T0000672;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_G0000197;transcript_name=HG002_chrY_T0000672;gene_name=TSPY3;ID=HG002_chrY_T0000672;Name=TSPY3
HG002_chrY	CAT	exon	9065356	9065841	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG002_chrY_T0000672;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000672;transcript_name=HG002_chrY_T0000672;gene_name=TSPY3;ID=exon:HG002_chrY_T0000672:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9065842	9066448	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG002_chrY_T0000672;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000672;transcript_name=HG002_chrY_T0000672;gene_name=TSPY3;ID=intron:HG002_chrY_T0000672:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9066449	9066526	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG002_chrY_T0000672;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000672;transcript_name=HG002_chrY_T0000672;gene_name=TSPY3;ID=exon:HG002_chrY_T0000672:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9066527	9066654	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG002_chrY_T0000672;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000672;transcript_name=HG002_chrY_T0000672;gene_name=TSPY3;ID=intron:HG002_chrY_T0000672:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9066655	9067201	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG002_chrY_T0000672;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000672;transcript_name=HG002_chrY_T0000672;gene_name=TSPY3;ID=exon:HG002_chrY_T0000672:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9067202	9067328	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG002_chrY_T0000672;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000672;transcript_name=HG002_chrY_T0000672;gene_name=TSPY3;ID=intron:HG002_chrY_T0000672:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9067329	9068112	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG002_chrY_T0000672;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000672;transcript_name=HG002_chrY_T0000672;gene_name=TSPY3;ID=exon:HG002_chrY_T0000672:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9066716	9068097	1000	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=HG002_chrY_T0000673;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_G0000197;transcript_name=HG002_chrY_T0000673;gene_name=TSPY3;ID=HG002_chrY_T0000673;Name=TSPY3
HG002_chrY	CAT	exon	9066716	9067013	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=HG002_chrY_T0000673;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000673;transcript_name=HG002_chrY_T0000673;gene_name=TSPY3;ID=exon:HG002_chrY_T0000673:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9067014	9067108	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=HG002_chrY_T0000673;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000673;transcript_name=HG002_chrY_T0000673;gene_name=TSPY3;ID=intron:HG002_chrY_T0000673:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9067109	9067201	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=HG002_chrY_T0000673;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000673;transcript_name=HG002_chrY_T0000673;gene_name=TSPY3;ID=exon:HG002_chrY_T0000673:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9067202	9067895	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=HG002_chrY_T0000673;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000673;transcript_name=HG002_chrY_T0000673;gene_name=TSPY3;ID=intron:HG002_chrY_T0000673:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9067896	9068097	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=HG002_chrY_T0000673;gene_id=HG002_chrY_G0000197;Parent=HG002_chrY_T0000673;transcript_name=HG002_chrY_T0000673;gene_name=TSPY3;ID=exon:HG002_chrY_T0000673:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9077230	9082971	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=HG002_chrY_G0000198;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000198;Name=FAM197Y5
HG002_chrY	CAT	transcript	9077230	9082971	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000674;gene_id=HG002_chrY_G0000198;Parent=HG002_chrY_G0000198;transcript_name=HG002_chrY_T0000674;gene_name=FAM197Y5;ID=HG002_chrY_T0000674;Name=FAM197Y5
HG002_chrY	CAT	exon	9077230	9077419	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000674;gene_id=HG002_chrY_G0000198;Parent=HG002_chrY_T0000674;transcript_name=HG002_chrY_T0000674;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000674:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9077420	9080968	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000674;gene_id=HG002_chrY_G0000198;Parent=HG002_chrY_T0000674;transcript_name=HG002_chrY_T0000674;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000674:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9080969	9081054	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000674;gene_id=HG002_chrY_G0000198;Parent=HG002_chrY_T0000674;transcript_name=HG002_chrY_T0000674;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000674:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9081055	9082857	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000674;gene_id=HG002_chrY_G0000198;Parent=HG002_chrY_T0000674;transcript_name=HG002_chrY_T0000674;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000674:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9082858	9082971	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000674;gene_id=HG002_chrY_G0000198;Parent=HG002_chrY_T0000674;transcript_name=HG002_chrY_T0000674;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000674:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9077360	9082959	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000675;gene_id=HG002_chrY_G0000198;Parent=HG002_chrY_G0000198;transcript_name=HG002_chrY_T0000675;gene_name=FAM197Y5;ID=HG002_chrY_T0000675;Name=FAM197Y5
HG002_chrY	CAT	exon	9077360	9077419	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000675;gene_id=HG002_chrY_G0000198;Parent=HG002_chrY_T0000675;transcript_name=HG002_chrY_T0000675;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000675:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9077420	9080968	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000675;gene_id=HG002_chrY_G0000198;Parent=HG002_chrY_T0000675;transcript_name=HG002_chrY_T0000675;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000675:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9080969	9081127	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000675;gene_id=HG002_chrY_G0000198;Parent=HG002_chrY_T0000675;transcript_name=HG002_chrY_T0000675;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000675:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9081128	9082625	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000675;gene_id=HG002_chrY_G0000198;Parent=HG002_chrY_T0000675;transcript_name=HG002_chrY_T0000675;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000675:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9082626	9082771	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000675;gene_id=HG002_chrY_G0000198;Parent=HG002_chrY_T0000675;transcript_name=HG002_chrY_T0000675;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000675:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9082772	9082857	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000675;gene_id=HG002_chrY_G0000198;Parent=HG002_chrY_T0000675;transcript_name=HG002_chrY_T0000675;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000675:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9082858	9082959	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000675;gene_id=HG002_chrY_G0000198;Parent=HG002_chrY_T0000675;transcript_name=HG002_chrY_T0000675;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000675:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9082626	9084618	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_3;gene_id=HG002_chrY_G0000199;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000199;Name=FAM197Y5
HG002_chrY	CAT	transcript	9082626	9084618	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000676;gene_id=HG002_chrY_G0000199;Parent=HG002_chrY_G0000199;transcript_name=HG002_chrY_T0000676;gene_name=FAM197Y5;ID=HG002_chrY_T0000676;Name=FAM197Y5
HG002_chrY	CAT	exon	9082626	9082771	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000676;gene_id=HG002_chrY_G0000199;Parent=HG002_chrY_T0000676;transcript_name=HG002_chrY_T0000676;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000676:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9082772	9084307	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000676;gene_id=HG002_chrY_G0000199;Parent=HG002_chrY_T0000676;transcript_name=HG002_chrY_T0000676;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000676:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9084308	9084618	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000676;gene_id=HG002_chrY_G0000199;Parent=HG002_chrY_T0000676;transcript_name=HG002_chrY_T0000676;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000676:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9085572	9088368	.	+	.	source_gene_common_name=TSPY10;source_gene=ENSG00000236424.7;gene_id=HG002_chrY_G0000200;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG002_chrY_G0000200;Name=TSPY10
HG002_chrY	CAT	transcript	9085572	9088368	100	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000677;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_G0000200;transcript_name=HG002_chrY_T0000677;gene_name=TSPY10;ID=HG002_chrY_T0000677;Name=TSPY10
HG002_chrY	CAT	exon	9085572	9086103	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000677;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000677;transcript_name=HG002_chrY_T0000677;gene_name=TSPY10;ID=exon:HG002_chrY_T0000677:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9085618	9086103	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000677;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000677;transcript_name=HG002_chrY_T0000677;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000677:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9085618	9085620	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000677;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000677;transcript_name=HG002_chrY_T0000677;gene_name=TSPY10;ID=start_codon:HG002_chrY_T0000677;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9086104	9086710	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000677;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000677;transcript_name=HG002_chrY_T0000677;gene_name=TSPY10;ID=intron:HG002_chrY_T0000677:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9086711	9086788	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000677;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000677;transcript_name=HG002_chrY_T0000677;gene_name=TSPY10;ID=exon:HG002_chrY_T0000677:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9086711	9086788	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000677;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000677;transcript_name=HG002_chrY_T0000677;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000677:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9086789	9086916	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000677;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000677;transcript_name=HG002_chrY_T0000677;gene_name=TSPY10;ID=intron:HG002_chrY_T0000677:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9086917	9087028	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000677;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000677;transcript_name=HG002_chrY_T0000677;gene_name=TSPY10;ID=exon:HG002_chrY_T0000677:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9086917	9087028	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000677;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000677;transcript_name=HG002_chrY_T0000677;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000677:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9087029	9087129	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000677;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000677;transcript_name=HG002_chrY_T0000677;gene_name=TSPY10;ID=intron:HG002_chrY_T0000677:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9087130	9087275	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000677;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000677;transcript_name=HG002_chrY_T0000677;gene_name=TSPY10;ID=exon:HG002_chrY_T0000677:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9087130	9087275	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000677;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000677;transcript_name=HG002_chrY_T0000677;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000677:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9087276	9087381	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000677;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000677;transcript_name=HG002_chrY_T0000677;gene_name=TSPY10;ID=intron:HG002_chrY_T0000677:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9087382	9087463	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000677;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000677;transcript_name=HG002_chrY_T0000677;gene_name=TSPY10;ID=exon:HG002_chrY_T0000677:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9087382	9087463	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000677;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000677;transcript_name=HG002_chrY_T0000677;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000677:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9087464	9088157	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000677;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000677;transcript_name=HG002_chrY_T0000677;gene_name=TSPY10;ID=intron:HG002_chrY_T0000677:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9088158	9088368	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000677;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000677;transcript_name=HG002_chrY_T0000677;gene_name=TSPY10;ID=exon:HG002_chrY_T0000677:5;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9088158	9088180	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000677;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000677;transcript_name=HG002_chrY_T0000677;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000677:5;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9088178	9088180	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000677;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000677;transcript_name=HG002_chrY_T0000677;gene_name=TSPY10;ID=stop_codon:HG002_chrY_T0000677;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9085618	9088367	100	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000678;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_G0000200;transcript_name=HG002_chrY_T0000678;gene_name=TSPY10;ID=HG002_chrY_T0000678;Name=TSPY10
HG002_chrY	CAT	exon	9085618	9086103	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000678;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000678;transcript_name=HG002_chrY_T0000678;gene_name=TSPY10;ID=exon:HG002_chrY_T0000678:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9085618	9086103	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000678;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000678;transcript_name=HG002_chrY_T0000678;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000678:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9085618	9085620	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000678;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000678;transcript_name=HG002_chrY_T0000678;gene_name=TSPY10;ID=start_codon:HG002_chrY_T0000678;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9086104	9086710	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000678;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000678;transcript_name=HG002_chrY_T0000678;gene_name=TSPY10;ID=intron:HG002_chrY_T0000678:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9086711	9086788	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000678;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000678;transcript_name=HG002_chrY_T0000678;gene_name=TSPY10;ID=exon:HG002_chrY_T0000678:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9086711	9086788	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000678;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000678;transcript_name=HG002_chrY_T0000678;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000678:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9086789	9086916	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000678;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000678;transcript_name=HG002_chrY_T0000678;gene_name=TSPY10;ID=intron:HG002_chrY_T0000678:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9086917	9087028	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000678;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000678;transcript_name=HG002_chrY_T0000678;gene_name=TSPY10;ID=exon:HG002_chrY_T0000678:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9086917	9087028	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000678;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000678;transcript_name=HG002_chrY_T0000678;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000678:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9087029	9087129	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000678;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000678;transcript_name=HG002_chrY_T0000678;gene_name=TSPY10;ID=intron:HG002_chrY_T0000678:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9087130	9087275	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000678;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000678;transcript_name=HG002_chrY_T0000678;gene_name=TSPY10;ID=exon:HG002_chrY_T0000678:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9087130	9087275	.	+	2	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000678;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000678;transcript_name=HG002_chrY_T0000678;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000678:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9087276	9087370	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000678;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000678;transcript_name=HG002_chrY_T0000678;gene_name=TSPY10;ID=intron:HG002_chrY_T0000678:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9087371	9087463	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000678;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000678;transcript_name=HG002_chrY_T0000678;gene_name=TSPY10;ID=exon:HG002_chrY_T0000678:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9087371	9087433	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000678;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000678;transcript_name=HG002_chrY_T0000678;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000678:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9087431	9087433	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000678;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000678;transcript_name=HG002_chrY_T0000678;gene_name=TSPY10;ID=stop_codon:HG002_chrY_T0000678;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9087464	9088157	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000678;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000678;transcript_name=HG002_chrY_T0000678;gene_name=TSPY10;ID=intron:HG002_chrY_T0000678:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9088158	9088367	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000678;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000678;transcript_name=HG002_chrY_T0000678;gene_name=TSPY10;ID=exon:HG002_chrY_T0000678:5;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9085618	9088374	1000	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000679;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_G0000200;transcript_name=HG002_chrY_T0000679;gene_name=TSPY10;ID=HG002_chrY_T0000679;Name=TSPY10
HG002_chrY	CAT	exon	9085618	9086103	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000679;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000679;transcript_name=HG002_chrY_T0000679;gene_name=TSPY10;ID=exon:HG002_chrY_T0000679:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9086104	9086710	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000679;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000679;transcript_name=HG002_chrY_T0000679;gene_name=TSPY10;ID=intron:HG002_chrY_T0000679:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9086711	9086788	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000679;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000679;transcript_name=HG002_chrY_T0000679;gene_name=TSPY10;ID=exon:HG002_chrY_T0000679:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9086789	9086916	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000679;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000679;transcript_name=HG002_chrY_T0000679;gene_name=TSPY10;ID=intron:HG002_chrY_T0000679:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9086917	9087463	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000679;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000679;transcript_name=HG002_chrY_T0000679;gene_name=TSPY10;ID=exon:HG002_chrY_T0000679:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9087464	9087590	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000679;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000679;transcript_name=HG002_chrY_T0000679;gene_name=TSPY10;ID=intron:HG002_chrY_T0000679:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9087591	9088374	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000679;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000679;transcript_name=HG002_chrY_T0000679;gene_name=TSPY10;ID=exon:HG002_chrY_T0000679:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9086978	9088359	1000	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000680;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_G0000200;transcript_name=HG002_chrY_T0000680;gene_name=TSPY10;ID=HG002_chrY_T0000680;Name=TSPY10
HG002_chrY	CAT	exon	9086978	9087275	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000680;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000680;transcript_name=HG002_chrY_T0000680;gene_name=TSPY10;ID=exon:HG002_chrY_T0000680:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9087276	9087381	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000680;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000680;transcript_name=HG002_chrY_T0000680;gene_name=TSPY10;ID=intron:HG002_chrY_T0000680:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9087382	9087463	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000680;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000680;transcript_name=HG002_chrY_T0000680;gene_name=TSPY10;ID=exon:HG002_chrY_T0000680:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9087464	9088157	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000680;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000680;transcript_name=HG002_chrY_T0000680;gene_name=TSPY10;ID=intron:HG002_chrY_T0000680:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9088158	9088359	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000680;gene_id=HG002_chrY_G0000200;Parent=HG002_chrY_T0000680;transcript_name=HG002_chrY_T0000680;gene_name=TSPY10;ID=exon:HG002_chrY_T0000680:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9095573	9103458	.	-	.	source_gene_common_name=FAM197Y7;source_gene=ENSG00000228383.7_2;gene_id=HG002_chrY_G0000201;gene_biotype=lncRNA;gene_name=FAM197Y7;gene_sources=liftoff;ID=HG002_chrY_G0000201;Name=FAM197Y7
HG002_chrY	CAT	transcript	9095573	9103458	1000	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000681;gene_id=HG002_chrY_G0000201;Parent=HG002_chrY_G0000201;transcript_name=HG002_chrY_T0000681;gene_name=FAM197Y7;ID=HG002_chrY_T0000681;Name=FAM197Y7
HG002_chrY	CAT	exon	9095573	9097697	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000681;gene_id=HG002_chrY_G0000201;Parent=HG002_chrY_T0000681;transcript_name=HG002_chrY_T0000681;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000681:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9097698	9101248	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000681;gene_id=HG002_chrY_G0000201;Parent=HG002_chrY_T0000681;transcript_name=HG002_chrY_T0000681;gene_name=FAM197Y7;ID=intron:HG002_chrY_T0000681:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9101249	9101334	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000681;gene_id=HG002_chrY_G0000201;Parent=HG002_chrY_T0000681;transcript_name=HG002_chrY_T0000681;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000681:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9101335	9103137	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000681;gene_id=HG002_chrY_G0000201;Parent=HG002_chrY_T0000681;transcript_name=HG002_chrY_T0000681;gene_name=FAM197Y7;ID=intron:HG002_chrY_T0000681:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9103138	9103247	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000681;gene_id=HG002_chrY_G0000201;Parent=HG002_chrY_T0000681;transcript_name=HG002_chrY_T0000681;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000681:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9103248	9103443	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000681;gene_id=HG002_chrY_G0000201;Parent=HG002_chrY_T0000681;transcript_name=HG002_chrY_T0000681;gene_name=FAM197Y7;ID=intron:HG002_chrY_T0000681:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9103444	9103458	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000681;gene_id=HG002_chrY_G0000201;Parent=HG002_chrY_T0000681;transcript_name=HG002_chrY_T0000681;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000681:3;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9097638	9103239	1000	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000682;gene_id=HG002_chrY_G0000201;Parent=HG002_chrY_G0000201;transcript_name=HG002_chrY_T0000682;gene_name=FAM197Y7;ID=HG002_chrY_T0000682;Name=FAM197Y7
HG002_chrY	CAT	exon	9097638	9097697	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000682;gene_id=HG002_chrY_G0000201;Parent=HG002_chrY_T0000682;transcript_name=HG002_chrY_T0000682;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000682:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9097698	9101248	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000682;gene_id=HG002_chrY_G0000201;Parent=HG002_chrY_T0000682;transcript_name=HG002_chrY_T0000682;gene_name=FAM197Y7;ID=intron:HG002_chrY_T0000682:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9101249	9101407	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000682;gene_id=HG002_chrY_G0000201;Parent=HG002_chrY_T0000682;transcript_name=HG002_chrY_T0000682;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000682:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9101408	9102905	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000682;gene_id=HG002_chrY_G0000201;Parent=HG002_chrY_T0000682;transcript_name=HG002_chrY_T0000682;gene_name=FAM197Y7;ID=intron:HG002_chrY_T0000682:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9102906	9103051	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000682;gene_id=HG002_chrY_G0000201;Parent=HG002_chrY_T0000682;transcript_name=HG002_chrY_T0000682;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000682:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9103052	9103137	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000682;gene_id=HG002_chrY_G0000201;Parent=HG002_chrY_T0000682;transcript_name=HG002_chrY_T0000682;gene_name=FAM197Y7;ID=intron:HG002_chrY_T0000682:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9103138	9103239	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000682;gene_id=HG002_chrY_G0000201;Parent=HG002_chrY_T0000682;transcript_name=HG002_chrY_T0000682;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000682:3;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9102906	9104898	.	-	.	source_gene_common_name=ENSG00000286120;source_gene=ENSG00000286120.1_2;gene_id=HG002_chrY_G0000202;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000286120;gene_sources=liftoff;ID=HG002_chrY_G0000202;Name=ENSG00000286120
HG002_chrY	CAT	transcript	9102906	9104898	1000	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG002_chrY_T0000683;gene_id=HG002_chrY_G0000202;Parent=HG002_chrY_G0000202;transcript_name=HG002_chrY_T0000683;gene_name=ENSG00000286120;ID=HG002_chrY_T0000683;Name=ENSG00000286120
HG002_chrY	CAT	exon	9102906	9103051	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG002_chrY_T0000683;gene_id=HG002_chrY_G0000202;Parent=HG002_chrY_T0000683;transcript_name=HG002_chrY_T0000683;gene_name=ENSG00000286120;ID=exon:HG002_chrY_T0000683:0;Name=ENSG00000286120;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9103052	9104587	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG002_chrY_T0000683;gene_id=HG002_chrY_G0000202;Parent=HG002_chrY_T0000683;transcript_name=HG002_chrY_T0000683;gene_name=ENSG00000286120;ID=intron:HG002_chrY_T0000683:0;Name=ENSG00000286120;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9104588	9104898	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG002_chrY_T0000683;gene_id=HG002_chrY_G0000202;Parent=HG002_chrY_T0000683;transcript_name=HG002_chrY_T0000683;gene_name=ENSG00000286120;ID=exon:HG002_chrY_T0000683:1;Name=ENSG00000286120;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9105852	9108648	.	+	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;gene_id=HG002_chrY_G0000203;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=HG002_chrY_G0000203;Name=TSPY3
HG002_chrY	CAT	transcript	9105852	9108648	100	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000684;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_G0000203;transcript_name=HG002_chrY_T0000684;gene_name=TSPY3;ID=HG002_chrY_T0000684;Name=TSPY3
HG002_chrY	CAT	exon	9105852	9106383	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000684;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000684;transcript_name=HG002_chrY_T0000684;gene_name=TSPY3;ID=exon:HG002_chrY_T0000684:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9105898	9106383	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000684;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000684;transcript_name=HG002_chrY_T0000684;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000684:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9105898	9105900	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000684;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000684;transcript_name=HG002_chrY_T0000684;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000684;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9106384	9106990	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000684;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000684;transcript_name=HG002_chrY_T0000684;gene_name=TSPY3;ID=intron:HG002_chrY_T0000684:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9106991	9107068	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000684;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000684;transcript_name=HG002_chrY_T0000684;gene_name=TSPY3;ID=exon:HG002_chrY_T0000684:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9106991	9107068	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000684;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000684;transcript_name=HG002_chrY_T0000684;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000684:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9107069	9107196	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000684;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000684;transcript_name=HG002_chrY_T0000684;gene_name=TSPY3;ID=intron:HG002_chrY_T0000684:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9107197	9107308	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000684;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000684;transcript_name=HG002_chrY_T0000684;gene_name=TSPY3;ID=exon:HG002_chrY_T0000684:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9107197	9107308	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000684;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000684;transcript_name=HG002_chrY_T0000684;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000684:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9107309	9107409	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000684;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000684;transcript_name=HG002_chrY_T0000684;gene_name=TSPY3;ID=intron:HG002_chrY_T0000684:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9107410	9107555	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000684;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000684;transcript_name=HG002_chrY_T0000684;gene_name=TSPY3;ID=exon:HG002_chrY_T0000684:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9107410	9107555	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000684;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000684;transcript_name=HG002_chrY_T0000684;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000684:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9107556	9107661	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000684;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000684;transcript_name=HG002_chrY_T0000684;gene_name=TSPY3;ID=intron:HG002_chrY_T0000684:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9107662	9107743	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000684;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000684;transcript_name=HG002_chrY_T0000684;gene_name=TSPY3;ID=exon:HG002_chrY_T0000684:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9107662	9107743	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000684;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000684;transcript_name=HG002_chrY_T0000684;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000684:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9107744	9108437	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000684;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000684;transcript_name=HG002_chrY_T0000684;gene_name=TSPY3;ID=intron:HG002_chrY_T0000684:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9108438	9108648	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000684;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000684;transcript_name=HG002_chrY_T0000684;gene_name=TSPY3;ID=exon:HG002_chrY_T0000684:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9108438	9108460	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000684;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000684;transcript_name=HG002_chrY_T0000684;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000684:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9108458	9108460	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000684;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000684;transcript_name=HG002_chrY_T0000684;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000684;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9105898	9108460	100	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000685;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_G0000203;transcript_name=HG002_chrY_T0000685;gene_name=TSPY3;ID=HG002_chrY_T0000685;Name=TSPY3
HG002_chrY	CAT	exon	9105898	9105984	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000685;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000685;transcript_name=HG002_chrY_T0000685;gene_name=TSPY3;ID=exon:HG002_chrY_T0000685:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9105898	9105984	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000685;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000685;transcript_name=HG002_chrY_T0000685;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000685:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9105898	9105900	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000685;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000685;transcript_name=HG002_chrY_T0000685;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000685;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9105985	9106245	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000685;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000685;transcript_name=HG002_chrY_T0000685;gene_name=TSPY3;ID=intron:HG002_chrY_T0000685:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9106246	9106383	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000685;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000685;transcript_name=HG002_chrY_T0000685;gene_name=TSPY3;ID=exon:HG002_chrY_T0000685:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9106246	9106383	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000685;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000685;transcript_name=HG002_chrY_T0000685;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000685:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9106384	9106990	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000685;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000685;transcript_name=HG002_chrY_T0000685;gene_name=TSPY3;ID=intron:HG002_chrY_T0000685:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9106991	9107068	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000685;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000685;transcript_name=HG002_chrY_T0000685;gene_name=TSPY3;ID=exon:HG002_chrY_T0000685:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9106991	9107068	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000685;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000685;transcript_name=HG002_chrY_T0000685;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000685:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9107069	9107196	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000685;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000685;transcript_name=HG002_chrY_T0000685;gene_name=TSPY3;ID=intron:HG002_chrY_T0000685:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9107197	9107308	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000685;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000685;transcript_name=HG002_chrY_T0000685;gene_name=TSPY3;ID=exon:HG002_chrY_T0000685:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9107197	9107308	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000685;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000685;transcript_name=HG002_chrY_T0000685;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000685:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9107309	9107409	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000685;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000685;transcript_name=HG002_chrY_T0000685;gene_name=TSPY3;ID=intron:HG002_chrY_T0000685:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9107410	9107555	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000685;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000685;transcript_name=HG002_chrY_T0000685;gene_name=TSPY3;ID=exon:HG002_chrY_T0000685:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9107410	9107555	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000685;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000685;transcript_name=HG002_chrY_T0000685;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000685:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9107556	9107661	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000685;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000685;transcript_name=HG002_chrY_T0000685;gene_name=TSPY3;ID=intron:HG002_chrY_T0000685:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9107662	9107743	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000685;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000685;transcript_name=HG002_chrY_T0000685;gene_name=TSPY3;ID=exon:HG002_chrY_T0000685:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9107662	9107743	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000685;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000685;transcript_name=HG002_chrY_T0000685;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000685:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9107744	9108437	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000685;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000685;transcript_name=HG002_chrY_T0000685;gene_name=TSPY3;ID=intron:HG002_chrY_T0000685:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9108438	9108460	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000685;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000685;transcript_name=HG002_chrY_T0000685;gene_name=TSPY3;ID=exon:HG002_chrY_T0000685:6;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9108438	9108460	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000685;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000685;transcript_name=HG002_chrY_T0000685;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000685:6;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9108458	9108460	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000685;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000685;transcript_name=HG002_chrY_T0000685;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000685;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9105898	9108647	100	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000686;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_G0000203;transcript_name=HG002_chrY_T0000686;gene_name=TSPY3;ID=HG002_chrY_T0000686;Name=TSPY3
HG002_chrY	CAT	exon	9105898	9106383	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000686;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000686;transcript_name=HG002_chrY_T0000686;gene_name=TSPY3;ID=exon:HG002_chrY_T0000686:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9105898	9106383	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000686;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000686;transcript_name=HG002_chrY_T0000686;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000686:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9105898	9105900	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000686;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000686;transcript_name=HG002_chrY_T0000686;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000686;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9106384	9106990	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000686;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000686;transcript_name=HG002_chrY_T0000686;gene_name=TSPY3;ID=intron:HG002_chrY_T0000686:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9106991	9107068	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000686;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000686;transcript_name=HG002_chrY_T0000686;gene_name=TSPY3;ID=exon:HG002_chrY_T0000686:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9106991	9107068	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000686;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000686;transcript_name=HG002_chrY_T0000686;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000686:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9107069	9107196	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000686;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000686;transcript_name=HG002_chrY_T0000686;gene_name=TSPY3;ID=intron:HG002_chrY_T0000686:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9107197	9107308	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000686;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000686;transcript_name=HG002_chrY_T0000686;gene_name=TSPY3;ID=exon:HG002_chrY_T0000686:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9107197	9107308	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000686;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000686;transcript_name=HG002_chrY_T0000686;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000686:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9107309	9107409	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000686;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000686;transcript_name=HG002_chrY_T0000686;gene_name=TSPY3;ID=intron:HG002_chrY_T0000686:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9107410	9107555	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000686;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000686;transcript_name=HG002_chrY_T0000686;gene_name=TSPY3;ID=exon:HG002_chrY_T0000686:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9107410	9107555	.	+	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000686;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000686;transcript_name=HG002_chrY_T0000686;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000686:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9107556	9107650	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000686;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000686;transcript_name=HG002_chrY_T0000686;gene_name=TSPY3;ID=intron:HG002_chrY_T0000686:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9107651	9107743	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000686;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000686;transcript_name=HG002_chrY_T0000686;gene_name=TSPY3;ID=exon:HG002_chrY_T0000686:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9107651	9107713	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000686;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000686;transcript_name=HG002_chrY_T0000686;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000686:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9107711	9107713	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000686;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000686;transcript_name=HG002_chrY_T0000686;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000686;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9107744	9108437	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000686;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000686;transcript_name=HG002_chrY_T0000686;gene_name=TSPY3;ID=intron:HG002_chrY_T0000686:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9108438	9108647	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000686;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000686;transcript_name=HG002_chrY_T0000686;gene_name=TSPY3;ID=exon:HG002_chrY_T0000686:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9105898	9108654	1000	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000687;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_G0000203;transcript_name=HG002_chrY_T0000687;gene_name=TSPY3;ID=HG002_chrY_T0000687;Name=TSPY3
HG002_chrY	CAT	exon	9105898	9106383	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000687;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000687;transcript_name=HG002_chrY_T0000687;gene_name=TSPY3;ID=exon:HG002_chrY_T0000687:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9106384	9106990	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000687;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000687;transcript_name=HG002_chrY_T0000687;gene_name=TSPY3;ID=intron:HG002_chrY_T0000687:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9106991	9107068	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000687;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000687;transcript_name=HG002_chrY_T0000687;gene_name=TSPY3;ID=exon:HG002_chrY_T0000687:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9107069	9107196	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000687;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000687;transcript_name=HG002_chrY_T0000687;gene_name=TSPY3;ID=intron:HG002_chrY_T0000687:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9107197	9107743	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000687;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000687;transcript_name=HG002_chrY_T0000687;gene_name=TSPY3;ID=exon:HG002_chrY_T0000687:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9107744	9107870	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000687;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000687;transcript_name=HG002_chrY_T0000687;gene_name=TSPY3;ID=intron:HG002_chrY_T0000687:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9107871	9108654	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000687;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000687;transcript_name=HG002_chrY_T0000687;gene_name=TSPY3;ID=exon:HG002_chrY_T0000687:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9107258	9108639	1000	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000688;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_G0000203;transcript_name=HG002_chrY_T0000688;gene_name=TSPY3;ID=HG002_chrY_T0000688;Name=TSPY3
HG002_chrY	CAT	exon	9107258	9107555	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000688;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000688;transcript_name=HG002_chrY_T0000688;gene_name=TSPY3;ID=exon:HG002_chrY_T0000688:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9107556	9107650	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000688;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000688;transcript_name=HG002_chrY_T0000688;gene_name=TSPY3;ID=intron:HG002_chrY_T0000688:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9107651	9107743	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000688;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000688;transcript_name=HG002_chrY_T0000688;gene_name=TSPY3;ID=exon:HG002_chrY_T0000688:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9107744	9108437	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000688;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000688;transcript_name=HG002_chrY_T0000688;gene_name=TSPY3;ID=intron:HG002_chrY_T0000688:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9108438	9108639	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000688;gene_id=HG002_chrY_G0000203;Parent=HG002_chrY_T0000688;transcript_name=HG002_chrY_T0000688;gene_name=TSPY3;ID=exon:HG002_chrY_T0000688:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9115852	9123538	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1_6;gene_id=HG002_chrY_G0000204;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG002_chrY_G0000204;Name=FAM197Y9
HG002_chrY	CAT	transcript	9115852	9123538	1000	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000689;gene_id=HG002_chrY_G0000204;Parent=HG002_chrY_G0000204;transcript_name=HG002_chrY_T0000689;gene_name=FAM197Y9;ID=HG002_chrY_T0000689;Name=FAM197Y9
HG002_chrY	CAT	exon	9115852	9117979	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000689;gene_id=HG002_chrY_G0000204;Parent=HG002_chrY_T0000689;transcript_name=HG002_chrY_T0000689;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000689:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9117980	9121527	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000689;gene_id=HG002_chrY_G0000204;Parent=HG002_chrY_T0000689;transcript_name=HG002_chrY_T0000689;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000689:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9121528	9121613	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000689;gene_id=HG002_chrY_G0000204;Parent=HG002_chrY_T0000689;transcript_name=HG002_chrY_T0000689;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000689:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9121614	9123418	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000689;gene_id=HG002_chrY_G0000204;Parent=HG002_chrY_T0000689;transcript_name=HG002_chrY_T0000689;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000689:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9123419	9123538	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000689;gene_id=HG002_chrY_G0000204;Parent=HG002_chrY_T0000689;transcript_name=HG002_chrY_T0000689;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000689:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9117920	9123520	1000	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000690;gene_id=HG002_chrY_G0000204;Parent=HG002_chrY_G0000204;transcript_name=HG002_chrY_T0000690;gene_name=FAM197Y9;ID=HG002_chrY_T0000690;Name=FAM197Y9
HG002_chrY	CAT	exon	9117920	9117979	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000690;gene_id=HG002_chrY_G0000204;Parent=HG002_chrY_T0000690;transcript_name=HG002_chrY_T0000690;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000690:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9117980	9121527	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000690;gene_id=HG002_chrY_G0000204;Parent=HG002_chrY_T0000690;transcript_name=HG002_chrY_T0000690;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000690:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9121528	9121686	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000690;gene_id=HG002_chrY_G0000204;Parent=HG002_chrY_T0000690;transcript_name=HG002_chrY_T0000690;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000690:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9121687	9123186	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000690;gene_id=HG002_chrY_G0000204;Parent=HG002_chrY_T0000690;transcript_name=HG002_chrY_T0000690;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000690:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9123187	9123332	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000690;gene_id=HG002_chrY_G0000204;Parent=HG002_chrY_T0000690;transcript_name=HG002_chrY_T0000690;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000690:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9123333	9123418	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000690;gene_id=HG002_chrY_G0000204;Parent=HG002_chrY_T0000690;transcript_name=HG002_chrY_T0000690;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000690:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9123419	9123520	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000690;gene_id=HG002_chrY_G0000204;Parent=HG002_chrY_T0000690;transcript_name=HG002_chrY_T0000690;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000690:3;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9123187	9125180	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9_4;gene_id=HG002_chrY_G0000205;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG002_chrY_G0000205;Name=FAM197Y9
HG002_chrY	CAT	transcript	9123187	9125180	1000	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000691;gene_id=HG002_chrY_G0000205;Parent=HG002_chrY_G0000205;transcript_name=HG002_chrY_T0000691;gene_name=FAM197Y9;ID=HG002_chrY_T0000691;Name=FAM197Y9
HG002_chrY	CAT	exon	9123187	9123332	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000691;gene_id=HG002_chrY_G0000205;Parent=HG002_chrY_T0000691;transcript_name=HG002_chrY_T0000691;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000691:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9123333	9123444	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000691;gene_id=HG002_chrY_G0000205;Parent=HG002_chrY_T0000691;transcript_name=HG002_chrY_T0000691;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000691:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9123445	9123528	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000691;gene_id=HG002_chrY_G0000205;Parent=HG002_chrY_T0000691;transcript_name=HG002_chrY_T0000691;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000691:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9123529	9124870	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000691;gene_id=HG002_chrY_G0000205;Parent=HG002_chrY_T0000691;transcript_name=HG002_chrY_T0000691;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000691:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9124871	9125180	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000691;gene_id=HG002_chrY_G0000205;Parent=HG002_chrY_T0000691;transcript_name=HG002_chrY_T0000691;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000691:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9126129	9128925	.	+	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;gene_id=HG002_chrY_G0000206;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=HG002_chrY_G0000206;Name=TSPY3
HG002_chrY	CAT	transcript	9126129	9128925	100	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000692;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_G0000206;transcript_name=HG002_chrY_T0000692;gene_name=TSPY3;ID=HG002_chrY_T0000692;Name=TSPY3
HG002_chrY	CAT	exon	9126129	9126660	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000692;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000692;transcript_name=HG002_chrY_T0000692;gene_name=TSPY3;ID=exon:HG002_chrY_T0000692:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9126175	9126660	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000692;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000692;transcript_name=HG002_chrY_T0000692;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000692:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9126175	9126177	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000692;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000692;transcript_name=HG002_chrY_T0000692;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000692;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9126661	9127267	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000692;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000692;transcript_name=HG002_chrY_T0000692;gene_name=TSPY3;ID=intron:HG002_chrY_T0000692:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9127268	9127345	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000692;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000692;transcript_name=HG002_chrY_T0000692;gene_name=TSPY3;ID=exon:HG002_chrY_T0000692:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9127268	9127345	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000692;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000692;transcript_name=HG002_chrY_T0000692;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000692:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9127346	9127473	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000692;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000692;transcript_name=HG002_chrY_T0000692;gene_name=TSPY3;ID=intron:HG002_chrY_T0000692:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9127474	9127585	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000692;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000692;transcript_name=HG002_chrY_T0000692;gene_name=TSPY3;ID=exon:HG002_chrY_T0000692:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9127474	9127585	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000692;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000692;transcript_name=HG002_chrY_T0000692;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000692:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9127586	9127686	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000692;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000692;transcript_name=HG002_chrY_T0000692;gene_name=TSPY3;ID=intron:HG002_chrY_T0000692:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9127687	9127832	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000692;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000692;transcript_name=HG002_chrY_T0000692;gene_name=TSPY3;ID=exon:HG002_chrY_T0000692:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9127687	9127832	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000692;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000692;transcript_name=HG002_chrY_T0000692;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000692:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9127833	9127938	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000692;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000692;transcript_name=HG002_chrY_T0000692;gene_name=TSPY3;ID=intron:HG002_chrY_T0000692:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9127939	9128020	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000692;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000692;transcript_name=HG002_chrY_T0000692;gene_name=TSPY3;ID=exon:HG002_chrY_T0000692:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9127939	9128020	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000692;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000692;transcript_name=HG002_chrY_T0000692;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000692:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9128021	9128714	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000692;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000692;transcript_name=HG002_chrY_T0000692;gene_name=TSPY3;ID=intron:HG002_chrY_T0000692:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9128715	9128925	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000692;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000692;transcript_name=HG002_chrY_T0000692;gene_name=TSPY3;ID=exon:HG002_chrY_T0000692:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9128715	9128737	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000692;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000692;transcript_name=HG002_chrY_T0000692;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000692:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9128735	9128737	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000692;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000692;transcript_name=HG002_chrY_T0000692;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000692;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9126175	9128924	100	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000693;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_G0000206;transcript_name=HG002_chrY_T0000693;gene_name=TSPY3;ID=HG002_chrY_T0000693;Name=TSPY3
HG002_chrY	CAT	exon	9126175	9126660	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000693;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000693;transcript_name=HG002_chrY_T0000693;gene_name=TSPY3;ID=exon:HG002_chrY_T0000693:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9126175	9126660	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000693;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000693;transcript_name=HG002_chrY_T0000693;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000693:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9126175	9126177	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000693;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000693;transcript_name=HG002_chrY_T0000693;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000693;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9126661	9127267	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000693;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000693;transcript_name=HG002_chrY_T0000693;gene_name=TSPY3;ID=intron:HG002_chrY_T0000693:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9127268	9127345	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000693;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000693;transcript_name=HG002_chrY_T0000693;gene_name=TSPY3;ID=exon:HG002_chrY_T0000693:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9127268	9127345	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000693;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000693;transcript_name=HG002_chrY_T0000693;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000693:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9127346	9127473	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000693;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000693;transcript_name=HG002_chrY_T0000693;gene_name=TSPY3;ID=intron:HG002_chrY_T0000693:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9127474	9127585	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000693;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000693;transcript_name=HG002_chrY_T0000693;gene_name=TSPY3;ID=exon:HG002_chrY_T0000693:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9127474	9127585	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000693;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000693;transcript_name=HG002_chrY_T0000693;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000693:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9127586	9127686	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000693;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000693;transcript_name=HG002_chrY_T0000693;gene_name=TSPY3;ID=intron:HG002_chrY_T0000693:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9127687	9127832	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000693;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000693;transcript_name=HG002_chrY_T0000693;gene_name=TSPY3;ID=exon:HG002_chrY_T0000693:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9127687	9127832	.	+	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000693;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000693;transcript_name=HG002_chrY_T0000693;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000693:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9127833	9127927	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000693;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000693;transcript_name=HG002_chrY_T0000693;gene_name=TSPY3;ID=intron:HG002_chrY_T0000693:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9127928	9128020	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000693;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000693;transcript_name=HG002_chrY_T0000693;gene_name=TSPY3;ID=exon:HG002_chrY_T0000693:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9127928	9127990	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000693;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000693;transcript_name=HG002_chrY_T0000693;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000693:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9127988	9127990	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000693;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000693;transcript_name=HG002_chrY_T0000693;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000693;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9128021	9128714	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000693;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000693;transcript_name=HG002_chrY_T0000693;gene_name=TSPY3;ID=intron:HG002_chrY_T0000693:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9128715	9128924	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000693;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000693;transcript_name=HG002_chrY_T0000693;gene_name=TSPY3;ID=exon:HG002_chrY_T0000693:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9126175	9128737	100	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000694;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_G0000206;transcript_name=HG002_chrY_T0000694;gene_name=TSPY3;ID=HG002_chrY_T0000694;Name=TSPY3
HG002_chrY	CAT	exon	9126175	9126261	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000694;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000694;transcript_name=HG002_chrY_T0000694;gene_name=TSPY3;ID=exon:HG002_chrY_T0000694:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9126175	9126261	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000694;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000694;transcript_name=HG002_chrY_T0000694;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000694:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9126175	9126177	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000694;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000694;transcript_name=HG002_chrY_T0000694;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000694;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9126262	9126522	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000694;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000694;transcript_name=HG002_chrY_T0000694;gene_name=TSPY3;ID=intron:HG002_chrY_T0000694:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9126523	9126660	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000694;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000694;transcript_name=HG002_chrY_T0000694;gene_name=TSPY3;ID=exon:HG002_chrY_T0000694:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9126523	9126660	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000694;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000694;transcript_name=HG002_chrY_T0000694;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000694:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9126661	9127267	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000694;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000694;transcript_name=HG002_chrY_T0000694;gene_name=TSPY3;ID=intron:HG002_chrY_T0000694:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9127268	9127345	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000694;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000694;transcript_name=HG002_chrY_T0000694;gene_name=TSPY3;ID=exon:HG002_chrY_T0000694:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9127268	9127345	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000694;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000694;transcript_name=HG002_chrY_T0000694;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000694:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9127346	9127473	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000694;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000694;transcript_name=HG002_chrY_T0000694;gene_name=TSPY3;ID=intron:HG002_chrY_T0000694:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9127474	9127585	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000694;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000694;transcript_name=HG002_chrY_T0000694;gene_name=TSPY3;ID=exon:HG002_chrY_T0000694:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9127474	9127585	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000694;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000694;transcript_name=HG002_chrY_T0000694;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000694:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9127586	9127686	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000694;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000694;transcript_name=HG002_chrY_T0000694;gene_name=TSPY3;ID=intron:HG002_chrY_T0000694:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9127687	9127832	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000694;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000694;transcript_name=HG002_chrY_T0000694;gene_name=TSPY3;ID=exon:HG002_chrY_T0000694:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9127687	9127832	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000694;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000694;transcript_name=HG002_chrY_T0000694;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000694:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9127833	9127938	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000694;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000694;transcript_name=HG002_chrY_T0000694;gene_name=TSPY3;ID=intron:HG002_chrY_T0000694:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9127939	9128020	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000694;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000694;transcript_name=HG002_chrY_T0000694;gene_name=TSPY3;ID=exon:HG002_chrY_T0000694:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9127939	9128020	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000694;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000694;transcript_name=HG002_chrY_T0000694;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000694:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9128021	9128714	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000694;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000694;transcript_name=HG002_chrY_T0000694;gene_name=TSPY3;ID=intron:HG002_chrY_T0000694:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9128715	9128737	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000694;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000694;transcript_name=HG002_chrY_T0000694;gene_name=TSPY3;ID=exon:HG002_chrY_T0000694:6;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9128715	9128737	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000694;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000694;transcript_name=HG002_chrY_T0000694;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000694:6;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9128735	9128737	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000694;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000694;transcript_name=HG002_chrY_T0000694;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000694;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9126175	9128931	1000	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000695;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_G0000206;transcript_name=HG002_chrY_T0000695;gene_name=TSPY3;ID=HG002_chrY_T0000695;Name=TSPY3
HG002_chrY	CAT	exon	9126175	9126660	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000695;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000695;transcript_name=HG002_chrY_T0000695;gene_name=TSPY3;ID=exon:HG002_chrY_T0000695:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9126661	9127267	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000695;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000695;transcript_name=HG002_chrY_T0000695;gene_name=TSPY3;ID=intron:HG002_chrY_T0000695:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9127268	9127345	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000695;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000695;transcript_name=HG002_chrY_T0000695;gene_name=TSPY3;ID=exon:HG002_chrY_T0000695:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9127346	9127473	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000695;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000695;transcript_name=HG002_chrY_T0000695;gene_name=TSPY3;ID=intron:HG002_chrY_T0000695:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9127474	9128020	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000695;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000695;transcript_name=HG002_chrY_T0000695;gene_name=TSPY3;ID=exon:HG002_chrY_T0000695:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9128021	9128147	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000695;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000695;transcript_name=HG002_chrY_T0000695;gene_name=TSPY3;ID=intron:HG002_chrY_T0000695:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9128148	9128931	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000695;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000695;transcript_name=HG002_chrY_T0000695;gene_name=TSPY3;ID=exon:HG002_chrY_T0000695:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9127535	9128916	1000	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000696;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_G0000206;transcript_name=HG002_chrY_T0000696;gene_name=TSPY3;ID=HG002_chrY_T0000696;Name=TSPY3
HG002_chrY	CAT	exon	9127535	9127832	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000696;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000696;transcript_name=HG002_chrY_T0000696;gene_name=TSPY3;ID=exon:HG002_chrY_T0000696:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9127833	9127927	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000696;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000696;transcript_name=HG002_chrY_T0000696;gene_name=TSPY3;ID=intron:HG002_chrY_T0000696:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9127928	9128020	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000696;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000696;transcript_name=HG002_chrY_T0000696;gene_name=TSPY3;ID=exon:HG002_chrY_T0000696:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9128021	9128714	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000696;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000696;transcript_name=HG002_chrY_T0000696;gene_name=TSPY3;ID=intron:HG002_chrY_T0000696:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9128715	9128916	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000696;gene_id=HG002_chrY_G0000206;Parent=HG002_chrY_T0000696;transcript_name=HG002_chrY_T0000696;gene_name=TSPY3;ID=exon:HG002_chrY_T0000696:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9138065	9143811	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=HG002_chrY_G0000207;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000207;Name=FAM197Y5
HG002_chrY	CAT	transcript	9138065	9143811	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000697;gene_id=HG002_chrY_G0000207;Parent=HG002_chrY_G0000207;transcript_name=HG002_chrY_T0000697;gene_name=FAM197Y5;ID=HG002_chrY_T0000697;Name=FAM197Y5
HG002_chrY	CAT	exon	9138065	9138254	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000697;gene_id=HG002_chrY_G0000207;Parent=HG002_chrY_T0000697;transcript_name=HG002_chrY_T0000697;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000697:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9138255	9141804	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000697;gene_id=HG002_chrY_G0000207;Parent=HG002_chrY_T0000697;transcript_name=HG002_chrY_T0000697;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000697:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9141805	9141890	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000697;gene_id=HG002_chrY_G0000207;Parent=HG002_chrY_T0000697;transcript_name=HG002_chrY_T0000697;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000697:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9141891	9143697	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000697;gene_id=HG002_chrY_G0000207;Parent=HG002_chrY_T0000697;transcript_name=HG002_chrY_T0000697;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000697:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9143698	9143811	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000697;gene_id=HG002_chrY_G0000207;Parent=HG002_chrY_T0000697;transcript_name=HG002_chrY_T0000697;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000697:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9138195	9143799	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000698;gene_id=HG002_chrY_G0000207;Parent=HG002_chrY_G0000207;transcript_name=HG002_chrY_T0000698;gene_name=FAM197Y5;ID=HG002_chrY_T0000698;Name=FAM197Y5
HG002_chrY	CAT	exon	9138195	9138254	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000698;gene_id=HG002_chrY_G0000207;Parent=HG002_chrY_T0000698;transcript_name=HG002_chrY_T0000698;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000698:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9138255	9141804	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000698;gene_id=HG002_chrY_G0000207;Parent=HG002_chrY_T0000698;transcript_name=HG002_chrY_T0000698;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000698:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9141805	9141963	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000698;gene_id=HG002_chrY_G0000207;Parent=HG002_chrY_T0000698;transcript_name=HG002_chrY_T0000698;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000698:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9141964	9143465	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000698;gene_id=HG002_chrY_G0000207;Parent=HG002_chrY_T0000698;transcript_name=HG002_chrY_T0000698;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000698:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9143466	9143611	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000698;gene_id=HG002_chrY_G0000207;Parent=HG002_chrY_T0000698;transcript_name=HG002_chrY_T0000698;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000698:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9143612	9143697	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000698;gene_id=HG002_chrY_G0000207;Parent=HG002_chrY_T0000698;transcript_name=HG002_chrY_T0000698;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000698:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9143698	9143799	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000698;gene_id=HG002_chrY_G0000207;Parent=HG002_chrY_T0000698;transcript_name=HG002_chrY_T0000698;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000698:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9143466	9145458	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_6;gene_id=HG002_chrY_G0000208;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000208;Name=FAM197Y5
HG002_chrY	CAT	transcript	9143466	9145458	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000699;gene_id=HG002_chrY_G0000208;Parent=HG002_chrY_G0000208;transcript_name=HG002_chrY_T0000699;gene_name=FAM197Y5;ID=HG002_chrY_T0000699;Name=FAM197Y5
HG002_chrY	CAT	exon	9143466	9143611	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000699;gene_id=HG002_chrY_G0000208;Parent=HG002_chrY_T0000699;transcript_name=HG002_chrY_T0000699;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000699:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9143612	9145147	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000699;gene_id=HG002_chrY_G0000208;Parent=HG002_chrY_T0000699;transcript_name=HG002_chrY_T0000699;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000699:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9145148	9145458	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000699;gene_id=HG002_chrY_G0000208;Parent=HG002_chrY_T0000699;transcript_name=HG002_chrY_T0000699;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000699:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9146412	9149208	.	+	.	source_gene_common_name=TSPY10;source_gene=ENSG00000236424.7;gene_id=HG002_chrY_G0000209;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG002_chrY_G0000209;Name=TSPY10
HG002_chrY	CAT	transcript	9146412	9149208	100	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000700;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_G0000209;transcript_name=HG002_chrY_T0000700;gene_name=TSPY10;ID=HG002_chrY_T0000700;Name=TSPY10
HG002_chrY	CAT	exon	9146412	9146943	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000700;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000700;transcript_name=HG002_chrY_T0000700;gene_name=TSPY10;ID=exon:HG002_chrY_T0000700:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9146458	9146943	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000700;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000700;transcript_name=HG002_chrY_T0000700;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000700:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9146458	9146460	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000700;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000700;transcript_name=HG002_chrY_T0000700;gene_name=TSPY10;ID=start_codon:HG002_chrY_T0000700;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9146944	9147550	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000700;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000700;transcript_name=HG002_chrY_T0000700;gene_name=TSPY10;ID=intron:HG002_chrY_T0000700:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9147551	9147628	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000700;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000700;transcript_name=HG002_chrY_T0000700;gene_name=TSPY10;ID=exon:HG002_chrY_T0000700:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9147551	9147628	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000700;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000700;transcript_name=HG002_chrY_T0000700;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000700:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9147629	9147756	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000700;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000700;transcript_name=HG002_chrY_T0000700;gene_name=TSPY10;ID=intron:HG002_chrY_T0000700:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9147757	9147868	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000700;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000700;transcript_name=HG002_chrY_T0000700;gene_name=TSPY10;ID=exon:HG002_chrY_T0000700:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9147757	9147868	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000700;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000700;transcript_name=HG002_chrY_T0000700;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000700:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9147869	9147969	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000700;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000700;transcript_name=HG002_chrY_T0000700;gene_name=TSPY10;ID=intron:HG002_chrY_T0000700:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9147970	9148115	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000700;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000700;transcript_name=HG002_chrY_T0000700;gene_name=TSPY10;ID=exon:HG002_chrY_T0000700:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9147970	9148115	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000700;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000700;transcript_name=HG002_chrY_T0000700;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000700:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9148116	9148221	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000700;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000700;transcript_name=HG002_chrY_T0000700;gene_name=TSPY10;ID=intron:HG002_chrY_T0000700:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9148222	9148303	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000700;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000700;transcript_name=HG002_chrY_T0000700;gene_name=TSPY10;ID=exon:HG002_chrY_T0000700:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9148222	9148303	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000700;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000700;transcript_name=HG002_chrY_T0000700;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000700:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9148304	9148997	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000700;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000700;transcript_name=HG002_chrY_T0000700;gene_name=TSPY10;ID=intron:HG002_chrY_T0000700:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9148998	9149208	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000700;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000700;transcript_name=HG002_chrY_T0000700;gene_name=TSPY10;ID=exon:HG002_chrY_T0000700:5;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9148998	9149020	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000700;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000700;transcript_name=HG002_chrY_T0000700;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000700:5;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9149018	9149020	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000700;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000700;transcript_name=HG002_chrY_T0000700;gene_name=TSPY10;ID=stop_codon:HG002_chrY_T0000700;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9146458	9149207	100	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000701;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_G0000209;transcript_name=HG002_chrY_T0000701;gene_name=TSPY10;ID=HG002_chrY_T0000701;Name=TSPY10
HG002_chrY	CAT	exon	9146458	9146943	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000701;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000701;transcript_name=HG002_chrY_T0000701;gene_name=TSPY10;ID=exon:HG002_chrY_T0000701:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9146458	9146943	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000701;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000701;transcript_name=HG002_chrY_T0000701;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000701:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9146458	9146460	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000701;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000701;transcript_name=HG002_chrY_T0000701;gene_name=TSPY10;ID=start_codon:HG002_chrY_T0000701;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9146944	9147550	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000701;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000701;transcript_name=HG002_chrY_T0000701;gene_name=TSPY10;ID=intron:HG002_chrY_T0000701:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9147551	9147628	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000701;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000701;transcript_name=HG002_chrY_T0000701;gene_name=TSPY10;ID=exon:HG002_chrY_T0000701:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9147551	9147628	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000701;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000701;transcript_name=HG002_chrY_T0000701;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000701:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9147629	9147756	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000701;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000701;transcript_name=HG002_chrY_T0000701;gene_name=TSPY10;ID=intron:HG002_chrY_T0000701:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9147757	9147868	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000701;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000701;transcript_name=HG002_chrY_T0000701;gene_name=TSPY10;ID=exon:HG002_chrY_T0000701:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9147757	9147868	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000701;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000701;transcript_name=HG002_chrY_T0000701;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000701:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9147869	9147969	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000701;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000701;transcript_name=HG002_chrY_T0000701;gene_name=TSPY10;ID=intron:HG002_chrY_T0000701:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9147970	9148115	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000701;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000701;transcript_name=HG002_chrY_T0000701;gene_name=TSPY10;ID=exon:HG002_chrY_T0000701:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9147970	9148115	.	+	2	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000701;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000701;transcript_name=HG002_chrY_T0000701;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000701:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9148116	9148210	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000701;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000701;transcript_name=HG002_chrY_T0000701;gene_name=TSPY10;ID=intron:HG002_chrY_T0000701:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9148211	9148303	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000701;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000701;transcript_name=HG002_chrY_T0000701;gene_name=TSPY10;ID=exon:HG002_chrY_T0000701:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9148211	9148273	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000701;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000701;transcript_name=HG002_chrY_T0000701;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000701:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9148271	9148273	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000701;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000701;transcript_name=HG002_chrY_T0000701;gene_name=TSPY10;ID=stop_codon:HG002_chrY_T0000701;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9148304	9148997	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000701;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000701;transcript_name=HG002_chrY_T0000701;gene_name=TSPY10;ID=intron:HG002_chrY_T0000701:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9148998	9149207	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000701;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000701;transcript_name=HG002_chrY_T0000701;gene_name=TSPY10;ID=exon:HG002_chrY_T0000701:5;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9146458	9149214	1000	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000702;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_G0000209;transcript_name=HG002_chrY_T0000702;gene_name=TSPY10;ID=HG002_chrY_T0000702;Name=TSPY10
HG002_chrY	CAT	exon	9146458	9146943	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000702;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000702;transcript_name=HG002_chrY_T0000702;gene_name=TSPY10;ID=exon:HG002_chrY_T0000702:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9146944	9147550	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000702;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000702;transcript_name=HG002_chrY_T0000702;gene_name=TSPY10;ID=intron:HG002_chrY_T0000702:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9147551	9147628	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000702;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000702;transcript_name=HG002_chrY_T0000702;gene_name=TSPY10;ID=exon:HG002_chrY_T0000702:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9147629	9147756	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000702;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000702;transcript_name=HG002_chrY_T0000702;gene_name=TSPY10;ID=intron:HG002_chrY_T0000702:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9147757	9148303	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000702;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000702;transcript_name=HG002_chrY_T0000702;gene_name=TSPY10;ID=exon:HG002_chrY_T0000702:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9148304	9148430	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000702;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000702;transcript_name=HG002_chrY_T0000702;gene_name=TSPY10;ID=intron:HG002_chrY_T0000702:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9148431	9149214	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000702;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000702;transcript_name=HG002_chrY_T0000702;gene_name=TSPY10;ID=exon:HG002_chrY_T0000702:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9147818	9149199	1000	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000703;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_G0000209;transcript_name=HG002_chrY_T0000703;gene_name=TSPY10;ID=HG002_chrY_T0000703;Name=TSPY10
HG002_chrY	CAT	exon	9147818	9148115	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000703;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000703;transcript_name=HG002_chrY_T0000703;gene_name=TSPY10;ID=exon:HG002_chrY_T0000703:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9148116	9148221	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000703;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000703;transcript_name=HG002_chrY_T0000703;gene_name=TSPY10;ID=intron:HG002_chrY_T0000703:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9148222	9148303	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000703;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000703;transcript_name=HG002_chrY_T0000703;gene_name=TSPY10;ID=exon:HG002_chrY_T0000703:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9148304	9148997	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000703;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000703;transcript_name=HG002_chrY_T0000703;gene_name=TSPY10;ID=intron:HG002_chrY_T0000703:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9148998	9149199	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000703;gene_id=HG002_chrY_G0000209;Parent=HG002_chrY_T0000703;transcript_name=HG002_chrY_T0000703;gene_name=TSPY10;ID=exon:HG002_chrY_T0000703:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9158339	9164072	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=HG002_chrY_G0000210;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000210;Name=FAM197Y5
HG002_chrY	CAT	transcript	9158339	9164072	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000704;gene_id=HG002_chrY_G0000210;Parent=HG002_chrY_G0000210;transcript_name=HG002_chrY_T0000704;gene_name=FAM197Y5;ID=HG002_chrY_T0000704;Name=FAM197Y5
HG002_chrY	CAT	exon	9158339	9158528	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000704;gene_id=HG002_chrY_G0000210;Parent=HG002_chrY_T0000704;transcript_name=HG002_chrY_T0000704;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000704:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9158529	9162077	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000704;gene_id=HG002_chrY_G0000210;Parent=HG002_chrY_T0000704;transcript_name=HG002_chrY_T0000704;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000704:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9162078	9162163	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000704;gene_id=HG002_chrY_G0000210;Parent=HG002_chrY_T0000704;transcript_name=HG002_chrY_T0000704;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000704:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9162164	9163958	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000704;gene_id=HG002_chrY_G0000210;Parent=HG002_chrY_T0000704;transcript_name=HG002_chrY_T0000704;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000704:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9163959	9164072	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000704;gene_id=HG002_chrY_G0000210;Parent=HG002_chrY_T0000704;transcript_name=HG002_chrY_T0000704;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000704:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9158469	9164060	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000705;gene_id=HG002_chrY_G0000210;Parent=HG002_chrY_G0000210;transcript_name=HG002_chrY_T0000705;gene_name=FAM197Y5;ID=HG002_chrY_T0000705;Name=FAM197Y5
HG002_chrY	CAT	exon	9158469	9158528	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000705;gene_id=HG002_chrY_G0000210;Parent=HG002_chrY_T0000705;transcript_name=HG002_chrY_T0000705;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000705:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9158529	9162077	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000705;gene_id=HG002_chrY_G0000210;Parent=HG002_chrY_T0000705;transcript_name=HG002_chrY_T0000705;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000705:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9162078	9162236	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000705;gene_id=HG002_chrY_G0000210;Parent=HG002_chrY_T0000705;transcript_name=HG002_chrY_T0000705;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000705:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9162237	9163726	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000705;gene_id=HG002_chrY_G0000210;Parent=HG002_chrY_T0000705;transcript_name=HG002_chrY_T0000705;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000705:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9163727	9163872	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000705;gene_id=HG002_chrY_G0000210;Parent=HG002_chrY_T0000705;transcript_name=HG002_chrY_T0000705;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000705:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9163873	9163958	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000705;gene_id=HG002_chrY_G0000210;Parent=HG002_chrY_T0000705;transcript_name=HG002_chrY_T0000705;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000705:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9163959	9164060	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000705;gene_id=HG002_chrY_G0000210;Parent=HG002_chrY_T0000705;transcript_name=HG002_chrY_T0000705;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000705:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9163727	9165719	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_11;gene_id=HG002_chrY_G0000211;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000211;Name=FAM197Y5
HG002_chrY	CAT	transcript	9163727	9165719	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000706;gene_id=HG002_chrY_G0000211;Parent=HG002_chrY_G0000211;transcript_name=HG002_chrY_T0000706;gene_name=FAM197Y5;ID=HG002_chrY_T0000706;Name=FAM197Y5
HG002_chrY	CAT	exon	9163727	9163872	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000706;gene_id=HG002_chrY_G0000211;Parent=HG002_chrY_T0000706;transcript_name=HG002_chrY_T0000706;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000706:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9163873	9165408	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000706;gene_id=HG002_chrY_G0000211;Parent=HG002_chrY_T0000706;transcript_name=HG002_chrY_T0000706;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000706:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9165409	9165719	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000706;gene_id=HG002_chrY_G0000211;Parent=HG002_chrY_T0000706;transcript_name=HG002_chrY_T0000706;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000706:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9166673	9169487	.	+	.	source_gene_common_name=TSPY4;source_gene=ENSG00000233803.9;gene_id=HG002_chrY_G0000212;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG002_chrY_G0000212;Name=TSPY4
HG002_chrY	CAT	transcript	9166673	9169487	100	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000707;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_G0000212;transcript_name=HG002_chrY_T0000707;gene_name=TSPY4;ID=HG002_chrY_T0000707;Name=TSPY4
HG002_chrY	CAT	exon	9166673	9167222	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000707;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000707;transcript_name=HG002_chrY_T0000707;gene_name=TSPY4;ID=exon:HG002_chrY_T0000707:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9166719	9167222	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000707;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000707;transcript_name=HG002_chrY_T0000707;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000707:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9166719	9166721	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000707;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000707;transcript_name=HG002_chrY_T0000707;gene_name=TSPY4;ID=start_codon:HG002_chrY_T0000707;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9167223	9167829	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000707;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000707;transcript_name=HG002_chrY_T0000707;gene_name=TSPY4;ID=intron:HG002_chrY_T0000707:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9167830	9167907	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000707;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000707;transcript_name=HG002_chrY_T0000707;gene_name=TSPY4;ID=exon:HG002_chrY_T0000707:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9167830	9167907	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000707;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000707;transcript_name=HG002_chrY_T0000707;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000707:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9167908	9168035	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000707;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000707;transcript_name=HG002_chrY_T0000707;gene_name=TSPY4;ID=intron:HG002_chrY_T0000707:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9168036	9168147	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000707;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000707;transcript_name=HG002_chrY_T0000707;gene_name=TSPY4;ID=exon:HG002_chrY_T0000707:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9168036	9168147	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000707;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000707;transcript_name=HG002_chrY_T0000707;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000707:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9168148	9168248	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000707;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000707;transcript_name=HG002_chrY_T0000707;gene_name=TSPY4;ID=intron:HG002_chrY_T0000707:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9168249	9168394	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000707;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000707;transcript_name=HG002_chrY_T0000707;gene_name=TSPY4;ID=exon:HG002_chrY_T0000707:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9168249	9168394	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000707;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000707;transcript_name=HG002_chrY_T0000707;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000707:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9168395	9168500	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000707;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000707;transcript_name=HG002_chrY_T0000707;gene_name=TSPY4;ID=intron:HG002_chrY_T0000707:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9168501	9168582	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000707;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000707;transcript_name=HG002_chrY_T0000707;gene_name=TSPY4;ID=exon:HG002_chrY_T0000707:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9168501	9168582	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000707;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000707;transcript_name=HG002_chrY_T0000707;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000707:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9168583	9169276	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000707;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000707;transcript_name=HG002_chrY_T0000707;gene_name=TSPY4;ID=intron:HG002_chrY_T0000707:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9169277	9169487	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000707;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000707;transcript_name=HG002_chrY_T0000707;gene_name=TSPY4;ID=exon:HG002_chrY_T0000707:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9169277	9169299	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000707;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000707;transcript_name=HG002_chrY_T0000707;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000707:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9169297	9169299	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000707;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000707;transcript_name=HG002_chrY_T0000707;gene_name=TSPY4;ID=stop_codon:HG002_chrY_T0000707;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9166673	9169366	100	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000708;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_G0000212;transcript_name=HG002_chrY_T0000708;gene_name=TSPY4;ID=HG002_chrY_T0000708;Name=TSPY4
HG002_chrY	CAT	exon	9166673	9166805	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000708;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000708;transcript_name=HG002_chrY_T0000708;gene_name=TSPY4;ID=exon:HG002_chrY_T0000708:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9166719	9166805	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000708;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000708;transcript_name=HG002_chrY_T0000708;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000708:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9166719	9166721	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000708;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000708;transcript_name=HG002_chrY_T0000708;gene_name=TSPY4;ID=start_codon:HG002_chrY_T0000708;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9166806	9167084	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000708;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000708;transcript_name=HG002_chrY_T0000708;gene_name=TSPY4;ID=intron:HG002_chrY_T0000708:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9167085	9167222	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000708;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000708;transcript_name=HG002_chrY_T0000708;gene_name=TSPY4;ID=exon:HG002_chrY_T0000708:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9167085	9167222	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000708;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000708;transcript_name=HG002_chrY_T0000708;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000708:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9167223	9167829	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000708;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000708;transcript_name=HG002_chrY_T0000708;gene_name=TSPY4;ID=intron:HG002_chrY_T0000708:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9167830	9167907	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000708;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000708;transcript_name=HG002_chrY_T0000708;gene_name=TSPY4;ID=exon:HG002_chrY_T0000708:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9167830	9167907	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000708;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000708;transcript_name=HG002_chrY_T0000708;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000708:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9167908	9168035	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000708;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000708;transcript_name=HG002_chrY_T0000708;gene_name=TSPY4;ID=intron:HG002_chrY_T0000708:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9168036	9168147	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000708;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000708;transcript_name=HG002_chrY_T0000708;gene_name=TSPY4;ID=exon:HG002_chrY_T0000708:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9168036	9168147	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000708;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000708;transcript_name=HG002_chrY_T0000708;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000708:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9168148	9168248	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000708;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000708;transcript_name=HG002_chrY_T0000708;gene_name=TSPY4;ID=intron:HG002_chrY_T0000708:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9168249	9168394	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000708;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000708;transcript_name=HG002_chrY_T0000708;gene_name=TSPY4;ID=exon:HG002_chrY_T0000708:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9168249	9168394	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000708;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000708;transcript_name=HG002_chrY_T0000708;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000708:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9168395	9168500	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000708;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000708;transcript_name=HG002_chrY_T0000708;gene_name=TSPY4;ID=intron:HG002_chrY_T0000708:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9168501	9168582	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000708;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000708;transcript_name=HG002_chrY_T0000708;gene_name=TSPY4;ID=exon:HG002_chrY_T0000708:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9168501	9168582	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000708;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000708;transcript_name=HG002_chrY_T0000708;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000708:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9168583	9169276	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000708;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000708;transcript_name=HG002_chrY_T0000708;gene_name=TSPY4;ID=intron:HG002_chrY_T0000708:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9169277	9169366	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000708;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000708;transcript_name=HG002_chrY_T0000708;gene_name=TSPY4;ID=exon:HG002_chrY_T0000708:6;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9169277	9169299	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000708;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000708;transcript_name=HG002_chrY_T0000708;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000708:6;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9169297	9169299	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000708;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000708;transcript_name=HG002_chrY_T0000708;gene_name=TSPY4;ID=stop_codon:HG002_chrY_T0000708;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9166719	9169486	100	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000709;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_G0000212;transcript_name=HG002_chrY_T0000709;gene_name=TSPY4;ID=HG002_chrY_T0000709;Name=TSPY4
HG002_chrY	CAT	exon	9166719	9167222	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000709;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000709;transcript_name=HG002_chrY_T0000709;gene_name=TSPY4;ID=exon:HG002_chrY_T0000709:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9166719	9167222	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000709;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000709;transcript_name=HG002_chrY_T0000709;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000709:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9166719	9166721	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000709;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000709;transcript_name=HG002_chrY_T0000709;gene_name=TSPY4;ID=start_codon:HG002_chrY_T0000709;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9167223	9167829	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000709;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000709;transcript_name=HG002_chrY_T0000709;gene_name=TSPY4;ID=intron:HG002_chrY_T0000709:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9167830	9167907	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000709;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000709;transcript_name=HG002_chrY_T0000709;gene_name=TSPY4;ID=exon:HG002_chrY_T0000709:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9167830	9167907	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000709;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000709;transcript_name=HG002_chrY_T0000709;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000709:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9167908	9168035	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000709;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000709;transcript_name=HG002_chrY_T0000709;gene_name=TSPY4;ID=intron:HG002_chrY_T0000709:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9168036	9168147	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000709;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000709;transcript_name=HG002_chrY_T0000709;gene_name=TSPY4;ID=exon:HG002_chrY_T0000709:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9168036	9168147	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000709;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000709;transcript_name=HG002_chrY_T0000709;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000709:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9168148	9168248	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000709;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000709;transcript_name=HG002_chrY_T0000709;gene_name=TSPY4;ID=intron:HG002_chrY_T0000709:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9168249	9168394	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000709;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000709;transcript_name=HG002_chrY_T0000709;gene_name=TSPY4;ID=exon:HG002_chrY_T0000709:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9168249	9168394	.	+	2	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000709;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000709;transcript_name=HG002_chrY_T0000709;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000709:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9168395	9168489	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000709;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000709;transcript_name=HG002_chrY_T0000709;gene_name=TSPY4;ID=intron:HG002_chrY_T0000709:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9168490	9168582	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000709;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000709;transcript_name=HG002_chrY_T0000709;gene_name=TSPY4;ID=exon:HG002_chrY_T0000709:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9168490	9168552	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000709;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000709;transcript_name=HG002_chrY_T0000709;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000709:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9168550	9168552	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000709;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000709;transcript_name=HG002_chrY_T0000709;gene_name=TSPY4;ID=stop_codon:HG002_chrY_T0000709;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9168583	9169276	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000709;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000709;transcript_name=HG002_chrY_T0000709;gene_name=TSPY4;ID=intron:HG002_chrY_T0000709:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9169277	9169486	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000709;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000709;transcript_name=HG002_chrY_T0000709;gene_name=TSPY4;ID=exon:HG002_chrY_T0000709:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9166719	9169493	1000	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000710;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_G0000212;transcript_name=HG002_chrY_T0000710;gene_name=TSPY4;ID=HG002_chrY_T0000710;Name=TSPY4
HG002_chrY	CAT	exon	9166719	9167222	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000710;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000710;transcript_name=HG002_chrY_T0000710;gene_name=TSPY4;ID=exon:HG002_chrY_T0000710:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9167223	9167829	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000710;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000710;transcript_name=HG002_chrY_T0000710;gene_name=TSPY4;ID=intron:HG002_chrY_T0000710:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9167830	9167907	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000710;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000710;transcript_name=HG002_chrY_T0000710;gene_name=TSPY4;ID=exon:HG002_chrY_T0000710:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9167908	9168035	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000710;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000710;transcript_name=HG002_chrY_T0000710;gene_name=TSPY4;ID=intron:HG002_chrY_T0000710:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9168036	9168582	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000710;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000710;transcript_name=HG002_chrY_T0000710;gene_name=TSPY4;ID=exon:HG002_chrY_T0000710:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9168583	9168709	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000710;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000710;transcript_name=HG002_chrY_T0000710;gene_name=TSPY4;ID=intron:HG002_chrY_T0000710:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9168710	9169493	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000710;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000710;transcript_name=HG002_chrY_T0000710;gene_name=TSPY4;ID=exon:HG002_chrY_T0000710:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9168097	9169478	1000	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000711;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_G0000212;transcript_name=HG002_chrY_T0000711;gene_name=TSPY4;ID=HG002_chrY_T0000711;Name=TSPY4
HG002_chrY	CAT	exon	9168097	9168394	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000711;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000711;transcript_name=HG002_chrY_T0000711;gene_name=TSPY4;ID=exon:HG002_chrY_T0000711:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9168395	9168489	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000711;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000711;transcript_name=HG002_chrY_T0000711;gene_name=TSPY4;ID=intron:HG002_chrY_T0000711:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9168490	9168582	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000711;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000711;transcript_name=HG002_chrY_T0000711;gene_name=TSPY4;ID=exon:HG002_chrY_T0000711:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9168583	9169276	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000711;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000711;transcript_name=HG002_chrY_T0000711;gene_name=TSPY4;ID=intron:HG002_chrY_T0000711:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9169277	9169478	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000711;gene_id=HG002_chrY_G0000212;Parent=HG002_chrY_T0000711;transcript_name=HG002_chrY_T0000711;gene_name=TSPY4;ID=exon:HG002_chrY_T0000711:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9178648	9184387	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=HG002_chrY_G0000213;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000213;Name=FAM197Y5
HG002_chrY	CAT	transcript	9178648	9184387	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000712;gene_id=HG002_chrY_G0000213;Parent=HG002_chrY_G0000213;transcript_name=HG002_chrY_T0000712;gene_name=FAM197Y5;ID=HG002_chrY_T0000712;Name=FAM197Y5
HG002_chrY	CAT	exon	9178648	9178837	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000712;gene_id=HG002_chrY_G0000213;Parent=HG002_chrY_T0000712;transcript_name=HG002_chrY_T0000712;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000712:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9178838	9182386	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000712;gene_id=HG002_chrY_G0000213;Parent=HG002_chrY_T0000712;transcript_name=HG002_chrY_T0000712;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000712:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9182387	9182472	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000712;gene_id=HG002_chrY_G0000213;Parent=HG002_chrY_T0000712;transcript_name=HG002_chrY_T0000712;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000712:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9182473	9184273	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000712;gene_id=HG002_chrY_G0000213;Parent=HG002_chrY_T0000712;transcript_name=HG002_chrY_T0000712;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000712:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9184274	9184387	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000712;gene_id=HG002_chrY_G0000213;Parent=HG002_chrY_T0000712;transcript_name=HG002_chrY_T0000712;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000712:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9178778	9184375	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000713;gene_id=HG002_chrY_G0000213;Parent=HG002_chrY_G0000213;transcript_name=HG002_chrY_T0000713;gene_name=FAM197Y5;ID=HG002_chrY_T0000713;Name=FAM197Y5
HG002_chrY	CAT	exon	9178778	9178837	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000713;gene_id=HG002_chrY_G0000213;Parent=HG002_chrY_T0000713;transcript_name=HG002_chrY_T0000713;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000713:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9178838	9182386	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000713;gene_id=HG002_chrY_G0000213;Parent=HG002_chrY_T0000713;transcript_name=HG002_chrY_T0000713;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000713:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9182387	9182545	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000713;gene_id=HG002_chrY_G0000213;Parent=HG002_chrY_T0000713;transcript_name=HG002_chrY_T0000713;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000713:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9182546	9184041	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000713;gene_id=HG002_chrY_G0000213;Parent=HG002_chrY_T0000713;transcript_name=HG002_chrY_T0000713;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000713:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9184042	9184187	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000713;gene_id=HG002_chrY_G0000213;Parent=HG002_chrY_T0000713;transcript_name=HG002_chrY_T0000713;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000713:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9184188	9184273	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000713;gene_id=HG002_chrY_G0000213;Parent=HG002_chrY_T0000713;transcript_name=HG002_chrY_T0000713;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000713:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9184274	9184375	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000713;gene_id=HG002_chrY_G0000213;Parent=HG002_chrY_T0000713;transcript_name=HG002_chrY_T0000713;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000713:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9184042	9186034	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_4;gene_id=HG002_chrY_G0000214;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000214;Name=FAM197Y5
HG002_chrY	CAT	transcript	9184042	9186034	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000714;gene_id=HG002_chrY_G0000214;Parent=HG002_chrY_G0000214;transcript_name=HG002_chrY_T0000714;gene_name=FAM197Y5;ID=HG002_chrY_T0000714;Name=FAM197Y5
HG002_chrY	CAT	exon	9184042	9184187	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000714;gene_id=HG002_chrY_G0000214;Parent=HG002_chrY_T0000714;transcript_name=HG002_chrY_T0000714;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000714:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9184188	9185723	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000714;gene_id=HG002_chrY_G0000214;Parent=HG002_chrY_T0000714;transcript_name=HG002_chrY_T0000714;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000714:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9185724	9186034	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000714;gene_id=HG002_chrY_G0000214;Parent=HG002_chrY_T0000714;transcript_name=HG002_chrY_T0000714;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000714:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9186988	9189784	.	+	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;alternative_source_transcripts=ENST00000457222.6;gene_id=HG002_chrY_G0000215;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=HG002_chrY_G0000215;Name=TSPY3
HG002_chrY	CAT	transcript	9186988	9189784	100	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000715;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_G0000215;transcript_name=HG002_chrY_T0000715;gene_name=TSPY3;ID=HG002_chrY_T0000715;Name=TSPY3
HG002_chrY	CAT	exon	9186988	9187519	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000715;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000715;transcript_name=HG002_chrY_T0000715;gene_name=TSPY3;ID=exon:HG002_chrY_T0000715:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9187034	9187519	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000715;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000715;transcript_name=HG002_chrY_T0000715;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000715:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9187034	9187036	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000715;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000715;transcript_name=HG002_chrY_T0000715;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000715;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9187520	9188126	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000715;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000715;transcript_name=HG002_chrY_T0000715;gene_name=TSPY3;ID=intron:HG002_chrY_T0000715:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9188127	9188204	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000715;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000715;transcript_name=HG002_chrY_T0000715;gene_name=TSPY3;ID=exon:HG002_chrY_T0000715:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9188127	9188204	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000715;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000715;transcript_name=HG002_chrY_T0000715;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000715:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9188205	9188332	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000715;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000715;transcript_name=HG002_chrY_T0000715;gene_name=TSPY3;ID=intron:HG002_chrY_T0000715:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9188333	9188444	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000715;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000715;transcript_name=HG002_chrY_T0000715;gene_name=TSPY3;ID=exon:HG002_chrY_T0000715:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9188333	9188444	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000715;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000715;transcript_name=HG002_chrY_T0000715;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000715:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9188445	9188545	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000715;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000715;transcript_name=HG002_chrY_T0000715;gene_name=TSPY3;ID=intron:HG002_chrY_T0000715:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9188546	9188691	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000715;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000715;transcript_name=HG002_chrY_T0000715;gene_name=TSPY3;ID=exon:HG002_chrY_T0000715:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9188546	9188691	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000715;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000715;transcript_name=HG002_chrY_T0000715;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000715:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9188692	9188797	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000715;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000715;transcript_name=HG002_chrY_T0000715;gene_name=TSPY3;ID=intron:HG002_chrY_T0000715:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9188798	9188879	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000715;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000715;transcript_name=HG002_chrY_T0000715;gene_name=TSPY3;ID=exon:HG002_chrY_T0000715:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9188798	9188879	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000715;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000715;transcript_name=HG002_chrY_T0000715;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000715:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9188880	9189573	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000715;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000715;transcript_name=HG002_chrY_T0000715;gene_name=TSPY3;ID=intron:HG002_chrY_T0000715:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9189574	9189784	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000715;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000715;transcript_name=HG002_chrY_T0000715;gene_name=TSPY3;ID=exon:HG002_chrY_T0000715:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9189574	9189596	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000715;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000715;transcript_name=HG002_chrY_T0000715;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000715:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9189594	9189596	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG002_chrY_T0000715;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000715;transcript_name=HG002_chrY_T0000715;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000715;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9187034	9189783	100	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000716;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_G0000215;transcript_name=HG002_chrY_T0000716;gene_name=TSPY3;ID=HG002_chrY_T0000716;Name=TSPY3
HG002_chrY	CAT	exon	9187034	9187519	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000716;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000716;transcript_name=HG002_chrY_T0000716;gene_name=TSPY3;ID=exon:HG002_chrY_T0000716:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9187034	9187519	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000716;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000716;transcript_name=HG002_chrY_T0000716;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000716:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9187034	9187036	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000716;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000716;transcript_name=HG002_chrY_T0000716;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000716;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9187520	9188126	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000716;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000716;transcript_name=HG002_chrY_T0000716;gene_name=TSPY3;ID=intron:HG002_chrY_T0000716:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9188127	9188204	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000716;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000716;transcript_name=HG002_chrY_T0000716;gene_name=TSPY3;ID=exon:HG002_chrY_T0000716:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9188127	9188204	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000716;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000716;transcript_name=HG002_chrY_T0000716;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000716:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9188205	9188332	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000716;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000716;transcript_name=HG002_chrY_T0000716;gene_name=TSPY3;ID=intron:HG002_chrY_T0000716:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9188333	9188444	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000716;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000716;transcript_name=HG002_chrY_T0000716;gene_name=TSPY3;ID=exon:HG002_chrY_T0000716:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9188333	9188444	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000716;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000716;transcript_name=HG002_chrY_T0000716;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000716:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9188445	9188545	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000716;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000716;transcript_name=HG002_chrY_T0000716;gene_name=TSPY3;ID=intron:HG002_chrY_T0000716:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9188546	9188691	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000716;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000716;transcript_name=HG002_chrY_T0000716;gene_name=TSPY3;ID=exon:HG002_chrY_T0000716:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9188546	9188691	.	+	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000716;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000716;transcript_name=HG002_chrY_T0000716;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000716:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9188692	9188786	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000716;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000716;transcript_name=HG002_chrY_T0000716;gene_name=TSPY3;ID=intron:HG002_chrY_T0000716:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9188787	9188879	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000716;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000716;transcript_name=HG002_chrY_T0000716;gene_name=TSPY3;ID=exon:HG002_chrY_T0000716:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9188787	9188849	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000716;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000716;transcript_name=HG002_chrY_T0000716;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000716:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9188847	9188849	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000716;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000716;transcript_name=HG002_chrY_T0000716;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000716;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9188880	9189573	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000716;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000716;transcript_name=HG002_chrY_T0000716;gene_name=TSPY3;ID=intron:HG002_chrY_T0000716:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9189574	9189783	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG002_chrY_T0000716;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000716;transcript_name=HG002_chrY_T0000716;gene_name=TSPY3;ID=exon:HG002_chrY_T0000716:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9187034	9189596	100	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000717;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_G0000215;transcript_name=HG002_chrY_T0000717;gene_name=TSPY3;ID=HG002_chrY_T0000717;Name=TSPY3
HG002_chrY	CAT	exon	9187034	9187120	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000717;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000717;transcript_name=HG002_chrY_T0000717;gene_name=TSPY3;ID=exon:HG002_chrY_T0000717:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9187034	9187120	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000717;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000717;transcript_name=HG002_chrY_T0000717;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000717:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9187034	9187036	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000717;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000717;transcript_name=HG002_chrY_T0000717;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000717;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9187121	9187381	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000717;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000717;transcript_name=HG002_chrY_T0000717;gene_name=TSPY3;ID=intron:HG002_chrY_T0000717:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9187382	9187519	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000717;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000717;transcript_name=HG002_chrY_T0000717;gene_name=TSPY3;ID=exon:HG002_chrY_T0000717:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9187382	9187519	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000717;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000717;transcript_name=HG002_chrY_T0000717;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000717:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9187520	9188126	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000717;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000717;transcript_name=HG002_chrY_T0000717;gene_name=TSPY3;ID=intron:HG002_chrY_T0000717:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9188127	9188204	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000717;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000717;transcript_name=HG002_chrY_T0000717;gene_name=TSPY3;ID=exon:HG002_chrY_T0000717:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9188127	9188204	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000717;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000717;transcript_name=HG002_chrY_T0000717;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000717:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9188205	9188332	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000717;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000717;transcript_name=HG002_chrY_T0000717;gene_name=TSPY3;ID=intron:HG002_chrY_T0000717:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9188333	9188444	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000717;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000717;transcript_name=HG002_chrY_T0000717;gene_name=TSPY3;ID=exon:HG002_chrY_T0000717:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9188333	9188444	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000717;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000717;transcript_name=HG002_chrY_T0000717;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000717:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9188445	9188545	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000717;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000717;transcript_name=HG002_chrY_T0000717;gene_name=TSPY3;ID=intron:HG002_chrY_T0000717:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9188546	9188691	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000717;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000717;transcript_name=HG002_chrY_T0000717;gene_name=TSPY3;ID=exon:HG002_chrY_T0000717:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9188546	9188691	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000717;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000717;transcript_name=HG002_chrY_T0000717;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000717:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9188692	9188797	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000717;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000717;transcript_name=HG002_chrY_T0000717;gene_name=TSPY3;ID=intron:HG002_chrY_T0000717:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9188798	9188879	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000717;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000717;transcript_name=HG002_chrY_T0000717;gene_name=TSPY3;ID=exon:HG002_chrY_T0000717:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9188798	9188879	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000717;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000717;transcript_name=HG002_chrY_T0000717;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000717:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9188880	9189573	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000717;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000717;transcript_name=HG002_chrY_T0000717;gene_name=TSPY3;ID=intron:HG002_chrY_T0000717:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9189574	9189596	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000717;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000717;transcript_name=HG002_chrY_T0000717;gene_name=TSPY3;ID=exon:HG002_chrY_T0000717:6;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9189574	9189596	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000717;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000717;transcript_name=HG002_chrY_T0000717;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000717:6;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9189594	9189596	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG002_chrY_T0000717;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000717;transcript_name=HG002_chrY_T0000717;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000717;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9187034	9189790	1000	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG002_chrY_T0000718;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_G0000215;transcript_name=HG002_chrY_T0000718;gene_name=TSPY3;ID=HG002_chrY_T0000718;Name=TSPY3
HG002_chrY	CAT	exon	9187034	9187519	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG002_chrY_T0000718;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000718;transcript_name=HG002_chrY_T0000718;gene_name=TSPY3;ID=exon:HG002_chrY_T0000718:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9187520	9188126	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG002_chrY_T0000718;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000718;transcript_name=HG002_chrY_T0000718;gene_name=TSPY3;ID=intron:HG002_chrY_T0000718:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9188127	9188204	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG002_chrY_T0000718;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000718;transcript_name=HG002_chrY_T0000718;gene_name=TSPY3;ID=exon:HG002_chrY_T0000718:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9188205	9188332	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG002_chrY_T0000718;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000718;transcript_name=HG002_chrY_T0000718;gene_name=TSPY3;ID=intron:HG002_chrY_T0000718:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9188333	9188879	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG002_chrY_T0000718;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000718;transcript_name=HG002_chrY_T0000718;gene_name=TSPY3;ID=exon:HG002_chrY_T0000718:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9188880	9189006	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG002_chrY_T0000718;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000718;transcript_name=HG002_chrY_T0000718;gene_name=TSPY3;ID=intron:HG002_chrY_T0000718:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9189007	9189790	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG002_chrY_T0000718;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000718;transcript_name=HG002_chrY_T0000718;gene_name=TSPY3;ID=exon:HG002_chrY_T0000718:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9188394	9189775	1000	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=HG002_chrY_T0000719;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_G0000215;transcript_name=HG002_chrY_T0000719;gene_name=TSPY3;ID=HG002_chrY_T0000719;Name=TSPY3
HG002_chrY	CAT	exon	9188394	9188691	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=HG002_chrY_T0000719;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000719;transcript_name=HG002_chrY_T0000719;gene_name=TSPY3;ID=exon:HG002_chrY_T0000719:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9188692	9188786	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=HG002_chrY_T0000719;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000719;transcript_name=HG002_chrY_T0000719;gene_name=TSPY3;ID=intron:HG002_chrY_T0000719:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9188787	9188879	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=HG002_chrY_T0000719;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000719;transcript_name=HG002_chrY_T0000719;gene_name=TSPY3;ID=exon:HG002_chrY_T0000719:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9188880	9189573	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=HG002_chrY_T0000719;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000719;transcript_name=HG002_chrY_T0000719;gene_name=TSPY3;ID=intron:HG002_chrY_T0000719:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9189574	9189775	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=HG002_chrY_T0000719;gene_id=HG002_chrY_G0000215;Parent=HG002_chrY_T0000719;transcript_name=HG002_chrY_T0000719;gene_name=TSPY3;ID=exon:HG002_chrY_T0000719:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9196984	9204872	.	-	.	source_gene_common_name=FAM197Y7;source_gene=ENSG00000228383.7_3;gene_id=HG002_chrY_G0000216;gene_biotype=lncRNA;gene_name=FAM197Y7;gene_sources=liftoff;ID=HG002_chrY_G0000216;Name=FAM197Y7
HG002_chrY	CAT	transcript	9196984	9204872	1000	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000720;gene_id=HG002_chrY_G0000216;Parent=HG002_chrY_G0000216;transcript_name=HG002_chrY_T0000720;gene_name=FAM197Y7;ID=HG002_chrY_T0000720;Name=FAM197Y7
HG002_chrY	CAT	exon	9196984	9199107	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000720;gene_id=HG002_chrY_G0000216;Parent=HG002_chrY_T0000720;transcript_name=HG002_chrY_T0000720;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000720:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9199108	9202658	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000720;gene_id=HG002_chrY_G0000216;Parent=HG002_chrY_T0000720;transcript_name=HG002_chrY_T0000720;gene_name=FAM197Y7;ID=intron:HG002_chrY_T0000720:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9202659	9202744	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000720;gene_id=HG002_chrY_G0000216;Parent=HG002_chrY_T0000720;transcript_name=HG002_chrY_T0000720;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000720:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9202745	9204551	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000720;gene_id=HG002_chrY_G0000216;Parent=HG002_chrY_T0000720;transcript_name=HG002_chrY_T0000720;gene_name=FAM197Y7;ID=intron:HG002_chrY_T0000720:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9204552	9204661	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000720;gene_id=HG002_chrY_G0000216;Parent=HG002_chrY_T0000720;transcript_name=HG002_chrY_T0000720;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000720:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9204662	9204857	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000720;gene_id=HG002_chrY_G0000216;Parent=HG002_chrY_T0000720;transcript_name=HG002_chrY_T0000720;gene_name=FAM197Y7;ID=intron:HG002_chrY_T0000720:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9204858	9204872	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000720;gene_id=HG002_chrY_G0000216;Parent=HG002_chrY_T0000720;transcript_name=HG002_chrY_T0000720;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000720:3;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9199048	9204653	1000	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000721;gene_id=HG002_chrY_G0000216;Parent=HG002_chrY_G0000216;transcript_name=HG002_chrY_T0000721;gene_name=FAM197Y7;ID=HG002_chrY_T0000721;Name=FAM197Y7
HG002_chrY	CAT	exon	9199048	9199107	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000721;gene_id=HG002_chrY_G0000216;Parent=HG002_chrY_T0000721;transcript_name=HG002_chrY_T0000721;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000721:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9199108	9202658	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000721;gene_id=HG002_chrY_G0000216;Parent=HG002_chrY_T0000721;transcript_name=HG002_chrY_T0000721;gene_name=FAM197Y7;ID=intron:HG002_chrY_T0000721:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9202659	9202817	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000721;gene_id=HG002_chrY_G0000216;Parent=HG002_chrY_T0000721;transcript_name=HG002_chrY_T0000721;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000721:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9202818	9204319	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000721;gene_id=HG002_chrY_G0000216;Parent=HG002_chrY_T0000721;transcript_name=HG002_chrY_T0000721;gene_name=FAM197Y7;ID=intron:HG002_chrY_T0000721:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9204320	9204465	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000721;gene_id=HG002_chrY_G0000216;Parent=HG002_chrY_T0000721;transcript_name=HG002_chrY_T0000721;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000721:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9204466	9204551	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000721;gene_id=HG002_chrY_G0000216;Parent=HG002_chrY_T0000721;transcript_name=HG002_chrY_T0000721;gene_name=FAM197Y7;ID=intron:HG002_chrY_T0000721:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9204552	9204653	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000721;gene_id=HG002_chrY_G0000216;Parent=HG002_chrY_T0000721;transcript_name=HG002_chrY_T0000721;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000721:3;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9204320	9206312	.	-	.	source_gene_common_name=ENSG00000286120;source_gene=ENSG00000286120.1_1;gene_id=HG002_chrY_G0000217;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000286120;gene_sources=liftoff;ID=HG002_chrY_G0000217;Name=ENSG00000286120
HG002_chrY	CAT	transcript	9204320	9206312	1000	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG002_chrY_T0000722;gene_id=HG002_chrY_G0000217;Parent=HG002_chrY_G0000217;transcript_name=HG002_chrY_T0000722;gene_name=ENSG00000286120;ID=HG002_chrY_T0000722;Name=ENSG00000286120
HG002_chrY	CAT	exon	9204320	9204465	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG002_chrY_T0000722;gene_id=HG002_chrY_G0000217;Parent=HG002_chrY_T0000722;transcript_name=HG002_chrY_T0000722;gene_name=ENSG00000286120;ID=exon:HG002_chrY_T0000722:0;Name=ENSG00000286120;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9204466	9206001	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG002_chrY_T0000722;gene_id=HG002_chrY_G0000217;Parent=HG002_chrY_T0000722;transcript_name=HG002_chrY_T0000722;gene_name=ENSG00000286120;ID=intron:HG002_chrY_T0000722:0;Name=ENSG00000286120;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9206002	9206312	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG002_chrY_T0000722;gene_id=HG002_chrY_G0000217;Parent=HG002_chrY_T0000722;transcript_name=HG002_chrY_T0000722;gene_name=ENSG00000286120;ID=exon:HG002_chrY_T0000722:1;Name=ENSG00000286120;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9207266	9210062	.	+	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;gene_id=HG002_chrY_G0000218;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=HG002_chrY_G0000218;Name=TSPY3
HG002_chrY	CAT	transcript	9207266	9210062	100	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000723;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_G0000218;transcript_name=HG002_chrY_T0000723;gene_name=TSPY3;ID=HG002_chrY_T0000723;Name=TSPY3
HG002_chrY	CAT	exon	9207266	9207797	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000723;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000723;transcript_name=HG002_chrY_T0000723;gene_name=TSPY3;ID=exon:HG002_chrY_T0000723:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9207312	9207797	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000723;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000723;transcript_name=HG002_chrY_T0000723;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000723:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9207312	9207314	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000723;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000723;transcript_name=HG002_chrY_T0000723;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000723;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9207798	9208404	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000723;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000723;transcript_name=HG002_chrY_T0000723;gene_name=TSPY3;ID=intron:HG002_chrY_T0000723:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9208405	9208482	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000723;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000723;transcript_name=HG002_chrY_T0000723;gene_name=TSPY3;ID=exon:HG002_chrY_T0000723:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9208405	9208482	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000723;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000723;transcript_name=HG002_chrY_T0000723;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000723:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9208483	9208610	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000723;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000723;transcript_name=HG002_chrY_T0000723;gene_name=TSPY3;ID=intron:HG002_chrY_T0000723:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9208611	9208722	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000723;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000723;transcript_name=HG002_chrY_T0000723;gene_name=TSPY3;ID=exon:HG002_chrY_T0000723:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9208611	9208722	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000723;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000723;transcript_name=HG002_chrY_T0000723;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000723:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9208723	9208823	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000723;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000723;transcript_name=HG002_chrY_T0000723;gene_name=TSPY3;ID=intron:HG002_chrY_T0000723:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9208824	9208969	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000723;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000723;transcript_name=HG002_chrY_T0000723;gene_name=TSPY3;ID=exon:HG002_chrY_T0000723:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9208824	9208969	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000723;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000723;transcript_name=HG002_chrY_T0000723;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000723:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9208970	9209075	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000723;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000723;transcript_name=HG002_chrY_T0000723;gene_name=TSPY3;ID=intron:HG002_chrY_T0000723:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9209076	9209157	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000723;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000723;transcript_name=HG002_chrY_T0000723;gene_name=TSPY3;ID=exon:HG002_chrY_T0000723:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9209076	9209157	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000723;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000723;transcript_name=HG002_chrY_T0000723;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000723:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9209158	9209851	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000723;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000723;transcript_name=HG002_chrY_T0000723;gene_name=TSPY3;ID=intron:HG002_chrY_T0000723:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9209852	9210062	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000723;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000723;transcript_name=HG002_chrY_T0000723;gene_name=TSPY3;ID=exon:HG002_chrY_T0000723:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9209852	9209874	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000723;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000723;transcript_name=HG002_chrY_T0000723;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000723:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9209872	9209874	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000723;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000723;transcript_name=HG002_chrY_T0000723;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000723;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9207312	9210061	100	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000724;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_G0000218;transcript_name=HG002_chrY_T0000724;gene_name=TSPY3;ID=HG002_chrY_T0000724;Name=TSPY3
HG002_chrY	CAT	exon	9207312	9207797	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000724;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000724;transcript_name=HG002_chrY_T0000724;gene_name=TSPY3;ID=exon:HG002_chrY_T0000724:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9207312	9207797	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000724;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000724;transcript_name=HG002_chrY_T0000724;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000724:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9207312	9207314	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000724;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000724;transcript_name=HG002_chrY_T0000724;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000724;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9207798	9208404	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000724;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000724;transcript_name=HG002_chrY_T0000724;gene_name=TSPY3;ID=intron:HG002_chrY_T0000724:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9208405	9208482	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000724;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000724;transcript_name=HG002_chrY_T0000724;gene_name=TSPY3;ID=exon:HG002_chrY_T0000724:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9208405	9208482	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000724;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000724;transcript_name=HG002_chrY_T0000724;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000724:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9208483	9208610	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000724;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000724;transcript_name=HG002_chrY_T0000724;gene_name=TSPY3;ID=intron:HG002_chrY_T0000724:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9208611	9208722	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000724;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000724;transcript_name=HG002_chrY_T0000724;gene_name=TSPY3;ID=exon:HG002_chrY_T0000724:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9208611	9208722	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000724;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000724;transcript_name=HG002_chrY_T0000724;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000724:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9208723	9208823	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000724;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000724;transcript_name=HG002_chrY_T0000724;gene_name=TSPY3;ID=intron:HG002_chrY_T0000724:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9208824	9208969	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000724;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000724;transcript_name=HG002_chrY_T0000724;gene_name=TSPY3;ID=exon:HG002_chrY_T0000724:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9208824	9208969	.	+	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000724;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000724;transcript_name=HG002_chrY_T0000724;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000724:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9208970	9209064	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000724;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000724;transcript_name=HG002_chrY_T0000724;gene_name=TSPY3;ID=intron:HG002_chrY_T0000724:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9209065	9209157	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000724;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000724;transcript_name=HG002_chrY_T0000724;gene_name=TSPY3;ID=exon:HG002_chrY_T0000724:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9209065	9209127	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000724;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000724;transcript_name=HG002_chrY_T0000724;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000724:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9209125	9209127	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000724;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000724;transcript_name=HG002_chrY_T0000724;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000724;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9209158	9209851	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000724;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000724;transcript_name=HG002_chrY_T0000724;gene_name=TSPY3;ID=intron:HG002_chrY_T0000724:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9209852	9210061	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000724;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000724;transcript_name=HG002_chrY_T0000724;gene_name=TSPY3;ID=exon:HG002_chrY_T0000724:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9207312	9209874	100	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000725;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_G0000218;transcript_name=HG002_chrY_T0000725;gene_name=TSPY3;ID=HG002_chrY_T0000725;Name=TSPY3
HG002_chrY	CAT	exon	9207312	9207398	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000725;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000725;transcript_name=HG002_chrY_T0000725;gene_name=TSPY3;ID=exon:HG002_chrY_T0000725:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9207312	9207398	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000725;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000725;transcript_name=HG002_chrY_T0000725;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000725:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9207312	9207314	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000725;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000725;transcript_name=HG002_chrY_T0000725;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000725;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9207399	9207659	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000725;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000725;transcript_name=HG002_chrY_T0000725;gene_name=TSPY3;ID=intron:HG002_chrY_T0000725:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9207660	9207797	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000725;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000725;transcript_name=HG002_chrY_T0000725;gene_name=TSPY3;ID=exon:HG002_chrY_T0000725:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9207660	9207797	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000725;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000725;transcript_name=HG002_chrY_T0000725;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000725:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9207798	9208404	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000725;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000725;transcript_name=HG002_chrY_T0000725;gene_name=TSPY3;ID=intron:HG002_chrY_T0000725:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9208405	9208482	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000725;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000725;transcript_name=HG002_chrY_T0000725;gene_name=TSPY3;ID=exon:HG002_chrY_T0000725:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9208405	9208482	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000725;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000725;transcript_name=HG002_chrY_T0000725;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000725:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9208483	9208610	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000725;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000725;transcript_name=HG002_chrY_T0000725;gene_name=TSPY3;ID=intron:HG002_chrY_T0000725:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9208611	9208722	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000725;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000725;transcript_name=HG002_chrY_T0000725;gene_name=TSPY3;ID=exon:HG002_chrY_T0000725:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9208611	9208722	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000725;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000725;transcript_name=HG002_chrY_T0000725;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000725:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9208723	9208823	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000725;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000725;transcript_name=HG002_chrY_T0000725;gene_name=TSPY3;ID=intron:HG002_chrY_T0000725:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9208824	9208969	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000725;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000725;transcript_name=HG002_chrY_T0000725;gene_name=TSPY3;ID=exon:HG002_chrY_T0000725:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9208824	9208969	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000725;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000725;transcript_name=HG002_chrY_T0000725;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000725:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9208970	9209075	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000725;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000725;transcript_name=HG002_chrY_T0000725;gene_name=TSPY3;ID=intron:HG002_chrY_T0000725:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9209076	9209157	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000725;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000725;transcript_name=HG002_chrY_T0000725;gene_name=TSPY3;ID=exon:HG002_chrY_T0000725:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9209076	9209157	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000725;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000725;transcript_name=HG002_chrY_T0000725;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000725:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9209158	9209851	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000725;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000725;transcript_name=HG002_chrY_T0000725;gene_name=TSPY3;ID=intron:HG002_chrY_T0000725:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9209852	9209874	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000725;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000725;transcript_name=HG002_chrY_T0000725;gene_name=TSPY3;ID=exon:HG002_chrY_T0000725:6;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9209852	9209874	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000725;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000725;transcript_name=HG002_chrY_T0000725;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000725:6;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9209872	9209874	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000725;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000725;transcript_name=HG002_chrY_T0000725;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000725;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9207312	9210068	1000	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000726;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_G0000218;transcript_name=HG002_chrY_T0000726;gene_name=TSPY3;ID=HG002_chrY_T0000726;Name=TSPY3
HG002_chrY	CAT	exon	9207312	9207797	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000726;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000726;transcript_name=HG002_chrY_T0000726;gene_name=TSPY3;ID=exon:HG002_chrY_T0000726:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9207798	9208404	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000726;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000726;transcript_name=HG002_chrY_T0000726;gene_name=TSPY3;ID=intron:HG002_chrY_T0000726:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9208405	9208482	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000726;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000726;transcript_name=HG002_chrY_T0000726;gene_name=TSPY3;ID=exon:HG002_chrY_T0000726:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9208483	9208610	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000726;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000726;transcript_name=HG002_chrY_T0000726;gene_name=TSPY3;ID=intron:HG002_chrY_T0000726:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9208611	9209157	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000726;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000726;transcript_name=HG002_chrY_T0000726;gene_name=TSPY3;ID=exon:HG002_chrY_T0000726:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9209158	9209284	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000726;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000726;transcript_name=HG002_chrY_T0000726;gene_name=TSPY3;ID=intron:HG002_chrY_T0000726:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9209285	9210068	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000726;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000726;transcript_name=HG002_chrY_T0000726;gene_name=TSPY3;ID=exon:HG002_chrY_T0000726:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9208672	9210053	1000	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000727;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_G0000218;transcript_name=HG002_chrY_T0000727;gene_name=TSPY3;ID=HG002_chrY_T0000727;Name=TSPY3
HG002_chrY	CAT	exon	9208672	9208969	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000727;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000727;transcript_name=HG002_chrY_T0000727;gene_name=TSPY3;ID=exon:HG002_chrY_T0000727:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9208970	9209064	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000727;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000727;transcript_name=HG002_chrY_T0000727;gene_name=TSPY3;ID=intron:HG002_chrY_T0000727:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9209065	9209157	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000727;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000727;transcript_name=HG002_chrY_T0000727;gene_name=TSPY3;ID=exon:HG002_chrY_T0000727:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9209158	9209851	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000727;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000727;transcript_name=HG002_chrY_T0000727;gene_name=TSPY3;ID=intron:HG002_chrY_T0000727:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9209852	9210053	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000727;gene_id=HG002_chrY_G0000218;Parent=HG002_chrY_T0000727;transcript_name=HG002_chrY_T0000727;gene_name=TSPY3;ID=exon:HG002_chrY_T0000727:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9217266	9224952	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1_3;gene_id=HG002_chrY_G0000219;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG002_chrY_G0000219;Name=FAM197Y9
HG002_chrY	CAT	transcript	9217266	9224952	1000	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000728;gene_id=HG002_chrY_G0000219;Parent=HG002_chrY_G0000219;transcript_name=HG002_chrY_T0000728;gene_name=FAM197Y9;ID=HG002_chrY_T0000728;Name=FAM197Y9
HG002_chrY	CAT	exon	9217266	9219393	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000728;gene_id=HG002_chrY_G0000219;Parent=HG002_chrY_T0000728;transcript_name=HG002_chrY_T0000728;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000728:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9219394	9222941	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000728;gene_id=HG002_chrY_G0000219;Parent=HG002_chrY_T0000728;transcript_name=HG002_chrY_T0000728;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000728:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9222942	9223027	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000728;gene_id=HG002_chrY_G0000219;Parent=HG002_chrY_T0000728;transcript_name=HG002_chrY_T0000728;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000728:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9223028	9224832	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000728;gene_id=HG002_chrY_G0000219;Parent=HG002_chrY_T0000728;transcript_name=HG002_chrY_T0000728;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000728:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9224833	9224952	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000728;gene_id=HG002_chrY_G0000219;Parent=HG002_chrY_T0000728;transcript_name=HG002_chrY_T0000728;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000728:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9219334	9224934	1000	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000729;gene_id=HG002_chrY_G0000219;Parent=HG002_chrY_G0000219;transcript_name=HG002_chrY_T0000729;gene_name=FAM197Y9;ID=HG002_chrY_T0000729;Name=FAM197Y9
HG002_chrY	CAT	exon	9219334	9219393	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000729;gene_id=HG002_chrY_G0000219;Parent=HG002_chrY_T0000729;transcript_name=HG002_chrY_T0000729;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000729:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9219394	9222941	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000729;gene_id=HG002_chrY_G0000219;Parent=HG002_chrY_T0000729;transcript_name=HG002_chrY_T0000729;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000729:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9222942	9223100	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000729;gene_id=HG002_chrY_G0000219;Parent=HG002_chrY_T0000729;transcript_name=HG002_chrY_T0000729;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000729:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9223101	9224600	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000729;gene_id=HG002_chrY_G0000219;Parent=HG002_chrY_T0000729;transcript_name=HG002_chrY_T0000729;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000729:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9224601	9224746	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000729;gene_id=HG002_chrY_G0000219;Parent=HG002_chrY_T0000729;transcript_name=HG002_chrY_T0000729;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000729:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9224747	9224832	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000729;gene_id=HG002_chrY_G0000219;Parent=HG002_chrY_T0000729;transcript_name=HG002_chrY_T0000729;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000729:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9224833	9224934	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000729;gene_id=HG002_chrY_G0000219;Parent=HG002_chrY_T0000729;transcript_name=HG002_chrY_T0000729;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000729:3;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9224601	9226594	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9_5;gene_id=HG002_chrY_G0000220;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG002_chrY_G0000220;Name=FAM197Y9
HG002_chrY	CAT	transcript	9224601	9226594	1000	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000730;gene_id=HG002_chrY_G0000220;Parent=HG002_chrY_G0000220;transcript_name=HG002_chrY_T0000730;gene_name=FAM197Y9;ID=HG002_chrY_T0000730;Name=FAM197Y9
HG002_chrY	CAT	exon	9224601	9224746	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000730;gene_id=HG002_chrY_G0000220;Parent=HG002_chrY_T0000730;transcript_name=HG002_chrY_T0000730;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000730:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9224747	9224858	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000730;gene_id=HG002_chrY_G0000220;Parent=HG002_chrY_T0000730;transcript_name=HG002_chrY_T0000730;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000730:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9224859	9224942	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000730;gene_id=HG002_chrY_G0000220;Parent=HG002_chrY_T0000730;transcript_name=HG002_chrY_T0000730;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000730:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9224943	9226284	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000730;gene_id=HG002_chrY_G0000220;Parent=HG002_chrY_T0000730;transcript_name=HG002_chrY_T0000730;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000730:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9226285	9226594	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000730;gene_id=HG002_chrY_G0000220;Parent=HG002_chrY_T0000730;transcript_name=HG002_chrY_T0000730;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000730:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9227543	9230339	.	+	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;gene_id=HG002_chrY_G0000221;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=HG002_chrY_G0000221;Name=TSPY3
HG002_chrY	CAT	transcript	9227543	9230339	100	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000731;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_G0000221;transcript_name=HG002_chrY_T0000731;gene_name=TSPY3;ID=HG002_chrY_T0000731;Name=TSPY3
HG002_chrY	CAT	exon	9227543	9228074	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000731;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000731;transcript_name=HG002_chrY_T0000731;gene_name=TSPY3;ID=exon:HG002_chrY_T0000731:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9227589	9228074	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000731;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000731;transcript_name=HG002_chrY_T0000731;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000731:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9227589	9227591	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000731;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000731;transcript_name=HG002_chrY_T0000731;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000731;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9228075	9228681	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000731;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000731;transcript_name=HG002_chrY_T0000731;gene_name=TSPY3;ID=intron:HG002_chrY_T0000731:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9228682	9228759	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000731;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000731;transcript_name=HG002_chrY_T0000731;gene_name=TSPY3;ID=exon:HG002_chrY_T0000731:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9228682	9228759	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000731;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000731;transcript_name=HG002_chrY_T0000731;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000731:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9228760	9228887	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000731;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000731;transcript_name=HG002_chrY_T0000731;gene_name=TSPY3;ID=intron:HG002_chrY_T0000731:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9228888	9228999	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000731;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000731;transcript_name=HG002_chrY_T0000731;gene_name=TSPY3;ID=exon:HG002_chrY_T0000731:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9228888	9228999	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000731;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000731;transcript_name=HG002_chrY_T0000731;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000731:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9229000	9229100	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000731;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000731;transcript_name=HG002_chrY_T0000731;gene_name=TSPY3;ID=intron:HG002_chrY_T0000731:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9229101	9229246	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000731;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000731;transcript_name=HG002_chrY_T0000731;gene_name=TSPY3;ID=exon:HG002_chrY_T0000731:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9229101	9229246	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000731;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000731;transcript_name=HG002_chrY_T0000731;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000731:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9229247	9229352	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000731;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000731;transcript_name=HG002_chrY_T0000731;gene_name=TSPY3;ID=intron:HG002_chrY_T0000731:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9229353	9229434	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000731;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000731;transcript_name=HG002_chrY_T0000731;gene_name=TSPY3;ID=exon:HG002_chrY_T0000731:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9229353	9229434	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000731;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000731;transcript_name=HG002_chrY_T0000731;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000731:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9229435	9230128	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000731;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000731;transcript_name=HG002_chrY_T0000731;gene_name=TSPY3;ID=intron:HG002_chrY_T0000731:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9230129	9230339	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000731;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000731;transcript_name=HG002_chrY_T0000731;gene_name=TSPY3;ID=exon:HG002_chrY_T0000731:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9230129	9230151	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000731;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000731;transcript_name=HG002_chrY_T0000731;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000731:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9230149	9230151	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000731;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000731;transcript_name=HG002_chrY_T0000731;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000731;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9227589	9230338	100	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000732;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_G0000221;transcript_name=HG002_chrY_T0000732;gene_name=TSPY3;ID=HG002_chrY_T0000732;Name=TSPY3
HG002_chrY	CAT	exon	9227589	9228074	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000732;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000732;transcript_name=HG002_chrY_T0000732;gene_name=TSPY3;ID=exon:HG002_chrY_T0000732:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9227589	9228074	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000732;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000732;transcript_name=HG002_chrY_T0000732;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000732:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9227589	9227591	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000732;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000732;transcript_name=HG002_chrY_T0000732;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000732;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9228075	9228681	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000732;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000732;transcript_name=HG002_chrY_T0000732;gene_name=TSPY3;ID=intron:HG002_chrY_T0000732:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9228682	9228759	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000732;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000732;transcript_name=HG002_chrY_T0000732;gene_name=TSPY3;ID=exon:HG002_chrY_T0000732:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9228682	9228759	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000732;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000732;transcript_name=HG002_chrY_T0000732;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000732:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9228760	9228887	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000732;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000732;transcript_name=HG002_chrY_T0000732;gene_name=TSPY3;ID=intron:HG002_chrY_T0000732:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9228888	9228999	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000732;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000732;transcript_name=HG002_chrY_T0000732;gene_name=TSPY3;ID=exon:HG002_chrY_T0000732:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9228888	9228999	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000732;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000732;transcript_name=HG002_chrY_T0000732;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000732:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9229000	9229100	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000732;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000732;transcript_name=HG002_chrY_T0000732;gene_name=TSPY3;ID=intron:HG002_chrY_T0000732:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9229101	9229246	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000732;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000732;transcript_name=HG002_chrY_T0000732;gene_name=TSPY3;ID=exon:HG002_chrY_T0000732:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9229101	9229246	.	+	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000732;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000732;transcript_name=HG002_chrY_T0000732;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000732:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9229247	9229341	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000732;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000732;transcript_name=HG002_chrY_T0000732;gene_name=TSPY3;ID=intron:HG002_chrY_T0000732:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9229342	9229434	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000732;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000732;transcript_name=HG002_chrY_T0000732;gene_name=TSPY3;ID=exon:HG002_chrY_T0000732:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9229342	9229404	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000732;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000732;transcript_name=HG002_chrY_T0000732;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000732:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9229402	9229404	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000732;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000732;transcript_name=HG002_chrY_T0000732;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000732;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9229435	9230128	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000732;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000732;transcript_name=HG002_chrY_T0000732;gene_name=TSPY3;ID=intron:HG002_chrY_T0000732:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9230129	9230338	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000732;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000732;transcript_name=HG002_chrY_T0000732;gene_name=TSPY3;ID=exon:HG002_chrY_T0000732:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9227589	9230151	100	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000733;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_G0000221;transcript_name=HG002_chrY_T0000733;gene_name=TSPY3;ID=HG002_chrY_T0000733;Name=TSPY3
HG002_chrY	CAT	exon	9227589	9227675	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000733;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000733;transcript_name=HG002_chrY_T0000733;gene_name=TSPY3;ID=exon:HG002_chrY_T0000733:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9227589	9227675	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000733;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000733;transcript_name=HG002_chrY_T0000733;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000733:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9227589	9227591	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000733;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000733;transcript_name=HG002_chrY_T0000733;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000733;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9227676	9227936	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000733;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000733;transcript_name=HG002_chrY_T0000733;gene_name=TSPY3;ID=intron:HG002_chrY_T0000733:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9227937	9228074	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000733;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000733;transcript_name=HG002_chrY_T0000733;gene_name=TSPY3;ID=exon:HG002_chrY_T0000733:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9227937	9228074	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000733;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000733;transcript_name=HG002_chrY_T0000733;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000733:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9228075	9228681	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000733;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000733;transcript_name=HG002_chrY_T0000733;gene_name=TSPY3;ID=intron:HG002_chrY_T0000733:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9228682	9228759	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000733;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000733;transcript_name=HG002_chrY_T0000733;gene_name=TSPY3;ID=exon:HG002_chrY_T0000733:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9228682	9228759	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000733;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000733;transcript_name=HG002_chrY_T0000733;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000733:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9228760	9228887	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000733;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000733;transcript_name=HG002_chrY_T0000733;gene_name=TSPY3;ID=intron:HG002_chrY_T0000733:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9228888	9228999	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000733;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000733;transcript_name=HG002_chrY_T0000733;gene_name=TSPY3;ID=exon:HG002_chrY_T0000733:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9228888	9228999	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000733;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000733;transcript_name=HG002_chrY_T0000733;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000733:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9229000	9229100	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000733;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000733;transcript_name=HG002_chrY_T0000733;gene_name=TSPY3;ID=intron:HG002_chrY_T0000733:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9229101	9229246	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000733;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000733;transcript_name=HG002_chrY_T0000733;gene_name=TSPY3;ID=exon:HG002_chrY_T0000733:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9229101	9229246	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000733;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000733;transcript_name=HG002_chrY_T0000733;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000733:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9229247	9229352	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000733;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000733;transcript_name=HG002_chrY_T0000733;gene_name=TSPY3;ID=intron:HG002_chrY_T0000733:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9229353	9229434	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000733;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000733;transcript_name=HG002_chrY_T0000733;gene_name=TSPY3;ID=exon:HG002_chrY_T0000733:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9229353	9229434	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000733;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000733;transcript_name=HG002_chrY_T0000733;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000733:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9229435	9230128	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000733;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000733;transcript_name=HG002_chrY_T0000733;gene_name=TSPY3;ID=intron:HG002_chrY_T0000733:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9230129	9230151	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000733;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000733;transcript_name=HG002_chrY_T0000733;gene_name=TSPY3;ID=exon:HG002_chrY_T0000733:6;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9230129	9230151	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000733;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000733;transcript_name=HG002_chrY_T0000733;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000733:6;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9230149	9230151	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000733;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000733;transcript_name=HG002_chrY_T0000733;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000733;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9227589	9230345	1000	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000734;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_G0000221;transcript_name=HG002_chrY_T0000734;gene_name=TSPY3;ID=HG002_chrY_T0000734;Name=TSPY3
HG002_chrY	CAT	exon	9227589	9228074	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000734;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000734;transcript_name=HG002_chrY_T0000734;gene_name=TSPY3;ID=exon:HG002_chrY_T0000734:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9228075	9228681	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000734;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000734;transcript_name=HG002_chrY_T0000734;gene_name=TSPY3;ID=intron:HG002_chrY_T0000734:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9228682	9228759	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000734;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000734;transcript_name=HG002_chrY_T0000734;gene_name=TSPY3;ID=exon:HG002_chrY_T0000734:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9228760	9228887	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000734;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000734;transcript_name=HG002_chrY_T0000734;gene_name=TSPY3;ID=intron:HG002_chrY_T0000734:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9228888	9229434	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000734;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000734;transcript_name=HG002_chrY_T0000734;gene_name=TSPY3;ID=exon:HG002_chrY_T0000734:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9229435	9229561	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000734;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000734;transcript_name=HG002_chrY_T0000734;gene_name=TSPY3;ID=intron:HG002_chrY_T0000734:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9229562	9230345	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000734;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000734;transcript_name=HG002_chrY_T0000734;gene_name=TSPY3;ID=exon:HG002_chrY_T0000734:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9228949	9230330	1000	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000735;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_G0000221;transcript_name=HG002_chrY_T0000735;gene_name=TSPY3;ID=HG002_chrY_T0000735;Name=TSPY3
HG002_chrY	CAT	exon	9228949	9229246	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000735;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000735;transcript_name=HG002_chrY_T0000735;gene_name=TSPY3;ID=exon:HG002_chrY_T0000735:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9229247	9229341	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000735;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000735;transcript_name=HG002_chrY_T0000735;gene_name=TSPY3;ID=intron:HG002_chrY_T0000735:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9229342	9229434	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000735;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000735;transcript_name=HG002_chrY_T0000735;gene_name=TSPY3;ID=exon:HG002_chrY_T0000735:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9229435	9230128	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000735;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000735;transcript_name=HG002_chrY_T0000735;gene_name=TSPY3;ID=intron:HG002_chrY_T0000735:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9230129	9230330	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000735;gene_id=HG002_chrY_G0000221;Parent=HG002_chrY_T0000735;transcript_name=HG002_chrY_T0000735;gene_name=TSPY3;ID=exon:HG002_chrY_T0000735:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9239479	9245225	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=HG002_chrY_G0000222;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000222;Name=FAM197Y5
HG002_chrY	CAT	transcript	9239479	9245225	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000736;gene_id=HG002_chrY_G0000222;Parent=HG002_chrY_G0000222;transcript_name=HG002_chrY_T0000736;gene_name=FAM197Y5;ID=HG002_chrY_T0000736;Name=FAM197Y5
HG002_chrY	CAT	exon	9239479	9239668	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000736;gene_id=HG002_chrY_G0000222;Parent=HG002_chrY_T0000736;transcript_name=HG002_chrY_T0000736;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000736:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9239669	9243218	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000736;gene_id=HG002_chrY_G0000222;Parent=HG002_chrY_T0000736;transcript_name=HG002_chrY_T0000736;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000736:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9243219	9243304	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000736;gene_id=HG002_chrY_G0000222;Parent=HG002_chrY_T0000736;transcript_name=HG002_chrY_T0000736;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000736:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9243305	9245111	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000736;gene_id=HG002_chrY_G0000222;Parent=HG002_chrY_T0000736;transcript_name=HG002_chrY_T0000736;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000736:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9245112	9245225	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000736;gene_id=HG002_chrY_G0000222;Parent=HG002_chrY_T0000736;transcript_name=HG002_chrY_T0000736;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000736:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9239609	9245213	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000737;gene_id=HG002_chrY_G0000222;Parent=HG002_chrY_G0000222;transcript_name=HG002_chrY_T0000737;gene_name=FAM197Y5;ID=HG002_chrY_T0000737;Name=FAM197Y5
HG002_chrY	CAT	exon	9239609	9239668	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000737;gene_id=HG002_chrY_G0000222;Parent=HG002_chrY_T0000737;transcript_name=HG002_chrY_T0000737;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000737:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9239669	9243218	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000737;gene_id=HG002_chrY_G0000222;Parent=HG002_chrY_T0000737;transcript_name=HG002_chrY_T0000737;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000737:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9243219	9243377	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000737;gene_id=HG002_chrY_G0000222;Parent=HG002_chrY_T0000737;transcript_name=HG002_chrY_T0000737;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000737:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9243378	9244879	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000737;gene_id=HG002_chrY_G0000222;Parent=HG002_chrY_T0000737;transcript_name=HG002_chrY_T0000737;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000737:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9244880	9245025	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000737;gene_id=HG002_chrY_G0000222;Parent=HG002_chrY_T0000737;transcript_name=HG002_chrY_T0000737;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000737:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9245026	9245111	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000737;gene_id=HG002_chrY_G0000222;Parent=HG002_chrY_T0000737;transcript_name=HG002_chrY_T0000737;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000737:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9245112	9245213	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000737;gene_id=HG002_chrY_G0000222;Parent=HG002_chrY_T0000737;transcript_name=HG002_chrY_T0000737;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000737:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9244880	9246872	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_13;gene_id=HG002_chrY_G0000223;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000223;Name=FAM197Y5
HG002_chrY	CAT	transcript	9244880	9246872	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000738;gene_id=HG002_chrY_G0000223;Parent=HG002_chrY_G0000223;transcript_name=HG002_chrY_T0000738;gene_name=FAM197Y5;ID=HG002_chrY_T0000738;Name=FAM197Y5
HG002_chrY	CAT	exon	9244880	9245025	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000738;gene_id=HG002_chrY_G0000223;Parent=HG002_chrY_T0000738;transcript_name=HG002_chrY_T0000738;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000738:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9245026	9246561	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000738;gene_id=HG002_chrY_G0000223;Parent=HG002_chrY_T0000738;transcript_name=HG002_chrY_T0000738;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000738:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9246562	9246872	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000738;gene_id=HG002_chrY_G0000223;Parent=HG002_chrY_T0000738;transcript_name=HG002_chrY_T0000738;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000738:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9247826	9250622	.	+	.	source_gene_common_name=TSPY10;source_gene=ENSG00000236424.7;gene_id=HG002_chrY_G0000224;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG002_chrY_G0000224;Name=TSPY10
HG002_chrY	CAT	transcript	9247826	9250622	100	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000739;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_G0000224;transcript_name=HG002_chrY_T0000739;gene_name=TSPY10;ID=HG002_chrY_T0000739;Name=TSPY10
HG002_chrY	CAT	exon	9247826	9248357	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000739;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000739;transcript_name=HG002_chrY_T0000739;gene_name=TSPY10;ID=exon:HG002_chrY_T0000739:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9247872	9248357	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000739;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000739;transcript_name=HG002_chrY_T0000739;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000739:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9247872	9247874	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000739;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000739;transcript_name=HG002_chrY_T0000739;gene_name=TSPY10;ID=start_codon:HG002_chrY_T0000739;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9248358	9248964	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000739;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000739;transcript_name=HG002_chrY_T0000739;gene_name=TSPY10;ID=intron:HG002_chrY_T0000739:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9248965	9249042	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000739;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000739;transcript_name=HG002_chrY_T0000739;gene_name=TSPY10;ID=exon:HG002_chrY_T0000739:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9248965	9249042	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000739;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000739;transcript_name=HG002_chrY_T0000739;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000739:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9249043	9249170	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000739;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000739;transcript_name=HG002_chrY_T0000739;gene_name=TSPY10;ID=intron:HG002_chrY_T0000739:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9249171	9249282	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000739;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000739;transcript_name=HG002_chrY_T0000739;gene_name=TSPY10;ID=exon:HG002_chrY_T0000739:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9249171	9249282	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000739;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000739;transcript_name=HG002_chrY_T0000739;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000739:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9249283	9249383	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000739;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000739;transcript_name=HG002_chrY_T0000739;gene_name=TSPY10;ID=intron:HG002_chrY_T0000739:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9249384	9249529	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000739;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000739;transcript_name=HG002_chrY_T0000739;gene_name=TSPY10;ID=exon:HG002_chrY_T0000739:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9249384	9249529	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000739;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000739;transcript_name=HG002_chrY_T0000739;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000739:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9249530	9249635	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000739;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000739;transcript_name=HG002_chrY_T0000739;gene_name=TSPY10;ID=intron:HG002_chrY_T0000739:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9249636	9249717	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000739;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000739;transcript_name=HG002_chrY_T0000739;gene_name=TSPY10;ID=exon:HG002_chrY_T0000739:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9249636	9249717	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000739;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000739;transcript_name=HG002_chrY_T0000739;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000739:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9249718	9250411	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000739;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000739;transcript_name=HG002_chrY_T0000739;gene_name=TSPY10;ID=intron:HG002_chrY_T0000739:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9250412	9250622	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000739;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000739;transcript_name=HG002_chrY_T0000739;gene_name=TSPY10;ID=exon:HG002_chrY_T0000739:5;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9250412	9250434	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000739;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000739;transcript_name=HG002_chrY_T0000739;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000739:5;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9250432	9250434	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000739;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000739;transcript_name=HG002_chrY_T0000739;gene_name=TSPY10;ID=stop_codon:HG002_chrY_T0000739;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9247872	9250621	100	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000740;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_G0000224;transcript_name=HG002_chrY_T0000740;gene_name=TSPY10;ID=HG002_chrY_T0000740;Name=TSPY10
HG002_chrY	CAT	exon	9247872	9248357	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000740;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000740;transcript_name=HG002_chrY_T0000740;gene_name=TSPY10;ID=exon:HG002_chrY_T0000740:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9247872	9248357	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000740;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000740;transcript_name=HG002_chrY_T0000740;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000740:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9247872	9247874	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000740;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000740;transcript_name=HG002_chrY_T0000740;gene_name=TSPY10;ID=start_codon:HG002_chrY_T0000740;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9248358	9248964	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000740;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000740;transcript_name=HG002_chrY_T0000740;gene_name=TSPY10;ID=intron:HG002_chrY_T0000740:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9248965	9249042	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000740;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000740;transcript_name=HG002_chrY_T0000740;gene_name=TSPY10;ID=exon:HG002_chrY_T0000740:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9248965	9249042	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000740;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000740;transcript_name=HG002_chrY_T0000740;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000740:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9249043	9249170	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000740;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000740;transcript_name=HG002_chrY_T0000740;gene_name=TSPY10;ID=intron:HG002_chrY_T0000740:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9249171	9249282	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000740;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000740;transcript_name=HG002_chrY_T0000740;gene_name=TSPY10;ID=exon:HG002_chrY_T0000740:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9249171	9249282	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000740;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000740;transcript_name=HG002_chrY_T0000740;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000740:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9249283	9249383	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000740;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000740;transcript_name=HG002_chrY_T0000740;gene_name=TSPY10;ID=intron:HG002_chrY_T0000740:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9249384	9249529	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000740;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000740;transcript_name=HG002_chrY_T0000740;gene_name=TSPY10;ID=exon:HG002_chrY_T0000740:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9249384	9249529	.	+	2	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000740;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000740;transcript_name=HG002_chrY_T0000740;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000740:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9249530	9249624	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000740;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000740;transcript_name=HG002_chrY_T0000740;gene_name=TSPY10;ID=intron:HG002_chrY_T0000740:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9249625	9249717	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000740;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000740;transcript_name=HG002_chrY_T0000740;gene_name=TSPY10;ID=exon:HG002_chrY_T0000740:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9249625	9249687	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000740;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000740;transcript_name=HG002_chrY_T0000740;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000740:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9249685	9249687	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000740;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000740;transcript_name=HG002_chrY_T0000740;gene_name=TSPY10;ID=stop_codon:HG002_chrY_T0000740;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9249718	9250411	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000740;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000740;transcript_name=HG002_chrY_T0000740;gene_name=TSPY10;ID=intron:HG002_chrY_T0000740:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9250412	9250621	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000740;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000740;transcript_name=HG002_chrY_T0000740;gene_name=TSPY10;ID=exon:HG002_chrY_T0000740:5;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9247872	9250628	1000	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000741;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_G0000224;transcript_name=HG002_chrY_T0000741;gene_name=TSPY10;ID=HG002_chrY_T0000741;Name=TSPY10
HG002_chrY	CAT	exon	9247872	9248357	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000741;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000741;transcript_name=HG002_chrY_T0000741;gene_name=TSPY10;ID=exon:HG002_chrY_T0000741:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9248358	9248964	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000741;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000741;transcript_name=HG002_chrY_T0000741;gene_name=TSPY10;ID=intron:HG002_chrY_T0000741:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9248965	9249042	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000741;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000741;transcript_name=HG002_chrY_T0000741;gene_name=TSPY10;ID=exon:HG002_chrY_T0000741:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9249043	9249170	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000741;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000741;transcript_name=HG002_chrY_T0000741;gene_name=TSPY10;ID=intron:HG002_chrY_T0000741:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9249171	9249717	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000741;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000741;transcript_name=HG002_chrY_T0000741;gene_name=TSPY10;ID=exon:HG002_chrY_T0000741:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9249718	9249844	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000741;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000741;transcript_name=HG002_chrY_T0000741;gene_name=TSPY10;ID=intron:HG002_chrY_T0000741:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9249845	9250628	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000741;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000741;transcript_name=HG002_chrY_T0000741;gene_name=TSPY10;ID=exon:HG002_chrY_T0000741:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9249232	9250613	1000	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000742;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_G0000224;transcript_name=HG002_chrY_T0000742;gene_name=TSPY10;ID=HG002_chrY_T0000742;Name=TSPY10
HG002_chrY	CAT	exon	9249232	9249529	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000742;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000742;transcript_name=HG002_chrY_T0000742;gene_name=TSPY10;ID=exon:HG002_chrY_T0000742:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9249530	9249635	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000742;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000742;transcript_name=HG002_chrY_T0000742;gene_name=TSPY10;ID=intron:HG002_chrY_T0000742:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9249636	9249717	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000742;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000742;transcript_name=HG002_chrY_T0000742;gene_name=TSPY10;ID=exon:HG002_chrY_T0000742:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9249718	9250411	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000742;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000742;transcript_name=HG002_chrY_T0000742;gene_name=TSPY10;ID=intron:HG002_chrY_T0000742:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9250412	9250613	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000742;gene_id=HG002_chrY_G0000224;Parent=HG002_chrY_T0000742;transcript_name=HG002_chrY_T0000742;gene_name=TSPY10;ID=exon:HG002_chrY_T0000742:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9259753	9265488	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=HG002_chrY_G0000225;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000225;Name=FAM197Y5
HG002_chrY	CAT	transcript	9259753	9265488	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000743;gene_id=HG002_chrY_G0000225;Parent=HG002_chrY_G0000225;transcript_name=HG002_chrY_T0000743;gene_name=FAM197Y5;ID=HG002_chrY_T0000743;Name=FAM197Y5
HG002_chrY	CAT	exon	9259753	9259942	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000743;gene_id=HG002_chrY_G0000225;Parent=HG002_chrY_T0000743;transcript_name=HG002_chrY_T0000743;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000743:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9259943	9263491	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000743;gene_id=HG002_chrY_G0000225;Parent=HG002_chrY_T0000743;transcript_name=HG002_chrY_T0000743;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000743:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9263492	9263577	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000743;gene_id=HG002_chrY_G0000225;Parent=HG002_chrY_T0000743;transcript_name=HG002_chrY_T0000743;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000743:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9263578	9265374	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000743;gene_id=HG002_chrY_G0000225;Parent=HG002_chrY_T0000743;transcript_name=HG002_chrY_T0000743;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000743:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9265375	9265488	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000743;gene_id=HG002_chrY_G0000225;Parent=HG002_chrY_T0000743;transcript_name=HG002_chrY_T0000743;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000743:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9259883	9265476	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000744;gene_id=HG002_chrY_G0000225;Parent=HG002_chrY_G0000225;transcript_name=HG002_chrY_T0000744;gene_name=FAM197Y5;ID=HG002_chrY_T0000744;Name=FAM197Y5
HG002_chrY	CAT	exon	9259883	9259942	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000744;gene_id=HG002_chrY_G0000225;Parent=HG002_chrY_T0000744;transcript_name=HG002_chrY_T0000744;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000744:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9259943	9263491	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000744;gene_id=HG002_chrY_G0000225;Parent=HG002_chrY_T0000744;transcript_name=HG002_chrY_T0000744;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000744:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9263492	9263650	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000744;gene_id=HG002_chrY_G0000225;Parent=HG002_chrY_T0000744;transcript_name=HG002_chrY_T0000744;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000744:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9263651	9265142	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000744;gene_id=HG002_chrY_G0000225;Parent=HG002_chrY_T0000744;transcript_name=HG002_chrY_T0000744;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000744:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9265143	9265288	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000744;gene_id=HG002_chrY_G0000225;Parent=HG002_chrY_T0000744;transcript_name=HG002_chrY_T0000744;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000744:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9265289	9265374	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000744;gene_id=HG002_chrY_G0000225;Parent=HG002_chrY_T0000744;transcript_name=HG002_chrY_T0000744;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000744:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9265375	9265476	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000744;gene_id=HG002_chrY_G0000225;Parent=HG002_chrY_T0000744;transcript_name=HG002_chrY_T0000744;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000744:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9265143	9267135	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_14;gene_id=HG002_chrY_G0000226;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000226;Name=FAM197Y5
HG002_chrY	CAT	transcript	9265143	9267135	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_14;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_14;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000745;gene_id=HG002_chrY_G0000226;Parent=HG002_chrY_G0000226;transcript_name=HG002_chrY_T0000745;gene_name=FAM197Y5;ID=HG002_chrY_T0000745;Name=FAM197Y5
HG002_chrY	CAT	exon	9265143	9265288	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_14;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_14;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000745;gene_id=HG002_chrY_G0000226;Parent=HG002_chrY_T0000745;transcript_name=HG002_chrY_T0000745;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000745:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9265289	9266824	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_14;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_14;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000745;gene_id=HG002_chrY_G0000226;Parent=HG002_chrY_T0000745;transcript_name=HG002_chrY_T0000745;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000745:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9266825	9267135	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_14;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_14;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000745;gene_id=HG002_chrY_G0000226;Parent=HG002_chrY_T0000745;transcript_name=HG002_chrY_T0000745;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000745:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9268089	9270903	.	+	.	source_gene_common_name=TSPY4;source_gene=ENSG00000233803.9;gene_id=HG002_chrY_G0000227;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG002_chrY_G0000227;Name=TSPY4
HG002_chrY	CAT	transcript	9268089	9270782	100	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000746;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_G0000227;transcript_name=HG002_chrY_T0000746;gene_name=TSPY4;ID=HG002_chrY_T0000746;Name=TSPY4
HG002_chrY	CAT	exon	9268089	9268221	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000746;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000746;transcript_name=HG002_chrY_T0000746;gene_name=TSPY4;ID=exon:HG002_chrY_T0000746:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9268135	9268221	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000746;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000746;transcript_name=HG002_chrY_T0000746;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000746:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9268135	9268137	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000746;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000746;transcript_name=HG002_chrY_T0000746;gene_name=TSPY4;ID=start_codon:HG002_chrY_T0000746;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9268222	9268500	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000746;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000746;transcript_name=HG002_chrY_T0000746;gene_name=TSPY4;ID=intron:HG002_chrY_T0000746:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9268501	9268638	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000746;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000746;transcript_name=HG002_chrY_T0000746;gene_name=TSPY4;ID=exon:HG002_chrY_T0000746:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9268501	9268638	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000746;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000746;transcript_name=HG002_chrY_T0000746;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000746:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9268639	9269245	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000746;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000746;transcript_name=HG002_chrY_T0000746;gene_name=TSPY4;ID=intron:HG002_chrY_T0000746:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9269246	9269323	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000746;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000746;transcript_name=HG002_chrY_T0000746;gene_name=TSPY4;ID=exon:HG002_chrY_T0000746:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9269246	9269323	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000746;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000746;transcript_name=HG002_chrY_T0000746;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000746:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9269324	9269451	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000746;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000746;transcript_name=HG002_chrY_T0000746;gene_name=TSPY4;ID=intron:HG002_chrY_T0000746:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9269452	9269563	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000746;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000746;transcript_name=HG002_chrY_T0000746;gene_name=TSPY4;ID=exon:HG002_chrY_T0000746:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9269452	9269563	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000746;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000746;transcript_name=HG002_chrY_T0000746;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000746:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9269564	9269664	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000746;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000746;transcript_name=HG002_chrY_T0000746;gene_name=TSPY4;ID=intron:HG002_chrY_T0000746:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9269665	9269810	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000746;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000746;transcript_name=HG002_chrY_T0000746;gene_name=TSPY4;ID=exon:HG002_chrY_T0000746:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9269665	9269810	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000746;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000746;transcript_name=HG002_chrY_T0000746;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000746:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9269811	9269916	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000746;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000746;transcript_name=HG002_chrY_T0000746;gene_name=TSPY4;ID=intron:HG002_chrY_T0000746:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9269917	9269998	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000746;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000746;transcript_name=HG002_chrY_T0000746;gene_name=TSPY4;ID=exon:HG002_chrY_T0000746:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9269917	9269998	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000746;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000746;transcript_name=HG002_chrY_T0000746;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000746:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9269999	9270692	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000746;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000746;transcript_name=HG002_chrY_T0000746;gene_name=TSPY4;ID=intron:HG002_chrY_T0000746:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9270693	9270782	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000746;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000746;transcript_name=HG002_chrY_T0000746;gene_name=TSPY4;ID=exon:HG002_chrY_T0000746:6;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9270693	9270715	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000746;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000746;transcript_name=HG002_chrY_T0000746;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000746:6;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9270713	9270715	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000746;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000746;transcript_name=HG002_chrY_T0000746;gene_name=TSPY4;ID=stop_codon:HG002_chrY_T0000746;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9268089	9270903	100	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000747;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_G0000227;transcript_name=HG002_chrY_T0000747;gene_name=TSPY4;ID=HG002_chrY_T0000747;Name=TSPY4
HG002_chrY	CAT	exon	9268089	9268638	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000747;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000747;transcript_name=HG002_chrY_T0000747;gene_name=TSPY4;ID=exon:HG002_chrY_T0000747:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9268135	9268638	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000747;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000747;transcript_name=HG002_chrY_T0000747;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000747:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9268135	9268137	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000747;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000747;transcript_name=HG002_chrY_T0000747;gene_name=TSPY4;ID=start_codon:HG002_chrY_T0000747;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9268639	9269245	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000747;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000747;transcript_name=HG002_chrY_T0000747;gene_name=TSPY4;ID=intron:HG002_chrY_T0000747:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9269246	9269323	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000747;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000747;transcript_name=HG002_chrY_T0000747;gene_name=TSPY4;ID=exon:HG002_chrY_T0000747:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9269246	9269323	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000747;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000747;transcript_name=HG002_chrY_T0000747;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000747:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9269324	9269451	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000747;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000747;transcript_name=HG002_chrY_T0000747;gene_name=TSPY4;ID=intron:HG002_chrY_T0000747:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9269452	9269563	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000747;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000747;transcript_name=HG002_chrY_T0000747;gene_name=TSPY4;ID=exon:HG002_chrY_T0000747:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9269452	9269563	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000747;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000747;transcript_name=HG002_chrY_T0000747;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000747:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9269564	9269664	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000747;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000747;transcript_name=HG002_chrY_T0000747;gene_name=TSPY4;ID=intron:HG002_chrY_T0000747:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9269665	9269810	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000747;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000747;transcript_name=HG002_chrY_T0000747;gene_name=TSPY4;ID=exon:HG002_chrY_T0000747:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9269665	9269810	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000747;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000747;transcript_name=HG002_chrY_T0000747;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000747:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9269811	9269916	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000747;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000747;transcript_name=HG002_chrY_T0000747;gene_name=TSPY4;ID=intron:HG002_chrY_T0000747:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9269917	9269998	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000747;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000747;transcript_name=HG002_chrY_T0000747;gene_name=TSPY4;ID=exon:HG002_chrY_T0000747:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9269917	9269998	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000747;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000747;transcript_name=HG002_chrY_T0000747;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000747:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9269999	9270692	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000747;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000747;transcript_name=HG002_chrY_T0000747;gene_name=TSPY4;ID=intron:HG002_chrY_T0000747:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9270693	9270903	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000747;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000747;transcript_name=HG002_chrY_T0000747;gene_name=TSPY4;ID=exon:HG002_chrY_T0000747:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9270693	9270715	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000747;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000747;transcript_name=HG002_chrY_T0000747;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000747:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9270713	9270715	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000747;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000747;transcript_name=HG002_chrY_T0000747;gene_name=TSPY4;ID=stop_codon:HG002_chrY_T0000747;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9268135	9270902	100	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000748;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_G0000227;transcript_name=HG002_chrY_T0000748;gene_name=TSPY4;ID=HG002_chrY_T0000748;Name=TSPY4
HG002_chrY	CAT	exon	9268135	9268638	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000748;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000748;transcript_name=HG002_chrY_T0000748;gene_name=TSPY4;ID=exon:HG002_chrY_T0000748:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9268135	9268638	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000748;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000748;transcript_name=HG002_chrY_T0000748;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000748:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9268135	9268137	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000748;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000748;transcript_name=HG002_chrY_T0000748;gene_name=TSPY4;ID=start_codon:HG002_chrY_T0000748;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9268639	9269245	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000748;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000748;transcript_name=HG002_chrY_T0000748;gene_name=TSPY4;ID=intron:HG002_chrY_T0000748:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9269246	9269323	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000748;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000748;transcript_name=HG002_chrY_T0000748;gene_name=TSPY4;ID=exon:HG002_chrY_T0000748:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9269246	9269323	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000748;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000748;transcript_name=HG002_chrY_T0000748;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000748:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9269324	9269451	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000748;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000748;transcript_name=HG002_chrY_T0000748;gene_name=TSPY4;ID=intron:HG002_chrY_T0000748:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9269452	9269563	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000748;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000748;transcript_name=HG002_chrY_T0000748;gene_name=TSPY4;ID=exon:HG002_chrY_T0000748:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9269452	9269563	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000748;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000748;transcript_name=HG002_chrY_T0000748;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000748:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9269564	9269664	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000748;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000748;transcript_name=HG002_chrY_T0000748;gene_name=TSPY4;ID=intron:HG002_chrY_T0000748:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9269665	9269810	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000748;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000748;transcript_name=HG002_chrY_T0000748;gene_name=TSPY4;ID=exon:HG002_chrY_T0000748:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9269665	9269810	.	+	2	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000748;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000748;transcript_name=HG002_chrY_T0000748;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000748:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9269811	9269905	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000748;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000748;transcript_name=HG002_chrY_T0000748;gene_name=TSPY4;ID=intron:HG002_chrY_T0000748:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9269906	9269998	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000748;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000748;transcript_name=HG002_chrY_T0000748;gene_name=TSPY4;ID=exon:HG002_chrY_T0000748:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9269906	9269968	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000748;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000748;transcript_name=HG002_chrY_T0000748;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000748:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9269966	9269968	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000748;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000748;transcript_name=HG002_chrY_T0000748;gene_name=TSPY4;ID=stop_codon:HG002_chrY_T0000748;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9269999	9270692	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000748;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000748;transcript_name=HG002_chrY_T0000748;gene_name=TSPY4;ID=intron:HG002_chrY_T0000748:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9270693	9270902	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000748;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000748;transcript_name=HG002_chrY_T0000748;gene_name=TSPY4;ID=exon:HG002_chrY_T0000748:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9268135	9270909	1000	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000749;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_G0000227;transcript_name=HG002_chrY_T0000749;gene_name=TSPY4;ID=HG002_chrY_T0000749;Name=TSPY4
HG002_chrY	CAT	exon	9268135	9268638	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000749;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000749;transcript_name=HG002_chrY_T0000749;gene_name=TSPY4;ID=exon:HG002_chrY_T0000749:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9268639	9269245	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000749;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000749;transcript_name=HG002_chrY_T0000749;gene_name=TSPY4;ID=intron:HG002_chrY_T0000749:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9269246	9269323	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000749;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000749;transcript_name=HG002_chrY_T0000749;gene_name=TSPY4;ID=exon:HG002_chrY_T0000749:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9269324	9269451	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000749;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000749;transcript_name=HG002_chrY_T0000749;gene_name=TSPY4;ID=intron:HG002_chrY_T0000749:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9269452	9269998	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000749;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000749;transcript_name=HG002_chrY_T0000749;gene_name=TSPY4;ID=exon:HG002_chrY_T0000749:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9269999	9270125	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000749;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000749;transcript_name=HG002_chrY_T0000749;gene_name=TSPY4;ID=intron:HG002_chrY_T0000749:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9270126	9270909	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000749;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000749;transcript_name=HG002_chrY_T0000749;gene_name=TSPY4;ID=exon:HG002_chrY_T0000749:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9269513	9270894	1000	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000750;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_G0000227;transcript_name=HG002_chrY_T0000750;gene_name=TSPY4;ID=HG002_chrY_T0000750;Name=TSPY4
HG002_chrY	CAT	exon	9269513	9269810	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000750;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000750;transcript_name=HG002_chrY_T0000750;gene_name=TSPY4;ID=exon:HG002_chrY_T0000750:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9269811	9269905	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000750;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000750;transcript_name=HG002_chrY_T0000750;gene_name=TSPY4;ID=intron:HG002_chrY_T0000750:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9269906	9269998	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000750;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000750;transcript_name=HG002_chrY_T0000750;gene_name=TSPY4;ID=exon:HG002_chrY_T0000750:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9269999	9270692	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000750;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000750;transcript_name=HG002_chrY_T0000750;gene_name=TSPY4;ID=intron:HG002_chrY_T0000750:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9270693	9270894	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000750;gene_id=HG002_chrY_G0000227;Parent=HG002_chrY_T0000750;transcript_name=HG002_chrY_T0000750;gene_name=TSPY4;ID=exon:HG002_chrY_T0000750:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9280062	9285801	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=HG002_chrY_G0000228;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000228;Name=FAM197Y5
HG002_chrY	CAT	transcript	9280062	9285801	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000751;gene_id=HG002_chrY_G0000228;Parent=HG002_chrY_G0000228;transcript_name=HG002_chrY_T0000751;gene_name=FAM197Y5;ID=HG002_chrY_T0000751;Name=FAM197Y5
HG002_chrY	CAT	exon	9280062	9280251	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000751;gene_id=HG002_chrY_G0000228;Parent=HG002_chrY_T0000751;transcript_name=HG002_chrY_T0000751;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000751:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9280252	9283800	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000751;gene_id=HG002_chrY_G0000228;Parent=HG002_chrY_T0000751;transcript_name=HG002_chrY_T0000751;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000751:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9283801	9283886	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000751;gene_id=HG002_chrY_G0000228;Parent=HG002_chrY_T0000751;transcript_name=HG002_chrY_T0000751;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000751:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9283887	9285687	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000751;gene_id=HG002_chrY_G0000228;Parent=HG002_chrY_T0000751;transcript_name=HG002_chrY_T0000751;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000751:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9285688	9285801	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000751;gene_id=HG002_chrY_G0000228;Parent=HG002_chrY_T0000751;transcript_name=HG002_chrY_T0000751;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000751:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9280192	9285789	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000752;gene_id=HG002_chrY_G0000228;Parent=HG002_chrY_G0000228;transcript_name=HG002_chrY_T0000752;gene_name=FAM197Y5;ID=HG002_chrY_T0000752;Name=FAM197Y5
HG002_chrY	CAT	exon	9280192	9280251	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000752;gene_id=HG002_chrY_G0000228;Parent=HG002_chrY_T0000752;transcript_name=HG002_chrY_T0000752;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000752:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9280252	9283800	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000752;gene_id=HG002_chrY_G0000228;Parent=HG002_chrY_T0000752;transcript_name=HG002_chrY_T0000752;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000752:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9283801	9283959	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000752;gene_id=HG002_chrY_G0000228;Parent=HG002_chrY_T0000752;transcript_name=HG002_chrY_T0000752;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000752:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9283960	9285455	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000752;gene_id=HG002_chrY_G0000228;Parent=HG002_chrY_T0000752;transcript_name=HG002_chrY_T0000752;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000752:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9285456	9285601	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000752;gene_id=HG002_chrY_G0000228;Parent=HG002_chrY_T0000752;transcript_name=HG002_chrY_T0000752;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000752:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9285602	9285687	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000752;gene_id=HG002_chrY_G0000228;Parent=HG002_chrY_T0000752;transcript_name=HG002_chrY_T0000752;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000752:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9285688	9285789	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000752;gene_id=HG002_chrY_G0000228;Parent=HG002_chrY_T0000752;transcript_name=HG002_chrY_T0000752;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000752:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9285456	9287448	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_5;gene_id=HG002_chrY_G0000229;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000229;Name=FAM197Y5
HG002_chrY	CAT	transcript	9285456	9287448	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000753;gene_id=HG002_chrY_G0000229;Parent=HG002_chrY_G0000229;transcript_name=HG002_chrY_T0000753;gene_name=FAM197Y5;ID=HG002_chrY_T0000753;Name=FAM197Y5
HG002_chrY	CAT	exon	9285456	9285601	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000753;gene_id=HG002_chrY_G0000229;Parent=HG002_chrY_T0000753;transcript_name=HG002_chrY_T0000753;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000753:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9285602	9287137	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000753;gene_id=HG002_chrY_G0000229;Parent=HG002_chrY_T0000753;transcript_name=HG002_chrY_T0000753;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000753:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9287138	9287448	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000753;gene_id=HG002_chrY_G0000229;Parent=HG002_chrY_T0000753;transcript_name=HG002_chrY_T0000753;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000753:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9288402	9291198	.	+	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;gene_id=HG002_chrY_G0000230;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=HG002_chrY_G0000230;Name=TSPY3
HG002_chrY	CAT	transcript	9288402	9291198	100	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000754;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_G0000230;transcript_name=HG002_chrY_T0000754;gene_name=TSPY3;ID=HG002_chrY_T0000754;Name=TSPY3
HG002_chrY	CAT	exon	9288402	9288933	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000754;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000754;transcript_name=HG002_chrY_T0000754;gene_name=TSPY3;ID=exon:HG002_chrY_T0000754:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9288448	9288933	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000754;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000754;transcript_name=HG002_chrY_T0000754;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000754:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9288448	9288450	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000754;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000754;transcript_name=HG002_chrY_T0000754;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000754;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9288934	9289540	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000754;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000754;transcript_name=HG002_chrY_T0000754;gene_name=TSPY3;ID=intron:HG002_chrY_T0000754:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9289541	9289618	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000754;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000754;transcript_name=HG002_chrY_T0000754;gene_name=TSPY3;ID=exon:HG002_chrY_T0000754:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9289541	9289618	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000754;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000754;transcript_name=HG002_chrY_T0000754;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000754:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9289619	9289746	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000754;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000754;transcript_name=HG002_chrY_T0000754;gene_name=TSPY3;ID=intron:HG002_chrY_T0000754:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9289747	9289858	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000754;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000754;transcript_name=HG002_chrY_T0000754;gene_name=TSPY3;ID=exon:HG002_chrY_T0000754:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9289747	9289858	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000754;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000754;transcript_name=HG002_chrY_T0000754;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000754:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9289859	9289959	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000754;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000754;transcript_name=HG002_chrY_T0000754;gene_name=TSPY3;ID=intron:HG002_chrY_T0000754:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9289960	9290105	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000754;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000754;transcript_name=HG002_chrY_T0000754;gene_name=TSPY3;ID=exon:HG002_chrY_T0000754:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9289960	9290105	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000754;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000754;transcript_name=HG002_chrY_T0000754;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000754:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9290106	9290211	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000754;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000754;transcript_name=HG002_chrY_T0000754;gene_name=TSPY3;ID=intron:HG002_chrY_T0000754:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9290212	9290293	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000754;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000754;transcript_name=HG002_chrY_T0000754;gene_name=TSPY3;ID=exon:HG002_chrY_T0000754:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9290212	9290293	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000754;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000754;transcript_name=HG002_chrY_T0000754;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000754:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9290294	9290987	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000754;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000754;transcript_name=HG002_chrY_T0000754;gene_name=TSPY3;ID=intron:HG002_chrY_T0000754:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9290988	9291198	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000754;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000754;transcript_name=HG002_chrY_T0000754;gene_name=TSPY3;ID=exon:HG002_chrY_T0000754:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9290988	9291010	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000754;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000754;transcript_name=HG002_chrY_T0000754;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000754:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9291008	9291010	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000754;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000754;transcript_name=HG002_chrY_T0000754;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000754;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9288448	9291197	100	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000755;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_G0000230;transcript_name=HG002_chrY_T0000755;gene_name=TSPY3;ID=HG002_chrY_T0000755;Name=TSPY3
HG002_chrY	CAT	exon	9288448	9288933	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000755;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000755;transcript_name=HG002_chrY_T0000755;gene_name=TSPY3;ID=exon:HG002_chrY_T0000755:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9288448	9288933	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000755;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000755;transcript_name=HG002_chrY_T0000755;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000755:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9288448	9288450	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000755;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000755;transcript_name=HG002_chrY_T0000755;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000755;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9288934	9289540	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000755;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000755;transcript_name=HG002_chrY_T0000755;gene_name=TSPY3;ID=intron:HG002_chrY_T0000755:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9289541	9289618	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000755;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000755;transcript_name=HG002_chrY_T0000755;gene_name=TSPY3;ID=exon:HG002_chrY_T0000755:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9289541	9289618	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000755;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000755;transcript_name=HG002_chrY_T0000755;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000755:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9289619	9289746	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000755;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000755;transcript_name=HG002_chrY_T0000755;gene_name=TSPY3;ID=intron:HG002_chrY_T0000755:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9289747	9289858	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000755;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000755;transcript_name=HG002_chrY_T0000755;gene_name=TSPY3;ID=exon:HG002_chrY_T0000755:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9289747	9289858	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000755;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000755;transcript_name=HG002_chrY_T0000755;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000755:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9289859	9289959	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000755;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000755;transcript_name=HG002_chrY_T0000755;gene_name=TSPY3;ID=intron:HG002_chrY_T0000755:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9289960	9290105	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000755;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000755;transcript_name=HG002_chrY_T0000755;gene_name=TSPY3;ID=exon:HG002_chrY_T0000755:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9289960	9290105	.	+	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000755;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000755;transcript_name=HG002_chrY_T0000755;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000755:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9290106	9290200	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000755;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000755;transcript_name=HG002_chrY_T0000755;gene_name=TSPY3;ID=intron:HG002_chrY_T0000755:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9290201	9290293	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000755;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000755;transcript_name=HG002_chrY_T0000755;gene_name=TSPY3;ID=exon:HG002_chrY_T0000755:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9290201	9290263	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000755;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000755;transcript_name=HG002_chrY_T0000755;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000755:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9290261	9290263	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000755;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000755;transcript_name=HG002_chrY_T0000755;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000755;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9290294	9290987	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000755;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000755;transcript_name=HG002_chrY_T0000755;gene_name=TSPY3;ID=intron:HG002_chrY_T0000755:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9290988	9291197	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000755;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000755;transcript_name=HG002_chrY_T0000755;gene_name=TSPY3;ID=exon:HG002_chrY_T0000755:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9288448	9291010	100	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000756;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_G0000230;transcript_name=HG002_chrY_T0000756;gene_name=TSPY3;ID=HG002_chrY_T0000756;Name=TSPY3
HG002_chrY	CAT	exon	9288448	9288534	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000756;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000756;transcript_name=HG002_chrY_T0000756;gene_name=TSPY3;ID=exon:HG002_chrY_T0000756:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9288448	9288534	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000756;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000756;transcript_name=HG002_chrY_T0000756;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000756:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9288448	9288450	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000756;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000756;transcript_name=HG002_chrY_T0000756;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000756;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9288535	9288795	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000756;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000756;transcript_name=HG002_chrY_T0000756;gene_name=TSPY3;ID=intron:HG002_chrY_T0000756:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9288796	9288933	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000756;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000756;transcript_name=HG002_chrY_T0000756;gene_name=TSPY3;ID=exon:HG002_chrY_T0000756:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9288796	9288933	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000756;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000756;transcript_name=HG002_chrY_T0000756;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000756:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9288934	9289540	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000756;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000756;transcript_name=HG002_chrY_T0000756;gene_name=TSPY3;ID=intron:HG002_chrY_T0000756:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9289541	9289618	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000756;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000756;transcript_name=HG002_chrY_T0000756;gene_name=TSPY3;ID=exon:HG002_chrY_T0000756:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9289541	9289618	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000756;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000756;transcript_name=HG002_chrY_T0000756;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000756:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9289619	9289746	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000756;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000756;transcript_name=HG002_chrY_T0000756;gene_name=TSPY3;ID=intron:HG002_chrY_T0000756:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9289747	9289858	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000756;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000756;transcript_name=HG002_chrY_T0000756;gene_name=TSPY3;ID=exon:HG002_chrY_T0000756:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9289747	9289858	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000756;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000756;transcript_name=HG002_chrY_T0000756;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000756:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9289859	9289959	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000756;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000756;transcript_name=HG002_chrY_T0000756;gene_name=TSPY3;ID=intron:HG002_chrY_T0000756:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9289960	9290105	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000756;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000756;transcript_name=HG002_chrY_T0000756;gene_name=TSPY3;ID=exon:HG002_chrY_T0000756:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9289960	9290105	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000756;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000756;transcript_name=HG002_chrY_T0000756;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000756:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9290106	9290211	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000756;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000756;transcript_name=HG002_chrY_T0000756;gene_name=TSPY3;ID=intron:HG002_chrY_T0000756:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9290212	9290293	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000756;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000756;transcript_name=HG002_chrY_T0000756;gene_name=TSPY3;ID=exon:HG002_chrY_T0000756:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9290212	9290293	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000756;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000756;transcript_name=HG002_chrY_T0000756;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000756:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9290294	9290987	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000756;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000756;transcript_name=HG002_chrY_T0000756;gene_name=TSPY3;ID=intron:HG002_chrY_T0000756:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9290988	9291010	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000756;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000756;transcript_name=HG002_chrY_T0000756;gene_name=TSPY3;ID=exon:HG002_chrY_T0000756:6;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9290988	9291010	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000756;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000756;transcript_name=HG002_chrY_T0000756;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000756:6;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9291008	9291010	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000756;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000756;transcript_name=HG002_chrY_T0000756;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000756;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9288448	9291204	1000	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000757;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_G0000230;transcript_name=HG002_chrY_T0000757;gene_name=TSPY3;ID=HG002_chrY_T0000757;Name=TSPY3
HG002_chrY	CAT	exon	9288448	9288933	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000757;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000757;transcript_name=HG002_chrY_T0000757;gene_name=TSPY3;ID=exon:HG002_chrY_T0000757:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9288934	9289540	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000757;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000757;transcript_name=HG002_chrY_T0000757;gene_name=TSPY3;ID=intron:HG002_chrY_T0000757:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9289541	9289618	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000757;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000757;transcript_name=HG002_chrY_T0000757;gene_name=TSPY3;ID=exon:HG002_chrY_T0000757:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9289619	9289746	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000757;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000757;transcript_name=HG002_chrY_T0000757;gene_name=TSPY3;ID=intron:HG002_chrY_T0000757:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9289747	9290293	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000757;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000757;transcript_name=HG002_chrY_T0000757;gene_name=TSPY3;ID=exon:HG002_chrY_T0000757:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9290294	9290420	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000757;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000757;transcript_name=HG002_chrY_T0000757;gene_name=TSPY3;ID=intron:HG002_chrY_T0000757:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9290421	9291204	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000757;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000757;transcript_name=HG002_chrY_T0000757;gene_name=TSPY3;ID=exon:HG002_chrY_T0000757:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9289808	9291189	1000	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000758;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_G0000230;transcript_name=HG002_chrY_T0000758;gene_name=TSPY3;ID=HG002_chrY_T0000758;Name=TSPY3
HG002_chrY	CAT	exon	9289808	9290105	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000758;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000758;transcript_name=HG002_chrY_T0000758;gene_name=TSPY3;ID=exon:HG002_chrY_T0000758:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9290106	9290200	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000758;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000758;transcript_name=HG002_chrY_T0000758;gene_name=TSPY3;ID=intron:HG002_chrY_T0000758:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9290201	9290293	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000758;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000758;transcript_name=HG002_chrY_T0000758;gene_name=TSPY3;ID=exon:HG002_chrY_T0000758:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9290294	9290987	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000758;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000758;transcript_name=HG002_chrY_T0000758;gene_name=TSPY3;ID=intron:HG002_chrY_T0000758:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9290988	9291189	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000758;gene_id=HG002_chrY_G0000230;Parent=HG002_chrY_T0000758;transcript_name=HG002_chrY_T0000758;gene_name=TSPY3;ID=exon:HG002_chrY_T0000758:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9298394	9306284	.	-	.	source_gene_common_name=FAM197Y7;source_gene=ENSG00000228383.7;gene_id=HG002_chrY_G0000231;gene_biotype=lncRNA;gene_name=FAM197Y7;gene_sources=liftoff;ID=HG002_chrY_G0000231;Name=FAM197Y7
HG002_chrY	CAT	transcript	9298394	9306284	1000	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000759;gene_id=HG002_chrY_G0000231;Parent=HG002_chrY_G0000231;transcript_name=HG002_chrY_T0000759;gene_name=FAM197Y7;ID=HG002_chrY_T0000759;Name=FAM197Y7
HG002_chrY	CAT	exon	9298394	9300517	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000759;gene_id=HG002_chrY_G0000231;Parent=HG002_chrY_T0000759;transcript_name=HG002_chrY_T0000759;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000759:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9300518	9304068	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000759;gene_id=HG002_chrY_G0000231;Parent=HG002_chrY_T0000759;transcript_name=HG002_chrY_T0000759;gene_name=FAM197Y7;ID=intron:HG002_chrY_T0000759:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9304069	9304154	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000759;gene_id=HG002_chrY_G0000231;Parent=HG002_chrY_T0000759;transcript_name=HG002_chrY_T0000759;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000759:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9304155	9305963	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000759;gene_id=HG002_chrY_G0000231;Parent=HG002_chrY_T0000759;transcript_name=HG002_chrY_T0000759;gene_name=FAM197Y7;ID=intron:HG002_chrY_T0000759:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9305964	9306073	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000759;gene_id=HG002_chrY_G0000231;Parent=HG002_chrY_T0000759;transcript_name=HG002_chrY_T0000759;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000759:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9306074	9306269	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000759;gene_id=HG002_chrY_G0000231;Parent=HG002_chrY_T0000759;transcript_name=HG002_chrY_T0000759;gene_name=FAM197Y7;ID=intron:HG002_chrY_T0000759:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9306270	9306284	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000759;gene_id=HG002_chrY_G0000231;Parent=HG002_chrY_T0000759;transcript_name=HG002_chrY_T0000759;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000759:3;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9300458	9306065	1000	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000760;gene_id=HG002_chrY_G0000231;Parent=HG002_chrY_G0000231;transcript_name=HG002_chrY_T0000760;gene_name=FAM197Y7;ID=HG002_chrY_T0000760;Name=FAM197Y7
HG002_chrY	CAT	exon	9300458	9300517	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000760;gene_id=HG002_chrY_G0000231;Parent=HG002_chrY_T0000760;transcript_name=HG002_chrY_T0000760;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000760:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9300518	9304068	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000760;gene_id=HG002_chrY_G0000231;Parent=HG002_chrY_T0000760;transcript_name=HG002_chrY_T0000760;gene_name=FAM197Y7;ID=intron:HG002_chrY_T0000760:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9304069	9304227	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000760;gene_id=HG002_chrY_G0000231;Parent=HG002_chrY_T0000760;transcript_name=HG002_chrY_T0000760;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000760:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9304228	9305731	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000760;gene_id=HG002_chrY_G0000231;Parent=HG002_chrY_T0000760;transcript_name=HG002_chrY_T0000760;gene_name=FAM197Y7;ID=intron:HG002_chrY_T0000760:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9305732	9305877	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000760;gene_id=HG002_chrY_G0000231;Parent=HG002_chrY_T0000760;transcript_name=HG002_chrY_T0000760;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000760:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9305878	9305963	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000760;gene_id=HG002_chrY_G0000231;Parent=HG002_chrY_T0000760;transcript_name=HG002_chrY_T0000760;gene_name=FAM197Y7;ID=intron:HG002_chrY_T0000760:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9305964	9306065	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG002_chrY_T0000760;gene_id=HG002_chrY_G0000231;Parent=HG002_chrY_T0000760;transcript_name=HG002_chrY_T0000760;gene_name=FAM197Y7;ID=exon:HG002_chrY_T0000760:3;Name=FAM197Y7;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9305732	9307724	.	-	.	source_gene_common_name=ENSG00000286120;source_gene=ENSG00000286120.1;gene_id=HG002_chrY_G0000232;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000286120;gene_sources=liftoff;ID=HG002_chrY_G0000232;Name=ENSG00000286120
HG002_chrY	CAT	transcript	9305732	9307724	1000	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG002_chrY_T0000761;gene_id=HG002_chrY_G0000232;Parent=HG002_chrY_G0000232;transcript_name=HG002_chrY_T0000761;gene_name=ENSG00000286120;ID=HG002_chrY_T0000761;Name=ENSG00000286120
HG002_chrY	CAT	exon	9305732	9305877	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG002_chrY_T0000761;gene_id=HG002_chrY_G0000232;Parent=HG002_chrY_T0000761;transcript_name=HG002_chrY_T0000761;gene_name=ENSG00000286120;ID=exon:HG002_chrY_T0000761:0;Name=ENSG00000286120;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9305878	9307413	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG002_chrY_T0000761;gene_id=HG002_chrY_G0000232;Parent=HG002_chrY_T0000761;transcript_name=HG002_chrY_T0000761;gene_name=ENSG00000286120;ID=intron:HG002_chrY_T0000761:0;Name=ENSG00000286120;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9307414	9307724	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG002_chrY_T0000761;gene_id=HG002_chrY_G0000232;Parent=HG002_chrY_T0000761;transcript_name=HG002_chrY_T0000761;gene_name=ENSG00000286120;ID=exon:HG002_chrY_T0000761:1;Name=ENSG00000286120;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9308678	9311474	.	+	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;gene_id=HG002_chrY_G0000233;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=HG002_chrY_G0000233;Name=TSPY3
HG002_chrY	CAT	transcript	9308678	9311474	100	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000762;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_G0000233;transcript_name=HG002_chrY_T0000762;gene_name=TSPY3;ID=HG002_chrY_T0000762;Name=TSPY3
HG002_chrY	CAT	exon	9308678	9309209	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000762;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000762;transcript_name=HG002_chrY_T0000762;gene_name=TSPY3;ID=exon:HG002_chrY_T0000762:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9308724	9309209	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000762;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000762;transcript_name=HG002_chrY_T0000762;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000762:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9308724	9308726	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000762;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000762;transcript_name=HG002_chrY_T0000762;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000762;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9309210	9309816	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000762;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000762;transcript_name=HG002_chrY_T0000762;gene_name=TSPY3;ID=intron:HG002_chrY_T0000762:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9309817	9309894	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000762;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000762;transcript_name=HG002_chrY_T0000762;gene_name=TSPY3;ID=exon:HG002_chrY_T0000762:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9309817	9309894	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000762;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000762;transcript_name=HG002_chrY_T0000762;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000762:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9309895	9310022	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000762;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000762;transcript_name=HG002_chrY_T0000762;gene_name=TSPY3;ID=intron:HG002_chrY_T0000762:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9310023	9310134	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000762;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000762;transcript_name=HG002_chrY_T0000762;gene_name=TSPY3;ID=exon:HG002_chrY_T0000762:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9310023	9310134	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000762;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000762;transcript_name=HG002_chrY_T0000762;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000762:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9310135	9310235	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000762;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000762;transcript_name=HG002_chrY_T0000762;gene_name=TSPY3;ID=intron:HG002_chrY_T0000762:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9310236	9310381	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000762;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000762;transcript_name=HG002_chrY_T0000762;gene_name=TSPY3;ID=exon:HG002_chrY_T0000762:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9310236	9310381	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000762;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000762;transcript_name=HG002_chrY_T0000762;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000762:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9310382	9310487	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000762;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000762;transcript_name=HG002_chrY_T0000762;gene_name=TSPY3;ID=intron:HG002_chrY_T0000762:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9310488	9310569	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000762;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000762;transcript_name=HG002_chrY_T0000762;gene_name=TSPY3;ID=exon:HG002_chrY_T0000762:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9310488	9310569	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000762;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000762;transcript_name=HG002_chrY_T0000762;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000762:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9310570	9311263	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000762;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000762;transcript_name=HG002_chrY_T0000762;gene_name=TSPY3;ID=intron:HG002_chrY_T0000762:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9311264	9311474	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000762;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000762;transcript_name=HG002_chrY_T0000762;gene_name=TSPY3;ID=exon:HG002_chrY_T0000762:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9311264	9311286	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000762;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000762;transcript_name=HG002_chrY_T0000762;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000762:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9311284	9311286	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000762;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000762;transcript_name=HG002_chrY_T0000762;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000762;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9308724	9311286	100	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000763;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_G0000233;transcript_name=HG002_chrY_T0000763;gene_name=TSPY3;ID=HG002_chrY_T0000763;Name=TSPY3
HG002_chrY	CAT	exon	9308724	9308810	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000763;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000763;transcript_name=HG002_chrY_T0000763;gene_name=TSPY3;ID=exon:HG002_chrY_T0000763:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9308724	9308810	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000763;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000763;transcript_name=HG002_chrY_T0000763;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000763:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9308724	9308726	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000763;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000763;transcript_name=HG002_chrY_T0000763;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000763;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9308811	9309071	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000763;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000763;transcript_name=HG002_chrY_T0000763;gene_name=TSPY3;ID=intron:HG002_chrY_T0000763:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9309072	9309209	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000763;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000763;transcript_name=HG002_chrY_T0000763;gene_name=TSPY3;ID=exon:HG002_chrY_T0000763:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9309072	9309209	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000763;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000763;transcript_name=HG002_chrY_T0000763;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000763:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9309210	9309816	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000763;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000763;transcript_name=HG002_chrY_T0000763;gene_name=TSPY3;ID=intron:HG002_chrY_T0000763:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9309817	9309894	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000763;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000763;transcript_name=HG002_chrY_T0000763;gene_name=TSPY3;ID=exon:HG002_chrY_T0000763:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9309817	9309894	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000763;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000763;transcript_name=HG002_chrY_T0000763;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000763:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9309895	9310022	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000763;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000763;transcript_name=HG002_chrY_T0000763;gene_name=TSPY3;ID=intron:HG002_chrY_T0000763:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9310023	9310134	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000763;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000763;transcript_name=HG002_chrY_T0000763;gene_name=TSPY3;ID=exon:HG002_chrY_T0000763:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9310023	9310134	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000763;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000763;transcript_name=HG002_chrY_T0000763;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000763:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9310135	9310235	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000763;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000763;transcript_name=HG002_chrY_T0000763;gene_name=TSPY3;ID=intron:HG002_chrY_T0000763:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9310236	9310381	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000763;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000763;transcript_name=HG002_chrY_T0000763;gene_name=TSPY3;ID=exon:HG002_chrY_T0000763:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9310236	9310381	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000763;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000763;transcript_name=HG002_chrY_T0000763;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000763:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9310382	9310487	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000763;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000763;transcript_name=HG002_chrY_T0000763;gene_name=TSPY3;ID=intron:HG002_chrY_T0000763:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9310488	9310569	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000763;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000763;transcript_name=HG002_chrY_T0000763;gene_name=TSPY3;ID=exon:HG002_chrY_T0000763:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9310488	9310569	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000763;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000763;transcript_name=HG002_chrY_T0000763;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000763:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9310570	9311263	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000763;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000763;transcript_name=HG002_chrY_T0000763;gene_name=TSPY3;ID=intron:HG002_chrY_T0000763:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9311264	9311286	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000763;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000763;transcript_name=HG002_chrY_T0000763;gene_name=TSPY3;ID=exon:HG002_chrY_T0000763:6;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9311264	9311286	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000763;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000763;transcript_name=HG002_chrY_T0000763;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000763:6;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9311284	9311286	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000763;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000763;transcript_name=HG002_chrY_T0000763;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000763;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9308724	9311473	100	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000764;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_G0000233;transcript_name=HG002_chrY_T0000764;gene_name=TSPY3;ID=HG002_chrY_T0000764;Name=TSPY3
HG002_chrY	CAT	exon	9308724	9309209	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000764;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000764;transcript_name=HG002_chrY_T0000764;gene_name=TSPY3;ID=exon:HG002_chrY_T0000764:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9308724	9309209	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000764;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000764;transcript_name=HG002_chrY_T0000764;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000764:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9308724	9308726	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000764;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000764;transcript_name=HG002_chrY_T0000764;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000764;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9309210	9309816	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000764;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000764;transcript_name=HG002_chrY_T0000764;gene_name=TSPY3;ID=intron:HG002_chrY_T0000764:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9309817	9309894	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000764;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000764;transcript_name=HG002_chrY_T0000764;gene_name=TSPY3;ID=exon:HG002_chrY_T0000764:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9309817	9309894	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000764;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000764;transcript_name=HG002_chrY_T0000764;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000764:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9309895	9310022	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000764;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000764;transcript_name=HG002_chrY_T0000764;gene_name=TSPY3;ID=intron:HG002_chrY_T0000764:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9310023	9310134	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000764;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000764;transcript_name=HG002_chrY_T0000764;gene_name=TSPY3;ID=exon:HG002_chrY_T0000764:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9310023	9310134	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000764;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000764;transcript_name=HG002_chrY_T0000764;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000764:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9310135	9310235	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000764;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000764;transcript_name=HG002_chrY_T0000764;gene_name=TSPY3;ID=intron:HG002_chrY_T0000764:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9310236	9310381	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000764;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000764;transcript_name=HG002_chrY_T0000764;gene_name=TSPY3;ID=exon:HG002_chrY_T0000764:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9310236	9310381	.	+	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000764;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000764;transcript_name=HG002_chrY_T0000764;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000764:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9310382	9310476	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000764;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000764;transcript_name=HG002_chrY_T0000764;gene_name=TSPY3;ID=intron:HG002_chrY_T0000764:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9310477	9310569	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000764;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000764;transcript_name=HG002_chrY_T0000764;gene_name=TSPY3;ID=exon:HG002_chrY_T0000764:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9310477	9310539	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000764;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000764;transcript_name=HG002_chrY_T0000764;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000764:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9310537	9310539	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000764;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000764;transcript_name=HG002_chrY_T0000764;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000764;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9310570	9311263	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000764;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000764;transcript_name=HG002_chrY_T0000764;gene_name=TSPY3;ID=intron:HG002_chrY_T0000764:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9311264	9311473	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000764;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000764;transcript_name=HG002_chrY_T0000764;gene_name=TSPY3;ID=exon:HG002_chrY_T0000764:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9308724	9311480	1000	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000765;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_G0000233;transcript_name=HG002_chrY_T0000765;gene_name=TSPY3;ID=HG002_chrY_T0000765;Name=TSPY3
HG002_chrY	CAT	exon	9308724	9309209	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000765;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000765;transcript_name=HG002_chrY_T0000765;gene_name=TSPY3;ID=exon:HG002_chrY_T0000765:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9309210	9309816	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000765;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000765;transcript_name=HG002_chrY_T0000765;gene_name=TSPY3;ID=intron:HG002_chrY_T0000765:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9309817	9309894	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000765;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000765;transcript_name=HG002_chrY_T0000765;gene_name=TSPY3;ID=exon:HG002_chrY_T0000765:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9309895	9310022	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000765;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000765;transcript_name=HG002_chrY_T0000765;gene_name=TSPY3;ID=intron:HG002_chrY_T0000765:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9310023	9310569	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000765;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000765;transcript_name=HG002_chrY_T0000765;gene_name=TSPY3;ID=exon:HG002_chrY_T0000765:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9310570	9310696	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000765;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000765;transcript_name=HG002_chrY_T0000765;gene_name=TSPY3;ID=intron:HG002_chrY_T0000765:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9310697	9311480	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000765;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000765;transcript_name=HG002_chrY_T0000765;gene_name=TSPY3;ID=exon:HG002_chrY_T0000765:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9310084	9311465	1000	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000766;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_G0000233;transcript_name=HG002_chrY_T0000766;gene_name=TSPY3;ID=HG002_chrY_T0000766;Name=TSPY3
HG002_chrY	CAT	exon	9310084	9310381	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000766;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000766;transcript_name=HG002_chrY_T0000766;gene_name=TSPY3;ID=exon:HG002_chrY_T0000766:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9310382	9310476	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000766;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000766;transcript_name=HG002_chrY_T0000766;gene_name=TSPY3;ID=intron:HG002_chrY_T0000766:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9310477	9310569	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000766;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000766;transcript_name=HG002_chrY_T0000766;gene_name=TSPY3;ID=exon:HG002_chrY_T0000766:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9310570	9311263	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000766;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000766;transcript_name=HG002_chrY_T0000766;gene_name=TSPY3;ID=intron:HG002_chrY_T0000766:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9311264	9311465	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000766;gene_id=HG002_chrY_G0000233;Parent=HG002_chrY_T0000766;transcript_name=HG002_chrY_T0000766;gene_name=TSPY3;ID=exon:HG002_chrY_T0000766:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9318678	9326364	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1_5;gene_id=HG002_chrY_G0000234;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG002_chrY_G0000234;Name=FAM197Y9
HG002_chrY	CAT	transcript	9318678	9326364	1000	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000767;gene_id=HG002_chrY_G0000234;Parent=HG002_chrY_G0000234;transcript_name=HG002_chrY_T0000767;gene_name=FAM197Y9;ID=HG002_chrY_T0000767;Name=FAM197Y9
HG002_chrY	CAT	exon	9318678	9320805	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000767;gene_id=HG002_chrY_G0000234;Parent=HG002_chrY_T0000767;transcript_name=HG002_chrY_T0000767;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000767:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9320806	9324353	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000767;gene_id=HG002_chrY_G0000234;Parent=HG002_chrY_T0000767;transcript_name=HG002_chrY_T0000767;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000767:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9324354	9324439	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000767;gene_id=HG002_chrY_G0000234;Parent=HG002_chrY_T0000767;transcript_name=HG002_chrY_T0000767;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000767:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9324440	9326244	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000767;gene_id=HG002_chrY_G0000234;Parent=HG002_chrY_T0000767;transcript_name=HG002_chrY_T0000767;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000767:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9326245	9326364	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000767;gene_id=HG002_chrY_G0000234;Parent=HG002_chrY_T0000767;transcript_name=HG002_chrY_T0000767;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000767:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9320746	9326346	1000	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000768;gene_id=HG002_chrY_G0000234;Parent=HG002_chrY_G0000234;transcript_name=HG002_chrY_T0000768;gene_name=FAM197Y9;ID=HG002_chrY_T0000768;Name=FAM197Y9
HG002_chrY	CAT	exon	9320746	9320805	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000768;gene_id=HG002_chrY_G0000234;Parent=HG002_chrY_T0000768;transcript_name=HG002_chrY_T0000768;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000768:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9320806	9324353	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000768;gene_id=HG002_chrY_G0000234;Parent=HG002_chrY_T0000768;transcript_name=HG002_chrY_T0000768;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000768:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9324354	9324512	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000768;gene_id=HG002_chrY_G0000234;Parent=HG002_chrY_T0000768;transcript_name=HG002_chrY_T0000768;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000768:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9324513	9326012	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000768;gene_id=HG002_chrY_G0000234;Parent=HG002_chrY_T0000768;transcript_name=HG002_chrY_T0000768;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000768:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9326013	9326158	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000768;gene_id=HG002_chrY_G0000234;Parent=HG002_chrY_T0000768;transcript_name=HG002_chrY_T0000768;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000768:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9326159	9326244	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000768;gene_id=HG002_chrY_G0000234;Parent=HG002_chrY_T0000768;transcript_name=HG002_chrY_T0000768;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000768:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9326245	9326346	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000768;gene_id=HG002_chrY_G0000234;Parent=HG002_chrY_T0000768;transcript_name=HG002_chrY_T0000768;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000768:3;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9326013	9328006	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9_3;gene_id=HG002_chrY_G0000235;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG002_chrY_G0000235;Name=FAM197Y9
HG002_chrY	CAT	transcript	9326013	9328006	1000	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000769;gene_id=HG002_chrY_G0000235;Parent=HG002_chrY_G0000235;transcript_name=HG002_chrY_T0000769;gene_name=FAM197Y9;ID=HG002_chrY_T0000769;Name=FAM197Y9
HG002_chrY	CAT	exon	9326013	9326158	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000769;gene_id=HG002_chrY_G0000235;Parent=HG002_chrY_T0000769;transcript_name=HG002_chrY_T0000769;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000769:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9326159	9326270	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000769;gene_id=HG002_chrY_G0000235;Parent=HG002_chrY_T0000769;transcript_name=HG002_chrY_T0000769;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000769:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9326271	9326354	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000769;gene_id=HG002_chrY_G0000235;Parent=HG002_chrY_T0000769;transcript_name=HG002_chrY_T0000769;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000769:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9326355	9327696	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000769;gene_id=HG002_chrY_G0000235;Parent=HG002_chrY_T0000769;transcript_name=HG002_chrY_T0000769;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000769:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9327697	9328006	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000769;gene_id=HG002_chrY_G0000235;Parent=HG002_chrY_T0000769;transcript_name=HG002_chrY_T0000769;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000769:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9328955	9331751	.	+	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;gene_id=HG002_chrY_G0000236;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=HG002_chrY_G0000236;Name=TSPY3
HG002_chrY	CAT	transcript	9328955	9331751	100	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000770;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_G0000236;transcript_name=HG002_chrY_T0000770;gene_name=TSPY3;ID=HG002_chrY_T0000770;Name=TSPY3
HG002_chrY	CAT	exon	9328955	9329486	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000770;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000770;transcript_name=HG002_chrY_T0000770;gene_name=TSPY3;ID=exon:HG002_chrY_T0000770:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9329001	9329486	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000770;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000770;transcript_name=HG002_chrY_T0000770;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000770:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9329001	9329003	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000770;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000770;transcript_name=HG002_chrY_T0000770;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000770;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9329487	9330093	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000770;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000770;transcript_name=HG002_chrY_T0000770;gene_name=TSPY3;ID=intron:HG002_chrY_T0000770:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9330094	9330171	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000770;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000770;transcript_name=HG002_chrY_T0000770;gene_name=TSPY3;ID=exon:HG002_chrY_T0000770:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9330094	9330171	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000770;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000770;transcript_name=HG002_chrY_T0000770;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000770:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9330172	9330299	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000770;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000770;transcript_name=HG002_chrY_T0000770;gene_name=TSPY3;ID=intron:HG002_chrY_T0000770:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9330300	9330411	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000770;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000770;transcript_name=HG002_chrY_T0000770;gene_name=TSPY3;ID=exon:HG002_chrY_T0000770:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9330300	9330411	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000770;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000770;transcript_name=HG002_chrY_T0000770;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000770:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9330412	9330512	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000770;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000770;transcript_name=HG002_chrY_T0000770;gene_name=TSPY3;ID=intron:HG002_chrY_T0000770:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9330513	9330658	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000770;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000770;transcript_name=HG002_chrY_T0000770;gene_name=TSPY3;ID=exon:HG002_chrY_T0000770:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9330513	9330658	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000770;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000770;transcript_name=HG002_chrY_T0000770;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000770:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9330659	9330764	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000770;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000770;transcript_name=HG002_chrY_T0000770;gene_name=TSPY3;ID=intron:HG002_chrY_T0000770:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9330765	9330846	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000770;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000770;transcript_name=HG002_chrY_T0000770;gene_name=TSPY3;ID=exon:HG002_chrY_T0000770:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9330765	9330846	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000770;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000770;transcript_name=HG002_chrY_T0000770;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000770:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9330847	9331540	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000770;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000770;transcript_name=HG002_chrY_T0000770;gene_name=TSPY3;ID=intron:HG002_chrY_T0000770:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9331541	9331751	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000770;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000770;transcript_name=HG002_chrY_T0000770;gene_name=TSPY3;ID=exon:HG002_chrY_T0000770:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9331541	9331563	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000770;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000770;transcript_name=HG002_chrY_T0000770;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000770:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9331561	9331563	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000770;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000770;transcript_name=HG002_chrY_T0000770;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000770;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9329001	9331563	100	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000771;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_G0000236;transcript_name=HG002_chrY_T0000771;gene_name=TSPY3;ID=HG002_chrY_T0000771;Name=TSPY3
HG002_chrY	CAT	exon	9329001	9329087	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000771;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000771;transcript_name=HG002_chrY_T0000771;gene_name=TSPY3;ID=exon:HG002_chrY_T0000771:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9329001	9329087	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000771;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000771;transcript_name=HG002_chrY_T0000771;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000771:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9329001	9329003	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000771;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000771;transcript_name=HG002_chrY_T0000771;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000771;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9329088	9329348	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000771;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000771;transcript_name=HG002_chrY_T0000771;gene_name=TSPY3;ID=intron:HG002_chrY_T0000771:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9329349	9329486	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000771;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000771;transcript_name=HG002_chrY_T0000771;gene_name=TSPY3;ID=exon:HG002_chrY_T0000771:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9329349	9329486	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000771;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000771;transcript_name=HG002_chrY_T0000771;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000771:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9329487	9330093	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000771;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000771;transcript_name=HG002_chrY_T0000771;gene_name=TSPY3;ID=intron:HG002_chrY_T0000771:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9330094	9330171	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000771;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000771;transcript_name=HG002_chrY_T0000771;gene_name=TSPY3;ID=exon:HG002_chrY_T0000771:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9330094	9330171	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000771;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000771;transcript_name=HG002_chrY_T0000771;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000771:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9330172	9330299	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000771;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000771;transcript_name=HG002_chrY_T0000771;gene_name=TSPY3;ID=intron:HG002_chrY_T0000771:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9330300	9330411	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000771;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000771;transcript_name=HG002_chrY_T0000771;gene_name=TSPY3;ID=exon:HG002_chrY_T0000771:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9330300	9330411	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000771;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000771;transcript_name=HG002_chrY_T0000771;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000771:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9330412	9330512	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000771;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000771;transcript_name=HG002_chrY_T0000771;gene_name=TSPY3;ID=intron:HG002_chrY_T0000771:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9330513	9330658	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000771;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000771;transcript_name=HG002_chrY_T0000771;gene_name=TSPY3;ID=exon:HG002_chrY_T0000771:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9330513	9330658	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000771;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000771;transcript_name=HG002_chrY_T0000771;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000771:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9330659	9330764	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000771;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000771;transcript_name=HG002_chrY_T0000771;gene_name=TSPY3;ID=intron:HG002_chrY_T0000771:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9330765	9330846	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000771;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000771;transcript_name=HG002_chrY_T0000771;gene_name=TSPY3;ID=exon:HG002_chrY_T0000771:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9330765	9330846	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000771;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000771;transcript_name=HG002_chrY_T0000771;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000771:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9330847	9331540	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000771;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000771;transcript_name=HG002_chrY_T0000771;gene_name=TSPY3;ID=intron:HG002_chrY_T0000771:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9331541	9331563	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000771;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000771;transcript_name=HG002_chrY_T0000771;gene_name=TSPY3;ID=exon:HG002_chrY_T0000771:6;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9331541	9331563	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000771;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000771;transcript_name=HG002_chrY_T0000771;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000771:6;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9331561	9331563	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000771;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000771;transcript_name=HG002_chrY_T0000771;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000771;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9329001	9331750	100	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000772;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_G0000236;transcript_name=HG002_chrY_T0000772;gene_name=TSPY3;ID=HG002_chrY_T0000772;Name=TSPY3
HG002_chrY	CAT	exon	9329001	9329486	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000772;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000772;transcript_name=HG002_chrY_T0000772;gene_name=TSPY3;ID=exon:HG002_chrY_T0000772:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9329001	9329486	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000772;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000772;transcript_name=HG002_chrY_T0000772;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000772:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9329001	9329003	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000772;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000772;transcript_name=HG002_chrY_T0000772;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000772;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9329487	9330093	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000772;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000772;transcript_name=HG002_chrY_T0000772;gene_name=TSPY3;ID=intron:HG002_chrY_T0000772:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9330094	9330171	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000772;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000772;transcript_name=HG002_chrY_T0000772;gene_name=TSPY3;ID=exon:HG002_chrY_T0000772:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9330094	9330171	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000772;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000772;transcript_name=HG002_chrY_T0000772;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000772:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9330172	9330299	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000772;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000772;transcript_name=HG002_chrY_T0000772;gene_name=TSPY3;ID=intron:HG002_chrY_T0000772:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9330300	9330411	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000772;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000772;transcript_name=HG002_chrY_T0000772;gene_name=TSPY3;ID=exon:HG002_chrY_T0000772:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9330300	9330411	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000772;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000772;transcript_name=HG002_chrY_T0000772;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000772:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9330412	9330512	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000772;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000772;transcript_name=HG002_chrY_T0000772;gene_name=TSPY3;ID=intron:HG002_chrY_T0000772:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9330513	9330658	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000772;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000772;transcript_name=HG002_chrY_T0000772;gene_name=TSPY3;ID=exon:HG002_chrY_T0000772:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9330513	9330658	.	+	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000772;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000772;transcript_name=HG002_chrY_T0000772;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000772:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9330659	9330753	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000772;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000772;transcript_name=HG002_chrY_T0000772;gene_name=TSPY3;ID=intron:HG002_chrY_T0000772:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9330754	9330846	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000772;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000772;transcript_name=HG002_chrY_T0000772;gene_name=TSPY3;ID=exon:HG002_chrY_T0000772:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9330754	9330816	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000772;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000772;transcript_name=HG002_chrY_T0000772;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000772:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9330814	9330816	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000772;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000772;transcript_name=HG002_chrY_T0000772;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000772;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9330847	9331540	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000772;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000772;transcript_name=HG002_chrY_T0000772;gene_name=TSPY3;ID=intron:HG002_chrY_T0000772:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9331541	9331750	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000772;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000772;transcript_name=HG002_chrY_T0000772;gene_name=TSPY3;ID=exon:HG002_chrY_T0000772:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9329001	9331757	1000	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000773;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_G0000236;transcript_name=HG002_chrY_T0000773;gene_name=TSPY3;ID=HG002_chrY_T0000773;Name=TSPY3
HG002_chrY	CAT	exon	9329001	9329486	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000773;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000773;transcript_name=HG002_chrY_T0000773;gene_name=TSPY3;ID=exon:HG002_chrY_T0000773:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9329487	9330093	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000773;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000773;transcript_name=HG002_chrY_T0000773;gene_name=TSPY3;ID=intron:HG002_chrY_T0000773:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9330094	9330171	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000773;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000773;transcript_name=HG002_chrY_T0000773;gene_name=TSPY3;ID=exon:HG002_chrY_T0000773:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9330172	9330299	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000773;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000773;transcript_name=HG002_chrY_T0000773;gene_name=TSPY3;ID=intron:HG002_chrY_T0000773:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9330300	9330846	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000773;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000773;transcript_name=HG002_chrY_T0000773;gene_name=TSPY3;ID=exon:HG002_chrY_T0000773:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9330847	9330973	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000773;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000773;transcript_name=HG002_chrY_T0000773;gene_name=TSPY3;ID=intron:HG002_chrY_T0000773:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9330974	9331757	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000773;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000773;transcript_name=HG002_chrY_T0000773;gene_name=TSPY3;ID=exon:HG002_chrY_T0000773:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9330361	9331742	1000	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000774;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_G0000236;transcript_name=HG002_chrY_T0000774;gene_name=TSPY3;ID=HG002_chrY_T0000774;Name=TSPY3
HG002_chrY	CAT	exon	9330361	9330658	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000774;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000774;transcript_name=HG002_chrY_T0000774;gene_name=TSPY3;ID=exon:HG002_chrY_T0000774:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9330659	9330753	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000774;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000774;transcript_name=HG002_chrY_T0000774;gene_name=TSPY3;ID=intron:HG002_chrY_T0000774:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9330754	9330846	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000774;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000774;transcript_name=HG002_chrY_T0000774;gene_name=TSPY3;ID=exon:HG002_chrY_T0000774:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9330847	9331540	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000774;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000774;transcript_name=HG002_chrY_T0000774;gene_name=TSPY3;ID=intron:HG002_chrY_T0000774:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9331541	9331742	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000774;gene_id=HG002_chrY_G0000236;Parent=HG002_chrY_T0000774;transcript_name=HG002_chrY_T0000774;gene_name=TSPY3;ID=exon:HG002_chrY_T0000774:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9340894	9346640	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=HG002_chrY_G0000237;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000237;Name=FAM197Y5
HG002_chrY	CAT	transcript	9340894	9346640	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000775;gene_id=HG002_chrY_G0000237;Parent=HG002_chrY_G0000237;transcript_name=HG002_chrY_T0000775;gene_name=FAM197Y5;ID=HG002_chrY_T0000775;Name=FAM197Y5
HG002_chrY	CAT	exon	9340894	9341083	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000775;gene_id=HG002_chrY_G0000237;Parent=HG002_chrY_T0000775;transcript_name=HG002_chrY_T0000775;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000775:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9341084	9344633	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000775;gene_id=HG002_chrY_G0000237;Parent=HG002_chrY_T0000775;transcript_name=HG002_chrY_T0000775;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000775:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9344634	9344719	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000775;gene_id=HG002_chrY_G0000237;Parent=HG002_chrY_T0000775;transcript_name=HG002_chrY_T0000775;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000775:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9344720	9346526	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000775;gene_id=HG002_chrY_G0000237;Parent=HG002_chrY_T0000775;transcript_name=HG002_chrY_T0000775;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000775:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9346527	9346640	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000775;gene_id=HG002_chrY_G0000237;Parent=HG002_chrY_T0000775;transcript_name=HG002_chrY_T0000775;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000775:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9341024	9346628	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000776;gene_id=HG002_chrY_G0000237;Parent=HG002_chrY_G0000237;transcript_name=HG002_chrY_T0000776;gene_name=FAM197Y5;ID=HG002_chrY_T0000776;Name=FAM197Y5
HG002_chrY	CAT	exon	9341024	9341083	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000776;gene_id=HG002_chrY_G0000237;Parent=HG002_chrY_T0000776;transcript_name=HG002_chrY_T0000776;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000776:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9341084	9344633	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000776;gene_id=HG002_chrY_G0000237;Parent=HG002_chrY_T0000776;transcript_name=HG002_chrY_T0000776;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000776:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9344634	9344792	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000776;gene_id=HG002_chrY_G0000237;Parent=HG002_chrY_T0000776;transcript_name=HG002_chrY_T0000776;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000776:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9344793	9346294	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000776;gene_id=HG002_chrY_G0000237;Parent=HG002_chrY_T0000776;transcript_name=HG002_chrY_T0000776;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000776:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9346295	9346440	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000776;gene_id=HG002_chrY_G0000237;Parent=HG002_chrY_T0000776;transcript_name=HG002_chrY_T0000776;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000776:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9346441	9346526	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000776;gene_id=HG002_chrY_G0000237;Parent=HG002_chrY_T0000776;transcript_name=HG002_chrY_T0000776;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000776:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9346527	9346628	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000776;gene_id=HG002_chrY_G0000237;Parent=HG002_chrY_T0000776;transcript_name=HG002_chrY_T0000776;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000776:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9346295	9348287	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8;gene_id=HG002_chrY_G0000238;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000238;Name=FAM197Y5
HG002_chrY	CAT	transcript	9346295	9348287	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000777;gene_id=HG002_chrY_G0000238;Parent=HG002_chrY_G0000238;transcript_name=HG002_chrY_T0000777;gene_name=FAM197Y5;ID=HG002_chrY_T0000777;Name=FAM197Y5
HG002_chrY	CAT	exon	9346295	9346440	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000777;gene_id=HG002_chrY_G0000238;Parent=HG002_chrY_T0000777;transcript_name=HG002_chrY_T0000777;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000777:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9346441	9347976	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000777;gene_id=HG002_chrY_G0000238;Parent=HG002_chrY_T0000777;transcript_name=HG002_chrY_T0000777;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000777:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9347977	9348287	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000777;gene_id=HG002_chrY_G0000238;Parent=HG002_chrY_T0000777;transcript_name=HG002_chrY_T0000777;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000777:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9349241	9352037	.	+	.	source_gene_common_name=TSPY10;source_gene=ENSG00000236424.7;alternative_source_transcripts=ENST00000451548.6;gene_id=HG002_chrY_G0000239;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG002_chrY_G0000239;Name=TSPY10
HG002_chrY	CAT	transcript	9349241	9352037	100	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG002_chrY_T0000778;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_G0000239;transcript_name=HG002_chrY_T0000778;gene_name=TSPY10;ID=HG002_chrY_T0000778;Name=TSPY10
HG002_chrY	CAT	exon	9349241	9349772	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG002_chrY_T0000778;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000778;transcript_name=HG002_chrY_T0000778;gene_name=TSPY10;ID=exon:HG002_chrY_T0000778:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9349287	9349772	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG002_chrY_T0000778;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000778;transcript_name=HG002_chrY_T0000778;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000778:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9349287	9349289	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG002_chrY_T0000778;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000778;transcript_name=HG002_chrY_T0000778;gene_name=TSPY10;ID=start_codon:HG002_chrY_T0000778;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9349773	9350379	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG002_chrY_T0000778;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000778;transcript_name=HG002_chrY_T0000778;gene_name=TSPY10;ID=intron:HG002_chrY_T0000778:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9350380	9350457	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG002_chrY_T0000778;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000778;transcript_name=HG002_chrY_T0000778;gene_name=TSPY10;ID=exon:HG002_chrY_T0000778:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9350380	9350457	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG002_chrY_T0000778;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000778;transcript_name=HG002_chrY_T0000778;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000778:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9350458	9350585	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG002_chrY_T0000778;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000778;transcript_name=HG002_chrY_T0000778;gene_name=TSPY10;ID=intron:HG002_chrY_T0000778:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9350586	9350697	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG002_chrY_T0000778;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000778;transcript_name=HG002_chrY_T0000778;gene_name=TSPY10;ID=exon:HG002_chrY_T0000778:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9350586	9350697	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG002_chrY_T0000778;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000778;transcript_name=HG002_chrY_T0000778;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000778:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9350698	9350798	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG002_chrY_T0000778;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000778;transcript_name=HG002_chrY_T0000778;gene_name=TSPY10;ID=intron:HG002_chrY_T0000778:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9350799	9350944	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG002_chrY_T0000778;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000778;transcript_name=HG002_chrY_T0000778;gene_name=TSPY10;ID=exon:HG002_chrY_T0000778:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9350799	9350944	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG002_chrY_T0000778;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000778;transcript_name=HG002_chrY_T0000778;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000778:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9350945	9351050	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG002_chrY_T0000778;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000778;transcript_name=HG002_chrY_T0000778;gene_name=TSPY10;ID=intron:HG002_chrY_T0000778:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9351051	9351132	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG002_chrY_T0000778;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000778;transcript_name=HG002_chrY_T0000778;gene_name=TSPY10;ID=exon:HG002_chrY_T0000778:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9351051	9351132	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG002_chrY_T0000778;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000778;transcript_name=HG002_chrY_T0000778;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000778:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9351133	9351826	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG002_chrY_T0000778;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000778;transcript_name=HG002_chrY_T0000778;gene_name=TSPY10;ID=intron:HG002_chrY_T0000778:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9351827	9352037	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG002_chrY_T0000778;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000778;transcript_name=HG002_chrY_T0000778;gene_name=TSPY10;ID=exon:HG002_chrY_T0000778:5;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9351827	9351849	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG002_chrY_T0000778;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000778;transcript_name=HG002_chrY_T0000778;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000778:5;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9351847	9351849	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG002_chrY_T0000778;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000778;transcript_name=HG002_chrY_T0000778;gene_name=TSPY10;ID=stop_codon:HG002_chrY_T0000778;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9349287	9352036	100	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000779;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_G0000239;transcript_name=HG002_chrY_T0000779;gene_name=TSPY10;ID=HG002_chrY_T0000779;Name=TSPY10
HG002_chrY	CAT	exon	9349287	9349772	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000779;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000779;transcript_name=HG002_chrY_T0000779;gene_name=TSPY10;ID=exon:HG002_chrY_T0000779:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9349287	9349772	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000779;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000779;transcript_name=HG002_chrY_T0000779;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000779:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9349287	9349289	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000779;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000779;transcript_name=HG002_chrY_T0000779;gene_name=TSPY10;ID=start_codon:HG002_chrY_T0000779;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9349773	9350379	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000779;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000779;transcript_name=HG002_chrY_T0000779;gene_name=TSPY10;ID=intron:HG002_chrY_T0000779:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9350380	9350457	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000779;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000779;transcript_name=HG002_chrY_T0000779;gene_name=TSPY10;ID=exon:HG002_chrY_T0000779:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9350380	9350457	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000779;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000779;transcript_name=HG002_chrY_T0000779;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000779:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9350458	9350585	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000779;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000779;transcript_name=HG002_chrY_T0000779;gene_name=TSPY10;ID=intron:HG002_chrY_T0000779:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9350586	9350697	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000779;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000779;transcript_name=HG002_chrY_T0000779;gene_name=TSPY10;ID=exon:HG002_chrY_T0000779:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9350586	9350697	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000779;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000779;transcript_name=HG002_chrY_T0000779;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000779:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9350698	9350798	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000779;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000779;transcript_name=HG002_chrY_T0000779;gene_name=TSPY10;ID=intron:HG002_chrY_T0000779:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9350799	9350944	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000779;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000779;transcript_name=HG002_chrY_T0000779;gene_name=TSPY10;ID=exon:HG002_chrY_T0000779:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9350799	9350944	.	+	2	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000779;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000779;transcript_name=HG002_chrY_T0000779;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000779:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9350945	9351039	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000779;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000779;transcript_name=HG002_chrY_T0000779;gene_name=TSPY10;ID=intron:HG002_chrY_T0000779:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9351040	9351132	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000779;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000779;transcript_name=HG002_chrY_T0000779;gene_name=TSPY10;ID=exon:HG002_chrY_T0000779:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9351040	9351102	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000779;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000779;transcript_name=HG002_chrY_T0000779;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000779:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9351100	9351102	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000779;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000779;transcript_name=HG002_chrY_T0000779;gene_name=TSPY10;ID=stop_codon:HG002_chrY_T0000779;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9351133	9351826	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000779;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000779;transcript_name=HG002_chrY_T0000779;gene_name=TSPY10;ID=intron:HG002_chrY_T0000779:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9351827	9352036	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000779;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000779;transcript_name=HG002_chrY_T0000779;gene_name=TSPY10;ID=exon:HG002_chrY_T0000779:5;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9349287	9352043	1000	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000780;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_G0000239;transcript_name=HG002_chrY_T0000780;gene_name=TSPY10;ID=HG002_chrY_T0000780;Name=TSPY10
HG002_chrY	CAT	exon	9349287	9349772	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000780;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000780;transcript_name=HG002_chrY_T0000780;gene_name=TSPY10;ID=exon:HG002_chrY_T0000780:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9349773	9350379	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000780;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000780;transcript_name=HG002_chrY_T0000780;gene_name=TSPY10;ID=intron:HG002_chrY_T0000780:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9350380	9350457	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000780;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000780;transcript_name=HG002_chrY_T0000780;gene_name=TSPY10;ID=exon:HG002_chrY_T0000780:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9350458	9350585	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000780;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000780;transcript_name=HG002_chrY_T0000780;gene_name=TSPY10;ID=intron:HG002_chrY_T0000780:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9350586	9351132	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000780;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000780;transcript_name=HG002_chrY_T0000780;gene_name=TSPY10;ID=exon:HG002_chrY_T0000780:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9351133	9351259	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000780;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000780;transcript_name=HG002_chrY_T0000780;gene_name=TSPY10;ID=intron:HG002_chrY_T0000780:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9351260	9352043	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000780;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000780;transcript_name=HG002_chrY_T0000780;gene_name=TSPY10;ID=exon:HG002_chrY_T0000780:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9350647	9352028	1000	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000781;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_G0000239;transcript_name=HG002_chrY_T0000781;gene_name=TSPY10;ID=HG002_chrY_T0000781;Name=TSPY10
HG002_chrY	CAT	exon	9350647	9350944	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000781;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000781;transcript_name=HG002_chrY_T0000781;gene_name=TSPY10;ID=exon:HG002_chrY_T0000781:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9350945	9351050	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000781;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000781;transcript_name=HG002_chrY_T0000781;gene_name=TSPY10;ID=intron:HG002_chrY_T0000781:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9351051	9351132	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000781;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000781;transcript_name=HG002_chrY_T0000781;gene_name=TSPY10;ID=exon:HG002_chrY_T0000781:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9351133	9351826	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000781;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000781;transcript_name=HG002_chrY_T0000781;gene_name=TSPY10;ID=intron:HG002_chrY_T0000781:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9351827	9352028	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000781;gene_id=HG002_chrY_G0000239;Parent=HG002_chrY_T0000781;transcript_name=HG002_chrY_T0000781;gene_name=TSPY10;ID=exon:HG002_chrY_T0000781:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9361168	9366903	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;alternative_source_transcripts=ENST00000615605.1;gene_id=HG002_chrY_G0000240;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000240;Name=FAM197Y5
HG002_chrY	CAT	transcript	9361168	9366903	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=ENST00000615605.1;transcript_id=HG002_chrY_T0000782;gene_id=HG002_chrY_G0000240;Parent=HG002_chrY_G0000240;transcript_name=HG002_chrY_T0000782;gene_name=FAM197Y5;ID=HG002_chrY_T0000782;Name=FAM197Y5
HG002_chrY	CAT	exon	9361168	9361357	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=ENST00000615605.1;transcript_id=HG002_chrY_T0000782;gene_id=HG002_chrY_G0000240;Parent=HG002_chrY_T0000782;transcript_name=HG002_chrY_T0000782;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000782:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9361358	9364906	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=ENST00000615605.1;transcript_id=HG002_chrY_T0000782;gene_id=HG002_chrY_G0000240;Parent=HG002_chrY_T0000782;transcript_name=HG002_chrY_T0000782;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000782:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9364907	9364992	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=ENST00000615605.1;transcript_id=HG002_chrY_T0000782;gene_id=HG002_chrY_G0000240;Parent=HG002_chrY_T0000782;transcript_name=HG002_chrY_T0000782;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000782:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9364993	9366789	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=ENST00000615605.1;transcript_id=HG002_chrY_T0000782;gene_id=HG002_chrY_G0000240;Parent=HG002_chrY_T0000782;transcript_name=HG002_chrY_T0000782;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000782:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9366790	9366903	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=ENST00000615605.1;transcript_id=HG002_chrY_T0000782;gene_id=HG002_chrY_G0000240;Parent=HG002_chrY_T0000782;transcript_name=HG002_chrY_T0000782;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000782:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9361298	9366891	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=ENST00000619815.4;transcript_id=HG002_chrY_T0000783;gene_id=HG002_chrY_G0000240;Parent=HG002_chrY_G0000240;transcript_name=HG002_chrY_T0000783;gene_name=FAM197Y5;ID=HG002_chrY_T0000783;Name=FAM197Y5
HG002_chrY	CAT	exon	9361298	9361357	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=ENST00000619815.4;transcript_id=HG002_chrY_T0000783;gene_id=HG002_chrY_G0000240;Parent=HG002_chrY_T0000783;transcript_name=HG002_chrY_T0000783;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000783:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9361358	9364906	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=ENST00000619815.4;transcript_id=HG002_chrY_T0000783;gene_id=HG002_chrY_G0000240;Parent=HG002_chrY_T0000783;transcript_name=HG002_chrY_T0000783;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000783:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9364907	9365065	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=ENST00000619815.4;transcript_id=HG002_chrY_T0000783;gene_id=HG002_chrY_G0000240;Parent=HG002_chrY_T0000783;transcript_name=HG002_chrY_T0000783;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000783:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9365066	9366557	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=ENST00000619815.4;transcript_id=HG002_chrY_T0000783;gene_id=HG002_chrY_G0000240;Parent=HG002_chrY_T0000783;transcript_name=HG002_chrY_T0000783;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000783:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9366558	9366703	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=ENST00000619815.4;transcript_id=HG002_chrY_T0000783;gene_id=HG002_chrY_G0000240;Parent=HG002_chrY_T0000783;transcript_name=HG002_chrY_T0000783;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000783:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9366704	9366789	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=ENST00000619815.4;transcript_id=HG002_chrY_T0000783;gene_id=HG002_chrY_G0000240;Parent=HG002_chrY_T0000783;transcript_name=HG002_chrY_T0000783;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000783:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9366790	9366891	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=ENST00000619815.4;transcript_id=HG002_chrY_T0000783;gene_id=HG002_chrY_G0000240;Parent=HG002_chrY_T0000783;transcript_name=HG002_chrY_T0000783;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000783:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9366558	9368550	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_15;gene_id=HG002_chrY_G0000241;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000241;Name=FAM197Y5
HG002_chrY	CAT	transcript	9366558	9368550	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000784;gene_id=HG002_chrY_G0000241;Parent=HG002_chrY_G0000241;transcript_name=HG002_chrY_T0000784;gene_name=FAM197Y5;ID=HG002_chrY_T0000784;Name=FAM197Y5
HG002_chrY	CAT	exon	9366558	9366703	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000784;gene_id=HG002_chrY_G0000241;Parent=HG002_chrY_T0000784;transcript_name=HG002_chrY_T0000784;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000784:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9366704	9368239	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000784;gene_id=HG002_chrY_G0000241;Parent=HG002_chrY_T0000784;transcript_name=HG002_chrY_T0000784;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000784:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9368240	9368550	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000784;gene_id=HG002_chrY_G0000241;Parent=HG002_chrY_T0000784;transcript_name=HG002_chrY_T0000784;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000784:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9369504	9372318	.	+	.	source_gene_common_name=TSPY4;source_gene=ENSG00000233803.9;gene_id=HG002_chrY_G0000242;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG002_chrY_G0000242;Name=TSPY4
HG002_chrY	CAT	transcript	9369504	9372197	100	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000785;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_G0000242;transcript_name=HG002_chrY_T0000785;gene_name=TSPY4;ID=HG002_chrY_T0000785;Name=TSPY4
HG002_chrY	CAT	exon	9369504	9369636	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000785;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000785;transcript_name=HG002_chrY_T0000785;gene_name=TSPY4;ID=exon:HG002_chrY_T0000785:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9369550	9369636	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000785;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000785;transcript_name=HG002_chrY_T0000785;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000785:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9369550	9369552	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000785;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000785;transcript_name=HG002_chrY_T0000785;gene_name=TSPY4;ID=start_codon:HG002_chrY_T0000785;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9369637	9369915	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000785;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000785;transcript_name=HG002_chrY_T0000785;gene_name=TSPY4;ID=intron:HG002_chrY_T0000785:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9369916	9370053	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000785;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000785;transcript_name=HG002_chrY_T0000785;gene_name=TSPY4;ID=exon:HG002_chrY_T0000785:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9369916	9370053	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000785;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000785;transcript_name=HG002_chrY_T0000785;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000785:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9370054	9370660	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000785;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000785;transcript_name=HG002_chrY_T0000785;gene_name=TSPY4;ID=intron:HG002_chrY_T0000785:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9370661	9370738	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000785;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000785;transcript_name=HG002_chrY_T0000785;gene_name=TSPY4;ID=exon:HG002_chrY_T0000785:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9370661	9370738	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000785;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000785;transcript_name=HG002_chrY_T0000785;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000785:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9370739	9370866	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000785;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000785;transcript_name=HG002_chrY_T0000785;gene_name=TSPY4;ID=intron:HG002_chrY_T0000785:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9370867	9370978	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000785;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000785;transcript_name=HG002_chrY_T0000785;gene_name=TSPY4;ID=exon:HG002_chrY_T0000785:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9370867	9370978	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000785;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000785;transcript_name=HG002_chrY_T0000785;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000785:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9370979	9371079	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000785;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000785;transcript_name=HG002_chrY_T0000785;gene_name=TSPY4;ID=intron:HG002_chrY_T0000785:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9371080	9371225	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000785;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000785;transcript_name=HG002_chrY_T0000785;gene_name=TSPY4;ID=exon:HG002_chrY_T0000785:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9371080	9371225	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000785;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000785;transcript_name=HG002_chrY_T0000785;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000785:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9371226	9371331	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000785;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000785;transcript_name=HG002_chrY_T0000785;gene_name=TSPY4;ID=intron:HG002_chrY_T0000785:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9371332	9371413	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000785;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000785;transcript_name=HG002_chrY_T0000785;gene_name=TSPY4;ID=exon:HG002_chrY_T0000785:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9371332	9371413	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000785;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000785;transcript_name=HG002_chrY_T0000785;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000785:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9371414	9372107	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000785;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000785;transcript_name=HG002_chrY_T0000785;gene_name=TSPY4;ID=intron:HG002_chrY_T0000785:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9372108	9372197	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000785;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000785;transcript_name=HG002_chrY_T0000785;gene_name=TSPY4;ID=exon:HG002_chrY_T0000785:6;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9372108	9372130	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000785;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000785;transcript_name=HG002_chrY_T0000785;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000785:6;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9372128	9372130	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000785;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000785;transcript_name=HG002_chrY_T0000785;gene_name=TSPY4;ID=stop_codon:HG002_chrY_T0000785;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9369504	9372318	100	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000786;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_G0000242;transcript_name=HG002_chrY_T0000786;gene_name=TSPY4;ID=HG002_chrY_T0000786;Name=TSPY4
HG002_chrY	CAT	exon	9369504	9370053	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000786;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000786;transcript_name=HG002_chrY_T0000786;gene_name=TSPY4;ID=exon:HG002_chrY_T0000786:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9369550	9370053	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000786;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000786;transcript_name=HG002_chrY_T0000786;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000786:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9369550	9369552	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000786;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000786;transcript_name=HG002_chrY_T0000786;gene_name=TSPY4;ID=start_codon:HG002_chrY_T0000786;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9370054	9370660	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000786;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000786;transcript_name=HG002_chrY_T0000786;gene_name=TSPY4;ID=intron:HG002_chrY_T0000786:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9370661	9370738	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000786;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000786;transcript_name=HG002_chrY_T0000786;gene_name=TSPY4;ID=exon:HG002_chrY_T0000786:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9370661	9370738	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000786;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000786;transcript_name=HG002_chrY_T0000786;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000786:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9370739	9370866	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000786;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000786;transcript_name=HG002_chrY_T0000786;gene_name=TSPY4;ID=intron:HG002_chrY_T0000786:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9370867	9370978	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000786;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000786;transcript_name=HG002_chrY_T0000786;gene_name=TSPY4;ID=exon:HG002_chrY_T0000786:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9370867	9370978	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000786;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000786;transcript_name=HG002_chrY_T0000786;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000786:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9370979	9371079	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000786;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000786;transcript_name=HG002_chrY_T0000786;gene_name=TSPY4;ID=intron:HG002_chrY_T0000786:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9371080	9371225	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000786;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000786;transcript_name=HG002_chrY_T0000786;gene_name=TSPY4;ID=exon:HG002_chrY_T0000786:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9371080	9371225	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000786;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000786;transcript_name=HG002_chrY_T0000786;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000786:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9371226	9371331	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000786;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000786;transcript_name=HG002_chrY_T0000786;gene_name=TSPY4;ID=intron:HG002_chrY_T0000786:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9371332	9371413	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000786;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000786;transcript_name=HG002_chrY_T0000786;gene_name=TSPY4;ID=exon:HG002_chrY_T0000786:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9371332	9371413	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000786;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000786;transcript_name=HG002_chrY_T0000786;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000786:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9371414	9372107	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000786;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000786;transcript_name=HG002_chrY_T0000786;gene_name=TSPY4;ID=intron:HG002_chrY_T0000786:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9372108	9372318	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000786;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000786;transcript_name=HG002_chrY_T0000786;gene_name=TSPY4;ID=exon:HG002_chrY_T0000786:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9372108	9372130	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000786;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000786;transcript_name=HG002_chrY_T0000786;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000786:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9372128	9372130	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000786;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000786;transcript_name=HG002_chrY_T0000786;gene_name=TSPY4;ID=stop_codon:HG002_chrY_T0000786;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9369550	9372317	100	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000787;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_G0000242;transcript_name=HG002_chrY_T0000787;gene_name=TSPY4;ID=HG002_chrY_T0000787;Name=TSPY4
HG002_chrY	CAT	exon	9369550	9370053	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000787;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000787;transcript_name=HG002_chrY_T0000787;gene_name=TSPY4;ID=exon:HG002_chrY_T0000787:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9369550	9370053	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000787;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000787;transcript_name=HG002_chrY_T0000787;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000787:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9369550	9369552	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000787;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000787;transcript_name=HG002_chrY_T0000787;gene_name=TSPY4;ID=start_codon:HG002_chrY_T0000787;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9370054	9370660	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000787;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000787;transcript_name=HG002_chrY_T0000787;gene_name=TSPY4;ID=intron:HG002_chrY_T0000787:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9370661	9370738	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000787;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000787;transcript_name=HG002_chrY_T0000787;gene_name=TSPY4;ID=exon:HG002_chrY_T0000787:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9370661	9370738	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000787;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000787;transcript_name=HG002_chrY_T0000787;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000787:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9370739	9370866	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000787;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000787;transcript_name=HG002_chrY_T0000787;gene_name=TSPY4;ID=intron:HG002_chrY_T0000787:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9370867	9370978	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000787;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000787;transcript_name=HG002_chrY_T0000787;gene_name=TSPY4;ID=exon:HG002_chrY_T0000787:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9370867	9370978	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000787;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000787;transcript_name=HG002_chrY_T0000787;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000787:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9370979	9371079	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000787;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000787;transcript_name=HG002_chrY_T0000787;gene_name=TSPY4;ID=intron:HG002_chrY_T0000787:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9371080	9371225	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000787;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000787;transcript_name=HG002_chrY_T0000787;gene_name=TSPY4;ID=exon:HG002_chrY_T0000787:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9371080	9371225	.	+	2	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000787;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000787;transcript_name=HG002_chrY_T0000787;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000787:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9371226	9371320	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000787;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000787;transcript_name=HG002_chrY_T0000787;gene_name=TSPY4;ID=intron:HG002_chrY_T0000787:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9371321	9371413	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000787;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000787;transcript_name=HG002_chrY_T0000787;gene_name=TSPY4;ID=exon:HG002_chrY_T0000787:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9371321	9371383	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000787;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000787;transcript_name=HG002_chrY_T0000787;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000787:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9371381	9371383	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000787;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000787;transcript_name=HG002_chrY_T0000787;gene_name=TSPY4;ID=stop_codon:HG002_chrY_T0000787;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9371414	9372107	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000787;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000787;transcript_name=HG002_chrY_T0000787;gene_name=TSPY4;ID=intron:HG002_chrY_T0000787:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9372108	9372317	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000787;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000787;transcript_name=HG002_chrY_T0000787;gene_name=TSPY4;ID=exon:HG002_chrY_T0000787:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9369550	9372324	1000	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000788;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_G0000242;transcript_name=HG002_chrY_T0000788;gene_name=TSPY4;ID=HG002_chrY_T0000788;Name=TSPY4
HG002_chrY	CAT	exon	9369550	9370053	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000788;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000788;transcript_name=HG002_chrY_T0000788;gene_name=TSPY4;ID=exon:HG002_chrY_T0000788:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9370054	9370660	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000788;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000788;transcript_name=HG002_chrY_T0000788;gene_name=TSPY4;ID=intron:HG002_chrY_T0000788:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9370661	9370738	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000788;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000788;transcript_name=HG002_chrY_T0000788;gene_name=TSPY4;ID=exon:HG002_chrY_T0000788:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9370739	9370866	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000788;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000788;transcript_name=HG002_chrY_T0000788;gene_name=TSPY4;ID=intron:HG002_chrY_T0000788:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9370867	9371413	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000788;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000788;transcript_name=HG002_chrY_T0000788;gene_name=TSPY4;ID=exon:HG002_chrY_T0000788:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9371414	9371540	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000788;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000788;transcript_name=HG002_chrY_T0000788;gene_name=TSPY4;ID=intron:HG002_chrY_T0000788:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9371541	9372324	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000788;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000788;transcript_name=HG002_chrY_T0000788;gene_name=TSPY4;ID=exon:HG002_chrY_T0000788:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9370928	9372309	1000	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000789;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_G0000242;transcript_name=HG002_chrY_T0000789;gene_name=TSPY4;ID=HG002_chrY_T0000789;Name=TSPY4
HG002_chrY	CAT	exon	9370928	9371225	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000789;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000789;transcript_name=HG002_chrY_T0000789;gene_name=TSPY4;ID=exon:HG002_chrY_T0000789:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9371226	9371320	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000789;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000789;transcript_name=HG002_chrY_T0000789;gene_name=TSPY4;ID=intron:HG002_chrY_T0000789:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9371321	9371413	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000789;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000789;transcript_name=HG002_chrY_T0000789;gene_name=TSPY4;ID=exon:HG002_chrY_T0000789:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9371414	9372107	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000789;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000789;transcript_name=HG002_chrY_T0000789;gene_name=TSPY4;ID=intron:HG002_chrY_T0000789:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9372108	9372309	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000789;gene_id=HG002_chrY_G0000242;Parent=HG002_chrY_T0000789;transcript_name=HG002_chrY_T0000789;gene_name=TSPY4;ID=exon:HG002_chrY_T0000789:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9381481	9387229	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=HG002_chrY_G0000243;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000243;Name=FAM197Y5
HG002_chrY	CAT	transcript	9381481	9387229	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000790;gene_id=HG002_chrY_G0000243;Parent=HG002_chrY_G0000243;transcript_name=HG002_chrY_T0000790;gene_name=FAM197Y5;ID=HG002_chrY_T0000790;Name=FAM197Y5
HG002_chrY	CAT	exon	9381481	9381670	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000790;gene_id=HG002_chrY_G0000243;Parent=HG002_chrY_T0000790;transcript_name=HG002_chrY_T0000790;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000790:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9381671	9385224	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000790;gene_id=HG002_chrY_G0000243;Parent=HG002_chrY_T0000790;transcript_name=HG002_chrY_T0000790;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000790:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9385225	9385310	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000790;gene_id=HG002_chrY_G0000243;Parent=HG002_chrY_T0000790;transcript_name=HG002_chrY_T0000790;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000790:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9385311	9387115	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000790;gene_id=HG002_chrY_G0000243;Parent=HG002_chrY_T0000790;transcript_name=HG002_chrY_T0000790;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000790:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9387116	9387229	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000790;gene_id=HG002_chrY_G0000243;Parent=HG002_chrY_T0000790;transcript_name=HG002_chrY_T0000790;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000790:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9381611	9387217	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000791;gene_id=HG002_chrY_G0000243;Parent=HG002_chrY_G0000243;transcript_name=HG002_chrY_T0000791;gene_name=FAM197Y5;ID=HG002_chrY_T0000791;Name=FAM197Y5
HG002_chrY	CAT	exon	9381611	9381670	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000791;gene_id=HG002_chrY_G0000243;Parent=HG002_chrY_T0000791;transcript_name=HG002_chrY_T0000791;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000791:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9381671	9385224	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000791;gene_id=HG002_chrY_G0000243;Parent=HG002_chrY_T0000791;transcript_name=HG002_chrY_T0000791;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000791:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9385225	9385383	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000791;gene_id=HG002_chrY_G0000243;Parent=HG002_chrY_T0000791;transcript_name=HG002_chrY_T0000791;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000791:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9385384	9386883	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000791;gene_id=HG002_chrY_G0000243;Parent=HG002_chrY_T0000791;transcript_name=HG002_chrY_T0000791;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000791:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9386884	9387029	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000791;gene_id=HG002_chrY_G0000243;Parent=HG002_chrY_T0000791;transcript_name=HG002_chrY_T0000791;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000791:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9387030	9387115	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000791;gene_id=HG002_chrY_G0000243;Parent=HG002_chrY_T0000791;transcript_name=HG002_chrY_T0000791;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000791:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9387116	9387217	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000791;gene_id=HG002_chrY_G0000243;Parent=HG002_chrY_T0000791;transcript_name=HG002_chrY_T0000791;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000791:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9386884	9388876	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_1;gene_id=HG002_chrY_G0000244;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000244;Name=FAM197Y5
HG002_chrY	CAT	transcript	9386884	9388876	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000792;gene_id=HG002_chrY_G0000244;Parent=HG002_chrY_G0000244;transcript_name=HG002_chrY_T0000792;gene_name=FAM197Y5;ID=HG002_chrY_T0000792;Name=FAM197Y5
HG002_chrY	CAT	exon	9386884	9387029	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000792;gene_id=HG002_chrY_G0000244;Parent=HG002_chrY_T0000792;transcript_name=HG002_chrY_T0000792;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000792:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9387030	9388565	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000792;gene_id=HG002_chrY_G0000244;Parent=HG002_chrY_T0000792;transcript_name=HG002_chrY_T0000792;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000792:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9388566	9388876	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000792;gene_id=HG002_chrY_G0000244;Parent=HG002_chrY_T0000792;transcript_name=HG002_chrY_T0000792;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000792:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9389833	9392638	.	+	.	source_gene_common_name=ENSG00000301844;source_gene=ENSG00000301844.1_3;gene_id=HG002_chrY_G0000245;gene_biotype=lncRNA;gene_name=ENSG00000301844;gene_sources=liftoff;ID=HG002_chrY_G0000245;Name=ENSG00000301844
HG002_chrY	CAT	transcript	9389833	9392638	1000	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000793;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_G0000245;transcript_name=HG002_chrY_T0000793;gene_name=ENSG00000301844;ID=HG002_chrY_T0000793;Name=ENSG00000301844
HG002_chrY	CAT	exon	9389833	9390361	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000793;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000793;transcript_name=HG002_chrY_T0000793;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000793:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9390362	9390968	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000793;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000793;transcript_name=HG002_chrY_T0000793;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000793:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9390969	9391046	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000793;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000793;transcript_name=HG002_chrY_T0000793;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000793:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9391047	9391174	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000793;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000793;transcript_name=HG002_chrY_T0000793;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000793:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9391175	9391286	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000793;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000793;transcript_name=HG002_chrY_T0000793;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000793:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9391287	9391387	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000793;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000793;transcript_name=HG002_chrY_T0000793;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000793:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9391388	9391533	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000793;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000793;transcript_name=HG002_chrY_T0000793;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000793:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9391534	9391639	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000793;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000793;transcript_name=HG002_chrY_T0000793;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000793:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9391640	9391721	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000793;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000793;transcript_name=HG002_chrY_T0000793;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000793:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9391722	9392415	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000793;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000793;transcript_name=HG002_chrY_T0000793;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000793:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9392416	9392638	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000793;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000793;transcript_name=HG002_chrY_T0000793;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000793:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9389842	9392633	1000	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000794;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_G0000245;transcript_name=HG002_chrY_T0000794;gene_name=ENSG00000301844;ID=HG002_chrY_T0000794;Name=ENSG00000301844
HG002_chrY	CAT	exon	9389842	9390361	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000794;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000794;transcript_name=HG002_chrY_T0000794;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000794:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9390362	9390968	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000794;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000794;transcript_name=HG002_chrY_T0000794;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000794:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9390969	9391046	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000794;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000794;transcript_name=HG002_chrY_T0000794;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000794:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9391047	9391174	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000794;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000794;transcript_name=HG002_chrY_T0000794;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000794:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9391175	9391286	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000794;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000794;transcript_name=HG002_chrY_T0000794;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000794:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9391287	9391394	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000794;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000794;transcript_name=HG002_chrY_T0000794;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000794:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9391395	9391533	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000794;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000794;transcript_name=HG002_chrY_T0000794;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000794:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9391534	9391639	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000794;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000794;transcript_name=HG002_chrY_T0000794;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000794:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9391640	9391721	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000794;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000794;transcript_name=HG002_chrY_T0000794;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000794:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9391722	9392415	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000794;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000794;transcript_name=HG002_chrY_T0000794;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000794:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9392416	9392633	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000794;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000794;transcript_name=HG002_chrY_T0000794;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000794:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9389864	9392628	1000	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000795;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_G0000245;transcript_name=HG002_chrY_T0000795;gene_name=ENSG00000301844;ID=HG002_chrY_T0000795;Name=ENSG00000301844
HG002_chrY	CAT	exon	9389864	9390361	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000795;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000795;transcript_name=HG002_chrY_T0000795;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000795:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9390362	9390968	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000795;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000795;transcript_name=HG002_chrY_T0000795;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000795:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9390969	9391046	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000795;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000795;transcript_name=HG002_chrY_T0000795;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000795:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9391047	9391174	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000795;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000795;transcript_name=HG002_chrY_T0000795;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000795:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9391175	9391286	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000795;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000795;transcript_name=HG002_chrY_T0000795;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000795:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9391287	9391387	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000795;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000795;transcript_name=HG002_chrY_T0000795;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000795:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9391388	9391721	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000795;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000795;transcript_name=HG002_chrY_T0000795;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000795:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9391722	9392415	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000795;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000795;transcript_name=HG002_chrY_T0000795;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000795:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9392416	9392628	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000795;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000795;transcript_name=HG002_chrY_T0000795;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000795:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9389874	9392633	1000	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000796;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_G0000245;transcript_name=HG002_chrY_T0000796;gene_name=ENSG00000301844;ID=HG002_chrY_T0000796;Name=ENSG00000301844
HG002_chrY	CAT	exon	9389874	9390361	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000796;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000796;transcript_name=HG002_chrY_T0000796;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000796:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9390362	9390968	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000796;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000796;transcript_name=HG002_chrY_T0000796;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000796:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9390969	9391046	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000796;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000796;transcript_name=HG002_chrY_T0000796;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000796:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9391047	9391174	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000796;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000796;transcript_name=HG002_chrY_T0000796;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000796:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9391175	9391533	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000796;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000796;transcript_name=HG002_chrY_T0000796;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000796:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9391534	9391639	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000796;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000796;transcript_name=HG002_chrY_T0000796;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000796:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9391640	9391721	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000796;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000796;transcript_name=HG002_chrY_T0000796;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000796:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9391722	9392415	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000796;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000796;transcript_name=HG002_chrY_T0000796;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000796:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9392416	9392633	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000796;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000796;transcript_name=HG002_chrY_T0000796;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000796:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9389876	9392633	1000	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000798;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_G0000245;transcript_name=HG002_chrY_T0000798;gene_name=ENSG00000301844;ID=HG002_chrY_T0000798;Name=ENSG00000301844
HG002_chrY	CAT	exon	9389876	9390361	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000798;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000798;transcript_name=HG002_chrY_T0000798;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000798:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9390362	9390968	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000798;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000798;transcript_name=HG002_chrY_T0000798;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000798:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9390969	9391046	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000798;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000798;transcript_name=HG002_chrY_T0000798;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000798:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9391047	9391174	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000798;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000798;transcript_name=HG002_chrY_T0000798;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000798:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9391175	9391286	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000798;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000798;transcript_name=HG002_chrY_T0000798;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000798:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9391287	9391387	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000798;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000798;transcript_name=HG002_chrY_T0000798;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000798:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9391388	9391533	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000798;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000798;transcript_name=HG002_chrY_T0000798;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000798:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9391534	9391628	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000798;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000798;transcript_name=HG002_chrY_T0000798;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000798:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9391629	9391721	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000798;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000798;transcript_name=HG002_chrY_T0000798;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000798:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9391722	9392415	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000798;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000798;transcript_name=HG002_chrY_T0000798;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000798:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9392416	9392633	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000798;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000798;transcript_name=HG002_chrY_T0000798;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000798:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9389876	9392626	1000	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000799;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_G0000245;transcript_name=HG002_chrY_T0000799;gene_name=ENSG00000301844;ID=HG002_chrY_T0000799;Name=ENSG00000301844
HG002_chrY	CAT	exon	9389876	9390361	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000799;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000799;transcript_name=HG002_chrY_T0000799;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000799:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9390362	9390968	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000799;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000799;transcript_name=HG002_chrY_T0000799;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000799:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9390969	9391046	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000799;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000799;transcript_name=HG002_chrY_T0000799;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000799:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9391047	9391174	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000799;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000799;transcript_name=HG002_chrY_T0000799;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000799:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9391175	9391721	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000799;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000799;transcript_name=HG002_chrY_T0000799;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000799:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9391722	9392415	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000799;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000799;transcript_name=HG002_chrY_T0000799;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000799:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9392416	9392626	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000799;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000799;transcript_name=HG002_chrY_T0000799;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000799:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9389896	9392633	1000	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000800;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_G0000245;transcript_name=HG002_chrY_T0000800;gene_name=ENSG00000301844;ID=HG002_chrY_T0000800;Name=ENSG00000301844
HG002_chrY	CAT	exon	9389896	9390361	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000800;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000800;transcript_name=HG002_chrY_T0000800;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000800:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9390362	9390968	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000800;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000800;transcript_name=HG002_chrY_T0000800;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000800:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9390969	9391046	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000800;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000800;transcript_name=HG002_chrY_T0000800;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000800:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9391047	9391174	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000800;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000800;transcript_name=HG002_chrY_T0000800;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000800:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9391175	9391533	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000800;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000800;transcript_name=HG002_chrY_T0000800;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000800:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9391534	9391628	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000800;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000800;transcript_name=HG002_chrY_T0000800;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000800:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9391629	9391721	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000800;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000800;transcript_name=HG002_chrY_T0000800;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000800:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9391722	9392415	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000800;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000800;transcript_name=HG002_chrY_T0000800;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000800:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9392416	9392633	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000800;gene_id=HG002_chrY_G0000245;Parent=HG002_chrY_T0000800;transcript_name=HG002_chrY_T0000800;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000800:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9389876	9392626	.	+	.	source_gene_common_name=TSPY7P;source_gene=ENSG00000188656.8_3;gene_id=HG002_chrY_G0000246;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY7P;gene_sources=liftoff;ID=HG002_chrY_G0000246;Name=TSPY7P
HG002_chrY	CAT	transcript	9389876	9392626	1000	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000797;gene_id=HG002_chrY_G0000246;Parent=HG002_chrY_G0000246;transcript_name=HG002_chrY_T0000797;gene_name=TSPY7P;ID=HG002_chrY_T0000797;Name=TSPY7P
HG002_chrY	CAT	exon	9389876	9390361	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000797;gene_id=HG002_chrY_G0000246;Parent=HG002_chrY_T0000797;transcript_name=HG002_chrY_T0000797;gene_name=TSPY7P;ID=exon:HG002_chrY_T0000797:0;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9390362	9390968	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000797;gene_id=HG002_chrY_G0000246;Parent=HG002_chrY_T0000797;transcript_name=HG002_chrY_T0000797;gene_name=TSPY7P;ID=intron:HG002_chrY_T0000797:0;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9390969	9391046	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000797;gene_id=HG002_chrY_G0000246;Parent=HG002_chrY_T0000797;transcript_name=HG002_chrY_T0000797;gene_name=TSPY7P;ID=exon:HG002_chrY_T0000797:1;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9391047	9391174	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000797;gene_id=HG002_chrY_G0000246;Parent=HG002_chrY_T0000797;transcript_name=HG002_chrY_T0000797;gene_name=TSPY7P;ID=intron:HG002_chrY_T0000797:1;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9391175	9391286	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000797;gene_id=HG002_chrY_G0000246;Parent=HG002_chrY_T0000797;transcript_name=HG002_chrY_T0000797;gene_name=TSPY7P;ID=exon:HG002_chrY_T0000797:2;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9391287	9391387	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000797;gene_id=HG002_chrY_G0000246;Parent=HG002_chrY_T0000797;transcript_name=HG002_chrY_T0000797;gene_name=TSPY7P;ID=intron:HG002_chrY_T0000797:2;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9391388	9391533	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000797;gene_id=HG002_chrY_G0000246;Parent=HG002_chrY_T0000797;transcript_name=HG002_chrY_T0000797;gene_name=TSPY7P;ID=exon:HG002_chrY_T0000797:3;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9391534	9391639	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000797;gene_id=HG002_chrY_G0000246;Parent=HG002_chrY_T0000797;transcript_name=HG002_chrY_T0000797;gene_name=TSPY7P;ID=intron:HG002_chrY_T0000797:3;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9391640	9391721	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000797;gene_id=HG002_chrY_G0000246;Parent=HG002_chrY_T0000797;transcript_name=HG002_chrY_T0000797;gene_name=TSPY7P;ID=exon:HG002_chrY_T0000797:4;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9391722	9392415	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000797;gene_id=HG002_chrY_G0000246;Parent=HG002_chrY_T0000797;transcript_name=HG002_chrY_T0000797;gene_name=TSPY7P;ID=intron:HG002_chrY_T0000797:4;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9392416	9392626	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000797;gene_id=HG002_chrY_G0000246;Parent=HG002_chrY_T0000797;transcript_name=HG002_chrY_T0000797;gene_name=TSPY7P;ID=exon:HG002_chrY_T0000797:5;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9399838	9407527	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1_1;gene_id=HG002_chrY_G0000247;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG002_chrY_G0000247;Name=FAM197Y9
HG002_chrY	CAT	transcript	9399838	9407527	1000	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000801;gene_id=HG002_chrY_G0000247;Parent=HG002_chrY_G0000247;transcript_name=HG002_chrY_T0000801;gene_name=FAM197Y9;ID=HG002_chrY_T0000801;Name=FAM197Y9
HG002_chrY	CAT	exon	9399838	9401965	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000801;gene_id=HG002_chrY_G0000247;Parent=HG002_chrY_T0000801;transcript_name=HG002_chrY_T0000801;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000801:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9401966	9405516	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000801;gene_id=HG002_chrY_G0000247;Parent=HG002_chrY_T0000801;transcript_name=HG002_chrY_T0000801;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000801:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9405517	9405602	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000801;gene_id=HG002_chrY_G0000247;Parent=HG002_chrY_T0000801;transcript_name=HG002_chrY_T0000801;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000801:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9405603	9407407	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000801;gene_id=HG002_chrY_G0000247;Parent=HG002_chrY_T0000801;transcript_name=HG002_chrY_T0000801;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000801:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9407408	9407527	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000801;gene_id=HG002_chrY_G0000247;Parent=HG002_chrY_T0000801;transcript_name=HG002_chrY_T0000801;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000801:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9401906	9407509	1000	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000802;gene_id=HG002_chrY_G0000247;Parent=HG002_chrY_G0000247;transcript_name=HG002_chrY_T0000802;gene_name=FAM197Y9;ID=HG002_chrY_T0000802;Name=FAM197Y9
HG002_chrY	CAT	exon	9401906	9401965	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000802;gene_id=HG002_chrY_G0000247;Parent=HG002_chrY_T0000802;transcript_name=HG002_chrY_T0000802;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000802:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9401966	9405516	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000802;gene_id=HG002_chrY_G0000247;Parent=HG002_chrY_T0000802;transcript_name=HG002_chrY_T0000802;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000802:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9405517	9405675	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000802;gene_id=HG002_chrY_G0000247;Parent=HG002_chrY_T0000802;transcript_name=HG002_chrY_T0000802;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000802:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9405676	9407175	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000802;gene_id=HG002_chrY_G0000247;Parent=HG002_chrY_T0000802;transcript_name=HG002_chrY_T0000802;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000802:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9407176	9407321	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000802;gene_id=HG002_chrY_G0000247;Parent=HG002_chrY_T0000802;transcript_name=HG002_chrY_T0000802;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000802:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9407322	9407407	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000802;gene_id=HG002_chrY_G0000247;Parent=HG002_chrY_T0000802;transcript_name=HG002_chrY_T0000802;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000802:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9407408	9407509	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000802;gene_id=HG002_chrY_G0000247;Parent=HG002_chrY_T0000802;transcript_name=HG002_chrY_T0000802;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000802:3;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9407176	9409169	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9_6;gene_id=HG002_chrY_G0000248;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG002_chrY_G0000248;Name=FAM197Y9
HG002_chrY	CAT	transcript	9407176	9409169	1000	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000803;gene_id=HG002_chrY_G0000248;Parent=HG002_chrY_G0000248;transcript_name=HG002_chrY_T0000803;gene_name=FAM197Y9;ID=HG002_chrY_T0000803;Name=FAM197Y9
HG002_chrY	CAT	exon	9407176	9407321	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000803;gene_id=HG002_chrY_G0000248;Parent=HG002_chrY_T0000803;transcript_name=HG002_chrY_T0000803;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000803:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9407322	9407433	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000803;gene_id=HG002_chrY_G0000248;Parent=HG002_chrY_T0000803;transcript_name=HG002_chrY_T0000803;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000803:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9407434	9407517	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000803;gene_id=HG002_chrY_G0000248;Parent=HG002_chrY_T0000803;transcript_name=HG002_chrY_T0000803;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000803:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9407518	9408859	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000803;gene_id=HG002_chrY_G0000248;Parent=HG002_chrY_T0000803;transcript_name=HG002_chrY_T0000803;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000803:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9408860	9409169	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000803;gene_id=HG002_chrY_G0000248;Parent=HG002_chrY_T0000803;transcript_name=HG002_chrY_T0000803;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000803:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9410125	9412930	.	+	.	source_gene_common_name=ENSG00000301844;source_gene=ENSG00000301844.1;gene_id=HG002_chrY_G0000249;gene_biotype=lncRNA;gene_name=ENSG00000301844;gene_sources=liftoff;ID=HG002_chrY_G0000249;Name=ENSG00000301844
HG002_chrY	CAT	transcript	9410125	9412930	1000	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000804;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_G0000249;transcript_name=HG002_chrY_T0000804;gene_name=ENSG00000301844;ID=HG002_chrY_T0000804;Name=ENSG00000301844
HG002_chrY	CAT	exon	9410125	9410653	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000804;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000804;transcript_name=HG002_chrY_T0000804;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000804:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9410654	9411260	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000804;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000804;transcript_name=HG002_chrY_T0000804;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000804:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9411261	9411338	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000804;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000804;transcript_name=HG002_chrY_T0000804;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000804:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9411339	9411466	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000804;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000804;transcript_name=HG002_chrY_T0000804;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000804:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9411467	9411578	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000804;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000804;transcript_name=HG002_chrY_T0000804;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000804:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9411579	9411679	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000804;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000804;transcript_name=HG002_chrY_T0000804;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000804:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9411680	9411825	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000804;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000804;transcript_name=HG002_chrY_T0000804;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000804:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9411826	9411931	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000804;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000804;transcript_name=HG002_chrY_T0000804;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000804:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9411932	9412013	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000804;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000804;transcript_name=HG002_chrY_T0000804;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000804:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9412014	9412707	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000804;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000804;transcript_name=HG002_chrY_T0000804;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000804:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9412708	9412930	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000804;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000804;transcript_name=HG002_chrY_T0000804;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000804:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9410134	9412925	1000	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000805;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_G0000249;transcript_name=HG002_chrY_T0000805;gene_name=ENSG00000301844;ID=HG002_chrY_T0000805;Name=ENSG00000301844
HG002_chrY	CAT	exon	9410134	9410653	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000805;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000805;transcript_name=HG002_chrY_T0000805;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000805:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9410654	9411260	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000805;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000805;transcript_name=HG002_chrY_T0000805;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000805:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9411261	9411338	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000805;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000805;transcript_name=HG002_chrY_T0000805;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000805:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9411339	9411466	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000805;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000805;transcript_name=HG002_chrY_T0000805;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000805:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9411467	9411578	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000805;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000805;transcript_name=HG002_chrY_T0000805;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000805:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9411579	9411686	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000805;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000805;transcript_name=HG002_chrY_T0000805;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000805:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9411687	9411825	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000805;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000805;transcript_name=HG002_chrY_T0000805;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000805:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9411826	9411931	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000805;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000805;transcript_name=HG002_chrY_T0000805;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000805:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9411932	9412013	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000805;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000805;transcript_name=HG002_chrY_T0000805;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000805:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9412014	9412707	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000805;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000805;transcript_name=HG002_chrY_T0000805;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000805:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9412708	9412925	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000805;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000805;transcript_name=HG002_chrY_T0000805;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000805:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9410156	9412920	1000	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000806;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_G0000249;transcript_name=HG002_chrY_T0000806;gene_name=ENSG00000301844;ID=HG002_chrY_T0000806;Name=ENSG00000301844
HG002_chrY	CAT	exon	9410156	9410653	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000806;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000806;transcript_name=HG002_chrY_T0000806;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000806:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9410654	9411260	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000806;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000806;transcript_name=HG002_chrY_T0000806;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000806:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9411261	9411338	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000806;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000806;transcript_name=HG002_chrY_T0000806;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000806:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9411339	9411466	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000806;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000806;transcript_name=HG002_chrY_T0000806;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000806:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9411467	9411578	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000806;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000806;transcript_name=HG002_chrY_T0000806;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000806:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9411579	9411679	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000806;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000806;transcript_name=HG002_chrY_T0000806;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000806:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9411680	9412013	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000806;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000806;transcript_name=HG002_chrY_T0000806;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000806:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9412014	9412707	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000806;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000806;transcript_name=HG002_chrY_T0000806;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000806:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9412708	9412920	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000806;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000806;transcript_name=HG002_chrY_T0000806;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000806:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9410166	9412925	1000	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000807;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_G0000249;transcript_name=HG002_chrY_T0000807;gene_name=ENSG00000301844;ID=HG002_chrY_T0000807;Name=ENSG00000301844
HG002_chrY	CAT	exon	9410166	9410653	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000807;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000807;transcript_name=HG002_chrY_T0000807;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000807:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9410654	9411260	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000807;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000807;transcript_name=HG002_chrY_T0000807;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000807:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9411261	9411338	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000807;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000807;transcript_name=HG002_chrY_T0000807;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000807:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9411339	9411466	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000807;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000807;transcript_name=HG002_chrY_T0000807;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000807:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9411467	9411825	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000807;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000807;transcript_name=HG002_chrY_T0000807;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000807:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9411826	9411931	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000807;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000807;transcript_name=HG002_chrY_T0000807;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000807:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9411932	9412013	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000807;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000807;transcript_name=HG002_chrY_T0000807;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000807:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9412014	9412707	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000807;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000807;transcript_name=HG002_chrY_T0000807;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000807:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9412708	9412925	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000807;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000807;transcript_name=HG002_chrY_T0000807;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000807:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9410168	9412925	1000	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000808;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_G0000249;transcript_name=HG002_chrY_T0000808;gene_name=ENSG00000301844;ID=HG002_chrY_T0000808;Name=ENSG00000301844
HG002_chrY	CAT	exon	9410168	9410653	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000808;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000808;transcript_name=HG002_chrY_T0000808;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000808:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9410654	9411260	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000808;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000808;transcript_name=HG002_chrY_T0000808;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000808:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9411261	9411338	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000808;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000808;transcript_name=HG002_chrY_T0000808;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000808:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9411339	9411466	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000808;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000808;transcript_name=HG002_chrY_T0000808;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000808:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9411467	9411578	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000808;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000808;transcript_name=HG002_chrY_T0000808;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000808:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9411579	9411679	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000808;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000808;transcript_name=HG002_chrY_T0000808;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000808:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9411680	9411825	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000808;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000808;transcript_name=HG002_chrY_T0000808;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000808:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9411826	9411920	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000808;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000808;transcript_name=HG002_chrY_T0000808;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000808:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9411921	9412013	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000808;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000808;transcript_name=HG002_chrY_T0000808;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000808:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9412014	9412707	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000808;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000808;transcript_name=HG002_chrY_T0000808;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000808:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9412708	9412925	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000808;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000808;transcript_name=HG002_chrY_T0000808;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000808:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9410168	9412918	1000	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000809;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_G0000249;transcript_name=HG002_chrY_T0000809;gene_name=ENSG00000301844;ID=HG002_chrY_T0000809;Name=ENSG00000301844
HG002_chrY	CAT	exon	9410168	9410653	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000809;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000809;transcript_name=HG002_chrY_T0000809;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000809:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9410654	9411260	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000809;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000809;transcript_name=HG002_chrY_T0000809;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000809:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9411261	9411338	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000809;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000809;transcript_name=HG002_chrY_T0000809;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000809:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9411339	9411466	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000809;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000809;transcript_name=HG002_chrY_T0000809;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000809:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9411467	9412013	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000809;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000809;transcript_name=HG002_chrY_T0000809;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000809:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9412014	9412707	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000809;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000809;transcript_name=HG002_chrY_T0000809;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000809:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9412708	9412918	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000809;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000809;transcript_name=HG002_chrY_T0000809;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000809:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9410188	9412925	1000	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000811;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_G0000249;transcript_name=HG002_chrY_T0000811;gene_name=ENSG00000301844;ID=HG002_chrY_T0000811;Name=ENSG00000301844
HG002_chrY	CAT	exon	9410188	9410653	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000811;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000811;transcript_name=HG002_chrY_T0000811;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000811:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9410654	9411260	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000811;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000811;transcript_name=HG002_chrY_T0000811;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000811:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9411261	9411338	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000811;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000811;transcript_name=HG002_chrY_T0000811;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000811:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9411339	9411466	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000811;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000811;transcript_name=HG002_chrY_T0000811;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000811:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9411467	9411825	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000811;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000811;transcript_name=HG002_chrY_T0000811;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000811:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9411826	9411920	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000811;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000811;transcript_name=HG002_chrY_T0000811;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000811:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9411921	9412013	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000811;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000811;transcript_name=HG002_chrY_T0000811;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000811:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9412014	9412707	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000811;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000811;transcript_name=HG002_chrY_T0000811;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000811:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9412708	9412925	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000811;gene_id=HG002_chrY_G0000249;Parent=HG002_chrY_T0000811;transcript_name=HG002_chrY_T0000811;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000811:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9410168	9412918	.	+	.	source_gene_common_name=TSPY7P;source_gene=ENSG00000188656.8;gene_id=HG002_chrY_G0000250;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY7P;gene_sources=liftoff;ID=HG002_chrY_G0000250;Name=TSPY7P
HG002_chrY	CAT	transcript	9410168	9412918	1000	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000810;gene_id=HG002_chrY_G0000250;Parent=HG002_chrY_G0000250;transcript_name=HG002_chrY_T0000810;gene_name=TSPY7P;ID=HG002_chrY_T0000810;Name=TSPY7P
HG002_chrY	CAT	exon	9410168	9410653	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000810;gene_id=HG002_chrY_G0000250;Parent=HG002_chrY_T0000810;transcript_name=HG002_chrY_T0000810;gene_name=TSPY7P;ID=exon:HG002_chrY_T0000810:0;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9410654	9411260	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000810;gene_id=HG002_chrY_G0000250;Parent=HG002_chrY_T0000810;transcript_name=HG002_chrY_T0000810;gene_name=TSPY7P;ID=intron:HG002_chrY_T0000810:0;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9411261	9411338	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000810;gene_id=HG002_chrY_G0000250;Parent=HG002_chrY_T0000810;transcript_name=HG002_chrY_T0000810;gene_name=TSPY7P;ID=exon:HG002_chrY_T0000810:1;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9411339	9411466	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000810;gene_id=HG002_chrY_G0000250;Parent=HG002_chrY_T0000810;transcript_name=HG002_chrY_T0000810;gene_name=TSPY7P;ID=intron:HG002_chrY_T0000810:1;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9411467	9411578	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000810;gene_id=HG002_chrY_G0000250;Parent=HG002_chrY_T0000810;transcript_name=HG002_chrY_T0000810;gene_name=TSPY7P;ID=exon:HG002_chrY_T0000810:2;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9411579	9411679	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000810;gene_id=HG002_chrY_G0000250;Parent=HG002_chrY_T0000810;transcript_name=HG002_chrY_T0000810;gene_name=TSPY7P;ID=intron:HG002_chrY_T0000810:2;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9411680	9411825	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000810;gene_id=HG002_chrY_G0000250;Parent=HG002_chrY_T0000810;transcript_name=HG002_chrY_T0000810;gene_name=TSPY7P;ID=exon:HG002_chrY_T0000810:3;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9411826	9411931	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000810;gene_id=HG002_chrY_G0000250;Parent=HG002_chrY_T0000810;transcript_name=HG002_chrY_T0000810;gene_name=TSPY7P;ID=intron:HG002_chrY_T0000810:3;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9411932	9412013	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000810;gene_id=HG002_chrY_G0000250;Parent=HG002_chrY_T0000810;transcript_name=HG002_chrY_T0000810;gene_name=TSPY7P;ID=exon:HG002_chrY_T0000810:4;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9412014	9412707	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000810;gene_id=HG002_chrY_G0000250;Parent=HG002_chrY_T0000810;transcript_name=HG002_chrY_T0000810;gene_name=TSPY7P;ID=intron:HG002_chrY_T0000810:4;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9412708	9412918	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000810;gene_id=HG002_chrY_G0000250;Parent=HG002_chrY_T0000810;transcript_name=HG002_chrY_T0000810;gene_name=TSPY7P;ID=exon:HG002_chrY_T0000810:5;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9420120	9428018	.	-	.	source_gene_common_name=FAM197Y8;source_gene=ENSG00000293362.1;gene_id=HG002_chrY_G0000251;gene_biotype=lncRNA;gene_name=FAM197Y8;gene_sources=liftoff;ID=HG002_chrY_G0000251;Name=FAM197Y8
HG002_chrY	CAT	transcript	9420120	9428018	1000	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000812;gene_id=HG002_chrY_G0000251;Parent=HG002_chrY_G0000251;transcript_name=HG002_chrY_T0000812;gene_name=FAM197Y8;ID=HG002_chrY_T0000812;Name=FAM197Y8
HG002_chrY	CAT	exon	9420120	9422247	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000812;gene_id=HG002_chrY_G0000251;Parent=HG002_chrY_T0000812;transcript_name=HG002_chrY_T0000812;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000812:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9422248	9425798	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000812;gene_id=HG002_chrY_G0000251;Parent=HG002_chrY_T0000812;transcript_name=HG002_chrY_T0000812;gene_name=FAM197Y8;ID=intron:HG002_chrY_T0000812:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9425799	9425884	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000812;gene_id=HG002_chrY_G0000251;Parent=HG002_chrY_T0000812;transcript_name=HG002_chrY_T0000812;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000812:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9425885	9427697	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000812;gene_id=HG002_chrY_G0000251;Parent=HG002_chrY_T0000812;transcript_name=HG002_chrY_T0000812;gene_name=FAM197Y8;ID=intron:HG002_chrY_T0000812:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9427698	9427807	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000812;gene_id=HG002_chrY_G0000251;Parent=HG002_chrY_T0000812;transcript_name=HG002_chrY_T0000812;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000812:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9427808	9428003	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000812;gene_id=HG002_chrY_G0000251;Parent=HG002_chrY_T0000812;transcript_name=HG002_chrY_T0000812;gene_name=FAM197Y8;ID=intron:HG002_chrY_T0000812:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9428004	9428018	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000812;gene_id=HG002_chrY_G0000251;Parent=HG002_chrY_T0000812;transcript_name=HG002_chrY_T0000812;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000812:3;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9422187	9427799	1000	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000813;gene_id=HG002_chrY_G0000251;Parent=HG002_chrY_G0000251;transcript_name=HG002_chrY_T0000813;gene_name=FAM197Y8;ID=HG002_chrY_T0000813;Name=FAM197Y8
HG002_chrY	CAT	exon	9422187	9422247	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000813;gene_id=HG002_chrY_G0000251;Parent=HG002_chrY_T0000813;transcript_name=HG002_chrY_T0000813;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000813:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9422248	9425798	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000813;gene_id=HG002_chrY_G0000251;Parent=HG002_chrY_T0000813;transcript_name=HG002_chrY_T0000813;gene_name=FAM197Y8;ID=intron:HG002_chrY_T0000813:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9425799	9425957	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000813;gene_id=HG002_chrY_G0000251;Parent=HG002_chrY_T0000813;transcript_name=HG002_chrY_T0000813;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000813:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9425958	9427465	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000813;gene_id=HG002_chrY_G0000251;Parent=HG002_chrY_T0000813;transcript_name=HG002_chrY_T0000813;gene_name=FAM197Y8;ID=intron:HG002_chrY_T0000813:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9427466	9427611	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000813;gene_id=HG002_chrY_G0000251;Parent=HG002_chrY_T0000813;transcript_name=HG002_chrY_T0000813;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000813:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9427612	9427697	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000813;gene_id=HG002_chrY_G0000251;Parent=HG002_chrY_T0000813;transcript_name=HG002_chrY_T0000813;gene_name=FAM197Y8;ID=intron:HG002_chrY_T0000813:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9427698	9427799	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000813;gene_id=HG002_chrY_G0000251;Parent=HG002_chrY_T0000813;transcript_name=HG002_chrY_T0000813;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000813:3;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9427463	9429429	.	-	.	source_gene_common_name=FAM197Y8;source_gene=ENSG00000225560.7;gene_id=HG002_chrY_G0000252;gene_biotype=transcribed_processed_pseudogene;gene_name=FAM197Y8;gene_sources=liftoff;ID=HG002_chrY_G0000252;Name=FAM197Y8
HG002_chrY	CAT	transcript	9427463	9429429	1000	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000814;gene_id=HG002_chrY_G0000252;Parent=HG002_chrY_G0000252;transcript_name=HG002_chrY_T0000814;gene_name=FAM197Y8;ID=HG002_chrY_T0000814;Name=FAM197Y8
HG002_chrY	CAT	exon	9427463	9427611	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000814;gene_id=HG002_chrY_G0000252;Parent=HG002_chrY_T0000814;transcript_name=HG002_chrY_T0000814;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000814:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9427612	9427697	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000814;gene_id=HG002_chrY_G0000252;Parent=HG002_chrY_T0000814;transcript_name=HG002_chrY_T0000814;gene_name=FAM197Y8;ID=intron:HG002_chrY_T0000814:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9427698	9427807	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000814;gene_id=HG002_chrY_G0000252;Parent=HG002_chrY_T0000814;transcript_name=HG002_chrY_T0000814;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000814:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9427808	9429128	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000814;gene_id=HG002_chrY_G0000252;Parent=HG002_chrY_T0000814;transcript_name=HG002_chrY_T0000814;gene_name=FAM197Y8;ID=intron:HG002_chrY_T0000814:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9429129	9429429	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG002_chrY_T0000814;gene_id=HG002_chrY_G0000252;Parent=HG002_chrY_T0000814;transcript_name=HG002_chrY_T0000814;gene_name=FAM197Y8;ID=exon:HG002_chrY_T0000814:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9430452	9433220	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1_6;gene_id=HG002_chrY_G0000253;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=HG002_chrY_G0000253;Name=ENSG00000293749
HG002_chrY	CAT	transcript	9430452	9433220	1000	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000815;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_G0000253;transcript_name=HG002_chrY_T0000815;gene_name=ENSG00000293749;ID=HG002_chrY_T0000815;Name=ENSG00000293749
HG002_chrY	CAT	exon	9430452	9430544	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000815;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000815;transcript_name=HG002_chrY_T0000815;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000815:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9430545	9430805	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000815;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000815;transcript_name=HG002_chrY_T0000815;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000815:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9430806	9430943	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000815;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000815;transcript_name=HG002_chrY_T0000815;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000815:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9430944	9431550	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000815;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000815;transcript_name=HG002_chrY_T0000815;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000815:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9431551	9431628	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000815;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000815;transcript_name=HG002_chrY_T0000815;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000815:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9431629	9431756	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000815;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000815;transcript_name=HG002_chrY_T0000815;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000815:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9431757	9431868	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000815;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000815;transcript_name=HG002_chrY_T0000815;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000815:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9431869	9431969	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000815;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000815;transcript_name=HG002_chrY_T0000815;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000815:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9431970	9432115	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000815;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000815;transcript_name=HG002_chrY_T0000815;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000815:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9432116	9432221	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000815;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000815;transcript_name=HG002_chrY_T0000815;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000815:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9432222	9432303	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000815;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000815;transcript_name=HG002_chrY_T0000815;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000815:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9432304	9432997	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000815;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000815;transcript_name=HG002_chrY_T0000815;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000815:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9432998	9433220	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000815;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000815;transcript_name=HG002_chrY_T0000815;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000815:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9430464	9433208	1000	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000817;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_G0000253;transcript_name=HG002_chrY_T0000817;gene_name=ENSG00000293749;ID=HG002_chrY_T0000817;Name=ENSG00000293749
HG002_chrY	CAT	exon	9430464	9430544	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000817;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000817;transcript_name=HG002_chrY_T0000817;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000817:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9430545	9430805	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000817;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000817;transcript_name=HG002_chrY_T0000817;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000817:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9430806	9430943	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000817;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000817;transcript_name=HG002_chrY_T0000817;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000817:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9430944	9431550	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000817;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000817;transcript_name=HG002_chrY_T0000817;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000817:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9431551	9431628	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000817;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000817;transcript_name=HG002_chrY_T0000817;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000817:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9431629	9431756	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000817;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000817;transcript_name=HG002_chrY_T0000817;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000817:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9431757	9431868	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000817;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000817;transcript_name=HG002_chrY_T0000817;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000817:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9431869	9431976	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000817;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000817;transcript_name=HG002_chrY_T0000817;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000817:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9431977	9432115	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000817;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000817;transcript_name=HG002_chrY_T0000817;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000817:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9432116	9432221	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000817;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000817;transcript_name=HG002_chrY_T0000817;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000817:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9432222	9432303	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000817;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000817;transcript_name=HG002_chrY_T0000817;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000817:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9432304	9432997	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000817;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000817;transcript_name=HG002_chrY_T0000817;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000817:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9432998	9433208	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000817;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000817;transcript_name=HG002_chrY_T0000817;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000817:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9430473	9433215	1000	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000818;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_G0000253;transcript_name=HG002_chrY_T0000818;gene_name=ENSG00000293749;ID=HG002_chrY_T0000818;Name=ENSG00000293749
HG002_chrY	CAT	exon	9430473	9430544	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000818;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000818;transcript_name=HG002_chrY_T0000818;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000818:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9430545	9430805	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000818;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000818;transcript_name=HG002_chrY_T0000818;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000818:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9430806	9430943	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000818;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000818;transcript_name=HG002_chrY_T0000818;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000818:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9430944	9431550	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000818;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000818;transcript_name=HG002_chrY_T0000818;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000818:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9431551	9431628	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000818;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000818;transcript_name=HG002_chrY_T0000818;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000818:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9431629	9431756	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000818;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000818;transcript_name=HG002_chrY_T0000818;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000818:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9431757	9431868	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000818;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000818;transcript_name=HG002_chrY_T0000818;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000818:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9431869	9431969	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000818;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000818;transcript_name=HG002_chrY_T0000818;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000818:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9431970	9432115	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000818;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000818;transcript_name=HG002_chrY_T0000818;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000818:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9432116	9432210	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000818;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000818;transcript_name=HG002_chrY_T0000818;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000818:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9432211	9432303	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000818;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000818;transcript_name=HG002_chrY_T0000818;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000818:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9432304	9432997	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000818;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000818;transcript_name=HG002_chrY_T0000818;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000818:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9432998	9433215	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000818;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000818;transcript_name=HG002_chrY_T0000818;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000818:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9430675	9433213	1000	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000819;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_G0000253;transcript_name=HG002_chrY_T0000819;gene_name=ENSG00000293749;ID=HG002_chrY_T0000819;Name=ENSG00000293749
HG002_chrY	CAT	exon	9430675	9430943	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000819;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000819;transcript_name=HG002_chrY_T0000819;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000819:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9430944	9431550	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000819;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000819;transcript_name=HG002_chrY_T0000819;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000819:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9431551	9431628	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000819;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000819;transcript_name=HG002_chrY_T0000819;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000819:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9431629	9431756	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000819;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000819;transcript_name=HG002_chrY_T0000819;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000819:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9431757	9431868	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000819;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000819;transcript_name=HG002_chrY_T0000819;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000819:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9431869	9431969	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000819;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000819;transcript_name=HG002_chrY_T0000819;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000819:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9431970	9432115	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000819;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000819;transcript_name=HG002_chrY_T0000819;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000819:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9432116	9432221	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000819;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000819;transcript_name=HG002_chrY_T0000819;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000819:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9432222	9432303	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000819;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000819;transcript_name=HG002_chrY_T0000819;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000819:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9432304	9432997	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000819;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000819;transcript_name=HG002_chrY_T0000819;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000819:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9432998	9433213	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000819;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000819;transcript_name=HG002_chrY_T0000819;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000819:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9430771	9433208	1000	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000820;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_G0000253;transcript_name=HG002_chrY_T0000820;gene_name=ENSG00000293749;ID=HG002_chrY_T0000820;Name=ENSG00000293749
HG002_chrY	CAT	exon	9430771	9430943	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000820;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000820;transcript_name=HG002_chrY_T0000820;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000820:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9430944	9431550	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000820;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000820;transcript_name=HG002_chrY_T0000820;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000820:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9431551	9431628	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000820;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000820;transcript_name=HG002_chrY_T0000820;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000820:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9431629	9431756	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000820;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000820;transcript_name=HG002_chrY_T0000820;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000820:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9431757	9431868	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000820;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000820;transcript_name=HG002_chrY_T0000820;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000820:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9431869	9431976	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000820;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000820;transcript_name=HG002_chrY_T0000820;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000820:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9431977	9432115	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000820;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000820;transcript_name=HG002_chrY_T0000820;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000820:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9432116	9432221	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000820;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000820;transcript_name=HG002_chrY_T0000820;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000820:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9432222	9432303	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000820;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000820;transcript_name=HG002_chrY_T0000820;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000820:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9432304	9432997	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000820;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000820;transcript_name=HG002_chrY_T0000820;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000820:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9432998	9433208	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000820;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000820;transcript_name=HG002_chrY_T0000820;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000820:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9430897	9433219	1000	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000821;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_G0000253;transcript_name=HG002_chrY_T0000821;gene_name=ENSG00000293749;ID=HG002_chrY_T0000821;Name=ENSG00000293749
HG002_chrY	CAT	exon	9430897	9430999	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000821;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000821;transcript_name=HG002_chrY_T0000821;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000821:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9431000	9431568	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000821;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000821;transcript_name=HG002_chrY_T0000821;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000821:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9431569	9431628	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000821;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000821;transcript_name=HG002_chrY_T0000821;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000821:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9431629	9431756	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000821;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000821;transcript_name=HG002_chrY_T0000821;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000821:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9431757	9431868	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000821;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000821;transcript_name=HG002_chrY_T0000821;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000821:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9431869	9431969	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000821;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000821;transcript_name=HG002_chrY_T0000821;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000821:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9431970	9432115	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000821;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000821;transcript_name=HG002_chrY_T0000821;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000821:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9432116	9432221	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000821;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000821;transcript_name=HG002_chrY_T0000821;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000821:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9432222	9432303	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000821;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000821;transcript_name=HG002_chrY_T0000821;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000821:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9432304	9432997	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000821;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000821;transcript_name=HG002_chrY_T0000821;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000821:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9432998	9433219	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000821;gene_id=HG002_chrY_G0000253;Parent=HG002_chrY_T0000821;transcript_name=HG002_chrY_T0000821;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000821:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9430458	9433020	.	+	.	source_gene_common_name=TSPY6P;source_gene=ENSG00000270073.1_6;gene_id=HG002_chrY_G0000254;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY6P;gene_sources=liftoff;ID=HG002_chrY_G0000254;Name=TSPY6P
HG002_chrY	CAT	transcript	9430458	9433020	1000	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000816;gene_id=HG002_chrY_G0000254;Parent=HG002_chrY_G0000254;transcript_name=HG002_chrY_T0000816;gene_name=TSPY6P;ID=HG002_chrY_T0000816;Name=TSPY6P
HG002_chrY	CAT	exon	9430458	9430668	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000816;gene_id=HG002_chrY_G0000254;Parent=HG002_chrY_T0000816;transcript_name=HG002_chrY_T0000816;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000816:0;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9430669	9430676	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000816;gene_id=HG002_chrY_G0000254;Parent=HG002_chrY_T0000816;transcript_name=HG002_chrY_T0000816;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000816:0;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9430677	9430943	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000816;gene_id=HG002_chrY_G0000254;Parent=HG002_chrY_T0000816;transcript_name=HG002_chrY_T0000816;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000816:1;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9430944	9431550	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000816;gene_id=HG002_chrY_G0000254;Parent=HG002_chrY_T0000816;transcript_name=HG002_chrY_T0000816;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000816:1;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9431551	9431628	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000816;gene_id=HG002_chrY_G0000254;Parent=HG002_chrY_T0000816;transcript_name=HG002_chrY_T0000816;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000816:2;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9431629	9431756	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000816;gene_id=HG002_chrY_G0000254;Parent=HG002_chrY_T0000816;transcript_name=HG002_chrY_T0000816;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000816:2;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9431757	9431868	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000816;gene_id=HG002_chrY_G0000254;Parent=HG002_chrY_T0000816;transcript_name=HG002_chrY_T0000816;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000816:3;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9431869	9431969	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000816;gene_id=HG002_chrY_G0000254;Parent=HG002_chrY_T0000816;transcript_name=HG002_chrY_T0000816;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000816:3;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9431970	9432115	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000816;gene_id=HG002_chrY_G0000254;Parent=HG002_chrY_T0000816;transcript_name=HG002_chrY_T0000816;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000816:4;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9432116	9432221	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000816;gene_id=HG002_chrY_G0000254;Parent=HG002_chrY_T0000816;transcript_name=HG002_chrY_T0000816;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000816:4;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9432222	9432303	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000816;gene_id=HG002_chrY_G0000254;Parent=HG002_chrY_T0000816;transcript_name=HG002_chrY_T0000816;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000816:5;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9432304	9432997	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000816;gene_id=HG002_chrY_G0000254;Parent=HG002_chrY_T0000816;transcript_name=HG002_chrY_T0000816;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000816:5;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9432998	9433020	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000816;gene_id=HG002_chrY_G0000254;Parent=HG002_chrY_T0000816;transcript_name=HG002_chrY_T0000816;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000816:6;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9431598	9433215	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1;gene_id=HG002_chrY_G0000255;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=HG002_chrY_G0000255;Name=ENSG00000293749
HG002_chrY	CAT	transcript	9431598	9433206	1000	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000822;gene_id=HG002_chrY_G0000255;Parent=HG002_chrY_G0000255;transcript_name=HG002_chrY_T0000822;gene_name=ENSG00000293749;ID=HG002_chrY_T0000822;Name=ENSG00000293749
HG002_chrY	CAT	exon	9431598	9431628	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000822;gene_id=HG002_chrY_G0000255;Parent=HG002_chrY_T0000822;transcript_name=HG002_chrY_T0000822;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000822:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9431629	9431756	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000822;gene_id=HG002_chrY_G0000255;Parent=HG002_chrY_T0000822;transcript_name=HG002_chrY_T0000822;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000822:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9431757	9432115	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000822;gene_id=HG002_chrY_G0000255;Parent=HG002_chrY_T0000822;transcript_name=HG002_chrY_T0000822;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000822:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9432116	9432221	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000822;gene_id=HG002_chrY_G0000255;Parent=HG002_chrY_T0000822;transcript_name=HG002_chrY_T0000822;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000822:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9432222	9432303	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000822;gene_id=HG002_chrY_G0000255;Parent=HG002_chrY_T0000822;transcript_name=HG002_chrY_T0000822;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000822:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9432304	9432997	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000822;gene_id=HG002_chrY_G0000255;Parent=HG002_chrY_T0000822;transcript_name=HG002_chrY_T0000822;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000822:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9432998	9433206	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000822;gene_id=HG002_chrY_G0000255;Parent=HG002_chrY_T0000822;transcript_name=HG002_chrY_T0000822;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000822:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9432143	9433215	1000	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000823;gene_id=HG002_chrY_G0000255;Parent=HG002_chrY_G0000255;transcript_name=HG002_chrY_T0000823;gene_name=ENSG00000293749;ID=HG002_chrY_T0000823;Name=ENSG00000293749
HG002_chrY	CAT	exon	9432143	9432303	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000823;gene_id=HG002_chrY_G0000255;Parent=HG002_chrY_T0000823;transcript_name=HG002_chrY_T0000823;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000823:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9432304	9432997	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000823;gene_id=HG002_chrY_G0000255;Parent=HG002_chrY_T0000823;transcript_name=HG002_chrY_T0000823;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000823:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9432998	9433215	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000823;gene_id=HG002_chrY_G0000255;Parent=HG002_chrY_T0000823;transcript_name=HG002_chrY_T0000823;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000823:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9440437	9448130	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1_8;gene_id=HG002_chrY_G0000256;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG002_chrY_G0000256;Name=FAM197Y9
HG002_chrY	CAT	transcript	9440437	9448130	1000	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000824;gene_id=HG002_chrY_G0000256;Parent=HG002_chrY_G0000256;transcript_name=HG002_chrY_T0000824;gene_name=FAM197Y9;ID=HG002_chrY_T0000824;Name=FAM197Y9
HG002_chrY	CAT	exon	9440437	9442564	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000824;gene_id=HG002_chrY_G0000256;Parent=HG002_chrY_T0000824;transcript_name=HG002_chrY_T0000824;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000824:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9442565	9446115	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000824;gene_id=HG002_chrY_G0000256;Parent=HG002_chrY_T0000824;transcript_name=HG002_chrY_T0000824;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000824:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9446116	9446201	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000824;gene_id=HG002_chrY_G0000256;Parent=HG002_chrY_T0000824;transcript_name=HG002_chrY_T0000824;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000824:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9446202	9448010	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000824;gene_id=HG002_chrY_G0000256;Parent=HG002_chrY_T0000824;transcript_name=HG002_chrY_T0000824;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000824:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9448011	9448130	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000824;gene_id=HG002_chrY_G0000256;Parent=HG002_chrY_T0000824;transcript_name=HG002_chrY_T0000824;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000824:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9442505	9448112	1000	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000825;gene_id=HG002_chrY_G0000256;Parent=HG002_chrY_G0000256;transcript_name=HG002_chrY_T0000825;gene_name=FAM197Y9;ID=HG002_chrY_T0000825;Name=FAM197Y9
HG002_chrY	CAT	exon	9442505	9442564	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000825;gene_id=HG002_chrY_G0000256;Parent=HG002_chrY_T0000825;transcript_name=HG002_chrY_T0000825;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000825:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9442565	9446115	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000825;gene_id=HG002_chrY_G0000256;Parent=HG002_chrY_T0000825;transcript_name=HG002_chrY_T0000825;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000825:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9446116	9446274	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000825;gene_id=HG002_chrY_G0000256;Parent=HG002_chrY_T0000825;transcript_name=HG002_chrY_T0000825;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000825:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9446275	9447778	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000825;gene_id=HG002_chrY_G0000256;Parent=HG002_chrY_T0000825;transcript_name=HG002_chrY_T0000825;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000825:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9447779	9447924	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000825;gene_id=HG002_chrY_G0000256;Parent=HG002_chrY_T0000825;transcript_name=HG002_chrY_T0000825;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000825:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9447925	9448010	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000825;gene_id=HG002_chrY_G0000256;Parent=HG002_chrY_T0000825;transcript_name=HG002_chrY_T0000825;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000825:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9448011	9448112	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000825;gene_id=HG002_chrY_G0000256;Parent=HG002_chrY_T0000825;transcript_name=HG002_chrY_T0000825;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000825:3;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9447779	9449773	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9_8;gene_id=HG002_chrY_G0000257;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG002_chrY_G0000257;Name=FAM197Y9
HG002_chrY	CAT	transcript	9447779	9449773	1000	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000826;gene_id=HG002_chrY_G0000257;Parent=HG002_chrY_G0000257;transcript_name=HG002_chrY_T0000826;gene_name=FAM197Y9;ID=HG002_chrY_T0000826;Name=FAM197Y9
HG002_chrY	CAT	exon	9447779	9447924	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000826;gene_id=HG002_chrY_G0000257;Parent=HG002_chrY_T0000826;transcript_name=HG002_chrY_T0000826;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000826:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9447925	9448036	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000826;gene_id=HG002_chrY_G0000257;Parent=HG002_chrY_T0000826;transcript_name=HG002_chrY_T0000826;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000826:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9448037	9448120	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000826;gene_id=HG002_chrY_G0000257;Parent=HG002_chrY_T0000826;transcript_name=HG002_chrY_T0000826;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000826:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9448121	9449463	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000826;gene_id=HG002_chrY_G0000257;Parent=HG002_chrY_T0000826;transcript_name=HG002_chrY_T0000826;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000826:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9449464	9449773	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000826;gene_id=HG002_chrY_G0000257;Parent=HG002_chrY_T0000826;transcript_name=HG002_chrY_T0000826;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000826:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9450727	9453541	.	+	.	source_gene_common_name=TSPY9;source_gene=ENSG00000238074.6;gene_id=HG002_chrY_G0000258;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff;ID=HG002_chrY_G0000258;Name=TSPY9
HG002_chrY	CAT	transcript	9450727	9453541	100	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000827;gene_id=HG002_chrY_G0000258;Parent=HG002_chrY_G0000258;transcript_name=HG002_chrY_T0000827;gene_name=TSPY9;ID=HG002_chrY_T0000827;Name=TSPY9
HG002_chrY	CAT	exon	9450727	9451276	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000827;gene_id=HG002_chrY_G0000258;Parent=HG002_chrY_T0000827;transcript_name=HG002_chrY_T0000827;gene_name=TSPY9;ID=exon:HG002_chrY_T0000827:0;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9450773	9451276	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000827;gene_id=HG002_chrY_G0000258;Parent=HG002_chrY_T0000827;transcript_name=HG002_chrY_T0000827;gene_name=TSPY9;ID=CDS:HG002_chrY_T0000827:0;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9450773	9450775	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000827;gene_id=HG002_chrY_G0000258;Parent=HG002_chrY_T0000827;transcript_name=HG002_chrY_T0000827;gene_name=TSPY9;ID=start_codon:HG002_chrY_T0000827;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9451277	9451883	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000827;gene_id=HG002_chrY_G0000258;Parent=HG002_chrY_T0000827;transcript_name=HG002_chrY_T0000827;gene_name=TSPY9;ID=intron:HG002_chrY_T0000827:0;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9451884	9451961	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000827;gene_id=HG002_chrY_G0000258;Parent=HG002_chrY_T0000827;transcript_name=HG002_chrY_T0000827;gene_name=TSPY9;ID=exon:HG002_chrY_T0000827:1;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9451884	9451961	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000827;gene_id=HG002_chrY_G0000258;Parent=HG002_chrY_T0000827;transcript_name=HG002_chrY_T0000827;gene_name=TSPY9;ID=CDS:HG002_chrY_T0000827:1;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9451962	9452089	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000827;gene_id=HG002_chrY_G0000258;Parent=HG002_chrY_T0000827;transcript_name=HG002_chrY_T0000827;gene_name=TSPY9;ID=intron:HG002_chrY_T0000827:1;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9452090	9452201	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000827;gene_id=HG002_chrY_G0000258;Parent=HG002_chrY_T0000827;transcript_name=HG002_chrY_T0000827;gene_name=TSPY9;ID=exon:HG002_chrY_T0000827:2;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9452090	9452201	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000827;gene_id=HG002_chrY_G0000258;Parent=HG002_chrY_T0000827;transcript_name=HG002_chrY_T0000827;gene_name=TSPY9;ID=CDS:HG002_chrY_T0000827:2;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9452202	9452302	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000827;gene_id=HG002_chrY_G0000258;Parent=HG002_chrY_T0000827;transcript_name=HG002_chrY_T0000827;gene_name=TSPY9;ID=intron:HG002_chrY_T0000827:2;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9452303	9452448	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000827;gene_id=HG002_chrY_G0000258;Parent=HG002_chrY_T0000827;transcript_name=HG002_chrY_T0000827;gene_name=TSPY9;ID=exon:HG002_chrY_T0000827:3;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9452303	9452448	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000827;gene_id=HG002_chrY_G0000258;Parent=HG002_chrY_T0000827;transcript_name=HG002_chrY_T0000827;gene_name=TSPY9;ID=CDS:HG002_chrY_T0000827:3;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9452449	9452554	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000827;gene_id=HG002_chrY_G0000258;Parent=HG002_chrY_T0000827;transcript_name=HG002_chrY_T0000827;gene_name=TSPY9;ID=intron:HG002_chrY_T0000827:3;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9452555	9452636	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000827;gene_id=HG002_chrY_G0000258;Parent=HG002_chrY_T0000827;transcript_name=HG002_chrY_T0000827;gene_name=TSPY9;ID=exon:HG002_chrY_T0000827:4;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9452555	9452636	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000827;gene_id=HG002_chrY_G0000258;Parent=HG002_chrY_T0000827;transcript_name=HG002_chrY_T0000827;gene_name=TSPY9;ID=CDS:HG002_chrY_T0000827:4;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9452637	9453330	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000827;gene_id=HG002_chrY_G0000258;Parent=HG002_chrY_T0000827;transcript_name=HG002_chrY_T0000827;gene_name=TSPY9;ID=intron:HG002_chrY_T0000827:4;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9453331	9453541	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000827;gene_id=HG002_chrY_G0000258;Parent=HG002_chrY_T0000827;transcript_name=HG002_chrY_T0000827;gene_name=TSPY9;ID=exon:HG002_chrY_T0000827:5;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9453331	9453353	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000827;gene_id=HG002_chrY_G0000258;Parent=HG002_chrY_T0000827;transcript_name=HG002_chrY_T0000827;gene_name=TSPY9;ID=CDS:HG002_chrY_T0000827:5;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9453351	9453353	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000827;gene_id=HG002_chrY_G0000258;Parent=HG002_chrY_T0000827;transcript_name=HG002_chrY_T0000827;gene_name=TSPY9;ID=stop_codon:HG002_chrY_T0000827;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9462665	9468412	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=HG002_chrY_G0000259;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000259;Name=FAM197Y5
HG002_chrY	CAT	transcript	9462665	9468412	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000828;gene_id=HG002_chrY_G0000259;Parent=HG002_chrY_G0000259;transcript_name=HG002_chrY_T0000828;gene_name=FAM197Y5;ID=HG002_chrY_T0000828;Name=FAM197Y5
HG002_chrY	CAT	exon	9462665	9462854	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000828;gene_id=HG002_chrY_G0000259;Parent=HG002_chrY_T0000828;transcript_name=HG002_chrY_T0000828;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000828:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9462855	9466403	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000828;gene_id=HG002_chrY_G0000259;Parent=HG002_chrY_T0000828;transcript_name=HG002_chrY_T0000828;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000828:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9466404	9466489	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000828;gene_id=HG002_chrY_G0000259;Parent=HG002_chrY_T0000828;transcript_name=HG002_chrY_T0000828;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000828:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9466490	9468298	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000828;gene_id=HG002_chrY_G0000259;Parent=HG002_chrY_T0000828;transcript_name=HG002_chrY_T0000828;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000828:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9468299	9468412	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000828;gene_id=HG002_chrY_G0000259;Parent=HG002_chrY_T0000828;transcript_name=HG002_chrY_T0000828;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000828:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9462795	9468400	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000829;gene_id=HG002_chrY_G0000259;Parent=HG002_chrY_G0000259;transcript_name=HG002_chrY_T0000829;gene_name=FAM197Y5;ID=HG002_chrY_T0000829;Name=FAM197Y5
HG002_chrY	CAT	exon	9462795	9462854	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000829;gene_id=HG002_chrY_G0000259;Parent=HG002_chrY_T0000829;transcript_name=HG002_chrY_T0000829;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000829:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9462855	9466403	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000829;gene_id=HG002_chrY_G0000259;Parent=HG002_chrY_T0000829;transcript_name=HG002_chrY_T0000829;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000829:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9466404	9466562	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000829;gene_id=HG002_chrY_G0000259;Parent=HG002_chrY_T0000829;transcript_name=HG002_chrY_T0000829;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000829:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9466563	9468066	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000829;gene_id=HG002_chrY_G0000259;Parent=HG002_chrY_T0000829;transcript_name=HG002_chrY_T0000829;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000829:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9468067	9468212	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000829;gene_id=HG002_chrY_G0000259;Parent=HG002_chrY_T0000829;transcript_name=HG002_chrY_T0000829;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000829:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9468213	9468298	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000829;gene_id=HG002_chrY_G0000259;Parent=HG002_chrY_T0000829;transcript_name=HG002_chrY_T0000829;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000829:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9468299	9468400	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000829;gene_id=HG002_chrY_G0000259;Parent=HG002_chrY_T0000829;transcript_name=HG002_chrY_T0000829;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000829:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9468067	9470059	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_2;gene_id=HG002_chrY_G0000260;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000260;Name=FAM197Y5
HG002_chrY	CAT	transcript	9468067	9470059	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000830;gene_id=HG002_chrY_G0000260;Parent=HG002_chrY_G0000260;transcript_name=HG002_chrY_T0000830;gene_name=FAM197Y5;ID=HG002_chrY_T0000830;Name=FAM197Y5
HG002_chrY	CAT	exon	9468067	9468212	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000830;gene_id=HG002_chrY_G0000260;Parent=HG002_chrY_T0000830;transcript_name=HG002_chrY_T0000830;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000830:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9468213	9469748	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000830;gene_id=HG002_chrY_G0000260;Parent=HG002_chrY_T0000830;transcript_name=HG002_chrY_T0000830;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000830:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9469749	9470059	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000830;gene_id=HG002_chrY_G0000260;Parent=HG002_chrY_T0000830;transcript_name=HG002_chrY_T0000830;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000830:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9471013	9473809	.	+	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;alternative_source_transcripts=ENST00000428845.6;gene_id=HG002_chrY_G0000261;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=HG002_chrY_G0000261;Name=TSPY3
HG002_chrY	CAT	transcript	9471013	9473809	100	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG002_chrY_T0000831;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_G0000261;transcript_name=HG002_chrY_T0000831;gene_name=TSPY3;ID=HG002_chrY_T0000831;Name=TSPY3
HG002_chrY	CAT	exon	9471013	9471544	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG002_chrY_T0000831;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000831;transcript_name=HG002_chrY_T0000831;gene_name=TSPY3;ID=exon:HG002_chrY_T0000831:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9471059	9471544	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG002_chrY_T0000831;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000831;transcript_name=HG002_chrY_T0000831;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000831:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9471059	9471061	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG002_chrY_T0000831;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000831;transcript_name=HG002_chrY_T0000831;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000831;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9471545	9472151	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG002_chrY_T0000831;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000831;transcript_name=HG002_chrY_T0000831;gene_name=TSPY3;ID=intron:HG002_chrY_T0000831:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9472152	9472229	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG002_chrY_T0000831;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000831;transcript_name=HG002_chrY_T0000831;gene_name=TSPY3;ID=exon:HG002_chrY_T0000831:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9472152	9472229	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG002_chrY_T0000831;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000831;transcript_name=HG002_chrY_T0000831;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000831:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9472230	9472357	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG002_chrY_T0000831;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000831;transcript_name=HG002_chrY_T0000831;gene_name=TSPY3;ID=intron:HG002_chrY_T0000831:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9472358	9472469	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG002_chrY_T0000831;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000831;transcript_name=HG002_chrY_T0000831;gene_name=TSPY3;ID=exon:HG002_chrY_T0000831:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9472358	9472469	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG002_chrY_T0000831;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000831;transcript_name=HG002_chrY_T0000831;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000831:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9472470	9472570	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG002_chrY_T0000831;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000831;transcript_name=HG002_chrY_T0000831;gene_name=TSPY3;ID=intron:HG002_chrY_T0000831:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9472571	9472716	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG002_chrY_T0000831;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000831;transcript_name=HG002_chrY_T0000831;gene_name=TSPY3;ID=exon:HG002_chrY_T0000831:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9472571	9472716	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG002_chrY_T0000831;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000831;transcript_name=HG002_chrY_T0000831;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000831:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9472717	9472822	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG002_chrY_T0000831;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000831;transcript_name=HG002_chrY_T0000831;gene_name=TSPY3;ID=intron:HG002_chrY_T0000831:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9472823	9472904	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG002_chrY_T0000831;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000831;transcript_name=HG002_chrY_T0000831;gene_name=TSPY3;ID=exon:HG002_chrY_T0000831:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9472823	9472904	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG002_chrY_T0000831;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000831;transcript_name=HG002_chrY_T0000831;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000831:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9472905	9473598	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG002_chrY_T0000831;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000831;transcript_name=HG002_chrY_T0000831;gene_name=TSPY3;ID=intron:HG002_chrY_T0000831:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9473599	9473809	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG002_chrY_T0000831;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000831;transcript_name=HG002_chrY_T0000831;gene_name=TSPY3;ID=exon:HG002_chrY_T0000831:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9473599	9473621	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG002_chrY_T0000831;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000831;transcript_name=HG002_chrY_T0000831;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000831:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9473619	9473621	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG002_chrY_T0000831;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000831;transcript_name=HG002_chrY_T0000831;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000831;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9471059	9473808	100	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG002_chrY_T0000832;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_G0000261;transcript_name=HG002_chrY_T0000832;gene_name=TSPY3;ID=HG002_chrY_T0000832;Name=TSPY3
HG002_chrY	CAT	exon	9471059	9471544	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG002_chrY_T0000832;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000832;transcript_name=HG002_chrY_T0000832;gene_name=TSPY3;ID=exon:HG002_chrY_T0000832:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9471059	9471544	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG002_chrY_T0000832;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000832;transcript_name=HG002_chrY_T0000832;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000832:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9471059	9471061	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG002_chrY_T0000832;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000832;transcript_name=HG002_chrY_T0000832;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000832;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9471545	9472151	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG002_chrY_T0000832;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000832;transcript_name=HG002_chrY_T0000832;gene_name=TSPY3;ID=intron:HG002_chrY_T0000832:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9472152	9472229	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG002_chrY_T0000832;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000832;transcript_name=HG002_chrY_T0000832;gene_name=TSPY3;ID=exon:HG002_chrY_T0000832:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9472152	9472229	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG002_chrY_T0000832;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000832;transcript_name=HG002_chrY_T0000832;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000832:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9472230	9472357	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG002_chrY_T0000832;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000832;transcript_name=HG002_chrY_T0000832;gene_name=TSPY3;ID=intron:HG002_chrY_T0000832:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9472358	9472469	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG002_chrY_T0000832;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000832;transcript_name=HG002_chrY_T0000832;gene_name=TSPY3;ID=exon:HG002_chrY_T0000832:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9472358	9472469	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG002_chrY_T0000832;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000832;transcript_name=HG002_chrY_T0000832;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000832:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9472470	9472570	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG002_chrY_T0000832;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000832;transcript_name=HG002_chrY_T0000832;gene_name=TSPY3;ID=intron:HG002_chrY_T0000832:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9472571	9472716	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG002_chrY_T0000832;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000832;transcript_name=HG002_chrY_T0000832;gene_name=TSPY3;ID=exon:HG002_chrY_T0000832:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9472571	9472716	.	+	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG002_chrY_T0000832;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000832;transcript_name=HG002_chrY_T0000832;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000832:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9472717	9472811	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG002_chrY_T0000832;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000832;transcript_name=HG002_chrY_T0000832;gene_name=TSPY3;ID=intron:HG002_chrY_T0000832:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9472812	9472904	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG002_chrY_T0000832;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000832;transcript_name=HG002_chrY_T0000832;gene_name=TSPY3;ID=exon:HG002_chrY_T0000832:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9472812	9472874	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG002_chrY_T0000832;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000832;transcript_name=HG002_chrY_T0000832;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000832:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9472872	9472874	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG002_chrY_T0000832;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000832;transcript_name=HG002_chrY_T0000832;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000832;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9472905	9473598	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG002_chrY_T0000832;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000832;transcript_name=HG002_chrY_T0000832;gene_name=TSPY3;ID=intron:HG002_chrY_T0000832:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9473599	9473808	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG002_chrY_T0000832;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000832;transcript_name=HG002_chrY_T0000832;gene_name=TSPY3;ID=exon:HG002_chrY_T0000832:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9471059	9473621	100	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000833;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_G0000261;transcript_name=HG002_chrY_T0000833;gene_name=TSPY3;ID=HG002_chrY_T0000833;Name=TSPY3
HG002_chrY	CAT	exon	9471059	9471145	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000833;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000833;transcript_name=HG002_chrY_T0000833;gene_name=TSPY3;ID=exon:HG002_chrY_T0000833:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9471059	9471145	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000833;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000833;transcript_name=HG002_chrY_T0000833;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000833:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9471059	9471061	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000833;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000833;transcript_name=HG002_chrY_T0000833;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000833;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9471146	9471406	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000833;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000833;transcript_name=HG002_chrY_T0000833;gene_name=TSPY3;ID=intron:HG002_chrY_T0000833:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9471407	9471544	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000833;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000833;transcript_name=HG002_chrY_T0000833;gene_name=TSPY3;ID=exon:HG002_chrY_T0000833:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9471407	9471544	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000833;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000833;transcript_name=HG002_chrY_T0000833;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000833:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9471545	9472151	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000833;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000833;transcript_name=HG002_chrY_T0000833;gene_name=TSPY3;ID=intron:HG002_chrY_T0000833:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9472152	9472229	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000833;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000833;transcript_name=HG002_chrY_T0000833;gene_name=TSPY3;ID=exon:HG002_chrY_T0000833:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9472152	9472229	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000833;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000833;transcript_name=HG002_chrY_T0000833;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000833:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9472230	9472357	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000833;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000833;transcript_name=HG002_chrY_T0000833;gene_name=TSPY3;ID=intron:HG002_chrY_T0000833:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9472358	9472469	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000833;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000833;transcript_name=HG002_chrY_T0000833;gene_name=TSPY3;ID=exon:HG002_chrY_T0000833:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9472358	9472469	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000833;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000833;transcript_name=HG002_chrY_T0000833;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000833:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9472470	9472570	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000833;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000833;transcript_name=HG002_chrY_T0000833;gene_name=TSPY3;ID=intron:HG002_chrY_T0000833:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9472571	9472716	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000833;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000833;transcript_name=HG002_chrY_T0000833;gene_name=TSPY3;ID=exon:HG002_chrY_T0000833:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9472571	9472716	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000833;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000833;transcript_name=HG002_chrY_T0000833;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000833:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9472717	9472822	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000833;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000833;transcript_name=HG002_chrY_T0000833;gene_name=TSPY3;ID=intron:HG002_chrY_T0000833:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9472823	9472904	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000833;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000833;transcript_name=HG002_chrY_T0000833;gene_name=TSPY3;ID=exon:HG002_chrY_T0000833:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9472823	9472904	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000833;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000833;transcript_name=HG002_chrY_T0000833;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000833:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9472905	9473598	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000833;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000833;transcript_name=HG002_chrY_T0000833;gene_name=TSPY3;ID=intron:HG002_chrY_T0000833:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9473599	9473621	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000833;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000833;transcript_name=HG002_chrY_T0000833;gene_name=TSPY3;ID=exon:HG002_chrY_T0000833:6;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9473599	9473621	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000833;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000833;transcript_name=HG002_chrY_T0000833;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000833:6;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9473619	9473621	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000833;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000833;transcript_name=HG002_chrY_T0000833;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000833;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9471059	9473815	1000	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000489397.1;transcript_id=HG002_chrY_T0000834;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_G0000261;transcript_name=HG002_chrY_T0000834;gene_name=TSPY3;ID=HG002_chrY_T0000834;Name=TSPY3
HG002_chrY	CAT	exon	9471059	9471544	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000489397.1;transcript_id=HG002_chrY_T0000834;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000834;transcript_name=HG002_chrY_T0000834;gene_name=TSPY3;ID=exon:HG002_chrY_T0000834:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9471545	9472151	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000489397.1;transcript_id=HG002_chrY_T0000834;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000834;transcript_name=HG002_chrY_T0000834;gene_name=TSPY3;ID=intron:HG002_chrY_T0000834:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9472152	9472229	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000489397.1;transcript_id=HG002_chrY_T0000834;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000834;transcript_name=HG002_chrY_T0000834;gene_name=TSPY3;ID=exon:HG002_chrY_T0000834:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9472230	9472357	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000489397.1;transcript_id=HG002_chrY_T0000834;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000834;transcript_name=HG002_chrY_T0000834;gene_name=TSPY3;ID=intron:HG002_chrY_T0000834:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9472358	9472904	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000489397.1;transcript_id=HG002_chrY_T0000834;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000834;transcript_name=HG002_chrY_T0000834;gene_name=TSPY3;ID=exon:HG002_chrY_T0000834:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9472905	9473031	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000489397.1;transcript_id=HG002_chrY_T0000834;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000834;transcript_name=HG002_chrY_T0000834;gene_name=TSPY3;ID=intron:HG002_chrY_T0000834:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9473032	9473815	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000489397.1;transcript_id=HG002_chrY_T0000834;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000834;transcript_name=HG002_chrY_T0000834;gene_name=TSPY3;ID=exon:HG002_chrY_T0000834:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9472419	9473800	1000	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000835;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_G0000261;transcript_name=HG002_chrY_T0000835;gene_name=TSPY3;ID=HG002_chrY_T0000835;Name=TSPY3
HG002_chrY	CAT	exon	9472419	9472716	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000835;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000835;transcript_name=HG002_chrY_T0000835;gene_name=TSPY3;ID=exon:HG002_chrY_T0000835:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9472717	9472811	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000835;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000835;transcript_name=HG002_chrY_T0000835;gene_name=TSPY3;ID=intron:HG002_chrY_T0000835:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9472812	9472904	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000835;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000835;transcript_name=HG002_chrY_T0000835;gene_name=TSPY3;ID=exon:HG002_chrY_T0000835:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9472905	9473598	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000835;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000835;transcript_name=HG002_chrY_T0000835;gene_name=TSPY3;ID=intron:HG002_chrY_T0000835:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9473599	9473800	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000835;gene_id=HG002_chrY_G0000261;Parent=HG002_chrY_T0000835;transcript_name=HG002_chrY_T0000835;gene_name=TSPY3;ID=exon:HG002_chrY_T0000835:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9482949	9488696	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=HG002_chrY_G0000262;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000262;Name=FAM197Y5
HG002_chrY	CAT	transcript	9482949	9488696	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000836;gene_id=HG002_chrY_G0000262;Parent=HG002_chrY_G0000262;transcript_name=HG002_chrY_T0000836;gene_name=FAM197Y5;ID=HG002_chrY_T0000836;Name=FAM197Y5
HG002_chrY	CAT	exon	9482949	9483138	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000836;gene_id=HG002_chrY_G0000262;Parent=HG002_chrY_T0000836;transcript_name=HG002_chrY_T0000836;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000836:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9483139	9486693	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000836;gene_id=HG002_chrY_G0000262;Parent=HG002_chrY_T0000836;transcript_name=HG002_chrY_T0000836;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000836:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9486694	9486779	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000836;gene_id=HG002_chrY_G0000262;Parent=HG002_chrY_T0000836;transcript_name=HG002_chrY_T0000836;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000836:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9486780	9488582	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000836;gene_id=HG002_chrY_G0000262;Parent=HG002_chrY_T0000836;transcript_name=HG002_chrY_T0000836;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000836:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9488583	9488696	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000836;gene_id=HG002_chrY_G0000262;Parent=HG002_chrY_T0000836;transcript_name=HG002_chrY_T0000836;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000836:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9483079	9488684	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000837;gene_id=HG002_chrY_G0000262;Parent=HG002_chrY_G0000262;transcript_name=HG002_chrY_T0000837;gene_name=FAM197Y5;ID=HG002_chrY_T0000837;Name=FAM197Y5
HG002_chrY	CAT	exon	9483079	9483138	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000837;gene_id=HG002_chrY_G0000262;Parent=HG002_chrY_T0000837;transcript_name=HG002_chrY_T0000837;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000837:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9483139	9486693	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000837;gene_id=HG002_chrY_G0000262;Parent=HG002_chrY_T0000837;transcript_name=HG002_chrY_T0000837;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000837:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9486694	9486852	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000837;gene_id=HG002_chrY_G0000262;Parent=HG002_chrY_T0000837;transcript_name=HG002_chrY_T0000837;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000837:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9486853	9488350	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000837;gene_id=HG002_chrY_G0000262;Parent=HG002_chrY_T0000837;transcript_name=HG002_chrY_T0000837;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000837:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9488351	9488496	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000837;gene_id=HG002_chrY_G0000262;Parent=HG002_chrY_T0000837;transcript_name=HG002_chrY_T0000837;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000837:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9488497	9488582	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000837;gene_id=HG002_chrY_G0000262;Parent=HG002_chrY_T0000837;transcript_name=HG002_chrY_T0000837;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000837:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9488583	9488684	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000837;gene_id=HG002_chrY_G0000262;Parent=HG002_chrY_T0000837;transcript_name=HG002_chrY_T0000837;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000837:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9488351	9490343	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_10;gene_id=HG002_chrY_G0000263;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000263;Name=FAM197Y5
HG002_chrY	CAT	transcript	9488351	9490343	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000838;gene_id=HG002_chrY_G0000263;Parent=HG002_chrY_G0000263;transcript_name=HG002_chrY_T0000838;gene_name=FAM197Y5;ID=HG002_chrY_T0000838;Name=FAM197Y5
HG002_chrY	CAT	exon	9488351	9488496	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000838;gene_id=HG002_chrY_G0000263;Parent=HG002_chrY_T0000838;transcript_name=HG002_chrY_T0000838;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000838:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9488497	9490032	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000838;gene_id=HG002_chrY_G0000263;Parent=HG002_chrY_T0000838;transcript_name=HG002_chrY_T0000838;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000838:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9490033	9490343	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000838;gene_id=HG002_chrY_G0000263;Parent=HG002_chrY_T0000838;transcript_name=HG002_chrY_T0000838;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000838:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9491297	9494111	.	+	.	source_gene_common_name=TSPY4;source_gene=ENSG00000233803.9;gene_id=HG002_chrY_G0000264;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG002_chrY_G0000264;Name=TSPY4
HG002_chrY	CAT	transcript	9491297	9494111	100	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000839;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_G0000264;transcript_name=HG002_chrY_T0000839;gene_name=TSPY4;ID=HG002_chrY_T0000839;Name=TSPY4
HG002_chrY	CAT	exon	9491297	9491846	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000839;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000839;transcript_name=HG002_chrY_T0000839;gene_name=TSPY4;ID=exon:HG002_chrY_T0000839:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9491343	9491846	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000839;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000839;transcript_name=HG002_chrY_T0000839;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000839:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9491343	9491345	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000839;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000839;transcript_name=HG002_chrY_T0000839;gene_name=TSPY4;ID=start_codon:HG002_chrY_T0000839;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9491847	9492453	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000839;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000839;transcript_name=HG002_chrY_T0000839;gene_name=TSPY4;ID=intron:HG002_chrY_T0000839:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9492454	9492531	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000839;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000839;transcript_name=HG002_chrY_T0000839;gene_name=TSPY4;ID=exon:HG002_chrY_T0000839:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9492454	9492531	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000839;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000839;transcript_name=HG002_chrY_T0000839;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000839:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9492532	9492659	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000839;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000839;transcript_name=HG002_chrY_T0000839;gene_name=TSPY4;ID=intron:HG002_chrY_T0000839:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9492660	9492771	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000839;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000839;transcript_name=HG002_chrY_T0000839;gene_name=TSPY4;ID=exon:HG002_chrY_T0000839:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9492660	9492771	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000839;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000839;transcript_name=HG002_chrY_T0000839;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000839:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9492772	9492872	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000839;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000839;transcript_name=HG002_chrY_T0000839;gene_name=TSPY4;ID=intron:HG002_chrY_T0000839:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9492873	9493018	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000839;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000839;transcript_name=HG002_chrY_T0000839;gene_name=TSPY4;ID=exon:HG002_chrY_T0000839:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9492873	9493018	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000839;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000839;transcript_name=HG002_chrY_T0000839;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000839:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9493019	9493124	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000839;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000839;transcript_name=HG002_chrY_T0000839;gene_name=TSPY4;ID=intron:HG002_chrY_T0000839:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9493125	9493206	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000839;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000839;transcript_name=HG002_chrY_T0000839;gene_name=TSPY4;ID=exon:HG002_chrY_T0000839:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9493125	9493206	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000839;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000839;transcript_name=HG002_chrY_T0000839;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000839:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9493207	9493900	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000839;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000839;transcript_name=HG002_chrY_T0000839;gene_name=TSPY4;ID=intron:HG002_chrY_T0000839:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9493901	9494111	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000839;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000839;transcript_name=HG002_chrY_T0000839;gene_name=TSPY4;ID=exon:HG002_chrY_T0000839:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9493901	9493923	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000839;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000839;transcript_name=HG002_chrY_T0000839;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000839:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9493921	9493923	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000839;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000839;transcript_name=HG002_chrY_T0000839;gene_name=TSPY4;ID=stop_codon:HG002_chrY_T0000839;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9491297	9493990	100	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000840;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_G0000264;transcript_name=HG002_chrY_T0000840;gene_name=TSPY4;ID=HG002_chrY_T0000840;Name=TSPY4
HG002_chrY	CAT	exon	9491297	9491429	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000840;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000840;transcript_name=HG002_chrY_T0000840;gene_name=TSPY4;ID=exon:HG002_chrY_T0000840:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9491343	9491429	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000840;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000840;transcript_name=HG002_chrY_T0000840;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000840:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9491343	9491345	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000840;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000840;transcript_name=HG002_chrY_T0000840;gene_name=TSPY4;ID=start_codon:HG002_chrY_T0000840;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9491430	9491708	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000840;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000840;transcript_name=HG002_chrY_T0000840;gene_name=TSPY4;ID=intron:HG002_chrY_T0000840:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9491709	9491846	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000840;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000840;transcript_name=HG002_chrY_T0000840;gene_name=TSPY4;ID=exon:HG002_chrY_T0000840:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9491709	9491846	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000840;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000840;transcript_name=HG002_chrY_T0000840;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000840:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9491847	9492453	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000840;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000840;transcript_name=HG002_chrY_T0000840;gene_name=TSPY4;ID=intron:HG002_chrY_T0000840:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9492454	9492531	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000840;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000840;transcript_name=HG002_chrY_T0000840;gene_name=TSPY4;ID=exon:HG002_chrY_T0000840:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9492454	9492531	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000840;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000840;transcript_name=HG002_chrY_T0000840;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000840:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9492532	9492659	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000840;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000840;transcript_name=HG002_chrY_T0000840;gene_name=TSPY4;ID=intron:HG002_chrY_T0000840:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9492660	9492771	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000840;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000840;transcript_name=HG002_chrY_T0000840;gene_name=TSPY4;ID=exon:HG002_chrY_T0000840:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9492660	9492771	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000840;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000840;transcript_name=HG002_chrY_T0000840;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000840:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9492772	9492872	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000840;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000840;transcript_name=HG002_chrY_T0000840;gene_name=TSPY4;ID=intron:HG002_chrY_T0000840:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9492873	9493018	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000840;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000840;transcript_name=HG002_chrY_T0000840;gene_name=TSPY4;ID=exon:HG002_chrY_T0000840:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9492873	9493018	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000840;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000840;transcript_name=HG002_chrY_T0000840;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000840:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9493019	9493124	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000840;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000840;transcript_name=HG002_chrY_T0000840;gene_name=TSPY4;ID=intron:HG002_chrY_T0000840:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9493125	9493206	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000840;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000840;transcript_name=HG002_chrY_T0000840;gene_name=TSPY4;ID=exon:HG002_chrY_T0000840:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9493125	9493206	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000840;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000840;transcript_name=HG002_chrY_T0000840;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000840:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9493207	9493900	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000840;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000840;transcript_name=HG002_chrY_T0000840;gene_name=TSPY4;ID=intron:HG002_chrY_T0000840:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9493901	9493990	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000840;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000840;transcript_name=HG002_chrY_T0000840;gene_name=TSPY4;ID=exon:HG002_chrY_T0000840:6;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9493901	9493923	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000840;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000840;transcript_name=HG002_chrY_T0000840;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000840:6;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9493921	9493923	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000840;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000840;transcript_name=HG002_chrY_T0000840;gene_name=TSPY4;ID=stop_codon:HG002_chrY_T0000840;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9491343	9494110	100	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000841;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_G0000264;transcript_name=HG002_chrY_T0000841;gene_name=TSPY4;ID=HG002_chrY_T0000841;Name=TSPY4
HG002_chrY	CAT	exon	9491343	9491846	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000841;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000841;transcript_name=HG002_chrY_T0000841;gene_name=TSPY4;ID=exon:HG002_chrY_T0000841:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9491343	9491846	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000841;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000841;transcript_name=HG002_chrY_T0000841;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000841:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9491343	9491345	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000841;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000841;transcript_name=HG002_chrY_T0000841;gene_name=TSPY4;ID=start_codon:HG002_chrY_T0000841;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9491847	9492453	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000841;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000841;transcript_name=HG002_chrY_T0000841;gene_name=TSPY4;ID=intron:HG002_chrY_T0000841:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9492454	9492531	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000841;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000841;transcript_name=HG002_chrY_T0000841;gene_name=TSPY4;ID=exon:HG002_chrY_T0000841:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9492454	9492531	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000841;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000841;transcript_name=HG002_chrY_T0000841;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000841:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9492532	9492659	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000841;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000841;transcript_name=HG002_chrY_T0000841;gene_name=TSPY4;ID=intron:HG002_chrY_T0000841:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9492660	9492771	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000841;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000841;transcript_name=HG002_chrY_T0000841;gene_name=TSPY4;ID=exon:HG002_chrY_T0000841:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9492660	9492771	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000841;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000841;transcript_name=HG002_chrY_T0000841;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000841:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9492772	9492872	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000841;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000841;transcript_name=HG002_chrY_T0000841;gene_name=TSPY4;ID=intron:HG002_chrY_T0000841:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9492873	9493018	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000841;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000841;transcript_name=HG002_chrY_T0000841;gene_name=TSPY4;ID=exon:HG002_chrY_T0000841:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9492873	9493018	.	+	2	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000841;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000841;transcript_name=HG002_chrY_T0000841;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000841:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9493019	9493113	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000841;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000841;transcript_name=HG002_chrY_T0000841;gene_name=TSPY4;ID=intron:HG002_chrY_T0000841:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9493114	9493206	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000841;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000841;transcript_name=HG002_chrY_T0000841;gene_name=TSPY4;ID=exon:HG002_chrY_T0000841:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9493114	9493176	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000841;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000841;transcript_name=HG002_chrY_T0000841;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000841:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9493174	9493176	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000841;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000841;transcript_name=HG002_chrY_T0000841;gene_name=TSPY4;ID=stop_codon:HG002_chrY_T0000841;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9493207	9493900	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000841;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000841;transcript_name=HG002_chrY_T0000841;gene_name=TSPY4;ID=intron:HG002_chrY_T0000841:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9493901	9494110	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000841;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000841;transcript_name=HG002_chrY_T0000841;gene_name=TSPY4;ID=exon:HG002_chrY_T0000841:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9491343	9494117	1000	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000842;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_G0000264;transcript_name=HG002_chrY_T0000842;gene_name=TSPY4;ID=HG002_chrY_T0000842;Name=TSPY4
HG002_chrY	CAT	exon	9491343	9491846	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000842;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000842;transcript_name=HG002_chrY_T0000842;gene_name=TSPY4;ID=exon:HG002_chrY_T0000842:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9491847	9492453	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000842;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000842;transcript_name=HG002_chrY_T0000842;gene_name=TSPY4;ID=intron:HG002_chrY_T0000842:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9492454	9492531	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000842;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000842;transcript_name=HG002_chrY_T0000842;gene_name=TSPY4;ID=exon:HG002_chrY_T0000842:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9492532	9492659	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000842;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000842;transcript_name=HG002_chrY_T0000842;gene_name=TSPY4;ID=intron:HG002_chrY_T0000842:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9492660	9493206	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000842;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000842;transcript_name=HG002_chrY_T0000842;gene_name=TSPY4;ID=exon:HG002_chrY_T0000842:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9493207	9493333	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000842;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000842;transcript_name=HG002_chrY_T0000842;gene_name=TSPY4;ID=intron:HG002_chrY_T0000842:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9493334	9494117	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000842;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000842;transcript_name=HG002_chrY_T0000842;gene_name=TSPY4;ID=exon:HG002_chrY_T0000842:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9492721	9494102	1000	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000843;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_G0000264;transcript_name=HG002_chrY_T0000843;gene_name=TSPY4;ID=HG002_chrY_T0000843;Name=TSPY4
HG002_chrY	CAT	exon	9492721	9493018	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000843;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000843;transcript_name=HG002_chrY_T0000843;gene_name=TSPY4;ID=exon:HG002_chrY_T0000843:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9493019	9493113	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000843;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000843;transcript_name=HG002_chrY_T0000843;gene_name=TSPY4;ID=intron:HG002_chrY_T0000843:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9493114	9493206	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000843;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000843;transcript_name=HG002_chrY_T0000843;gene_name=TSPY4;ID=exon:HG002_chrY_T0000843:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9493207	9493900	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000843;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000843;transcript_name=HG002_chrY_T0000843;gene_name=TSPY4;ID=intron:HG002_chrY_T0000843:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9493901	9494102	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000843;gene_id=HG002_chrY_G0000264;Parent=HG002_chrY_T0000843;transcript_name=HG002_chrY_T0000843;gene_name=TSPY4;ID=exon:HG002_chrY_T0000843:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9503239	9508978	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=HG002_chrY_G0000265;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000265;Name=FAM197Y5
HG002_chrY	CAT	transcript	9503239	9508978	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000844;gene_id=HG002_chrY_G0000265;Parent=HG002_chrY_G0000265;transcript_name=HG002_chrY_T0000844;gene_name=FAM197Y5;ID=HG002_chrY_T0000844;Name=FAM197Y5
HG002_chrY	CAT	exon	9503239	9503428	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000844;gene_id=HG002_chrY_G0000265;Parent=HG002_chrY_T0000844;transcript_name=HG002_chrY_T0000844;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000844:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9503429	9506977	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000844;gene_id=HG002_chrY_G0000265;Parent=HG002_chrY_T0000844;transcript_name=HG002_chrY_T0000844;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000844:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9506978	9507063	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000844;gene_id=HG002_chrY_G0000265;Parent=HG002_chrY_T0000844;transcript_name=HG002_chrY_T0000844;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000844:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9507064	9508864	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000844;gene_id=HG002_chrY_G0000265;Parent=HG002_chrY_T0000844;transcript_name=HG002_chrY_T0000844;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000844:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9508865	9508978	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000844;gene_id=HG002_chrY_G0000265;Parent=HG002_chrY_T0000844;transcript_name=HG002_chrY_T0000844;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000844:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9503369	9508966	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000845;gene_id=HG002_chrY_G0000265;Parent=HG002_chrY_G0000265;transcript_name=HG002_chrY_T0000845;gene_name=FAM197Y5;ID=HG002_chrY_T0000845;Name=FAM197Y5
HG002_chrY	CAT	exon	9503369	9503428	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000845;gene_id=HG002_chrY_G0000265;Parent=HG002_chrY_T0000845;transcript_name=HG002_chrY_T0000845;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000845:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9503429	9506977	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000845;gene_id=HG002_chrY_G0000265;Parent=HG002_chrY_T0000845;transcript_name=HG002_chrY_T0000845;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000845:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9506978	9507136	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000845;gene_id=HG002_chrY_G0000265;Parent=HG002_chrY_T0000845;transcript_name=HG002_chrY_T0000845;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000845:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9507137	9508632	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000845;gene_id=HG002_chrY_G0000265;Parent=HG002_chrY_T0000845;transcript_name=HG002_chrY_T0000845;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000845:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9508633	9508778	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000845;gene_id=HG002_chrY_G0000265;Parent=HG002_chrY_T0000845;transcript_name=HG002_chrY_T0000845;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000845:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9508779	9508864	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000845;gene_id=HG002_chrY_G0000265;Parent=HG002_chrY_T0000845;transcript_name=HG002_chrY_T0000845;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000845:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9508865	9508966	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000845;gene_id=HG002_chrY_G0000265;Parent=HG002_chrY_T0000845;transcript_name=HG002_chrY_T0000845;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000845:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9508633	9510625	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_7;gene_id=HG002_chrY_G0000266;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000266;Name=FAM197Y5
HG002_chrY	CAT	transcript	9508633	9510625	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000846;gene_id=HG002_chrY_G0000266;Parent=HG002_chrY_G0000266;transcript_name=HG002_chrY_T0000846;gene_name=FAM197Y5;ID=HG002_chrY_T0000846;Name=FAM197Y5
HG002_chrY	CAT	exon	9508633	9508778	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000846;gene_id=HG002_chrY_G0000266;Parent=HG002_chrY_T0000846;transcript_name=HG002_chrY_T0000846;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000846:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9508779	9510314	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000846;gene_id=HG002_chrY_G0000266;Parent=HG002_chrY_T0000846;transcript_name=HG002_chrY_T0000846;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000846:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9510315	9510625	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000846;gene_id=HG002_chrY_G0000266;Parent=HG002_chrY_T0000846;transcript_name=HG002_chrY_T0000846;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000846:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9511579	9514375	.	+	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;gene_id=HG002_chrY_G0000267;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=HG002_chrY_G0000267;Name=TSPY3
HG002_chrY	CAT	transcript	9511579	9514375	100	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000847;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_G0000267;transcript_name=HG002_chrY_T0000847;gene_name=TSPY3;ID=HG002_chrY_T0000847;Name=TSPY3
HG002_chrY	CAT	exon	9511579	9512110	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000847;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000847;transcript_name=HG002_chrY_T0000847;gene_name=TSPY3;ID=exon:HG002_chrY_T0000847:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9511625	9512110	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000847;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000847;transcript_name=HG002_chrY_T0000847;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000847:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9511625	9511627	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000847;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000847;transcript_name=HG002_chrY_T0000847;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000847;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9512111	9512717	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000847;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000847;transcript_name=HG002_chrY_T0000847;gene_name=TSPY3;ID=intron:HG002_chrY_T0000847:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9512718	9512795	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000847;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000847;transcript_name=HG002_chrY_T0000847;gene_name=TSPY3;ID=exon:HG002_chrY_T0000847:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9512718	9512795	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000847;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000847;transcript_name=HG002_chrY_T0000847;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000847:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9512796	9512923	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000847;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000847;transcript_name=HG002_chrY_T0000847;gene_name=TSPY3;ID=intron:HG002_chrY_T0000847:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9512924	9513035	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000847;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000847;transcript_name=HG002_chrY_T0000847;gene_name=TSPY3;ID=exon:HG002_chrY_T0000847:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9512924	9513035	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000847;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000847;transcript_name=HG002_chrY_T0000847;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000847:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9513036	9513136	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000847;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000847;transcript_name=HG002_chrY_T0000847;gene_name=TSPY3;ID=intron:HG002_chrY_T0000847:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9513137	9513282	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000847;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000847;transcript_name=HG002_chrY_T0000847;gene_name=TSPY3;ID=exon:HG002_chrY_T0000847:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9513137	9513282	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000847;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000847;transcript_name=HG002_chrY_T0000847;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000847:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9513283	9513388	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000847;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000847;transcript_name=HG002_chrY_T0000847;gene_name=TSPY3;ID=intron:HG002_chrY_T0000847:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9513389	9513470	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000847;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000847;transcript_name=HG002_chrY_T0000847;gene_name=TSPY3;ID=exon:HG002_chrY_T0000847:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9513389	9513470	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000847;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000847;transcript_name=HG002_chrY_T0000847;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000847:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9513471	9514164	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000847;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000847;transcript_name=HG002_chrY_T0000847;gene_name=TSPY3;ID=intron:HG002_chrY_T0000847:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9514165	9514375	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000847;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000847;transcript_name=HG002_chrY_T0000847;gene_name=TSPY3;ID=exon:HG002_chrY_T0000847:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9514165	9514187	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000847;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000847;transcript_name=HG002_chrY_T0000847;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000847:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9514185	9514187	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000847;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000847;transcript_name=HG002_chrY_T0000847;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000847;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9511625	9514374	100	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000848;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_G0000267;transcript_name=HG002_chrY_T0000848;gene_name=TSPY3;ID=HG002_chrY_T0000848;Name=TSPY3
HG002_chrY	CAT	exon	9511625	9512110	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000848;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000848;transcript_name=HG002_chrY_T0000848;gene_name=TSPY3;ID=exon:HG002_chrY_T0000848:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9511625	9512110	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000848;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000848;transcript_name=HG002_chrY_T0000848;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000848:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9511625	9511627	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000848;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000848;transcript_name=HG002_chrY_T0000848;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000848;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9512111	9512717	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000848;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000848;transcript_name=HG002_chrY_T0000848;gene_name=TSPY3;ID=intron:HG002_chrY_T0000848:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9512718	9512795	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000848;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000848;transcript_name=HG002_chrY_T0000848;gene_name=TSPY3;ID=exon:HG002_chrY_T0000848:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9512718	9512795	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000848;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000848;transcript_name=HG002_chrY_T0000848;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000848:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9512796	9512923	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000848;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000848;transcript_name=HG002_chrY_T0000848;gene_name=TSPY3;ID=intron:HG002_chrY_T0000848:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9512924	9513035	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000848;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000848;transcript_name=HG002_chrY_T0000848;gene_name=TSPY3;ID=exon:HG002_chrY_T0000848:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9512924	9513035	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000848;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000848;transcript_name=HG002_chrY_T0000848;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000848:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9513036	9513136	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000848;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000848;transcript_name=HG002_chrY_T0000848;gene_name=TSPY3;ID=intron:HG002_chrY_T0000848:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9513137	9513282	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000848;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000848;transcript_name=HG002_chrY_T0000848;gene_name=TSPY3;ID=exon:HG002_chrY_T0000848:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9513137	9513282	.	+	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000848;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000848;transcript_name=HG002_chrY_T0000848;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000848:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9513283	9513377	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000848;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000848;transcript_name=HG002_chrY_T0000848;gene_name=TSPY3;ID=intron:HG002_chrY_T0000848:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9513378	9513470	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000848;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000848;transcript_name=HG002_chrY_T0000848;gene_name=TSPY3;ID=exon:HG002_chrY_T0000848:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9513378	9513440	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000848;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000848;transcript_name=HG002_chrY_T0000848;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000848:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9513438	9513440	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000848;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000848;transcript_name=HG002_chrY_T0000848;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000848;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9513471	9514164	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000848;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000848;transcript_name=HG002_chrY_T0000848;gene_name=TSPY3;ID=intron:HG002_chrY_T0000848:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9514165	9514374	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000848;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000848;transcript_name=HG002_chrY_T0000848;gene_name=TSPY3;ID=exon:HG002_chrY_T0000848:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9511625	9514187	100	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000849;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_G0000267;transcript_name=HG002_chrY_T0000849;gene_name=TSPY3;ID=HG002_chrY_T0000849;Name=TSPY3
HG002_chrY	CAT	exon	9511625	9511711	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000849;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000849;transcript_name=HG002_chrY_T0000849;gene_name=TSPY3;ID=exon:HG002_chrY_T0000849:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9511625	9511711	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000849;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000849;transcript_name=HG002_chrY_T0000849;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000849:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9511625	9511627	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000849;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000849;transcript_name=HG002_chrY_T0000849;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000849;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9511712	9511972	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000849;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000849;transcript_name=HG002_chrY_T0000849;gene_name=TSPY3;ID=intron:HG002_chrY_T0000849:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9511973	9512110	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000849;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000849;transcript_name=HG002_chrY_T0000849;gene_name=TSPY3;ID=exon:HG002_chrY_T0000849:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9511973	9512110	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000849;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000849;transcript_name=HG002_chrY_T0000849;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000849:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9512111	9512717	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000849;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000849;transcript_name=HG002_chrY_T0000849;gene_name=TSPY3;ID=intron:HG002_chrY_T0000849:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9512718	9512795	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000849;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000849;transcript_name=HG002_chrY_T0000849;gene_name=TSPY3;ID=exon:HG002_chrY_T0000849:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9512718	9512795	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000849;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000849;transcript_name=HG002_chrY_T0000849;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000849:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9512796	9512923	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000849;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000849;transcript_name=HG002_chrY_T0000849;gene_name=TSPY3;ID=intron:HG002_chrY_T0000849:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9512924	9513035	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000849;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000849;transcript_name=HG002_chrY_T0000849;gene_name=TSPY3;ID=exon:HG002_chrY_T0000849:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9512924	9513035	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000849;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000849;transcript_name=HG002_chrY_T0000849;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000849:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9513036	9513136	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000849;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000849;transcript_name=HG002_chrY_T0000849;gene_name=TSPY3;ID=intron:HG002_chrY_T0000849:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9513137	9513282	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000849;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000849;transcript_name=HG002_chrY_T0000849;gene_name=TSPY3;ID=exon:HG002_chrY_T0000849:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9513137	9513282	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000849;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000849;transcript_name=HG002_chrY_T0000849;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000849:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9513283	9513388	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000849;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000849;transcript_name=HG002_chrY_T0000849;gene_name=TSPY3;ID=intron:HG002_chrY_T0000849:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9513389	9513470	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000849;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000849;transcript_name=HG002_chrY_T0000849;gene_name=TSPY3;ID=exon:HG002_chrY_T0000849:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9513389	9513470	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000849;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000849;transcript_name=HG002_chrY_T0000849;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000849:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9513471	9514164	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000849;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000849;transcript_name=HG002_chrY_T0000849;gene_name=TSPY3;ID=intron:HG002_chrY_T0000849:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9514165	9514187	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000849;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000849;transcript_name=HG002_chrY_T0000849;gene_name=TSPY3;ID=exon:HG002_chrY_T0000849:6;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9514165	9514187	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000849;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000849;transcript_name=HG002_chrY_T0000849;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000849:6;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9514185	9514187	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000849;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000849;transcript_name=HG002_chrY_T0000849;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000849;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9511625	9514381	1000	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000850;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_G0000267;transcript_name=HG002_chrY_T0000850;gene_name=TSPY3;ID=HG002_chrY_T0000850;Name=TSPY3
HG002_chrY	CAT	exon	9511625	9512110	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000850;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000850;transcript_name=HG002_chrY_T0000850;gene_name=TSPY3;ID=exon:HG002_chrY_T0000850:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9512111	9512717	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000850;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000850;transcript_name=HG002_chrY_T0000850;gene_name=TSPY3;ID=intron:HG002_chrY_T0000850:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9512718	9512795	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000850;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000850;transcript_name=HG002_chrY_T0000850;gene_name=TSPY3;ID=exon:HG002_chrY_T0000850:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9512796	9512923	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000850;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000850;transcript_name=HG002_chrY_T0000850;gene_name=TSPY3;ID=intron:HG002_chrY_T0000850:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9512924	9513470	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000850;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000850;transcript_name=HG002_chrY_T0000850;gene_name=TSPY3;ID=exon:HG002_chrY_T0000850:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9513471	9513597	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000850;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000850;transcript_name=HG002_chrY_T0000850;gene_name=TSPY3;ID=intron:HG002_chrY_T0000850:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9513598	9514381	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000850;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000850;transcript_name=HG002_chrY_T0000850;gene_name=TSPY3;ID=exon:HG002_chrY_T0000850:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9512985	9514366	1000	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000851;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_G0000267;transcript_name=HG002_chrY_T0000851;gene_name=TSPY3;ID=HG002_chrY_T0000851;Name=TSPY3
HG002_chrY	CAT	exon	9512985	9513282	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000851;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000851;transcript_name=HG002_chrY_T0000851;gene_name=TSPY3;ID=exon:HG002_chrY_T0000851:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9513283	9513377	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000851;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000851;transcript_name=HG002_chrY_T0000851;gene_name=TSPY3;ID=intron:HG002_chrY_T0000851:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9513378	9513470	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000851;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000851;transcript_name=HG002_chrY_T0000851;gene_name=TSPY3;ID=exon:HG002_chrY_T0000851:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9513471	9514164	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000851;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000851;transcript_name=HG002_chrY_T0000851;gene_name=TSPY3;ID=intron:HG002_chrY_T0000851:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9514165	9514366	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000851;gene_id=HG002_chrY_G0000267;Parent=HG002_chrY_T0000851;transcript_name=HG002_chrY_T0000851;gene_name=TSPY3;ID=exon:HG002_chrY_T0000851:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9523501	9529243	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=HG002_chrY_G0000268;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000268;Name=FAM197Y5
HG002_chrY	CAT	transcript	9523501	9529243	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000852;gene_id=HG002_chrY_G0000268;Parent=HG002_chrY_G0000268;transcript_name=HG002_chrY_T0000852;gene_name=FAM197Y5;ID=HG002_chrY_T0000852;Name=FAM197Y5
HG002_chrY	CAT	exon	9523501	9523690	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000852;gene_id=HG002_chrY_G0000268;Parent=HG002_chrY_T0000852;transcript_name=HG002_chrY_T0000852;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000852:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9523691	9527244	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000852;gene_id=HG002_chrY_G0000268;Parent=HG002_chrY_T0000852;transcript_name=HG002_chrY_T0000852;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000852:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9527245	9527330	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000852;gene_id=HG002_chrY_G0000268;Parent=HG002_chrY_T0000852;transcript_name=HG002_chrY_T0000852;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000852:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9527331	9529129	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000852;gene_id=HG002_chrY_G0000268;Parent=HG002_chrY_T0000852;transcript_name=HG002_chrY_T0000852;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000852:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9529130	9529243	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000852;gene_id=HG002_chrY_G0000268;Parent=HG002_chrY_T0000852;transcript_name=HG002_chrY_T0000852;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000852:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9523631	9529231	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000853;gene_id=HG002_chrY_G0000268;Parent=HG002_chrY_G0000268;transcript_name=HG002_chrY_T0000853;gene_name=FAM197Y5;ID=HG002_chrY_T0000853;Name=FAM197Y5
HG002_chrY	CAT	exon	9523631	9523690	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000853;gene_id=HG002_chrY_G0000268;Parent=HG002_chrY_T0000853;transcript_name=HG002_chrY_T0000853;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000853:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9523691	9527244	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000853;gene_id=HG002_chrY_G0000268;Parent=HG002_chrY_T0000853;transcript_name=HG002_chrY_T0000853;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000853:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9527245	9527403	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000853;gene_id=HG002_chrY_G0000268;Parent=HG002_chrY_T0000853;transcript_name=HG002_chrY_T0000853;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000853:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9527404	9528897	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000853;gene_id=HG002_chrY_G0000268;Parent=HG002_chrY_T0000853;transcript_name=HG002_chrY_T0000853;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000853:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9528898	9529043	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000853;gene_id=HG002_chrY_G0000268;Parent=HG002_chrY_T0000853;transcript_name=HG002_chrY_T0000853;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000853:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9529044	9529129	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000853;gene_id=HG002_chrY_G0000268;Parent=HG002_chrY_T0000853;transcript_name=HG002_chrY_T0000853;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000853:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9529130	9529231	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000853;gene_id=HG002_chrY_G0000268;Parent=HG002_chrY_T0000853;transcript_name=HG002_chrY_T0000853;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000853:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9528898	9530890	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_17;gene_id=HG002_chrY_G0000269;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000269;Name=FAM197Y5
HG002_chrY	CAT	transcript	9528898	9530890	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_17;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_17;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000854;gene_id=HG002_chrY_G0000269;Parent=HG002_chrY_G0000269;transcript_name=HG002_chrY_T0000854;gene_name=FAM197Y5;ID=HG002_chrY_T0000854;Name=FAM197Y5
HG002_chrY	CAT	exon	9528898	9529043	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_17;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_17;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000854;gene_id=HG002_chrY_G0000269;Parent=HG002_chrY_T0000854;transcript_name=HG002_chrY_T0000854;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000854:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9529044	9530579	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_17;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_17;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000854;gene_id=HG002_chrY_G0000269;Parent=HG002_chrY_T0000854;transcript_name=HG002_chrY_T0000854;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000854:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9530580	9530890	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_17;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_17;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000854;gene_id=HG002_chrY_G0000269;Parent=HG002_chrY_T0000854;transcript_name=HG002_chrY_T0000854;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000854:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9531884	9534670	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1_1;gene_id=HG002_chrY_G0000270;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=HG002_chrY_G0000270;Name=ENSG00000293749
HG002_chrY	CAT	transcript	9531884	9534670	1000	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000855;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_G0000270;transcript_name=HG002_chrY_T0000855;gene_name=ENSG00000293749;ID=HG002_chrY_T0000855;Name=ENSG00000293749
HG002_chrY	CAT	exon	9531884	9531976	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000855;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000855;transcript_name=HG002_chrY_T0000855;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000855:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9531977	9532255	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000855;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000855;transcript_name=HG002_chrY_T0000855;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000855:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9532256	9532393	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000855;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000855;transcript_name=HG002_chrY_T0000855;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000855:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9532394	9533000	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000855;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000855;transcript_name=HG002_chrY_T0000855;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000855:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9533001	9533078	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000855;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000855;transcript_name=HG002_chrY_T0000855;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000855:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9533079	9533206	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000855;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000855;transcript_name=HG002_chrY_T0000855;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000855:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9533207	9533318	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000855;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000855;transcript_name=HG002_chrY_T0000855;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000855:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9533319	9533419	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000855;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000855;transcript_name=HG002_chrY_T0000855;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000855:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9533420	9533565	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000855;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000855;transcript_name=HG002_chrY_T0000855;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000855:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9533566	9533671	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000855;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000855;transcript_name=HG002_chrY_T0000855;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000855:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9533672	9533753	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000855;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000855;transcript_name=HG002_chrY_T0000855;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000855:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9533754	9534447	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000855;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000855;transcript_name=HG002_chrY_T0000855;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000855:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9534448	9534670	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000855;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000855;transcript_name=HG002_chrY_T0000855;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000855:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9531896	9534658	1000	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000857;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_G0000270;transcript_name=HG002_chrY_T0000857;gene_name=ENSG00000293749;ID=HG002_chrY_T0000857;Name=ENSG00000293749
HG002_chrY	CAT	exon	9531896	9531976	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000857;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000857;transcript_name=HG002_chrY_T0000857;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000857:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9531977	9532255	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000857;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000857;transcript_name=HG002_chrY_T0000857;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000857:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9532256	9532393	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000857;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000857;transcript_name=HG002_chrY_T0000857;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000857:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9532394	9533000	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000857;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000857;transcript_name=HG002_chrY_T0000857;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000857:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9533001	9533078	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000857;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000857;transcript_name=HG002_chrY_T0000857;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000857:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9533079	9533206	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000857;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000857;transcript_name=HG002_chrY_T0000857;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000857:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9533207	9533318	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000857;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000857;transcript_name=HG002_chrY_T0000857;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000857:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9533319	9533426	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000857;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000857;transcript_name=HG002_chrY_T0000857;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000857:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9533427	9533565	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000857;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000857;transcript_name=HG002_chrY_T0000857;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000857:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9533566	9533671	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000857;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000857;transcript_name=HG002_chrY_T0000857;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000857:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9533672	9533753	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000857;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000857;transcript_name=HG002_chrY_T0000857;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000857:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9533754	9534447	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000857;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000857;transcript_name=HG002_chrY_T0000857;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000857:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9534448	9534658	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000857;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000857;transcript_name=HG002_chrY_T0000857;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000857:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9531905	9534665	1000	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000858;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_G0000270;transcript_name=HG002_chrY_T0000858;gene_name=ENSG00000293749;ID=HG002_chrY_T0000858;Name=ENSG00000293749
HG002_chrY	CAT	exon	9531905	9531976	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000858;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000858;transcript_name=HG002_chrY_T0000858;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000858:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9531977	9532255	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000858;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000858;transcript_name=HG002_chrY_T0000858;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000858:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9532256	9532393	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000858;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000858;transcript_name=HG002_chrY_T0000858;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000858:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9532394	9533000	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000858;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000858;transcript_name=HG002_chrY_T0000858;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000858:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9533001	9533078	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000858;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000858;transcript_name=HG002_chrY_T0000858;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000858:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9533079	9533206	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000858;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000858;transcript_name=HG002_chrY_T0000858;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000858:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9533207	9533318	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000858;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000858;transcript_name=HG002_chrY_T0000858;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000858:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9533319	9533419	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000858;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000858;transcript_name=HG002_chrY_T0000858;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000858:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9533420	9533565	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000858;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000858;transcript_name=HG002_chrY_T0000858;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000858:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9533566	9533660	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000858;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000858;transcript_name=HG002_chrY_T0000858;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000858:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9533661	9533753	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000858;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000858;transcript_name=HG002_chrY_T0000858;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000858:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9533754	9534447	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000858;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000858;transcript_name=HG002_chrY_T0000858;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000858:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9534448	9534665	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000858;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000858;transcript_name=HG002_chrY_T0000858;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000858:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9532125	9534663	1000	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000859;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_G0000270;transcript_name=HG002_chrY_T0000859;gene_name=ENSG00000293749;ID=HG002_chrY_T0000859;Name=ENSG00000293749
HG002_chrY	CAT	exon	9532125	9532393	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000859;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000859;transcript_name=HG002_chrY_T0000859;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000859:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9532394	9533000	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000859;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000859;transcript_name=HG002_chrY_T0000859;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000859:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9533001	9533078	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000859;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000859;transcript_name=HG002_chrY_T0000859;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000859:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9533079	9533206	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000859;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000859;transcript_name=HG002_chrY_T0000859;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000859:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9533207	9533318	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000859;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000859;transcript_name=HG002_chrY_T0000859;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000859:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9533319	9533419	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000859;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000859;transcript_name=HG002_chrY_T0000859;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000859:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9533420	9533565	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000859;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000859;transcript_name=HG002_chrY_T0000859;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000859:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9533566	9533671	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000859;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000859;transcript_name=HG002_chrY_T0000859;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000859:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9533672	9533753	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000859;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000859;transcript_name=HG002_chrY_T0000859;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000859:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9533754	9534447	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000859;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000859;transcript_name=HG002_chrY_T0000859;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000859:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9534448	9534663	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000859;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000859;transcript_name=HG002_chrY_T0000859;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000859:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9532221	9534658	1000	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000860;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_G0000270;transcript_name=HG002_chrY_T0000860;gene_name=ENSG00000293749;ID=HG002_chrY_T0000860;Name=ENSG00000293749
HG002_chrY	CAT	exon	9532221	9532393	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000860;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000860;transcript_name=HG002_chrY_T0000860;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000860:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9532394	9533000	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000860;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000860;transcript_name=HG002_chrY_T0000860;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000860:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9533001	9533078	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000860;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000860;transcript_name=HG002_chrY_T0000860;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000860:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9533079	9533206	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000860;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000860;transcript_name=HG002_chrY_T0000860;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000860:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9533207	9533318	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000860;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000860;transcript_name=HG002_chrY_T0000860;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000860:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9533319	9533426	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000860;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000860;transcript_name=HG002_chrY_T0000860;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000860:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9533427	9533565	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000860;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000860;transcript_name=HG002_chrY_T0000860;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000860:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9533566	9533671	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000860;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000860;transcript_name=HG002_chrY_T0000860;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000860:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9533672	9533753	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000860;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000860;transcript_name=HG002_chrY_T0000860;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000860:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9533754	9534447	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000860;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000860;transcript_name=HG002_chrY_T0000860;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000860:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9534448	9534658	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000860;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000860;transcript_name=HG002_chrY_T0000860;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000860:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9532347	9534669	1000	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000861;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_G0000270;transcript_name=HG002_chrY_T0000861;gene_name=ENSG00000293749;ID=HG002_chrY_T0000861;Name=ENSG00000293749
HG002_chrY	CAT	exon	9532347	9532449	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000861;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000861;transcript_name=HG002_chrY_T0000861;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000861:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9532450	9533018	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000861;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000861;transcript_name=HG002_chrY_T0000861;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000861:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9533019	9533078	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000861;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000861;transcript_name=HG002_chrY_T0000861;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000861:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9533079	9533206	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000861;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000861;transcript_name=HG002_chrY_T0000861;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000861:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9533207	9533318	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000861;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000861;transcript_name=HG002_chrY_T0000861;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000861:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9533319	9533419	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000861;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000861;transcript_name=HG002_chrY_T0000861;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000861:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9533420	9533565	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000861;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000861;transcript_name=HG002_chrY_T0000861;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000861:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9533566	9533671	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000861;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000861;transcript_name=HG002_chrY_T0000861;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000861:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9533672	9533753	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000861;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000861;transcript_name=HG002_chrY_T0000861;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000861:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9533754	9534447	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000861;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000861;transcript_name=HG002_chrY_T0000861;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000861:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9534448	9534669	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000861;gene_id=HG002_chrY_G0000270;Parent=HG002_chrY_T0000861;transcript_name=HG002_chrY_T0000861;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000861:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9531890	9534470	.	+	.	source_gene_common_name=TSPY6P;source_gene=ENSG00000270073.1;gene_id=HG002_chrY_G0000271;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY6P;gene_sources=liftoff;ID=HG002_chrY_G0000271;Name=TSPY6P
HG002_chrY	CAT	transcript	9531890	9534470	1000	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000856;gene_id=HG002_chrY_G0000271;Parent=HG002_chrY_G0000271;transcript_name=HG002_chrY_T0000856;gene_name=TSPY6P;ID=HG002_chrY_T0000856;Name=TSPY6P
HG002_chrY	CAT	exon	9531890	9532108	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000856;gene_id=HG002_chrY_G0000271;Parent=HG002_chrY_T0000856;transcript_name=HG002_chrY_T0000856;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000856:0;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9532109	9532126	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000856;gene_id=HG002_chrY_G0000271;Parent=HG002_chrY_T0000856;transcript_name=HG002_chrY_T0000856;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000856:0;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9532127	9532393	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000856;gene_id=HG002_chrY_G0000271;Parent=HG002_chrY_T0000856;transcript_name=HG002_chrY_T0000856;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000856:1;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9532394	9533000	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000856;gene_id=HG002_chrY_G0000271;Parent=HG002_chrY_T0000856;transcript_name=HG002_chrY_T0000856;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000856:1;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9533001	9533078	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000856;gene_id=HG002_chrY_G0000271;Parent=HG002_chrY_T0000856;transcript_name=HG002_chrY_T0000856;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000856:2;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9533079	9533206	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000856;gene_id=HG002_chrY_G0000271;Parent=HG002_chrY_T0000856;transcript_name=HG002_chrY_T0000856;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000856:2;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9533207	9533318	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000856;gene_id=HG002_chrY_G0000271;Parent=HG002_chrY_T0000856;transcript_name=HG002_chrY_T0000856;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000856:3;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9533319	9533419	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000856;gene_id=HG002_chrY_G0000271;Parent=HG002_chrY_T0000856;transcript_name=HG002_chrY_T0000856;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000856:3;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9533420	9533565	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000856;gene_id=HG002_chrY_G0000271;Parent=HG002_chrY_T0000856;transcript_name=HG002_chrY_T0000856;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000856:4;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9533566	9533671	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000856;gene_id=HG002_chrY_G0000271;Parent=HG002_chrY_T0000856;transcript_name=HG002_chrY_T0000856;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000856:4;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9533672	9533753	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000856;gene_id=HG002_chrY_G0000271;Parent=HG002_chrY_T0000856;transcript_name=HG002_chrY_T0000856;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000856:5;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9533754	9534447	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000856;gene_id=HG002_chrY_G0000271;Parent=HG002_chrY_T0000856;transcript_name=HG002_chrY_T0000856;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000856:5;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9534448	9534470	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000856;gene_id=HG002_chrY_G0000271;Parent=HG002_chrY_T0000856;transcript_name=HG002_chrY_T0000856;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000856:6;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9533048	9534665	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1;gene_id=HG002_chrY_G0000272;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=HG002_chrY_G0000272;Name=ENSG00000293749
HG002_chrY	CAT	transcript	9533048	9534656	1000	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000862;gene_id=HG002_chrY_G0000272;Parent=HG002_chrY_G0000272;transcript_name=HG002_chrY_T0000862;gene_name=ENSG00000293749;ID=HG002_chrY_T0000862;Name=ENSG00000293749
HG002_chrY	CAT	exon	9533048	9533078	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000862;gene_id=HG002_chrY_G0000272;Parent=HG002_chrY_T0000862;transcript_name=HG002_chrY_T0000862;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000862:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9533079	9533206	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000862;gene_id=HG002_chrY_G0000272;Parent=HG002_chrY_T0000862;transcript_name=HG002_chrY_T0000862;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000862:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9533207	9533565	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000862;gene_id=HG002_chrY_G0000272;Parent=HG002_chrY_T0000862;transcript_name=HG002_chrY_T0000862;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000862:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9533566	9533671	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000862;gene_id=HG002_chrY_G0000272;Parent=HG002_chrY_T0000862;transcript_name=HG002_chrY_T0000862;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000862:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9533672	9533753	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000862;gene_id=HG002_chrY_G0000272;Parent=HG002_chrY_T0000862;transcript_name=HG002_chrY_T0000862;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000862:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9533754	9534447	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000862;gene_id=HG002_chrY_G0000272;Parent=HG002_chrY_T0000862;transcript_name=HG002_chrY_T0000862;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000862:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9534448	9534656	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000862;gene_id=HG002_chrY_G0000272;Parent=HG002_chrY_T0000862;transcript_name=HG002_chrY_T0000862;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000862:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9533593	9534665	1000	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000863;gene_id=HG002_chrY_G0000272;Parent=HG002_chrY_G0000272;transcript_name=HG002_chrY_T0000863;gene_name=ENSG00000293749;ID=HG002_chrY_T0000863;Name=ENSG00000293749
HG002_chrY	CAT	exon	9533593	9533753	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000863;gene_id=HG002_chrY_G0000272;Parent=HG002_chrY_T0000863;transcript_name=HG002_chrY_T0000863;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000863:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9533754	9534447	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000863;gene_id=HG002_chrY_G0000272;Parent=HG002_chrY_T0000863;transcript_name=HG002_chrY_T0000863;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000863:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9534448	9534665	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000863;gene_id=HG002_chrY_G0000272;Parent=HG002_chrY_T0000863;transcript_name=HG002_chrY_T0000863;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000863:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9541860	9549548	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1_4;gene_id=HG002_chrY_G0000273;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG002_chrY_G0000273;Name=FAM197Y9
HG002_chrY	CAT	transcript	9541860	9549548	1000	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000864;gene_id=HG002_chrY_G0000273;Parent=HG002_chrY_G0000273;transcript_name=HG002_chrY_T0000864;gene_name=FAM197Y9;ID=HG002_chrY_T0000864;Name=FAM197Y9
HG002_chrY	CAT	exon	9541860	9543986	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000864;gene_id=HG002_chrY_G0000273;Parent=HG002_chrY_T0000864;transcript_name=HG002_chrY_T0000864;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000864:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9543987	9547537	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000864;gene_id=HG002_chrY_G0000273;Parent=HG002_chrY_T0000864;transcript_name=HG002_chrY_T0000864;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000864:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9547538	9547623	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000864;gene_id=HG002_chrY_G0000273;Parent=HG002_chrY_T0000864;transcript_name=HG002_chrY_T0000864;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000864:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9547624	9549428	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000864;gene_id=HG002_chrY_G0000273;Parent=HG002_chrY_T0000864;transcript_name=HG002_chrY_T0000864;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000864:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9549429	9549548	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000864;gene_id=HG002_chrY_G0000273;Parent=HG002_chrY_T0000864;transcript_name=HG002_chrY_T0000864;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000864:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9543927	9549530	1000	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000865;gene_id=HG002_chrY_G0000273;Parent=HG002_chrY_G0000273;transcript_name=HG002_chrY_T0000865;gene_name=FAM197Y9;ID=HG002_chrY_T0000865;Name=FAM197Y9
HG002_chrY	CAT	exon	9543927	9543986	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000865;gene_id=HG002_chrY_G0000273;Parent=HG002_chrY_T0000865;transcript_name=HG002_chrY_T0000865;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000865:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9543987	9547537	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000865;gene_id=HG002_chrY_G0000273;Parent=HG002_chrY_T0000865;transcript_name=HG002_chrY_T0000865;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000865:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9547538	9547696	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000865;gene_id=HG002_chrY_G0000273;Parent=HG002_chrY_T0000865;transcript_name=HG002_chrY_T0000865;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000865:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9547697	9549196	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000865;gene_id=HG002_chrY_G0000273;Parent=HG002_chrY_T0000865;transcript_name=HG002_chrY_T0000865;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000865:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9549197	9549342	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000865;gene_id=HG002_chrY_G0000273;Parent=HG002_chrY_T0000865;transcript_name=HG002_chrY_T0000865;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000865:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9549343	9549428	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000865;gene_id=HG002_chrY_G0000273;Parent=HG002_chrY_T0000865;transcript_name=HG002_chrY_T0000865;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000865:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9549429	9549530	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000865;gene_id=HG002_chrY_G0000273;Parent=HG002_chrY_T0000865;transcript_name=HG002_chrY_T0000865;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000865:3;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9549197	9551190	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9_2;gene_id=HG002_chrY_G0000274;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG002_chrY_G0000274;Name=FAM197Y9
HG002_chrY	CAT	transcript	9549197	9551190	1000	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000866;gene_id=HG002_chrY_G0000274;Parent=HG002_chrY_G0000274;transcript_name=HG002_chrY_T0000866;gene_name=FAM197Y9;ID=HG002_chrY_T0000866;Name=FAM197Y9
HG002_chrY	CAT	exon	9549197	9549342	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000866;gene_id=HG002_chrY_G0000274;Parent=HG002_chrY_T0000866;transcript_name=HG002_chrY_T0000866;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000866:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9549343	9549454	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000866;gene_id=HG002_chrY_G0000274;Parent=HG002_chrY_T0000866;transcript_name=HG002_chrY_T0000866;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000866:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9549455	9549538	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000866;gene_id=HG002_chrY_G0000274;Parent=HG002_chrY_T0000866;transcript_name=HG002_chrY_T0000866;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000866:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9549539	9550880	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000866;gene_id=HG002_chrY_G0000274;Parent=HG002_chrY_T0000866;transcript_name=HG002_chrY_T0000866;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000866:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9550881	9551190	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000866;gene_id=HG002_chrY_G0000274;Parent=HG002_chrY_T0000866;transcript_name=HG002_chrY_T0000866;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000866:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9552183	9554951	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1_2;gene_id=HG002_chrY_G0000275;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=HG002_chrY_G0000275;Name=ENSG00000293749
HG002_chrY	CAT	transcript	9552183	9554951	1000	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000867;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_G0000275;transcript_name=HG002_chrY_T0000867;gene_name=ENSG00000293749;ID=HG002_chrY_T0000867;Name=ENSG00000293749
HG002_chrY	CAT	exon	9552183	9552275	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000867;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000867;transcript_name=HG002_chrY_T0000867;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000867:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9552276	9552536	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000867;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000867;transcript_name=HG002_chrY_T0000867;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000867:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9552537	9552674	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000867;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000867;transcript_name=HG002_chrY_T0000867;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000867:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9552675	9553281	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000867;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000867;transcript_name=HG002_chrY_T0000867;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000867:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9553282	9553359	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000867;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000867;transcript_name=HG002_chrY_T0000867;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000867:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9553360	9553487	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000867;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000867;transcript_name=HG002_chrY_T0000867;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000867:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9553488	9553599	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000867;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000867;transcript_name=HG002_chrY_T0000867;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000867:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9553600	9553700	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000867;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000867;transcript_name=HG002_chrY_T0000867;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000867:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9553701	9553846	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000867;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000867;transcript_name=HG002_chrY_T0000867;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000867:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9553847	9553952	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000867;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000867;transcript_name=HG002_chrY_T0000867;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000867:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9553953	9554034	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000867;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000867;transcript_name=HG002_chrY_T0000867;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000867:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9554035	9554728	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000867;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000867;transcript_name=HG002_chrY_T0000867;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000867:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9554729	9554951	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000867;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000867;transcript_name=HG002_chrY_T0000867;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000867:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9552195	9554939	1000	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000869;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_G0000275;transcript_name=HG002_chrY_T0000869;gene_name=ENSG00000293749;ID=HG002_chrY_T0000869;Name=ENSG00000293749
HG002_chrY	CAT	exon	9552195	9552275	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000869;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000869;transcript_name=HG002_chrY_T0000869;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000869:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9552276	9552536	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000869;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000869;transcript_name=HG002_chrY_T0000869;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000869:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9552537	9552674	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000869;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000869;transcript_name=HG002_chrY_T0000869;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000869:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9552675	9553281	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000869;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000869;transcript_name=HG002_chrY_T0000869;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000869:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9553282	9553359	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000869;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000869;transcript_name=HG002_chrY_T0000869;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000869:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9553360	9553487	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000869;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000869;transcript_name=HG002_chrY_T0000869;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000869:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9553488	9553599	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000869;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000869;transcript_name=HG002_chrY_T0000869;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000869:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9553600	9553707	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000869;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000869;transcript_name=HG002_chrY_T0000869;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000869:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9553708	9553846	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000869;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000869;transcript_name=HG002_chrY_T0000869;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000869:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9553847	9553952	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000869;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000869;transcript_name=HG002_chrY_T0000869;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000869:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9553953	9554034	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000869;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000869;transcript_name=HG002_chrY_T0000869;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000869:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9554035	9554728	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000869;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000869;transcript_name=HG002_chrY_T0000869;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000869:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9554729	9554939	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000869;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000869;transcript_name=HG002_chrY_T0000869;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000869:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9552204	9554946	1000	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000870;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_G0000275;transcript_name=HG002_chrY_T0000870;gene_name=ENSG00000293749;ID=HG002_chrY_T0000870;Name=ENSG00000293749
HG002_chrY	CAT	exon	9552204	9552275	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000870;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000870;transcript_name=HG002_chrY_T0000870;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000870:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9552276	9552536	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000870;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000870;transcript_name=HG002_chrY_T0000870;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000870:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9552537	9552674	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000870;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000870;transcript_name=HG002_chrY_T0000870;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000870:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9552675	9553281	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000870;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000870;transcript_name=HG002_chrY_T0000870;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000870:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9553282	9553359	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000870;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000870;transcript_name=HG002_chrY_T0000870;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000870:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9553360	9553487	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000870;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000870;transcript_name=HG002_chrY_T0000870;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000870:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9553488	9553599	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000870;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000870;transcript_name=HG002_chrY_T0000870;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000870:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9553600	9553700	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000870;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000870;transcript_name=HG002_chrY_T0000870;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000870:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9553701	9553846	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000870;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000870;transcript_name=HG002_chrY_T0000870;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000870:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9553847	9553941	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000870;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000870;transcript_name=HG002_chrY_T0000870;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000870:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9553942	9554034	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000870;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000870;transcript_name=HG002_chrY_T0000870;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000870:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9554035	9554728	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000870;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000870;transcript_name=HG002_chrY_T0000870;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000870:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9554729	9554946	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000870;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000870;transcript_name=HG002_chrY_T0000870;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000870:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9552406	9554944	1000	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000871;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_G0000275;transcript_name=HG002_chrY_T0000871;gene_name=ENSG00000293749;ID=HG002_chrY_T0000871;Name=ENSG00000293749
HG002_chrY	CAT	exon	9552406	9552674	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000871;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000871;transcript_name=HG002_chrY_T0000871;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000871:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9552675	9553281	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000871;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000871;transcript_name=HG002_chrY_T0000871;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000871:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9553282	9553359	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000871;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000871;transcript_name=HG002_chrY_T0000871;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000871:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9553360	9553487	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000871;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000871;transcript_name=HG002_chrY_T0000871;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000871:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9553488	9553599	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000871;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000871;transcript_name=HG002_chrY_T0000871;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000871:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9553600	9553700	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000871;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000871;transcript_name=HG002_chrY_T0000871;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000871:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9553701	9553846	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000871;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000871;transcript_name=HG002_chrY_T0000871;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000871:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9553847	9553952	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000871;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000871;transcript_name=HG002_chrY_T0000871;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000871:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9553953	9554034	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000871;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000871;transcript_name=HG002_chrY_T0000871;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000871:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9554035	9554728	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000871;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000871;transcript_name=HG002_chrY_T0000871;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000871:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9554729	9554944	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000871;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000871;transcript_name=HG002_chrY_T0000871;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000871:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9552502	9554939	1000	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000872;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_G0000275;transcript_name=HG002_chrY_T0000872;gene_name=ENSG00000293749;ID=HG002_chrY_T0000872;Name=ENSG00000293749
HG002_chrY	CAT	exon	9552502	9552674	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000872;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000872;transcript_name=HG002_chrY_T0000872;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000872:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9552675	9553281	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000872;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000872;transcript_name=HG002_chrY_T0000872;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000872:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9553282	9553359	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000872;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000872;transcript_name=HG002_chrY_T0000872;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000872:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9553360	9553487	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000872;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000872;transcript_name=HG002_chrY_T0000872;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000872:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9553488	9553599	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000872;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000872;transcript_name=HG002_chrY_T0000872;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000872:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9553600	9553707	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000872;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000872;transcript_name=HG002_chrY_T0000872;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000872:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9553708	9553846	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000872;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000872;transcript_name=HG002_chrY_T0000872;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000872:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9553847	9553952	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000872;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000872;transcript_name=HG002_chrY_T0000872;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000872:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9553953	9554034	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000872;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000872;transcript_name=HG002_chrY_T0000872;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000872:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9554035	9554728	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000872;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000872;transcript_name=HG002_chrY_T0000872;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000872:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9554729	9554939	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000872;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000872;transcript_name=HG002_chrY_T0000872;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000872:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9552628	9554950	1000	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000873;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_G0000275;transcript_name=HG002_chrY_T0000873;gene_name=ENSG00000293749;ID=HG002_chrY_T0000873;Name=ENSG00000293749
HG002_chrY	CAT	exon	9552628	9552730	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000873;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000873;transcript_name=HG002_chrY_T0000873;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000873:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9552731	9553299	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000873;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000873;transcript_name=HG002_chrY_T0000873;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000873:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9553300	9553359	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000873;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000873;transcript_name=HG002_chrY_T0000873;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000873:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9553360	9553487	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000873;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000873;transcript_name=HG002_chrY_T0000873;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000873:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9553488	9553599	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000873;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000873;transcript_name=HG002_chrY_T0000873;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000873:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9553600	9553700	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000873;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000873;transcript_name=HG002_chrY_T0000873;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000873:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9553701	9553846	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000873;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000873;transcript_name=HG002_chrY_T0000873;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000873:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9553847	9553952	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000873;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000873;transcript_name=HG002_chrY_T0000873;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000873:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9553953	9554034	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000873;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000873;transcript_name=HG002_chrY_T0000873;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000873:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9554035	9554728	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000873;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000873;transcript_name=HG002_chrY_T0000873;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000873:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9554729	9554950	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000873;gene_id=HG002_chrY_G0000275;Parent=HG002_chrY_T0000873;transcript_name=HG002_chrY_T0000873;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000873:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9552189	9554751	.	+	.	source_gene_common_name=TSPY6P;source_gene=ENSG00000270073.1_2;gene_id=HG002_chrY_G0000276;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY6P;gene_sources=liftoff;ID=HG002_chrY_G0000276;Name=TSPY6P
HG002_chrY	CAT	transcript	9552189	9554751	1000	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000868;gene_id=HG002_chrY_G0000276;Parent=HG002_chrY_G0000276;transcript_name=HG002_chrY_T0000868;gene_name=TSPY6P;ID=HG002_chrY_T0000868;Name=TSPY6P
HG002_chrY	CAT	exon	9552189	9552399	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000868;gene_id=HG002_chrY_G0000276;Parent=HG002_chrY_T0000868;transcript_name=HG002_chrY_T0000868;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000868:0;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9552400	9552407	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000868;gene_id=HG002_chrY_G0000276;Parent=HG002_chrY_T0000868;transcript_name=HG002_chrY_T0000868;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000868:0;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9552408	9552674	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000868;gene_id=HG002_chrY_G0000276;Parent=HG002_chrY_T0000868;transcript_name=HG002_chrY_T0000868;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000868:1;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9552675	9553281	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000868;gene_id=HG002_chrY_G0000276;Parent=HG002_chrY_T0000868;transcript_name=HG002_chrY_T0000868;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000868:1;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9553282	9553359	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000868;gene_id=HG002_chrY_G0000276;Parent=HG002_chrY_T0000868;transcript_name=HG002_chrY_T0000868;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000868:2;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9553360	9553487	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000868;gene_id=HG002_chrY_G0000276;Parent=HG002_chrY_T0000868;transcript_name=HG002_chrY_T0000868;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000868:2;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9553488	9553599	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000868;gene_id=HG002_chrY_G0000276;Parent=HG002_chrY_T0000868;transcript_name=HG002_chrY_T0000868;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000868:3;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9553600	9553700	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000868;gene_id=HG002_chrY_G0000276;Parent=HG002_chrY_T0000868;transcript_name=HG002_chrY_T0000868;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000868:3;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9553701	9553846	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000868;gene_id=HG002_chrY_G0000276;Parent=HG002_chrY_T0000868;transcript_name=HG002_chrY_T0000868;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000868:4;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9553847	9553952	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000868;gene_id=HG002_chrY_G0000276;Parent=HG002_chrY_T0000868;transcript_name=HG002_chrY_T0000868;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000868:4;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9553953	9554034	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000868;gene_id=HG002_chrY_G0000276;Parent=HG002_chrY_T0000868;transcript_name=HG002_chrY_T0000868;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000868:5;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9554035	9554728	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000868;gene_id=HG002_chrY_G0000276;Parent=HG002_chrY_T0000868;transcript_name=HG002_chrY_T0000868;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000868:5;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9554729	9554751	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000868;gene_id=HG002_chrY_G0000276;Parent=HG002_chrY_T0000868;transcript_name=HG002_chrY_T0000868;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000868:6;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9553329	9554946	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1;gene_id=HG002_chrY_G0000277;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=HG002_chrY_G0000277;Name=ENSG00000293749
HG002_chrY	CAT	transcript	9553329	9554937	1000	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000874;gene_id=HG002_chrY_G0000277;Parent=HG002_chrY_G0000277;transcript_name=HG002_chrY_T0000874;gene_name=ENSG00000293749;ID=HG002_chrY_T0000874;Name=ENSG00000293749
HG002_chrY	CAT	exon	9553329	9553359	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000874;gene_id=HG002_chrY_G0000277;Parent=HG002_chrY_T0000874;transcript_name=HG002_chrY_T0000874;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000874:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9553360	9553487	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000874;gene_id=HG002_chrY_G0000277;Parent=HG002_chrY_T0000874;transcript_name=HG002_chrY_T0000874;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000874:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9553488	9553846	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000874;gene_id=HG002_chrY_G0000277;Parent=HG002_chrY_T0000874;transcript_name=HG002_chrY_T0000874;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000874:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9553847	9553952	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000874;gene_id=HG002_chrY_G0000277;Parent=HG002_chrY_T0000874;transcript_name=HG002_chrY_T0000874;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000874:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9553953	9554034	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000874;gene_id=HG002_chrY_G0000277;Parent=HG002_chrY_T0000874;transcript_name=HG002_chrY_T0000874;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000874:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9554035	9554728	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000874;gene_id=HG002_chrY_G0000277;Parent=HG002_chrY_T0000874;transcript_name=HG002_chrY_T0000874;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000874:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9554729	9554937	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000874;gene_id=HG002_chrY_G0000277;Parent=HG002_chrY_T0000874;transcript_name=HG002_chrY_T0000874;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000874:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9553874	9554946	1000	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000875;gene_id=HG002_chrY_G0000277;Parent=HG002_chrY_G0000277;transcript_name=HG002_chrY_T0000875;gene_name=ENSG00000293749;ID=HG002_chrY_T0000875;Name=ENSG00000293749
HG002_chrY	CAT	exon	9553874	9554034	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000875;gene_id=HG002_chrY_G0000277;Parent=HG002_chrY_T0000875;transcript_name=HG002_chrY_T0000875;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000875:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9554035	9554728	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000875;gene_id=HG002_chrY_G0000277;Parent=HG002_chrY_T0000875;transcript_name=HG002_chrY_T0000875;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000875:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9554729	9554946	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000875;gene_id=HG002_chrY_G0000277;Parent=HG002_chrY_T0000875;transcript_name=HG002_chrY_T0000875;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000875:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9562172	9569847	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1_2;gene_id=HG002_chrY_G0000278;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG002_chrY_G0000278;Name=FAM197Y9
HG002_chrY	CAT	transcript	9562172	9569847	1000	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000876;gene_id=HG002_chrY_G0000278;Parent=HG002_chrY_G0000278;transcript_name=HG002_chrY_T0000876;gene_name=FAM197Y9;ID=HG002_chrY_T0000876;Name=FAM197Y9
HG002_chrY	CAT	exon	9562172	9564285	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000876;gene_id=HG002_chrY_G0000278;Parent=HG002_chrY_T0000876;transcript_name=HG002_chrY_T0000876;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000876:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9564286	9567834	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000876;gene_id=HG002_chrY_G0000278;Parent=HG002_chrY_T0000876;transcript_name=HG002_chrY_T0000876;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000876:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9567835	9567920	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000876;gene_id=HG002_chrY_G0000278;Parent=HG002_chrY_T0000876;transcript_name=HG002_chrY_T0000876;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000876:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9567921	9569727	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000876;gene_id=HG002_chrY_G0000278;Parent=HG002_chrY_T0000876;transcript_name=HG002_chrY_T0000876;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000876:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9569728	9569847	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000876;gene_id=HG002_chrY_G0000278;Parent=HG002_chrY_T0000876;transcript_name=HG002_chrY_T0000876;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000876:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9564226	9569829	1000	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000877;gene_id=HG002_chrY_G0000278;Parent=HG002_chrY_G0000278;transcript_name=HG002_chrY_T0000877;gene_name=FAM197Y9;ID=HG002_chrY_T0000877;Name=FAM197Y9
HG002_chrY	CAT	exon	9564226	9564285	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000877;gene_id=HG002_chrY_G0000278;Parent=HG002_chrY_T0000877;transcript_name=HG002_chrY_T0000877;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000877:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9564286	9567834	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000877;gene_id=HG002_chrY_G0000278;Parent=HG002_chrY_T0000877;transcript_name=HG002_chrY_T0000877;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000877:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9567835	9567993	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000877;gene_id=HG002_chrY_G0000278;Parent=HG002_chrY_T0000877;transcript_name=HG002_chrY_T0000877;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000877:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9567994	9569495	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000877;gene_id=HG002_chrY_G0000278;Parent=HG002_chrY_T0000877;transcript_name=HG002_chrY_T0000877;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000877:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9569496	9569641	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000877;gene_id=HG002_chrY_G0000278;Parent=HG002_chrY_T0000877;transcript_name=HG002_chrY_T0000877;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000877:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9569642	9569727	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000877;gene_id=HG002_chrY_G0000278;Parent=HG002_chrY_T0000877;transcript_name=HG002_chrY_T0000877;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000877:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9569728	9569829	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000877;gene_id=HG002_chrY_G0000278;Parent=HG002_chrY_T0000877;transcript_name=HG002_chrY_T0000877;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000877:3;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9569496	9571489	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9_7;gene_id=HG002_chrY_G0000279;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG002_chrY_G0000279;Name=FAM197Y9
HG002_chrY	CAT	transcript	9569496	9571489	1000	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000878;gene_id=HG002_chrY_G0000279;Parent=HG002_chrY_G0000279;transcript_name=HG002_chrY_T0000878;gene_name=FAM197Y9;ID=HG002_chrY_T0000878;Name=FAM197Y9
HG002_chrY	CAT	exon	9569496	9569641	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000878;gene_id=HG002_chrY_G0000279;Parent=HG002_chrY_T0000878;transcript_name=HG002_chrY_T0000878;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000878:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9569642	9569753	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000878;gene_id=HG002_chrY_G0000279;Parent=HG002_chrY_T0000878;transcript_name=HG002_chrY_T0000878;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000878:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9569754	9569837	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000878;gene_id=HG002_chrY_G0000279;Parent=HG002_chrY_T0000878;transcript_name=HG002_chrY_T0000878;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000878:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9569838	9571179	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000878;gene_id=HG002_chrY_G0000279;Parent=HG002_chrY_T0000878;transcript_name=HG002_chrY_T0000878;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0000878:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9571180	9571489	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0000878;gene_id=HG002_chrY_G0000279;Parent=HG002_chrY_T0000878;transcript_name=HG002_chrY_T0000878;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0000878:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9572442	9575238	.	+	.	source_gene_common_name=TSPY10;source_gene=ENSG00000236424.7;gene_id=HG002_chrY_G0000280;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG002_chrY_G0000280;Name=TSPY10
HG002_chrY	CAT	transcript	9572442	9575238	100	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000879;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_G0000280;transcript_name=HG002_chrY_T0000879;gene_name=TSPY10;ID=HG002_chrY_T0000879;Name=TSPY10
HG002_chrY	CAT	exon	9572442	9572973	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000879;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000879;transcript_name=HG002_chrY_T0000879;gene_name=TSPY10;ID=exon:HG002_chrY_T0000879:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9572488	9572973	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000879;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000879;transcript_name=HG002_chrY_T0000879;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000879:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9572488	9572490	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000879;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000879;transcript_name=HG002_chrY_T0000879;gene_name=TSPY10;ID=start_codon:HG002_chrY_T0000879;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9572974	9573580	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000879;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000879;transcript_name=HG002_chrY_T0000879;gene_name=TSPY10;ID=intron:HG002_chrY_T0000879:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9573581	9573658	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000879;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000879;transcript_name=HG002_chrY_T0000879;gene_name=TSPY10;ID=exon:HG002_chrY_T0000879:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9573581	9573658	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000879;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000879;transcript_name=HG002_chrY_T0000879;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000879:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9573659	9573786	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000879;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000879;transcript_name=HG002_chrY_T0000879;gene_name=TSPY10;ID=intron:HG002_chrY_T0000879:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9573787	9573898	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000879;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000879;transcript_name=HG002_chrY_T0000879;gene_name=TSPY10;ID=exon:HG002_chrY_T0000879:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9573787	9573898	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000879;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000879;transcript_name=HG002_chrY_T0000879;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000879:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9573899	9573999	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000879;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000879;transcript_name=HG002_chrY_T0000879;gene_name=TSPY10;ID=intron:HG002_chrY_T0000879:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9574000	9574145	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000879;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000879;transcript_name=HG002_chrY_T0000879;gene_name=TSPY10;ID=exon:HG002_chrY_T0000879:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9574000	9574145	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000879;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000879;transcript_name=HG002_chrY_T0000879;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000879:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9574146	9574251	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000879;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000879;transcript_name=HG002_chrY_T0000879;gene_name=TSPY10;ID=intron:HG002_chrY_T0000879:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9574252	9574333	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000879;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000879;transcript_name=HG002_chrY_T0000879;gene_name=TSPY10;ID=exon:HG002_chrY_T0000879:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9574252	9574333	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000879;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000879;transcript_name=HG002_chrY_T0000879;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000879:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9574334	9575027	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000879;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000879;transcript_name=HG002_chrY_T0000879;gene_name=TSPY10;ID=intron:HG002_chrY_T0000879:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9575028	9575238	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000879;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000879;transcript_name=HG002_chrY_T0000879;gene_name=TSPY10;ID=exon:HG002_chrY_T0000879:5;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9575028	9575050	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000879;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000879;transcript_name=HG002_chrY_T0000879;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000879:5;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9575048	9575050	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000879;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000879;transcript_name=HG002_chrY_T0000879;gene_name=TSPY10;ID=stop_codon:HG002_chrY_T0000879;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9572488	9575237	100	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000880;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_G0000280;transcript_name=HG002_chrY_T0000880;gene_name=TSPY10;ID=HG002_chrY_T0000880;Name=TSPY10
HG002_chrY	CAT	exon	9572488	9572973	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000880;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000880;transcript_name=HG002_chrY_T0000880;gene_name=TSPY10;ID=exon:HG002_chrY_T0000880:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9572488	9572973	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000880;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000880;transcript_name=HG002_chrY_T0000880;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000880:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9572488	9572490	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000880;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000880;transcript_name=HG002_chrY_T0000880;gene_name=TSPY10;ID=start_codon:HG002_chrY_T0000880;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9572974	9573580	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000880;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000880;transcript_name=HG002_chrY_T0000880;gene_name=TSPY10;ID=intron:HG002_chrY_T0000880:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9573581	9573658	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000880;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000880;transcript_name=HG002_chrY_T0000880;gene_name=TSPY10;ID=exon:HG002_chrY_T0000880:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9573581	9573658	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000880;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000880;transcript_name=HG002_chrY_T0000880;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000880:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9573659	9573786	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000880;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000880;transcript_name=HG002_chrY_T0000880;gene_name=TSPY10;ID=intron:HG002_chrY_T0000880:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9573787	9573898	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000880;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000880;transcript_name=HG002_chrY_T0000880;gene_name=TSPY10;ID=exon:HG002_chrY_T0000880:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9573787	9573898	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000880;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000880;transcript_name=HG002_chrY_T0000880;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000880:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9573899	9573999	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000880;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000880;transcript_name=HG002_chrY_T0000880;gene_name=TSPY10;ID=intron:HG002_chrY_T0000880:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9574000	9574145	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000880;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000880;transcript_name=HG002_chrY_T0000880;gene_name=TSPY10;ID=exon:HG002_chrY_T0000880:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9574000	9574145	.	+	2	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000880;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000880;transcript_name=HG002_chrY_T0000880;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000880:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9574146	9574240	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000880;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000880;transcript_name=HG002_chrY_T0000880;gene_name=TSPY10;ID=intron:HG002_chrY_T0000880:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9574241	9574333	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000880;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000880;transcript_name=HG002_chrY_T0000880;gene_name=TSPY10;ID=exon:HG002_chrY_T0000880:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9574241	9574303	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000880;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000880;transcript_name=HG002_chrY_T0000880;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000880:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9574301	9574303	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000880;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000880;transcript_name=HG002_chrY_T0000880;gene_name=TSPY10;ID=stop_codon:HG002_chrY_T0000880;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9574334	9575027	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000880;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000880;transcript_name=HG002_chrY_T0000880;gene_name=TSPY10;ID=intron:HG002_chrY_T0000880:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9575028	9575237	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000880;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000880;transcript_name=HG002_chrY_T0000880;gene_name=TSPY10;ID=exon:HG002_chrY_T0000880:5;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9572488	9575244	1000	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000881;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_G0000280;transcript_name=HG002_chrY_T0000881;gene_name=TSPY10;ID=HG002_chrY_T0000881;Name=TSPY10
HG002_chrY	CAT	exon	9572488	9572973	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000881;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000881;transcript_name=HG002_chrY_T0000881;gene_name=TSPY10;ID=exon:HG002_chrY_T0000881:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9572974	9573580	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000881;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000881;transcript_name=HG002_chrY_T0000881;gene_name=TSPY10;ID=intron:HG002_chrY_T0000881:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9573581	9573658	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000881;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000881;transcript_name=HG002_chrY_T0000881;gene_name=TSPY10;ID=exon:HG002_chrY_T0000881:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9573659	9573786	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000881;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000881;transcript_name=HG002_chrY_T0000881;gene_name=TSPY10;ID=intron:HG002_chrY_T0000881:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9573787	9574333	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000881;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000881;transcript_name=HG002_chrY_T0000881;gene_name=TSPY10;ID=exon:HG002_chrY_T0000881:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9574334	9574460	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000881;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000881;transcript_name=HG002_chrY_T0000881;gene_name=TSPY10;ID=intron:HG002_chrY_T0000881:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9574461	9575244	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000881;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000881;transcript_name=HG002_chrY_T0000881;gene_name=TSPY10;ID=exon:HG002_chrY_T0000881:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9573848	9575229	1000	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000882;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_G0000280;transcript_name=HG002_chrY_T0000882;gene_name=TSPY10;ID=HG002_chrY_T0000882;Name=TSPY10
HG002_chrY	CAT	exon	9573848	9574145	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000882;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000882;transcript_name=HG002_chrY_T0000882;gene_name=TSPY10;ID=exon:HG002_chrY_T0000882:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9574146	9574251	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000882;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000882;transcript_name=HG002_chrY_T0000882;gene_name=TSPY10;ID=intron:HG002_chrY_T0000882:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9574252	9574333	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000882;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000882;transcript_name=HG002_chrY_T0000882;gene_name=TSPY10;ID=exon:HG002_chrY_T0000882:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9574334	9575027	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000882;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000882;transcript_name=HG002_chrY_T0000882;gene_name=TSPY10;ID=intron:HG002_chrY_T0000882:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9575028	9575229	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000882;gene_id=HG002_chrY_G0000280;Parent=HG002_chrY_T0000882;transcript_name=HG002_chrY_T0000882;gene_name=TSPY10;ID=exon:HG002_chrY_T0000882:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9584401	9590147	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=HG002_chrY_G0000281;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000281;Name=FAM197Y5
HG002_chrY	CAT	transcript	9584401	9590147	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000883;gene_id=HG002_chrY_G0000281;Parent=HG002_chrY_G0000281;transcript_name=HG002_chrY_T0000883;gene_name=FAM197Y5;ID=HG002_chrY_T0000883;Name=FAM197Y5
HG002_chrY	CAT	exon	9584401	9584590	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000883;gene_id=HG002_chrY_G0000281;Parent=HG002_chrY_T0000883;transcript_name=HG002_chrY_T0000883;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000883:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9584591	9588140	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000883;gene_id=HG002_chrY_G0000281;Parent=HG002_chrY_T0000883;transcript_name=HG002_chrY_T0000883;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000883:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9588141	9588226	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000883;gene_id=HG002_chrY_G0000281;Parent=HG002_chrY_T0000883;transcript_name=HG002_chrY_T0000883;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000883:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9588227	9590033	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000883;gene_id=HG002_chrY_G0000281;Parent=HG002_chrY_T0000883;transcript_name=HG002_chrY_T0000883;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000883:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9590034	9590147	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000883;gene_id=HG002_chrY_G0000281;Parent=HG002_chrY_T0000883;transcript_name=HG002_chrY_T0000883;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000883:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9584531	9590135	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000884;gene_id=HG002_chrY_G0000281;Parent=HG002_chrY_G0000281;transcript_name=HG002_chrY_T0000884;gene_name=FAM197Y5;ID=HG002_chrY_T0000884;Name=FAM197Y5
HG002_chrY	CAT	exon	9584531	9584590	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000884;gene_id=HG002_chrY_G0000281;Parent=HG002_chrY_T0000884;transcript_name=HG002_chrY_T0000884;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000884:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9584591	9588140	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000884;gene_id=HG002_chrY_G0000281;Parent=HG002_chrY_T0000884;transcript_name=HG002_chrY_T0000884;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000884:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9588141	9588299	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000884;gene_id=HG002_chrY_G0000281;Parent=HG002_chrY_T0000884;transcript_name=HG002_chrY_T0000884;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000884:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9588300	9589801	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000884;gene_id=HG002_chrY_G0000281;Parent=HG002_chrY_T0000884;transcript_name=HG002_chrY_T0000884;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000884:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9589802	9589947	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000884;gene_id=HG002_chrY_G0000281;Parent=HG002_chrY_T0000884;transcript_name=HG002_chrY_T0000884;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000884:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9589948	9590033	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000884;gene_id=HG002_chrY_G0000281;Parent=HG002_chrY_T0000884;transcript_name=HG002_chrY_T0000884;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000884:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9590034	9590135	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000884;gene_id=HG002_chrY_G0000281;Parent=HG002_chrY_T0000884;transcript_name=HG002_chrY_T0000884;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000884:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9589802	9591794	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_16;gene_id=HG002_chrY_G0000282;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000282;Name=FAM197Y5
HG002_chrY	CAT	transcript	9589802	9591794	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_16;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_16;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000885;gene_id=HG002_chrY_G0000282;Parent=HG002_chrY_G0000282;transcript_name=HG002_chrY_T0000885;gene_name=FAM197Y5;ID=HG002_chrY_T0000885;Name=FAM197Y5
HG002_chrY	CAT	exon	9589802	9589947	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_16;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_16;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000885;gene_id=HG002_chrY_G0000282;Parent=HG002_chrY_T0000885;transcript_name=HG002_chrY_T0000885;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000885:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9589948	9591483	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_16;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_16;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000885;gene_id=HG002_chrY_G0000282;Parent=HG002_chrY_T0000885;transcript_name=HG002_chrY_T0000885;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000885:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9591484	9591794	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_16;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_16;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000885;gene_id=HG002_chrY_G0000282;Parent=HG002_chrY_T0000885;transcript_name=HG002_chrY_T0000885;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000885:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9592748	9595562	.	+	.	source_gene_common_name=TSPY4;source_gene=ENSG00000233803.9;gene_id=HG002_chrY_G0000283;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG002_chrY_G0000283;Name=TSPY4
HG002_chrY	CAT	transcript	9592748	9595562	100	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000886;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_G0000283;transcript_name=HG002_chrY_T0000886;gene_name=TSPY4;ID=HG002_chrY_T0000886;Name=TSPY4
HG002_chrY	CAT	exon	9592748	9593297	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000886;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000886;transcript_name=HG002_chrY_T0000886;gene_name=TSPY4;ID=exon:HG002_chrY_T0000886:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9592794	9593297	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000886;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000886;transcript_name=HG002_chrY_T0000886;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000886:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9592794	9592796	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000886;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000886;transcript_name=HG002_chrY_T0000886;gene_name=TSPY4;ID=start_codon:HG002_chrY_T0000886;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9593298	9593904	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000886;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000886;transcript_name=HG002_chrY_T0000886;gene_name=TSPY4;ID=intron:HG002_chrY_T0000886:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9593905	9593982	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000886;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000886;transcript_name=HG002_chrY_T0000886;gene_name=TSPY4;ID=exon:HG002_chrY_T0000886:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9593905	9593982	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000886;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000886;transcript_name=HG002_chrY_T0000886;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000886:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9593983	9594110	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000886;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000886;transcript_name=HG002_chrY_T0000886;gene_name=TSPY4;ID=intron:HG002_chrY_T0000886:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9594111	9594222	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000886;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000886;transcript_name=HG002_chrY_T0000886;gene_name=TSPY4;ID=exon:HG002_chrY_T0000886:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9594111	9594222	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000886;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000886;transcript_name=HG002_chrY_T0000886;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000886:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9594223	9594323	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000886;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000886;transcript_name=HG002_chrY_T0000886;gene_name=TSPY4;ID=intron:HG002_chrY_T0000886:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9594324	9594469	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000886;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000886;transcript_name=HG002_chrY_T0000886;gene_name=TSPY4;ID=exon:HG002_chrY_T0000886:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9594324	9594469	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000886;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000886;transcript_name=HG002_chrY_T0000886;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000886:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9594470	9594575	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000886;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000886;transcript_name=HG002_chrY_T0000886;gene_name=TSPY4;ID=intron:HG002_chrY_T0000886:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9594576	9594657	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000886;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000886;transcript_name=HG002_chrY_T0000886;gene_name=TSPY4;ID=exon:HG002_chrY_T0000886:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9594576	9594657	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000886;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000886;transcript_name=HG002_chrY_T0000886;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000886:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9594658	9595351	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000886;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000886;transcript_name=HG002_chrY_T0000886;gene_name=TSPY4;ID=intron:HG002_chrY_T0000886:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9595352	9595562	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000886;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000886;transcript_name=HG002_chrY_T0000886;gene_name=TSPY4;ID=exon:HG002_chrY_T0000886:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9595352	9595374	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000886;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000886;transcript_name=HG002_chrY_T0000886;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000886:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9595372	9595374	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000886;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000886;transcript_name=HG002_chrY_T0000886;gene_name=TSPY4;ID=stop_codon:HG002_chrY_T0000886;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9592748	9595441	100	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000887;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_G0000283;transcript_name=HG002_chrY_T0000887;gene_name=TSPY4;ID=HG002_chrY_T0000887;Name=TSPY4
HG002_chrY	CAT	exon	9592748	9592880	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000887;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000887;transcript_name=HG002_chrY_T0000887;gene_name=TSPY4;ID=exon:HG002_chrY_T0000887:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9592794	9592880	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000887;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000887;transcript_name=HG002_chrY_T0000887;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000887:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9592794	9592796	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000887;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000887;transcript_name=HG002_chrY_T0000887;gene_name=TSPY4;ID=start_codon:HG002_chrY_T0000887;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9592881	9593159	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000887;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000887;transcript_name=HG002_chrY_T0000887;gene_name=TSPY4;ID=intron:HG002_chrY_T0000887:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9593160	9593297	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000887;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000887;transcript_name=HG002_chrY_T0000887;gene_name=TSPY4;ID=exon:HG002_chrY_T0000887:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9593160	9593297	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000887;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000887;transcript_name=HG002_chrY_T0000887;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000887:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9593298	9593904	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000887;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000887;transcript_name=HG002_chrY_T0000887;gene_name=TSPY4;ID=intron:HG002_chrY_T0000887:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9593905	9593982	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000887;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000887;transcript_name=HG002_chrY_T0000887;gene_name=TSPY4;ID=exon:HG002_chrY_T0000887:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9593905	9593982	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000887;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000887;transcript_name=HG002_chrY_T0000887;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000887:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9593983	9594110	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000887;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000887;transcript_name=HG002_chrY_T0000887;gene_name=TSPY4;ID=intron:HG002_chrY_T0000887:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9594111	9594222	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000887;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000887;transcript_name=HG002_chrY_T0000887;gene_name=TSPY4;ID=exon:HG002_chrY_T0000887:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9594111	9594222	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000887;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000887;transcript_name=HG002_chrY_T0000887;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000887:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9594223	9594323	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000887;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000887;transcript_name=HG002_chrY_T0000887;gene_name=TSPY4;ID=intron:HG002_chrY_T0000887:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9594324	9594469	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000887;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000887;transcript_name=HG002_chrY_T0000887;gene_name=TSPY4;ID=exon:HG002_chrY_T0000887:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9594324	9594469	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000887;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000887;transcript_name=HG002_chrY_T0000887;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000887:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9594470	9594575	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000887;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000887;transcript_name=HG002_chrY_T0000887;gene_name=TSPY4;ID=intron:HG002_chrY_T0000887:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9594576	9594657	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000887;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000887;transcript_name=HG002_chrY_T0000887;gene_name=TSPY4;ID=exon:HG002_chrY_T0000887:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9594576	9594657	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000887;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000887;transcript_name=HG002_chrY_T0000887;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000887:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9594658	9595351	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000887;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000887;transcript_name=HG002_chrY_T0000887;gene_name=TSPY4;ID=intron:HG002_chrY_T0000887:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9595352	9595441	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000887;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000887;transcript_name=HG002_chrY_T0000887;gene_name=TSPY4;ID=exon:HG002_chrY_T0000887:6;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9595352	9595374	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000887;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000887;transcript_name=HG002_chrY_T0000887;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000887:6;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9595372	9595374	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000887;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000887;transcript_name=HG002_chrY_T0000887;gene_name=TSPY4;ID=stop_codon:HG002_chrY_T0000887;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9592794	9595561	100	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000888;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_G0000283;transcript_name=HG002_chrY_T0000888;gene_name=TSPY4;ID=HG002_chrY_T0000888;Name=TSPY4
HG002_chrY	CAT	exon	9592794	9593297	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000888;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000888;transcript_name=HG002_chrY_T0000888;gene_name=TSPY4;ID=exon:HG002_chrY_T0000888:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9592794	9593297	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000888;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000888;transcript_name=HG002_chrY_T0000888;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000888:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9592794	9592796	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000888;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000888;transcript_name=HG002_chrY_T0000888;gene_name=TSPY4;ID=start_codon:HG002_chrY_T0000888;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9593298	9593904	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000888;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000888;transcript_name=HG002_chrY_T0000888;gene_name=TSPY4;ID=intron:HG002_chrY_T0000888:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9593905	9593982	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000888;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000888;transcript_name=HG002_chrY_T0000888;gene_name=TSPY4;ID=exon:HG002_chrY_T0000888:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9593905	9593982	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000888;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000888;transcript_name=HG002_chrY_T0000888;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000888:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9593983	9594110	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000888;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000888;transcript_name=HG002_chrY_T0000888;gene_name=TSPY4;ID=intron:HG002_chrY_T0000888:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9594111	9594222	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000888;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000888;transcript_name=HG002_chrY_T0000888;gene_name=TSPY4;ID=exon:HG002_chrY_T0000888:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9594111	9594222	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000888;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000888;transcript_name=HG002_chrY_T0000888;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000888:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9594223	9594323	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000888;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000888;transcript_name=HG002_chrY_T0000888;gene_name=TSPY4;ID=intron:HG002_chrY_T0000888:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9594324	9594469	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000888;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000888;transcript_name=HG002_chrY_T0000888;gene_name=TSPY4;ID=exon:HG002_chrY_T0000888:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9594324	9594469	.	+	2	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000888;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000888;transcript_name=HG002_chrY_T0000888;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000888:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9594470	9594564	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000888;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000888;transcript_name=HG002_chrY_T0000888;gene_name=TSPY4;ID=intron:HG002_chrY_T0000888:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9594565	9594657	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000888;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000888;transcript_name=HG002_chrY_T0000888;gene_name=TSPY4;ID=exon:HG002_chrY_T0000888:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9594565	9594627	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000888;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000888;transcript_name=HG002_chrY_T0000888;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000888:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9594625	9594627	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000888;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000888;transcript_name=HG002_chrY_T0000888;gene_name=TSPY4;ID=stop_codon:HG002_chrY_T0000888;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9594658	9595351	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000888;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000888;transcript_name=HG002_chrY_T0000888;gene_name=TSPY4;ID=intron:HG002_chrY_T0000888:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9595352	9595561	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000888;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000888;transcript_name=HG002_chrY_T0000888;gene_name=TSPY4;ID=exon:HG002_chrY_T0000888:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9592794	9595568	1000	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000889;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_G0000283;transcript_name=HG002_chrY_T0000889;gene_name=TSPY4;ID=HG002_chrY_T0000889;Name=TSPY4
HG002_chrY	CAT	exon	9592794	9593297	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000889;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000889;transcript_name=HG002_chrY_T0000889;gene_name=TSPY4;ID=exon:HG002_chrY_T0000889:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9593298	9593904	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000889;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000889;transcript_name=HG002_chrY_T0000889;gene_name=TSPY4;ID=intron:HG002_chrY_T0000889:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9593905	9593982	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000889;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000889;transcript_name=HG002_chrY_T0000889;gene_name=TSPY4;ID=exon:HG002_chrY_T0000889:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9593983	9594110	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000889;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000889;transcript_name=HG002_chrY_T0000889;gene_name=TSPY4;ID=intron:HG002_chrY_T0000889:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9594111	9594657	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000889;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000889;transcript_name=HG002_chrY_T0000889;gene_name=TSPY4;ID=exon:HG002_chrY_T0000889:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9594658	9594784	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000889;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000889;transcript_name=HG002_chrY_T0000889;gene_name=TSPY4;ID=intron:HG002_chrY_T0000889:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9594785	9595568	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000889;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000889;transcript_name=HG002_chrY_T0000889;gene_name=TSPY4;ID=exon:HG002_chrY_T0000889:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9594172	9595553	1000	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000890;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_G0000283;transcript_name=HG002_chrY_T0000890;gene_name=TSPY4;ID=HG002_chrY_T0000890;Name=TSPY4
HG002_chrY	CAT	exon	9594172	9594469	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000890;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000890;transcript_name=HG002_chrY_T0000890;gene_name=TSPY4;ID=exon:HG002_chrY_T0000890:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9594470	9594564	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000890;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000890;transcript_name=HG002_chrY_T0000890;gene_name=TSPY4;ID=intron:HG002_chrY_T0000890:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9594565	9594657	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000890;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000890;transcript_name=HG002_chrY_T0000890;gene_name=TSPY4;ID=exon:HG002_chrY_T0000890:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9594658	9595351	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000890;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000890;transcript_name=HG002_chrY_T0000890;gene_name=TSPY4;ID=intron:HG002_chrY_T0000890:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9595352	9595553	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000890;gene_id=HG002_chrY_G0000283;Parent=HG002_chrY_T0000890;transcript_name=HG002_chrY_T0000890;gene_name=TSPY4;ID=exon:HG002_chrY_T0000890:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9602764	9610662	.	-	.	source_gene_common_name=FAM197Y6;source_gene=ENSG00000237802.7_1;gene_id=HG002_chrY_G0000284;gene_biotype=lncRNA;gene_name=FAM197Y6;gene_sources=liftoff;ID=HG002_chrY_G0000284;Name=FAM197Y6
HG002_chrY	CAT	transcript	9602764	9610662	1000	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG002_chrY_T0000891;gene_id=HG002_chrY_G0000284;Parent=HG002_chrY_G0000284;transcript_name=HG002_chrY_T0000891;gene_name=FAM197Y6;ID=HG002_chrY_T0000891;Name=FAM197Y6
HG002_chrY	CAT	exon	9602764	9604891	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG002_chrY_T0000891;gene_id=HG002_chrY_G0000284;Parent=HG002_chrY_T0000891;transcript_name=HG002_chrY_T0000891;gene_name=FAM197Y6;ID=exon:HG002_chrY_T0000891:0;Name=FAM197Y6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9604892	9608446	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG002_chrY_T0000891;gene_id=HG002_chrY_G0000284;Parent=HG002_chrY_T0000891;transcript_name=HG002_chrY_T0000891;gene_name=FAM197Y6;ID=intron:HG002_chrY_T0000891:0;Name=FAM197Y6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9608447	9608532	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG002_chrY_T0000891;gene_id=HG002_chrY_G0000284;Parent=HG002_chrY_T0000891;transcript_name=HG002_chrY_T0000891;gene_name=FAM197Y6;ID=exon:HG002_chrY_T0000891:1;Name=FAM197Y6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9608533	9610341	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG002_chrY_T0000891;gene_id=HG002_chrY_G0000284;Parent=HG002_chrY_T0000891;transcript_name=HG002_chrY_T0000891;gene_name=FAM197Y6;ID=intron:HG002_chrY_T0000891:1;Name=FAM197Y6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9610342	9610451	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG002_chrY_T0000891;gene_id=HG002_chrY_G0000284;Parent=HG002_chrY_T0000891;transcript_name=HG002_chrY_T0000891;gene_name=FAM197Y6;ID=exon:HG002_chrY_T0000891:2;Name=FAM197Y6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9610452	9610647	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG002_chrY_T0000891;gene_id=HG002_chrY_G0000284;Parent=HG002_chrY_T0000891;transcript_name=HG002_chrY_T0000891;gene_name=FAM197Y6;ID=intron:HG002_chrY_T0000891:2;Name=FAM197Y6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9610648	9610662	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG002_chrY_T0000891;gene_id=HG002_chrY_G0000284;Parent=HG002_chrY_T0000891;transcript_name=HG002_chrY_T0000891;gene_name=FAM197Y6;ID=exon:HG002_chrY_T0000891:3;Name=FAM197Y6;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9604832	9610443	1000	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG002_chrY_T0000892;gene_id=HG002_chrY_G0000284;Parent=HG002_chrY_G0000284;transcript_name=HG002_chrY_T0000892;gene_name=FAM197Y6;ID=HG002_chrY_T0000892;Name=FAM197Y6
HG002_chrY	CAT	exon	9604832	9604891	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG002_chrY_T0000892;gene_id=HG002_chrY_G0000284;Parent=HG002_chrY_T0000892;transcript_name=HG002_chrY_T0000892;gene_name=FAM197Y6;ID=exon:HG002_chrY_T0000892:0;Name=FAM197Y6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9604892	9608446	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG002_chrY_T0000892;gene_id=HG002_chrY_G0000284;Parent=HG002_chrY_T0000892;transcript_name=HG002_chrY_T0000892;gene_name=FAM197Y6;ID=intron:HG002_chrY_T0000892:0;Name=FAM197Y6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9608447	9608605	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG002_chrY_T0000892;gene_id=HG002_chrY_G0000284;Parent=HG002_chrY_T0000892;transcript_name=HG002_chrY_T0000892;gene_name=FAM197Y6;ID=exon:HG002_chrY_T0000892:1;Name=FAM197Y6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9608606	9610109	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG002_chrY_T0000892;gene_id=HG002_chrY_G0000284;Parent=HG002_chrY_T0000892;transcript_name=HG002_chrY_T0000892;gene_name=FAM197Y6;ID=intron:HG002_chrY_T0000892:1;Name=FAM197Y6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9610110	9610255	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG002_chrY_T0000892;gene_id=HG002_chrY_G0000284;Parent=HG002_chrY_T0000892;transcript_name=HG002_chrY_T0000892;gene_name=FAM197Y6;ID=exon:HG002_chrY_T0000892:2;Name=FAM197Y6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9610256	9610341	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG002_chrY_T0000892;gene_id=HG002_chrY_G0000284;Parent=HG002_chrY_T0000892;transcript_name=HG002_chrY_T0000892;gene_name=FAM197Y6;ID=intron:HG002_chrY_T0000892:2;Name=FAM197Y6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9610342	9610443	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG002_chrY_T0000892;gene_id=HG002_chrY_G0000284;Parent=HG002_chrY_T0000892;transcript_name=HG002_chrY_T0000892;gene_name=FAM197Y6;ID=exon:HG002_chrY_T0000892:3;Name=FAM197Y6;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9610110	9612102	.	-	.	source_gene_common_name=ENSG00000286173;source_gene=ENSG00000286173.1;gene_id=HG002_chrY_G0000285;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000286173;gene_sources=liftoff;ID=HG002_chrY_G0000285;Name=ENSG00000286173
HG002_chrY	CAT	transcript	9610110	9612102	1000	-	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=HG002_chrY_T0000893;gene_id=HG002_chrY_G0000285;Parent=HG002_chrY_G0000285;transcript_name=HG002_chrY_T0000893;gene_name=ENSG00000286173;ID=HG002_chrY_T0000893;Name=ENSG00000286173
HG002_chrY	CAT	exon	9610110	9610255	.	-	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=HG002_chrY_T0000893;gene_id=HG002_chrY_G0000285;Parent=HG002_chrY_T0000893;transcript_name=HG002_chrY_T0000893;gene_name=ENSG00000286173;ID=exon:HG002_chrY_T0000893:0;Name=ENSG00000286173;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9610256	9611791	.	-	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=HG002_chrY_T0000893;gene_id=HG002_chrY_G0000285;Parent=HG002_chrY_T0000893;transcript_name=HG002_chrY_T0000893;gene_name=ENSG00000286173;ID=intron:HG002_chrY_T0000893:0;Name=ENSG00000286173;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9611792	9612102	.	-	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=HG002_chrY_T0000893;gene_id=HG002_chrY_G0000285;Parent=HG002_chrY_T0000893;transcript_name=HG002_chrY_T0000893;gene_name=ENSG00000286173;ID=exon:HG002_chrY_T0000893:1;Name=ENSG00000286173;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9613056	9615853	.	+	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;gene_id=HG002_chrY_G0000286;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=HG002_chrY_G0000286;Name=TSPY3
HG002_chrY	CAT	transcript	9613056	9615853	100	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000894;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_G0000286;transcript_name=HG002_chrY_T0000894;gene_name=TSPY3;ID=HG002_chrY_T0000894;Name=TSPY3
HG002_chrY	CAT	exon	9613056	9613587	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000894;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000894;transcript_name=HG002_chrY_T0000894;gene_name=TSPY3;ID=exon:HG002_chrY_T0000894:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9613102	9613587	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000894;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000894;transcript_name=HG002_chrY_T0000894;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000894:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9613102	9613104	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000894;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000894;transcript_name=HG002_chrY_T0000894;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000894;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9613588	9614194	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000894;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000894;transcript_name=HG002_chrY_T0000894;gene_name=TSPY3;ID=intron:HG002_chrY_T0000894:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9614195	9614272	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000894;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000894;transcript_name=HG002_chrY_T0000894;gene_name=TSPY3;ID=exon:HG002_chrY_T0000894:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9614195	9614272	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000894;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000894;transcript_name=HG002_chrY_T0000894;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000894:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9614273	9614400	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000894;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000894;transcript_name=HG002_chrY_T0000894;gene_name=TSPY3;ID=intron:HG002_chrY_T0000894:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9614401	9614512	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000894;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000894;transcript_name=HG002_chrY_T0000894;gene_name=TSPY3;ID=exon:HG002_chrY_T0000894:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9614401	9614512	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000894;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000894;transcript_name=HG002_chrY_T0000894;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000894:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9614513	9614613	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000894;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000894;transcript_name=HG002_chrY_T0000894;gene_name=TSPY3;ID=intron:HG002_chrY_T0000894:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9614614	9614759	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000894;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000894;transcript_name=HG002_chrY_T0000894;gene_name=TSPY3;ID=exon:HG002_chrY_T0000894:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9614614	9614759	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000894;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000894;transcript_name=HG002_chrY_T0000894;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000894:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9614760	9614865	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000894;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000894;transcript_name=HG002_chrY_T0000894;gene_name=TSPY3;ID=intron:HG002_chrY_T0000894:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9614866	9614947	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000894;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000894;transcript_name=HG002_chrY_T0000894;gene_name=TSPY3;ID=exon:HG002_chrY_T0000894:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9614866	9614947	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000894;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000894;transcript_name=HG002_chrY_T0000894;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000894:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9614948	9615641	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000894;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000894;transcript_name=HG002_chrY_T0000894;gene_name=TSPY3;ID=intron:HG002_chrY_T0000894:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9615642	9615853	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000894;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000894;transcript_name=HG002_chrY_T0000894;gene_name=TSPY3;ID=exon:HG002_chrY_T0000894:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9615642	9615664	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000894;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000894;transcript_name=HG002_chrY_T0000894;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000894:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9615662	9615664	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000894;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000894;transcript_name=HG002_chrY_T0000894;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000894;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9613102	9615852	100	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000895;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_G0000286;transcript_name=HG002_chrY_T0000895;gene_name=TSPY3;ID=HG002_chrY_T0000895;Name=TSPY3
HG002_chrY	CAT	exon	9613102	9613587	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000895;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000895;transcript_name=HG002_chrY_T0000895;gene_name=TSPY3;ID=exon:HG002_chrY_T0000895:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9613102	9613587	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000895;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000895;transcript_name=HG002_chrY_T0000895;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000895:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9613102	9613104	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000895;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000895;transcript_name=HG002_chrY_T0000895;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000895;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9613588	9614194	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000895;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000895;transcript_name=HG002_chrY_T0000895;gene_name=TSPY3;ID=intron:HG002_chrY_T0000895:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9614195	9614272	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000895;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000895;transcript_name=HG002_chrY_T0000895;gene_name=TSPY3;ID=exon:HG002_chrY_T0000895:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9614195	9614272	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000895;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000895;transcript_name=HG002_chrY_T0000895;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000895:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9614273	9614400	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000895;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000895;transcript_name=HG002_chrY_T0000895;gene_name=TSPY3;ID=intron:HG002_chrY_T0000895:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9614401	9614512	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000895;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000895;transcript_name=HG002_chrY_T0000895;gene_name=TSPY3;ID=exon:HG002_chrY_T0000895:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9614401	9614512	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000895;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000895;transcript_name=HG002_chrY_T0000895;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000895:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9614513	9614613	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000895;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000895;transcript_name=HG002_chrY_T0000895;gene_name=TSPY3;ID=intron:HG002_chrY_T0000895:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9614614	9614759	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000895;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000895;transcript_name=HG002_chrY_T0000895;gene_name=TSPY3;ID=exon:HG002_chrY_T0000895:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9614614	9614759	.	+	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000895;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000895;transcript_name=HG002_chrY_T0000895;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000895:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9614760	9614854	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000895;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000895;transcript_name=HG002_chrY_T0000895;gene_name=TSPY3;ID=intron:HG002_chrY_T0000895:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9614855	9614947	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000895;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000895;transcript_name=HG002_chrY_T0000895;gene_name=TSPY3;ID=exon:HG002_chrY_T0000895:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9614855	9614917	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000895;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000895;transcript_name=HG002_chrY_T0000895;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000895:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9614915	9614917	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000895;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000895;transcript_name=HG002_chrY_T0000895;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000895;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9614948	9615641	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000895;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000895;transcript_name=HG002_chrY_T0000895;gene_name=TSPY3;ID=intron:HG002_chrY_T0000895:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9615642	9615852	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000895;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000895;transcript_name=HG002_chrY_T0000895;gene_name=TSPY3;ID=exon:HG002_chrY_T0000895:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9613102	9615664	100	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000896;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_G0000286;transcript_name=HG002_chrY_T0000896;gene_name=TSPY3;ID=HG002_chrY_T0000896;Name=TSPY3
HG002_chrY	CAT	exon	9613102	9613188	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000896;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000896;transcript_name=HG002_chrY_T0000896;gene_name=TSPY3;ID=exon:HG002_chrY_T0000896:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9613102	9613188	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000896;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000896;transcript_name=HG002_chrY_T0000896;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000896:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9613102	9613104	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000896;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000896;transcript_name=HG002_chrY_T0000896;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000896;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9613189	9613449	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000896;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000896;transcript_name=HG002_chrY_T0000896;gene_name=TSPY3;ID=intron:HG002_chrY_T0000896:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9613450	9613587	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000896;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000896;transcript_name=HG002_chrY_T0000896;gene_name=TSPY3;ID=exon:HG002_chrY_T0000896:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9613450	9613587	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000896;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000896;transcript_name=HG002_chrY_T0000896;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000896:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9613588	9614194	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000896;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000896;transcript_name=HG002_chrY_T0000896;gene_name=TSPY3;ID=intron:HG002_chrY_T0000896:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9614195	9614272	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000896;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000896;transcript_name=HG002_chrY_T0000896;gene_name=TSPY3;ID=exon:HG002_chrY_T0000896:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9614195	9614272	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000896;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000896;transcript_name=HG002_chrY_T0000896;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000896:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9614273	9614400	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000896;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000896;transcript_name=HG002_chrY_T0000896;gene_name=TSPY3;ID=intron:HG002_chrY_T0000896:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9614401	9614512	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000896;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000896;transcript_name=HG002_chrY_T0000896;gene_name=TSPY3;ID=exon:HG002_chrY_T0000896:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9614401	9614512	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000896;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000896;transcript_name=HG002_chrY_T0000896;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000896:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9614513	9614613	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000896;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000896;transcript_name=HG002_chrY_T0000896;gene_name=TSPY3;ID=intron:HG002_chrY_T0000896:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9614614	9614759	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000896;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000896;transcript_name=HG002_chrY_T0000896;gene_name=TSPY3;ID=exon:HG002_chrY_T0000896:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9614614	9614759	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000896;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000896;transcript_name=HG002_chrY_T0000896;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000896:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9614760	9614865	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000896;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000896;transcript_name=HG002_chrY_T0000896;gene_name=TSPY3;ID=intron:HG002_chrY_T0000896:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9614866	9614947	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000896;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000896;transcript_name=HG002_chrY_T0000896;gene_name=TSPY3;ID=exon:HG002_chrY_T0000896:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9614866	9614947	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000896;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000896;transcript_name=HG002_chrY_T0000896;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000896:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9614948	9615641	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000896;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000896;transcript_name=HG002_chrY_T0000896;gene_name=TSPY3;ID=intron:HG002_chrY_T0000896:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9615642	9615664	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000896;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000896;transcript_name=HG002_chrY_T0000896;gene_name=TSPY3;ID=exon:HG002_chrY_T0000896:6;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9615642	9615664	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000896;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000896;transcript_name=HG002_chrY_T0000896;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000896:6;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9615662	9615664	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000896;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000896;transcript_name=HG002_chrY_T0000896;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000896;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9613102	9615859	1000	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000897;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_G0000286;transcript_name=HG002_chrY_T0000897;gene_name=TSPY3;ID=HG002_chrY_T0000897;Name=TSPY3
HG002_chrY	CAT	exon	9613102	9613587	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000897;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000897;transcript_name=HG002_chrY_T0000897;gene_name=TSPY3;ID=exon:HG002_chrY_T0000897:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9613588	9614194	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000897;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000897;transcript_name=HG002_chrY_T0000897;gene_name=TSPY3;ID=intron:HG002_chrY_T0000897:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9614195	9614272	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000897;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000897;transcript_name=HG002_chrY_T0000897;gene_name=TSPY3;ID=exon:HG002_chrY_T0000897:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9614273	9614400	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000897;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000897;transcript_name=HG002_chrY_T0000897;gene_name=TSPY3;ID=intron:HG002_chrY_T0000897:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9614401	9614947	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000897;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000897;transcript_name=HG002_chrY_T0000897;gene_name=TSPY3;ID=exon:HG002_chrY_T0000897:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9614948	9615074	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000897;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000897;transcript_name=HG002_chrY_T0000897;gene_name=TSPY3;ID=intron:HG002_chrY_T0000897:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9615075	9615859	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000897;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000897;transcript_name=HG002_chrY_T0000897;gene_name=TSPY3;ID=exon:HG002_chrY_T0000897:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9614462	9615844	1000	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000898;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_G0000286;transcript_name=HG002_chrY_T0000898;gene_name=TSPY3;ID=HG002_chrY_T0000898;Name=TSPY3
HG002_chrY	CAT	exon	9614462	9614759	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000898;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000898;transcript_name=HG002_chrY_T0000898;gene_name=TSPY3;ID=exon:HG002_chrY_T0000898:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9614760	9614854	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000898;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000898;transcript_name=HG002_chrY_T0000898;gene_name=TSPY3;ID=intron:HG002_chrY_T0000898:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9614855	9614947	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000898;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000898;transcript_name=HG002_chrY_T0000898;gene_name=TSPY3;ID=exon:HG002_chrY_T0000898:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9614948	9615641	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000898;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000898;transcript_name=HG002_chrY_T0000898;gene_name=TSPY3;ID=intron:HG002_chrY_T0000898:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9615642	9615844	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000898;gene_id=HG002_chrY_G0000286;Parent=HG002_chrY_T0000898;transcript_name=HG002_chrY_T0000898;gene_name=TSPY3;ID=exon:HG002_chrY_T0000898:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9623086	9630979	.	-	.	source_gene_common_name=FAM197Y6;source_gene=ENSG00000237802.7;gene_id=HG002_chrY_G0000287;gene_biotype=lncRNA;gene_name=FAM197Y6;gene_sources=liftoff;ID=HG002_chrY_G0000287;Name=FAM197Y6
HG002_chrY	CAT	transcript	9623086	9630979	1000	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG002_chrY_T0000899;gene_id=HG002_chrY_G0000287;Parent=HG002_chrY_G0000287;transcript_name=HG002_chrY_T0000899;gene_name=FAM197Y6;ID=HG002_chrY_T0000899;Name=FAM197Y6
HG002_chrY	CAT	exon	9623086	9625214	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG002_chrY_T0000899;gene_id=HG002_chrY_G0000287;Parent=HG002_chrY_T0000899;transcript_name=HG002_chrY_T0000899;gene_name=FAM197Y6;ID=exon:HG002_chrY_T0000899:0;Name=FAM197Y6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9625215	9628765	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG002_chrY_T0000899;gene_id=HG002_chrY_G0000287;Parent=HG002_chrY_T0000899;transcript_name=HG002_chrY_T0000899;gene_name=FAM197Y6;ID=intron:HG002_chrY_T0000899:0;Name=FAM197Y6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9628766	9628851	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG002_chrY_T0000899;gene_id=HG002_chrY_G0000287;Parent=HG002_chrY_T0000899;transcript_name=HG002_chrY_T0000899;gene_name=FAM197Y6;ID=exon:HG002_chrY_T0000899:1;Name=FAM197Y6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9628852	9630658	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG002_chrY_T0000899;gene_id=HG002_chrY_G0000287;Parent=HG002_chrY_T0000899;transcript_name=HG002_chrY_T0000899;gene_name=FAM197Y6;ID=intron:HG002_chrY_T0000899:1;Name=FAM197Y6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9630659	9630768	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG002_chrY_T0000899;gene_id=HG002_chrY_G0000287;Parent=HG002_chrY_T0000899;transcript_name=HG002_chrY_T0000899;gene_name=FAM197Y6;ID=exon:HG002_chrY_T0000899:2;Name=FAM197Y6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9630769	9630964	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG002_chrY_T0000899;gene_id=HG002_chrY_G0000287;Parent=HG002_chrY_T0000899;transcript_name=HG002_chrY_T0000899;gene_name=FAM197Y6;ID=intron:HG002_chrY_T0000899:2;Name=FAM197Y6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9630965	9630979	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG002_chrY_T0000899;gene_id=HG002_chrY_G0000287;Parent=HG002_chrY_T0000899;transcript_name=HG002_chrY_T0000899;gene_name=FAM197Y6;ID=exon:HG002_chrY_T0000899:3;Name=FAM197Y6;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9625155	9630760	1000	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG002_chrY_T0000900;gene_id=HG002_chrY_G0000287;Parent=HG002_chrY_G0000287;transcript_name=HG002_chrY_T0000900;gene_name=FAM197Y6;ID=HG002_chrY_T0000900;Name=FAM197Y6
HG002_chrY	CAT	exon	9625155	9625214	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG002_chrY_T0000900;gene_id=HG002_chrY_G0000287;Parent=HG002_chrY_T0000900;transcript_name=HG002_chrY_T0000900;gene_name=FAM197Y6;ID=exon:HG002_chrY_T0000900:0;Name=FAM197Y6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9625215	9628765	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG002_chrY_T0000900;gene_id=HG002_chrY_G0000287;Parent=HG002_chrY_T0000900;transcript_name=HG002_chrY_T0000900;gene_name=FAM197Y6;ID=intron:HG002_chrY_T0000900:0;Name=FAM197Y6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9628766	9628924	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG002_chrY_T0000900;gene_id=HG002_chrY_G0000287;Parent=HG002_chrY_T0000900;transcript_name=HG002_chrY_T0000900;gene_name=FAM197Y6;ID=exon:HG002_chrY_T0000900:1;Name=FAM197Y6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9628925	9630426	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG002_chrY_T0000900;gene_id=HG002_chrY_G0000287;Parent=HG002_chrY_T0000900;transcript_name=HG002_chrY_T0000900;gene_name=FAM197Y6;ID=intron:HG002_chrY_T0000900:1;Name=FAM197Y6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9630427	9630572	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG002_chrY_T0000900;gene_id=HG002_chrY_G0000287;Parent=HG002_chrY_T0000900;transcript_name=HG002_chrY_T0000900;gene_name=FAM197Y6;ID=exon:HG002_chrY_T0000900:2;Name=FAM197Y6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9630573	9630658	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG002_chrY_T0000900;gene_id=HG002_chrY_G0000287;Parent=HG002_chrY_T0000900;transcript_name=HG002_chrY_T0000900;gene_name=FAM197Y6;ID=intron:HG002_chrY_T0000900:2;Name=FAM197Y6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9630659	9630760	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG002_chrY_T0000900;gene_id=HG002_chrY_G0000287;Parent=HG002_chrY_T0000900;transcript_name=HG002_chrY_T0000900;gene_name=FAM197Y6;ID=exon:HG002_chrY_T0000900:3;Name=FAM197Y6;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9630427	9632419	.	-	.	source_gene_common_name=ENSG00000286173;source_gene=ENSG00000286173.1;gene_id=HG002_chrY_G0000288;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000286173;gene_sources=liftoff;ID=HG002_chrY_G0000288;Name=ENSG00000286173
HG002_chrY	CAT	transcript	9630427	9632419	1000	-	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=HG002_chrY_T0000901;gene_id=HG002_chrY_G0000288;Parent=HG002_chrY_G0000288;transcript_name=HG002_chrY_T0000901;gene_name=ENSG00000286173;ID=HG002_chrY_T0000901;Name=ENSG00000286173
HG002_chrY	CAT	exon	9630427	9630572	.	-	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=HG002_chrY_T0000901;gene_id=HG002_chrY_G0000288;Parent=HG002_chrY_T0000901;transcript_name=HG002_chrY_T0000901;gene_name=ENSG00000286173;ID=exon:HG002_chrY_T0000901:0;Name=ENSG00000286173;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9630573	9632108	.	-	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=HG002_chrY_T0000901;gene_id=HG002_chrY_G0000288;Parent=HG002_chrY_T0000901;transcript_name=HG002_chrY_T0000901;gene_name=ENSG00000286173;ID=intron:HG002_chrY_T0000901:0;Name=ENSG00000286173;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9632109	9632419	.	-	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=HG002_chrY_T0000901;gene_id=HG002_chrY_G0000288;Parent=HG002_chrY_T0000901;transcript_name=HG002_chrY_T0000901;gene_name=ENSG00000286173;ID=exon:HG002_chrY_T0000901:1;Name=ENSG00000286173;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9633374	9636170	.	+	.	source_gene_common_name=TSPY1;source_gene=ENSG00000258992.7;gene_id=HG002_chrY_G0000289;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=HG002_chrY_G0000289;Name=TSPY1
HG002_chrY	CAT	transcript	9633374	9636169	100	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000902;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_G0000289;transcript_name=HG002_chrY_T0000902;gene_name=TSPY1;ID=HG002_chrY_T0000902;Name=TSPY1
HG002_chrY	CAT	exon	9633374	9633905	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000902;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000902;transcript_name=HG002_chrY_T0000902;gene_name=TSPY1;ID=exon:HG002_chrY_T0000902:0;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9633420	9633905	.	+	0	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000902;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000902;transcript_name=HG002_chrY_T0000902;gene_name=TSPY1;ID=CDS:HG002_chrY_T0000902:0;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9633420	9633422	.	+	0	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000902;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000902;transcript_name=HG002_chrY_T0000902;gene_name=TSPY1;ID=start_codon:HG002_chrY_T0000902;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9633906	9634512	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000902;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000902;transcript_name=HG002_chrY_T0000902;gene_name=TSPY1;ID=intron:HG002_chrY_T0000902:0;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9634513	9634590	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000902;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000902;transcript_name=HG002_chrY_T0000902;gene_name=TSPY1;ID=exon:HG002_chrY_T0000902:1;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9634513	9634590	.	+	0	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000902;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000902;transcript_name=HG002_chrY_T0000902;gene_name=TSPY1;ID=CDS:HG002_chrY_T0000902:1;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9634591	9634718	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000902;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000902;transcript_name=HG002_chrY_T0000902;gene_name=TSPY1;ID=intron:HG002_chrY_T0000902:1;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9634719	9634830	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000902;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000902;transcript_name=HG002_chrY_T0000902;gene_name=TSPY1;ID=exon:HG002_chrY_T0000902:2;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9634719	9634830	.	+	0	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000902;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000902;transcript_name=HG002_chrY_T0000902;gene_name=TSPY1;ID=CDS:HG002_chrY_T0000902:2;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9634831	9634931	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000902;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000902;transcript_name=HG002_chrY_T0000902;gene_name=TSPY1;ID=intron:HG002_chrY_T0000902:2;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9634932	9635077	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000902;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000902;transcript_name=HG002_chrY_T0000902;gene_name=TSPY1;ID=exon:HG002_chrY_T0000902:3;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9634932	9635077	.	+	2	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000902;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000902;transcript_name=HG002_chrY_T0000902;gene_name=TSPY1;ID=CDS:HG002_chrY_T0000902:3;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9635078	9635172	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000902;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000902;transcript_name=HG002_chrY_T0000902;gene_name=TSPY1;ID=intron:HG002_chrY_T0000902:3;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9635173	9635265	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000902;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000902;transcript_name=HG002_chrY_T0000902;gene_name=TSPY1;ID=exon:HG002_chrY_T0000902:4;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9635173	9635235	.	+	0	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000902;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000902;transcript_name=HG002_chrY_T0000902;gene_name=TSPY1;ID=CDS:HG002_chrY_T0000902:4;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9635233	9635235	.	+	0	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000902;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000902;transcript_name=HG002_chrY_T0000902;gene_name=TSPY1;ID=stop_codon:HG002_chrY_T0000902;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9635266	9635959	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000902;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000902;transcript_name=HG002_chrY_T0000902;gene_name=TSPY1;ID=intron:HG002_chrY_T0000902:4;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9635960	9636169	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000902;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000902;transcript_name=HG002_chrY_T0000902;gene_name=TSPY1;ID=exon:HG002_chrY_T0000902:5;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9633374	9636170	100	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000903;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_G0000289;transcript_name=HG002_chrY_T0000903;gene_name=TSPY1;ID=HG002_chrY_T0000903;Name=TSPY1
HG002_chrY	CAT	exon	9633374	9633905	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000903;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000903;transcript_name=HG002_chrY_T0000903;gene_name=TSPY1;ID=exon:HG002_chrY_T0000903:0;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9633420	9633905	.	+	0	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000903;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000903;transcript_name=HG002_chrY_T0000903;gene_name=TSPY1;ID=CDS:HG002_chrY_T0000903:0;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9633420	9633422	.	+	0	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000903;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000903;transcript_name=HG002_chrY_T0000903;gene_name=TSPY1;ID=start_codon:HG002_chrY_T0000903;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9633906	9634512	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000903;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000903;transcript_name=HG002_chrY_T0000903;gene_name=TSPY1;ID=intron:HG002_chrY_T0000903:0;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9634513	9634590	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000903;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000903;transcript_name=HG002_chrY_T0000903;gene_name=TSPY1;ID=exon:HG002_chrY_T0000903:1;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9634513	9634590	.	+	0	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000903;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000903;transcript_name=HG002_chrY_T0000903;gene_name=TSPY1;ID=CDS:HG002_chrY_T0000903:1;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9634591	9634718	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000903;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000903;transcript_name=HG002_chrY_T0000903;gene_name=TSPY1;ID=intron:HG002_chrY_T0000903:1;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9634719	9634830	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000903;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000903;transcript_name=HG002_chrY_T0000903;gene_name=TSPY1;ID=exon:HG002_chrY_T0000903:2;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9634719	9634830	.	+	0	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000903;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000903;transcript_name=HG002_chrY_T0000903;gene_name=TSPY1;ID=CDS:HG002_chrY_T0000903:2;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9634831	9634931	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000903;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000903;transcript_name=HG002_chrY_T0000903;gene_name=TSPY1;ID=intron:HG002_chrY_T0000903:2;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9634932	9635077	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000903;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000903;transcript_name=HG002_chrY_T0000903;gene_name=TSPY1;ID=exon:HG002_chrY_T0000903:3;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9634932	9635077	.	+	2	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000903;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000903;transcript_name=HG002_chrY_T0000903;gene_name=TSPY1;ID=CDS:HG002_chrY_T0000903:3;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9635078	9635183	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000903;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000903;transcript_name=HG002_chrY_T0000903;gene_name=TSPY1;ID=intron:HG002_chrY_T0000903:3;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9635184	9635265	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000903;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000903;transcript_name=HG002_chrY_T0000903;gene_name=TSPY1;ID=exon:HG002_chrY_T0000903:4;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9635184	9635265	.	+	0	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000903;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000903;transcript_name=HG002_chrY_T0000903;gene_name=TSPY1;ID=CDS:HG002_chrY_T0000903:4;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9635266	9635959	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000903;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000903;transcript_name=HG002_chrY_T0000903;gene_name=TSPY1;ID=intron:HG002_chrY_T0000903:4;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9635960	9636170	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000903;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000903;transcript_name=HG002_chrY_T0000903;gene_name=TSPY1;ID=exon:HG002_chrY_T0000903:5;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9635960	9635982	.	+	2	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000903;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000903;transcript_name=HG002_chrY_T0000903;gene_name=TSPY1;ID=CDS:HG002_chrY_T0000903:5;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9635980	9635982	.	+	0	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG002_chrY_T0000903;gene_id=HG002_chrY_G0000289;Parent=HG002_chrY_T0000903;transcript_name=HG002_chrY_T0000903;gene_name=TSPY1;ID=stop_codon:HG002_chrY_T0000903;Name=TSPY1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9645459	9651060	.	-	.	source_gene_common_name=FAM197Y4;source_gene=ENSG00000290373.1;gene_id=HG002_chrY_G0000290;gene_biotype=lncRNA;gene_name=FAM197Y4;gene_sources=liftoff;ID=HG002_chrY_G0000290;Name=FAM197Y4
HG002_chrY	CAT	transcript	9645459	9651060	1000	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG002_chrY_T0000904;gene_id=HG002_chrY_G0000290;Parent=HG002_chrY_G0000290;transcript_name=HG002_chrY_T0000904;gene_name=FAM197Y4;ID=HG002_chrY_T0000904;Name=FAM197Y4
HG002_chrY	CAT	exon	9645459	9645518	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG002_chrY_T0000904;gene_id=HG002_chrY_G0000290;Parent=HG002_chrY_T0000904;transcript_name=HG002_chrY_T0000904;gene_name=FAM197Y4;ID=exon:HG002_chrY_T0000904:0;Name=FAM197Y4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9645519	9649067	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG002_chrY_T0000904;gene_id=HG002_chrY_G0000290;Parent=HG002_chrY_T0000904;transcript_name=HG002_chrY_T0000904;gene_name=FAM197Y4;ID=intron:HG002_chrY_T0000904:0;Name=FAM197Y4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9649068	9649226	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG002_chrY_T0000904;gene_id=HG002_chrY_G0000290;Parent=HG002_chrY_T0000904;transcript_name=HG002_chrY_T0000904;gene_name=FAM197Y4;ID=exon:HG002_chrY_T0000904:1;Name=FAM197Y4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9649227	9650726	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG002_chrY_T0000904;gene_id=HG002_chrY_G0000290;Parent=HG002_chrY_T0000904;transcript_name=HG002_chrY_T0000904;gene_name=FAM197Y4;ID=intron:HG002_chrY_T0000904:1;Name=FAM197Y4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9650727	9650872	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG002_chrY_T0000904;gene_id=HG002_chrY_G0000290;Parent=HG002_chrY_T0000904;transcript_name=HG002_chrY_T0000904;gene_name=FAM197Y4;ID=exon:HG002_chrY_T0000904:2;Name=FAM197Y4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9650873	9650958	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG002_chrY_T0000904;gene_id=HG002_chrY_G0000290;Parent=HG002_chrY_T0000904;transcript_name=HG002_chrY_T0000904;gene_name=FAM197Y4;ID=intron:HG002_chrY_T0000904:2;Name=FAM197Y4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9650959	9651060	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG002_chrY_T0000904;gene_id=HG002_chrY_G0000290;Parent=HG002_chrY_T0000904;transcript_name=HG002_chrY_T0000904;gene_name=FAM197Y4;ID=exon:HG002_chrY_T0000904:3;Name=FAM197Y4;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9650727	9652719	.	-	.	source_gene_common_name=FAM197Y4;source_gene=ENSG00000274196.6;gene_id=HG002_chrY_G0000291;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y4;gene_sources=liftoff;ID=HG002_chrY_G0000291;Name=FAM197Y4
HG002_chrY	CAT	transcript	9650727	9652719	1000	-	.	source_transcript=ENST00000622692.2;source_transcript_name=FAM197Y4-201;source_gene=ENSG00000274196.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000274196.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000622692.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000622692.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG002_chrY_T0000905;gene_id=HG002_chrY_G0000291;Parent=HG002_chrY_G0000291;transcript_name=HG002_chrY_T0000905;gene_name=FAM197Y4;ID=HG002_chrY_T0000905;Name=FAM197Y4
HG002_chrY	CAT	exon	9650727	9650872	.	-	.	source_transcript=ENST00000622692.2;source_transcript_name=FAM197Y4-201;source_gene=ENSG00000274196.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000274196.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000622692.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000622692.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG002_chrY_T0000905;gene_id=HG002_chrY_G0000291;Parent=HG002_chrY_T0000905;transcript_name=HG002_chrY_T0000905;gene_name=FAM197Y4;ID=exon:HG002_chrY_T0000905:0;Name=FAM197Y4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9650873	9652408	.	-	.	source_transcript=ENST00000622692.2;source_transcript_name=FAM197Y4-201;source_gene=ENSG00000274196.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000274196.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000622692.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000622692.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG002_chrY_T0000905;gene_id=HG002_chrY_G0000291;Parent=HG002_chrY_T0000905;transcript_name=HG002_chrY_T0000905;gene_name=FAM197Y4;ID=intron:HG002_chrY_T0000905:0;Name=FAM197Y4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9652409	9652719	.	-	.	source_transcript=ENST00000622692.2;source_transcript_name=FAM197Y4-201;source_gene=ENSG00000274196.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000274196.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000622692.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000622692.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG002_chrY_T0000905;gene_id=HG002_chrY_G0000291;Parent=HG002_chrY_T0000905;transcript_name=HG002_chrY_T0000905;gene_name=FAM197Y4;ID=exon:HG002_chrY_T0000905:1;Name=FAM197Y4;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9653673	9656487	.	+	.	source_gene_common_name=TSPY4;source_gene=ENSG00000233803.9;gene_id=HG002_chrY_G0000292;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG002_chrY_G0000292;Name=TSPY4
HG002_chrY	CAT	transcript	9653673	9656487	100	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000906;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_G0000292;transcript_name=HG002_chrY_T0000906;gene_name=TSPY4;ID=HG002_chrY_T0000906;Name=TSPY4
HG002_chrY	CAT	exon	9653673	9654222	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000906;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000906;transcript_name=HG002_chrY_T0000906;gene_name=TSPY4;ID=exon:HG002_chrY_T0000906:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9653719	9654222	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000906;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000906;transcript_name=HG002_chrY_T0000906;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000906:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9653719	9653721	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000906;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000906;transcript_name=HG002_chrY_T0000906;gene_name=TSPY4;ID=start_codon:HG002_chrY_T0000906;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9654223	9654829	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000906;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000906;transcript_name=HG002_chrY_T0000906;gene_name=TSPY4;ID=intron:HG002_chrY_T0000906:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9654830	9654907	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000906;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000906;transcript_name=HG002_chrY_T0000906;gene_name=TSPY4;ID=exon:HG002_chrY_T0000906:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9654830	9654907	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000906;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000906;transcript_name=HG002_chrY_T0000906;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000906:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9654908	9655035	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000906;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000906;transcript_name=HG002_chrY_T0000906;gene_name=TSPY4;ID=intron:HG002_chrY_T0000906:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9655036	9655147	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000906;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000906;transcript_name=HG002_chrY_T0000906;gene_name=TSPY4;ID=exon:HG002_chrY_T0000906:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9655036	9655147	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000906;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000906;transcript_name=HG002_chrY_T0000906;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000906:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9655148	9655248	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000906;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000906;transcript_name=HG002_chrY_T0000906;gene_name=TSPY4;ID=intron:HG002_chrY_T0000906:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9655249	9655394	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000906;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000906;transcript_name=HG002_chrY_T0000906;gene_name=TSPY4;ID=exon:HG002_chrY_T0000906:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9655249	9655394	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000906;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000906;transcript_name=HG002_chrY_T0000906;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000906:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9655395	9655500	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000906;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000906;transcript_name=HG002_chrY_T0000906;gene_name=TSPY4;ID=intron:HG002_chrY_T0000906:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9655501	9655582	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000906;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000906;transcript_name=HG002_chrY_T0000906;gene_name=TSPY4;ID=exon:HG002_chrY_T0000906:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9655501	9655582	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000906;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000906;transcript_name=HG002_chrY_T0000906;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000906:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9655583	9656276	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000906;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000906;transcript_name=HG002_chrY_T0000906;gene_name=TSPY4;ID=intron:HG002_chrY_T0000906:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9656277	9656487	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000906;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000906;transcript_name=HG002_chrY_T0000906;gene_name=TSPY4;ID=exon:HG002_chrY_T0000906:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9656277	9656299	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000906;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000906;transcript_name=HG002_chrY_T0000906;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000906:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9656297	9656299	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000906;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000906;transcript_name=HG002_chrY_T0000906;gene_name=TSPY4;ID=stop_codon:HG002_chrY_T0000906;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9653673	9656366	100	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000907;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_G0000292;transcript_name=HG002_chrY_T0000907;gene_name=TSPY4;ID=HG002_chrY_T0000907;Name=TSPY4
HG002_chrY	CAT	exon	9653673	9653805	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000907;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000907;transcript_name=HG002_chrY_T0000907;gene_name=TSPY4;ID=exon:HG002_chrY_T0000907:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9653719	9653805	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000907;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000907;transcript_name=HG002_chrY_T0000907;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000907:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9653719	9653721	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000907;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000907;transcript_name=HG002_chrY_T0000907;gene_name=TSPY4;ID=start_codon:HG002_chrY_T0000907;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9653806	9654084	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000907;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000907;transcript_name=HG002_chrY_T0000907;gene_name=TSPY4;ID=intron:HG002_chrY_T0000907:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9654085	9654222	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000907;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000907;transcript_name=HG002_chrY_T0000907;gene_name=TSPY4;ID=exon:HG002_chrY_T0000907:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9654085	9654222	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000907;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000907;transcript_name=HG002_chrY_T0000907;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000907:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9654223	9654829	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000907;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000907;transcript_name=HG002_chrY_T0000907;gene_name=TSPY4;ID=intron:HG002_chrY_T0000907:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9654830	9654907	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000907;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000907;transcript_name=HG002_chrY_T0000907;gene_name=TSPY4;ID=exon:HG002_chrY_T0000907:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9654830	9654907	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000907;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000907;transcript_name=HG002_chrY_T0000907;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000907:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9654908	9655035	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000907;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000907;transcript_name=HG002_chrY_T0000907;gene_name=TSPY4;ID=intron:HG002_chrY_T0000907:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9655036	9655147	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000907;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000907;transcript_name=HG002_chrY_T0000907;gene_name=TSPY4;ID=exon:HG002_chrY_T0000907:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9655036	9655147	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000907;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000907;transcript_name=HG002_chrY_T0000907;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000907:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9655148	9655248	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000907;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000907;transcript_name=HG002_chrY_T0000907;gene_name=TSPY4;ID=intron:HG002_chrY_T0000907:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9655249	9655394	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000907;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000907;transcript_name=HG002_chrY_T0000907;gene_name=TSPY4;ID=exon:HG002_chrY_T0000907:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9655249	9655394	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000907;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000907;transcript_name=HG002_chrY_T0000907;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000907:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9655395	9655500	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000907;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000907;transcript_name=HG002_chrY_T0000907;gene_name=TSPY4;ID=intron:HG002_chrY_T0000907:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9655501	9655582	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000907;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000907;transcript_name=HG002_chrY_T0000907;gene_name=TSPY4;ID=exon:HG002_chrY_T0000907:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9655501	9655582	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000907;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000907;transcript_name=HG002_chrY_T0000907;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000907:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9655583	9656276	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000907;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000907;transcript_name=HG002_chrY_T0000907;gene_name=TSPY4;ID=intron:HG002_chrY_T0000907:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9656277	9656366	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000907;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000907;transcript_name=HG002_chrY_T0000907;gene_name=TSPY4;ID=exon:HG002_chrY_T0000907:6;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9656277	9656299	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000907;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000907;transcript_name=HG002_chrY_T0000907;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000907:6;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9656297	9656299	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000907;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000907;transcript_name=HG002_chrY_T0000907;gene_name=TSPY4;ID=stop_codon:HG002_chrY_T0000907;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9653719	9656486	100	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000908;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_G0000292;transcript_name=HG002_chrY_T0000908;gene_name=TSPY4;ID=HG002_chrY_T0000908;Name=TSPY4
HG002_chrY	CAT	exon	9653719	9654222	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000908;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000908;transcript_name=HG002_chrY_T0000908;gene_name=TSPY4;ID=exon:HG002_chrY_T0000908:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9653719	9654222	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000908;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000908;transcript_name=HG002_chrY_T0000908;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000908:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9653719	9653721	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000908;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000908;transcript_name=HG002_chrY_T0000908;gene_name=TSPY4;ID=start_codon:HG002_chrY_T0000908;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9654223	9654829	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000908;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000908;transcript_name=HG002_chrY_T0000908;gene_name=TSPY4;ID=intron:HG002_chrY_T0000908:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9654830	9654907	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000908;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000908;transcript_name=HG002_chrY_T0000908;gene_name=TSPY4;ID=exon:HG002_chrY_T0000908:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9654830	9654907	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000908;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000908;transcript_name=HG002_chrY_T0000908;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000908:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9654908	9655035	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000908;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000908;transcript_name=HG002_chrY_T0000908;gene_name=TSPY4;ID=intron:HG002_chrY_T0000908:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9655036	9655147	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000908;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000908;transcript_name=HG002_chrY_T0000908;gene_name=TSPY4;ID=exon:HG002_chrY_T0000908:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9655036	9655147	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000908;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000908;transcript_name=HG002_chrY_T0000908;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000908:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9655148	9655248	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000908;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000908;transcript_name=HG002_chrY_T0000908;gene_name=TSPY4;ID=intron:HG002_chrY_T0000908:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9655249	9655394	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000908;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000908;transcript_name=HG002_chrY_T0000908;gene_name=TSPY4;ID=exon:HG002_chrY_T0000908:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9655249	9655394	.	+	2	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000908;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000908;transcript_name=HG002_chrY_T0000908;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000908:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9655395	9655489	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000908;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000908;transcript_name=HG002_chrY_T0000908;gene_name=TSPY4;ID=intron:HG002_chrY_T0000908:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9655490	9655582	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000908;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000908;transcript_name=HG002_chrY_T0000908;gene_name=TSPY4;ID=exon:HG002_chrY_T0000908:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9655490	9655552	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000908;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000908;transcript_name=HG002_chrY_T0000908;gene_name=TSPY4;ID=CDS:HG002_chrY_T0000908:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9655550	9655552	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000908;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000908;transcript_name=HG002_chrY_T0000908;gene_name=TSPY4;ID=stop_codon:HG002_chrY_T0000908;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9655583	9656276	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000908;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000908;transcript_name=HG002_chrY_T0000908;gene_name=TSPY4;ID=intron:HG002_chrY_T0000908:4;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9656277	9656486	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000908;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000908;transcript_name=HG002_chrY_T0000908;gene_name=TSPY4;ID=exon:HG002_chrY_T0000908:5;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9653719	9656493	1000	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000909;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_G0000292;transcript_name=HG002_chrY_T0000909;gene_name=TSPY4;ID=HG002_chrY_T0000909;Name=TSPY4
HG002_chrY	CAT	exon	9653719	9654222	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000909;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000909;transcript_name=HG002_chrY_T0000909;gene_name=TSPY4;ID=exon:HG002_chrY_T0000909:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9654223	9654829	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000909;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000909;transcript_name=HG002_chrY_T0000909;gene_name=TSPY4;ID=intron:HG002_chrY_T0000909:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9654830	9654907	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000909;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000909;transcript_name=HG002_chrY_T0000909;gene_name=TSPY4;ID=exon:HG002_chrY_T0000909:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9654908	9655035	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000909;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000909;transcript_name=HG002_chrY_T0000909;gene_name=TSPY4;ID=intron:HG002_chrY_T0000909:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9655036	9655582	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000909;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000909;transcript_name=HG002_chrY_T0000909;gene_name=TSPY4;ID=exon:HG002_chrY_T0000909:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9655583	9655709	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000909;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000909;transcript_name=HG002_chrY_T0000909;gene_name=TSPY4;ID=intron:HG002_chrY_T0000909:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9655710	9656493	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000909;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000909;transcript_name=HG002_chrY_T0000909;gene_name=TSPY4;ID=exon:HG002_chrY_T0000909:3;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9655097	9656478	1000	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000910;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_G0000292;transcript_name=HG002_chrY_T0000910;gene_name=TSPY4;ID=HG002_chrY_T0000910;Name=TSPY4
HG002_chrY	CAT	exon	9655097	9655394	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000910;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000910;transcript_name=HG002_chrY_T0000910;gene_name=TSPY4;ID=exon:HG002_chrY_T0000910:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9655395	9655489	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000910;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000910;transcript_name=HG002_chrY_T0000910;gene_name=TSPY4;ID=intron:HG002_chrY_T0000910:0;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9655490	9655582	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000910;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000910;transcript_name=HG002_chrY_T0000910;gene_name=TSPY4;ID=exon:HG002_chrY_T0000910:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9655583	9656276	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000910;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000910;transcript_name=HG002_chrY_T0000910;gene_name=TSPY4;ID=intron:HG002_chrY_T0000910:1;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9656277	9656478	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG002_chrY_T0000910;gene_id=HG002_chrY_G0000292;Parent=HG002_chrY_T0000910;transcript_name=HG002_chrY_T0000910;gene_name=TSPY4;ID=exon:HG002_chrY_T0000910:2;Name=TSPY4;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9663716	9671593	.	-	.	source_gene_common_name=ENSG00000290332;source_gene=ENSG00000290332.1_1;gene_id=HG002_chrY_G0000293;gene_biotype=lncRNA;gene_name=ENSG00000290332;gene_sources=liftoff;ID=HG002_chrY_G0000293;Name=ENSG00000290332
HG002_chrY	CAT	transcript	9663716	9671593	1000	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG002_chrY_T0000911;gene_id=HG002_chrY_G0000293;Parent=HG002_chrY_G0000293;transcript_name=HG002_chrY_T0000911;gene_name=ENSG00000290332;ID=HG002_chrY_T0000911;Name=ENSG00000290332
HG002_chrY	CAT	exon	9663716	9665829	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG002_chrY_T0000911;gene_id=HG002_chrY_G0000293;Parent=HG002_chrY_T0000911;transcript_name=HG002_chrY_T0000911;gene_name=ENSG00000290332;ID=exon:HG002_chrY_T0000911:0;Name=ENSG00000290332;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9665830	9669383	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG002_chrY_T0000911;gene_id=HG002_chrY_G0000293;Parent=HG002_chrY_T0000911;transcript_name=HG002_chrY_T0000911;gene_name=ENSG00000290332;ID=intron:HG002_chrY_T0000911:0;Name=ENSG00000290332;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9669384	9669469	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG002_chrY_T0000911;gene_id=HG002_chrY_G0000293;Parent=HG002_chrY_T0000911;transcript_name=HG002_chrY_T0000911;gene_name=ENSG00000290332;ID=exon:HG002_chrY_T0000911:1;Name=ENSG00000290332;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9669470	9671272	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG002_chrY_T0000911;gene_id=HG002_chrY_G0000293;Parent=HG002_chrY_T0000911;transcript_name=HG002_chrY_T0000911;gene_name=ENSG00000290332;ID=intron:HG002_chrY_T0000911:1;Name=ENSG00000290332;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9671273	9671382	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG002_chrY_T0000911;gene_id=HG002_chrY_G0000293;Parent=HG002_chrY_T0000911;transcript_name=HG002_chrY_T0000911;gene_name=ENSG00000290332;ID=exon:HG002_chrY_T0000911:2;Name=ENSG00000290332;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9671383	9671578	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG002_chrY_T0000911;gene_id=HG002_chrY_G0000293;Parent=HG002_chrY_T0000911;transcript_name=HG002_chrY_T0000911;gene_name=ENSG00000290332;ID=intron:HG002_chrY_T0000911:2;Name=ENSG00000290332;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9671579	9671593	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG002_chrY_T0000911;gene_id=HG002_chrY_G0000293;Parent=HG002_chrY_T0000911;transcript_name=HG002_chrY_T0000911;gene_name=ENSG00000290332;ID=exon:HG002_chrY_T0000911:3;Name=ENSG00000290332;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9665770	9671374	1000	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG002_chrY_T0000912;gene_id=HG002_chrY_G0000293;Parent=HG002_chrY_G0000293;transcript_name=HG002_chrY_T0000912;gene_name=ENSG00000290332;ID=HG002_chrY_T0000912;Name=ENSG00000290332
HG002_chrY	CAT	exon	9665770	9665829	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG002_chrY_T0000912;gene_id=HG002_chrY_G0000293;Parent=HG002_chrY_T0000912;transcript_name=HG002_chrY_T0000912;gene_name=ENSG00000290332;ID=exon:HG002_chrY_T0000912:0;Name=ENSG00000290332;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9665830	9669383	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG002_chrY_T0000912;gene_id=HG002_chrY_G0000293;Parent=HG002_chrY_T0000912;transcript_name=HG002_chrY_T0000912;gene_name=ENSG00000290332;ID=intron:HG002_chrY_T0000912:0;Name=ENSG00000290332;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9669384	9669542	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG002_chrY_T0000912;gene_id=HG002_chrY_G0000293;Parent=HG002_chrY_T0000912;transcript_name=HG002_chrY_T0000912;gene_name=ENSG00000290332;ID=exon:HG002_chrY_T0000912:1;Name=ENSG00000290332;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9669543	9671040	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG002_chrY_T0000912;gene_id=HG002_chrY_G0000293;Parent=HG002_chrY_T0000912;transcript_name=HG002_chrY_T0000912;gene_name=ENSG00000290332;ID=intron:HG002_chrY_T0000912:1;Name=ENSG00000290332;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9671041	9671186	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG002_chrY_T0000912;gene_id=HG002_chrY_G0000293;Parent=HG002_chrY_T0000912;transcript_name=HG002_chrY_T0000912;gene_name=ENSG00000290332;ID=exon:HG002_chrY_T0000912:2;Name=ENSG00000290332;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9671187	9671272	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG002_chrY_T0000912;gene_id=HG002_chrY_G0000293;Parent=HG002_chrY_T0000912;transcript_name=HG002_chrY_T0000912;gene_name=ENSG00000290332;ID=intron:HG002_chrY_T0000912:2;Name=ENSG00000290332;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9671273	9671374	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG002_chrY_T0000912;gene_id=HG002_chrY_G0000293;Parent=HG002_chrY_T0000912;transcript_name=HG002_chrY_T0000912;gene_name=ENSG00000290332;ID=exon:HG002_chrY_T0000912:3;Name=ENSG00000290332;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9671041	9673033	.	-	.	source_gene_common_name=FAM197Y2;source_gene=ENSG00000234803.9;gene_id=HG002_chrY_G0000294;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG002_chrY_G0000294;Name=FAM197Y2
HG002_chrY	CAT	transcript	9671041	9673033	1000	-	.	source_transcript=ENST00000598351.3;source_transcript_name=FAM197Y2-201;source_gene=ENSG00000234803.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234803.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000598351.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000598351.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG002_chrY_T0000913;gene_id=HG002_chrY_G0000294;Parent=HG002_chrY_G0000294;transcript_name=HG002_chrY_T0000913;gene_name=FAM197Y2;ID=HG002_chrY_T0000913;Name=FAM197Y2
HG002_chrY	CAT	exon	9671041	9671186	.	-	.	source_transcript=ENST00000598351.3;source_transcript_name=FAM197Y2-201;source_gene=ENSG00000234803.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234803.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000598351.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000598351.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG002_chrY_T0000913;gene_id=HG002_chrY_G0000294;Parent=HG002_chrY_T0000913;transcript_name=HG002_chrY_T0000913;gene_name=FAM197Y2;ID=exon:HG002_chrY_T0000913:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9671187	9672722	.	-	.	source_transcript=ENST00000598351.3;source_transcript_name=FAM197Y2-201;source_gene=ENSG00000234803.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234803.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000598351.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000598351.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG002_chrY_T0000913;gene_id=HG002_chrY_G0000294;Parent=HG002_chrY_T0000913;transcript_name=HG002_chrY_T0000913;gene_name=FAM197Y2;ID=intron:HG002_chrY_T0000913:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9672723	9673033	.	-	.	source_transcript=ENST00000598351.3;source_transcript_name=FAM197Y2-201;source_gene=ENSG00000234803.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234803.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000598351.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000598351.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG002_chrY_T0000913;gene_id=HG002_chrY_G0000294;Parent=HG002_chrY_T0000913;transcript_name=HG002_chrY_T0000913;gene_name=FAM197Y2;ID=exon:HG002_chrY_T0000913:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9673987	9676801	.	+	.	source_gene_common_name=TSPY9;source_gene=ENSG00000238074.6;gene_id=HG002_chrY_G0000295;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff;ID=HG002_chrY_G0000295;Name=TSPY9
HG002_chrY	CAT	transcript	9673987	9676801	100	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000914;gene_id=HG002_chrY_G0000295;Parent=HG002_chrY_G0000295;transcript_name=HG002_chrY_T0000914;gene_name=TSPY9;ID=HG002_chrY_T0000914;Name=TSPY9
HG002_chrY	CAT	exon	9673987	9674536	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000914;gene_id=HG002_chrY_G0000295;Parent=HG002_chrY_T0000914;transcript_name=HG002_chrY_T0000914;gene_name=TSPY9;ID=exon:HG002_chrY_T0000914:0;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9674033	9674536	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000914;gene_id=HG002_chrY_G0000295;Parent=HG002_chrY_T0000914;transcript_name=HG002_chrY_T0000914;gene_name=TSPY9;ID=CDS:HG002_chrY_T0000914:0;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9674537	9675143	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000914;gene_id=HG002_chrY_G0000295;Parent=HG002_chrY_T0000914;transcript_name=HG002_chrY_T0000914;gene_name=TSPY9;ID=intron:HG002_chrY_T0000914:0;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9675144	9675221	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000914;gene_id=HG002_chrY_G0000295;Parent=HG002_chrY_T0000914;transcript_name=HG002_chrY_T0000914;gene_name=TSPY9;ID=exon:HG002_chrY_T0000914:1;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9675144	9675221	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000914;gene_id=HG002_chrY_G0000295;Parent=HG002_chrY_T0000914;transcript_name=HG002_chrY_T0000914;gene_name=TSPY9;ID=CDS:HG002_chrY_T0000914:1;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9675222	9675349	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000914;gene_id=HG002_chrY_G0000295;Parent=HG002_chrY_T0000914;transcript_name=HG002_chrY_T0000914;gene_name=TSPY9;ID=intron:HG002_chrY_T0000914:1;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9675350	9675461	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000914;gene_id=HG002_chrY_G0000295;Parent=HG002_chrY_T0000914;transcript_name=HG002_chrY_T0000914;gene_name=TSPY9;ID=exon:HG002_chrY_T0000914:2;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9675350	9675461	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000914;gene_id=HG002_chrY_G0000295;Parent=HG002_chrY_T0000914;transcript_name=HG002_chrY_T0000914;gene_name=TSPY9;ID=CDS:HG002_chrY_T0000914:2;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9675462	9675562	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000914;gene_id=HG002_chrY_G0000295;Parent=HG002_chrY_T0000914;transcript_name=HG002_chrY_T0000914;gene_name=TSPY9;ID=intron:HG002_chrY_T0000914:2;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9675563	9675708	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000914;gene_id=HG002_chrY_G0000295;Parent=HG002_chrY_T0000914;transcript_name=HG002_chrY_T0000914;gene_name=TSPY9;ID=exon:HG002_chrY_T0000914:3;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9675563	9675708	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000914;gene_id=HG002_chrY_G0000295;Parent=HG002_chrY_T0000914;transcript_name=HG002_chrY_T0000914;gene_name=TSPY9;ID=CDS:HG002_chrY_T0000914:3;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9675709	9675814	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000914;gene_id=HG002_chrY_G0000295;Parent=HG002_chrY_T0000914;transcript_name=HG002_chrY_T0000914;gene_name=TSPY9;ID=intron:HG002_chrY_T0000914:3;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9675815	9675896	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000914;gene_id=HG002_chrY_G0000295;Parent=HG002_chrY_T0000914;transcript_name=HG002_chrY_T0000914;gene_name=TSPY9;ID=exon:HG002_chrY_T0000914:4;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9675815	9675896	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000914;gene_id=HG002_chrY_G0000295;Parent=HG002_chrY_T0000914;transcript_name=HG002_chrY_T0000914;gene_name=TSPY9;ID=CDS:HG002_chrY_T0000914:4;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9675897	9676590	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000914;gene_id=HG002_chrY_G0000295;Parent=HG002_chrY_T0000914;transcript_name=HG002_chrY_T0000914;gene_name=TSPY9;ID=intron:HG002_chrY_T0000914:4;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9676591	9676801	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000914;gene_id=HG002_chrY_G0000295;Parent=HG002_chrY_T0000914;transcript_name=HG002_chrY_T0000914;gene_name=TSPY9;ID=exon:HG002_chrY_T0000914:5;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9676591	9676613	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000914;gene_id=HG002_chrY_G0000295;Parent=HG002_chrY_T0000914;transcript_name=HG002_chrY_T0000914;gene_name=TSPY9;ID=CDS:HG002_chrY_T0000914:5;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9676611	9676613	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000914;gene_id=HG002_chrY_G0000295;Parent=HG002_chrY_T0000914;transcript_name=HG002_chrY_T0000914;gene_name=TSPY9;ID=stop_codon:HG002_chrY_T0000914;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9684004	9691895	.	-	.	source_gene_common_name=ENSG00000290332;source_gene=ENSG00000290332.1;gene_id=HG002_chrY_G0000296;gene_biotype=lncRNA;gene_name=ENSG00000290332;gene_sources=liftoff;ID=HG002_chrY_G0000296;Name=ENSG00000290332
HG002_chrY	CAT	transcript	9684004	9691895	1000	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG002_chrY_T0000915;gene_id=HG002_chrY_G0000296;Parent=HG002_chrY_G0000296;transcript_name=HG002_chrY_T0000915;gene_name=ENSG00000290332;ID=HG002_chrY_T0000915;Name=ENSG00000290332
HG002_chrY	CAT	exon	9684004	9686130	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG002_chrY_T0000915;gene_id=HG002_chrY_G0000296;Parent=HG002_chrY_T0000915;transcript_name=HG002_chrY_T0000915;gene_name=ENSG00000290332;ID=exon:HG002_chrY_T0000915:0;Name=ENSG00000290332;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9686131	9689681	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG002_chrY_T0000915;gene_id=HG002_chrY_G0000296;Parent=HG002_chrY_T0000915;transcript_name=HG002_chrY_T0000915;gene_name=ENSG00000290332;ID=intron:HG002_chrY_T0000915:0;Name=ENSG00000290332;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9689682	9689767	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG002_chrY_T0000915;gene_id=HG002_chrY_G0000296;Parent=HG002_chrY_T0000915;transcript_name=HG002_chrY_T0000915;gene_name=ENSG00000290332;ID=exon:HG002_chrY_T0000915:1;Name=ENSG00000290332;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9689768	9691574	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG002_chrY_T0000915;gene_id=HG002_chrY_G0000296;Parent=HG002_chrY_T0000915;transcript_name=HG002_chrY_T0000915;gene_name=ENSG00000290332;ID=intron:HG002_chrY_T0000915:1;Name=ENSG00000290332;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9691575	9691684	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG002_chrY_T0000915;gene_id=HG002_chrY_G0000296;Parent=HG002_chrY_T0000915;transcript_name=HG002_chrY_T0000915;gene_name=ENSG00000290332;ID=exon:HG002_chrY_T0000915:2;Name=ENSG00000290332;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9691685	9691880	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG002_chrY_T0000915;gene_id=HG002_chrY_G0000296;Parent=HG002_chrY_T0000915;transcript_name=HG002_chrY_T0000915;gene_name=ENSG00000290332;ID=intron:HG002_chrY_T0000915:2;Name=ENSG00000290332;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9691881	9691895	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG002_chrY_T0000915;gene_id=HG002_chrY_G0000296;Parent=HG002_chrY_T0000915;transcript_name=HG002_chrY_T0000915;gene_name=ENSG00000290332;ID=exon:HG002_chrY_T0000915:3;Name=ENSG00000290332;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9686071	9691676	1000	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG002_chrY_T0000916;gene_id=HG002_chrY_G0000296;Parent=HG002_chrY_G0000296;transcript_name=HG002_chrY_T0000916;gene_name=ENSG00000290332;ID=HG002_chrY_T0000916;Name=ENSG00000290332
HG002_chrY	CAT	exon	9686071	9686130	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG002_chrY_T0000916;gene_id=HG002_chrY_G0000296;Parent=HG002_chrY_T0000916;transcript_name=HG002_chrY_T0000916;gene_name=ENSG00000290332;ID=exon:HG002_chrY_T0000916:0;Name=ENSG00000290332;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9686131	9689681	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG002_chrY_T0000916;gene_id=HG002_chrY_G0000296;Parent=HG002_chrY_T0000916;transcript_name=HG002_chrY_T0000916;gene_name=ENSG00000290332;ID=intron:HG002_chrY_T0000916:0;Name=ENSG00000290332;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9689682	9689840	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG002_chrY_T0000916;gene_id=HG002_chrY_G0000296;Parent=HG002_chrY_T0000916;transcript_name=HG002_chrY_T0000916;gene_name=ENSG00000290332;ID=exon:HG002_chrY_T0000916:1;Name=ENSG00000290332;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9689841	9691342	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG002_chrY_T0000916;gene_id=HG002_chrY_G0000296;Parent=HG002_chrY_T0000916;transcript_name=HG002_chrY_T0000916;gene_name=ENSG00000290332;ID=intron:HG002_chrY_T0000916:1;Name=ENSG00000290332;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9691343	9691488	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG002_chrY_T0000916;gene_id=HG002_chrY_G0000296;Parent=HG002_chrY_T0000916;transcript_name=HG002_chrY_T0000916;gene_name=ENSG00000290332;ID=exon:HG002_chrY_T0000916:2;Name=ENSG00000290332;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9691489	9691574	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG002_chrY_T0000916;gene_id=HG002_chrY_G0000296;Parent=HG002_chrY_T0000916;transcript_name=HG002_chrY_T0000916;gene_name=ENSG00000290332;ID=intron:HG002_chrY_T0000916:2;Name=ENSG00000290332;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9691575	9691676	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG002_chrY_T0000916;gene_id=HG002_chrY_G0000296;Parent=HG002_chrY_T0000916;transcript_name=HG002_chrY_T0000916;gene_name=ENSG00000290332;ID=exon:HG002_chrY_T0000916:3;Name=ENSG00000290332;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9691343	9693335	.	-	.	source_gene_common_name=FAM197Y2;source_gene=ENSG00000234803.9;gene_id=HG002_chrY_G0000297;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG002_chrY_G0000297;Name=FAM197Y2
HG002_chrY	CAT	transcript	9691343	9693335	1000	-	.	source_transcript=ENST00000598351.3;source_transcript_name=FAM197Y2-201;source_gene=ENSG00000234803.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234803.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000598351.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000598351.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG002_chrY_T0000917;gene_id=HG002_chrY_G0000297;Parent=HG002_chrY_G0000297;transcript_name=HG002_chrY_T0000917;gene_name=FAM197Y2;ID=HG002_chrY_T0000917;Name=FAM197Y2
HG002_chrY	CAT	exon	9691343	9691488	.	-	.	source_transcript=ENST00000598351.3;source_transcript_name=FAM197Y2-201;source_gene=ENSG00000234803.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234803.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000598351.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000598351.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG002_chrY_T0000917;gene_id=HG002_chrY_G0000297;Parent=HG002_chrY_T0000917;transcript_name=HG002_chrY_T0000917;gene_name=FAM197Y2;ID=exon:HG002_chrY_T0000917:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9691489	9693024	.	-	.	source_transcript=ENST00000598351.3;source_transcript_name=FAM197Y2-201;source_gene=ENSG00000234803.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234803.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000598351.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000598351.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG002_chrY_T0000917;gene_id=HG002_chrY_G0000297;Parent=HG002_chrY_T0000917;transcript_name=HG002_chrY_T0000917;gene_name=FAM197Y2;ID=intron:HG002_chrY_T0000917:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9693025	9693335	.	-	.	source_transcript=ENST00000598351.3;source_transcript_name=FAM197Y2-201;source_gene=ENSG00000234803.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234803.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000598351.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000598351.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG002_chrY_T0000917;gene_id=HG002_chrY_G0000297;Parent=HG002_chrY_T0000917;transcript_name=HG002_chrY_T0000917;gene_name=FAM197Y2;ID=exon:HG002_chrY_T0000917:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9694325	9697093	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1;gene_id=HG002_chrY_G0000298;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=HG002_chrY_G0000298;Name=ENSG00000293749
HG002_chrY	CAT	transcript	9694325	9697093	1000	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000918;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_G0000298;transcript_name=HG002_chrY_T0000918;gene_name=ENSG00000293749;ID=HG002_chrY_T0000918;Name=ENSG00000293749
HG002_chrY	CAT	exon	9694325	9694417	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000918;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000918;transcript_name=HG002_chrY_T0000918;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000918:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9694418	9694678	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000918;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000918;transcript_name=HG002_chrY_T0000918;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000918:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9694679	9694816	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000918;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000918;transcript_name=HG002_chrY_T0000918;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000918:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9694817	9695423	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000918;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000918;transcript_name=HG002_chrY_T0000918;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000918:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9695424	9695501	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000918;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000918;transcript_name=HG002_chrY_T0000918;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000918:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9695502	9695629	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000918;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000918;transcript_name=HG002_chrY_T0000918;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000918:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9695630	9695741	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000918;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000918;transcript_name=HG002_chrY_T0000918;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000918:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9695742	9695842	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000918;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000918;transcript_name=HG002_chrY_T0000918;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000918:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9695843	9695988	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000918;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000918;transcript_name=HG002_chrY_T0000918;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000918:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9695989	9696094	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000918;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000918;transcript_name=HG002_chrY_T0000918;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000918:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9696095	9696176	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000918;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000918;transcript_name=HG002_chrY_T0000918;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000918:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9696177	9696870	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000918;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000918;transcript_name=HG002_chrY_T0000918;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000918:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9696871	9697093	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000918;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000918;transcript_name=HG002_chrY_T0000918;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000918:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9694337	9697081	1000	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000920;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_G0000298;transcript_name=HG002_chrY_T0000920;gene_name=ENSG00000293749;ID=HG002_chrY_T0000920;Name=ENSG00000293749
HG002_chrY	CAT	exon	9694337	9694417	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000920;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000920;transcript_name=HG002_chrY_T0000920;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000920:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9694418	9694678	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000920;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000920;transcript_name=HG002_chrY_T0000920;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000920:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9694679	9694816	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000920;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000920;transcript_name=HG002_chrY_T0000920;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000920:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9694817	9695423	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000920;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000920;transcript_name=HG002_chrY_T0000920;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000920:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9695424	9695501	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000920;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000920;transcript_name=HG002_chrY_T0000920;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000920:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9695502	9695629	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000920;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000920;transcript_name=HG002_chrY_T0000920;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000920:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9695630	9695741	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000920;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000920;transcript_name=HG002_chrY_T0000920;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000920:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9695742	9695849	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000920;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000920;transcript_name=HG002_chrY_T0000920;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000920:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9695850	9695988	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000920;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000920;transcript_name=HG002_chrY_T0000920;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000920:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9695989	9696094	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000920;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000920;transcript_name=HG002_chrY_T0000920;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000920:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9696095	9696176	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000920;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000920;transcript_name=HG002_chrY_T0000920;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000920:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9696177	9696870	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000920;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000920;transcript_name=HG002_chrY_T0000920;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000920:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9696871	9697081	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000920;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000920;transcript_name=HG002_chrY_T0000920;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000920:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9694346	9697088	1000	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000921;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_G0000298;transcript_name=HG002_chrY_T0000921;gene_name=ENSG00000293749;ID=HG002_chrY_T0000921;Name=ENSG00000293749
HG002_chrY	CAT	exon	9694346	9694417	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000921;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000921;transcript_name=HG002_chrY_T0000921;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000921:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9694418	9694678	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000921;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000921;transcript_name=HG002_chrY_T0000921;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000921:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9694679	9694816	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000921;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000921;transcript_name=HG002_chrY_T0000921;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000921:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9694817	9695423	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000921;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000921;transcript_name=HG002_chrY_T0000921;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000921:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9695424	9695501	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000921;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000921;transcript_name=HG002_chrY_T0000921;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000921:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9695502	9695629	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000921;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000921;transcript_name=HG002_chrY_T0000921;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000921:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9695630	9695741	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000921;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000921;transcript_name=HG002_chrY_T0000921;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000921:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9695742	9695842	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000921;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000921;transcript_name=HG002_chrY_T0000921;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000921:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9695843	9695988	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000921;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000921;transcript_name=HG002_chrY_T0000921;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000921:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9695989	9696083	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000921;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000921;transcript_name=HG002_chrY_T0000921;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000921:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9696084	9696176	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000921;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000921;transcript_name=HG002_chrY_T0000921;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000921:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9696177	9696870	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000921;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000921;transcript_name=HG002_chrY_T0000921;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000921:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9696871	9697088	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000921;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000921;transcript_name=HG002_chrY_T0000921;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000921:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9694548	9697086	1000	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000922;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_G0000298;transcript_name=HG002_chrY_T0000922;gene_name=ENSG00000293749;ID=HG002_chrY_T0000922;Name=ENSG00000293749
HG002_chrY	CAT	exon	9694548	9694816	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000922;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000922;transcript_name=HG002_chrY_T0000922;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000922:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9694817	9695423	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000922;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000922;transcript_name=HG002_chrY_T0000922;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000922:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9695424	9695501	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000922;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000922;transcript_name=HG002_chrY_T0000922;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000922:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9695502	9695629	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000922;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000922;transcript_name=HG002_chrY_T0000922;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000922:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9695630	9695741	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000922;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000922;transcript_name=HG002_chrY_T0000922;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000922:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9695742	9695842	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000922;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000922;transcript_name=HG002_chrY_T0000922;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000922:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9695843	9695988	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000922;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000922;transcript_name=HG002_chrY_T0000922;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000922:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9695989	9696094	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000922;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000922;transcript_name=HG002_chrY_T0000922;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000922:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9696095	9696176	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000922;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000922;transcript_name=HG002_chrY_T0000922;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000922:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9696177	9696870	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000922;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000922;transcript_name=HG002_chrY_T0000922;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000922:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9696871	9697086	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000922;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000922;transcript_name=HG002_chrY_T0000922;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000922:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9694644	9697081	1000	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000923;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_G0000298;transcript_name=HG002_chrY_T0000923;gene_name=ENSG00000293749;ID=HG002_chrY_T0000923;Name=ENSG00000293749
HG002_chrY	CAT	exon	9694644	9694816	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000923;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000923;transcript_name=HG002_chrY_T0000923;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000923:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9694817	9695423	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000923;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000923;transcript_name=HG002_chrY_T0000923;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000923:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9695424	9695501	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000923;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000923;transcript_name=HG002_chrY_T0000923;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000923:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9695502	9695629	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000923;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000923;transcript_name=HG002_chrY_T0000923;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000923:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9695630	9695741	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000923;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000923;transcript_name=HG002_chrY_T0000923;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000923:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9695742	9695849	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000923;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000923;transcript_name=HG002_chrY_T0000923;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000923:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9695850	9695988	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000923;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000923;transcript_name=HG002_chrY_T0000923;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000923:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9695989	9696094	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000923;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000923;transcript_name=HG002_chrY_T0000923;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000923:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9696095	9696176	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000923;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000923;transcript_name=HG002_chrY_T0000923;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000923:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9696177	9696870	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000923;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000923;transcript_name=HG002_chrY_T0000923;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000923:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9696871	9697081	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000923;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000923;transcript_name=HG002_chrY_T0000923;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000923:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9694770	9697092	1000	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000924;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_G0000298;transcript_name=HG002_chrY_T0000924;gene_name=ENSG00000293749;ID=HG002_chrY_T0000924;Name=ENSG00000293749
HG002_chrY	CAT	exon	9694770	9694872	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000924;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000924;transcript_name=HG002_chrY_T0000924;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000924:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9694873	9695441	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000924;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000924;transcript_name=HG002_chrY_T0000924;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000924:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9695442	9695501	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000924;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000924;transcript_name=HG002_chrY_T0000924;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000924:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9695502	9695629	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000924;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000924;transcript_name=HG002_chrY_T0000924;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000924:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9695630	9695741	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000924;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000924;transcript_name=HG002_chrY_T0000924;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000924:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9695742	9695842	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000924;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000924;transcript_name=HG002_chrY_T0000924;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000924:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9695843	9695988	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000924;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000924;transcript_name=HG002_chrY_T0000924;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000924:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9695989	9696094	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000924;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000924;transcript_name=HG002_chrY_T0000924;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000924:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9696095	9696176	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000924;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000924;transcript_name=HG002_chrY_T0000924;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000924:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9696177	9696870	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000924;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000924;transcript_name=HG002_chrY_T0000924;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000924:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9696871	9697092	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000924;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000924;transcript_name=HG002_chrY_T0000924;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000924:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9695471	9697079	1000	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000925;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_G0000298;transcript_name=HG002_chrY_T0000925;gene_name=ENSG00000293749;ID=HG002_chrY_T0000925;Name=ENSG00000293749
HG002_chrY	CAT	exon	9695471	9695501	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000925;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000925;transcript_name=HG002_chrY_T0000925;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000925:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9695502	9695629	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000925;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000925;transcript_name=HG002_chrY_T0000925;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000925:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9695630	9695988	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000925;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000925;transcript_name=HG002_chrY_T0000925;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000925:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9695989	9696094	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000925;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000925;transcript_name=HG002_chrY_T0000925;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000925:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9696095	9696176	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000925;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000925;transcript_name=HG002_chrY_T0000925;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000925:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9696177	9696870	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000925;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000925;transcript_name=HG002_chrY_T0000925;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000925:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9696871	9697079	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000925;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000925;transcript_name=HG002_chrY_T0000925;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000925:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9696016	9697088	1000	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000926;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_G0000298;transcript_name=HG002_chrY_T0000926;gene_name=ENSG00000293749;ID=HG002_chrY_T0000926;Name=ENSG00000293749
HG002_chrY	CAT	exon	9696016	9696176	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000926;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000926;transcript_name=HG002_chrY_T0000926;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000926:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9696177	9696870	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000926;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000926;transcript_name=HG002_chrY_T0000926;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000926:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9696871	9697088	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000926;gene_id=HG002_chrY_G0000298;Parent=HG002_chrY_T0000926;transcript_name=HG002_chrY_T0000926;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000926:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9694331	9696893	.	+	.	source_gene_common_name=TSPY6P;source_gene=ENSG00000270073.1_3;gene_id=HG002_chrY_G0000299;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY6P;gene_sources=liftoff;ID=HG002_chrY_G0000299;Name=TSPY6P
HG002_chrY	CAT	transcript	9694331	9696893	1000	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000919;gene_id=HG002_chrY_G0000299;Parent=HG002_chrY_G0000299;transcript_name=HG002_chrY_T0000919;gene_name=TSPY6P;ID=HG002_chrY_T0000919;Name=TSPY6P
HG002_chrY	CAT	exon	9694331	9694541	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000919;gene_id=HG002_chrY_G0000299;Parent=HG002_chrY_T0000919;transcript_name=HG002_chrY_T0000919;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000919:0;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9694542	9694549	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000919;gene_id=HG002_chrY_G0000299;Parent=HG002_chrY_T0000919;transcript_name=HG002_chrY_T0000919;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000919:0;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9694550	9694816	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000919;gene_id=HG002_chrY_G0000299;Parent=HG002_chrY_T0000919;transcript_name=HG002_chrY_T0000919;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000919:1;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9694817	9695423	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000919;gene_id=HG002_chrY_G0000299;Parent=HG002_chrY_T0000919;transcript_name=HG002_chrY_T0000919;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000919:1;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9695424	9695501	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000919;gene_id=HG002_chrY_G0000299;Parent=HG002_chrY_T0000919;transcript_name=HG002_chrY_T0000919;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000919:2;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9695502	9695629	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000919;gene_id=HG002_chrY_G0000299;Parent=HG002_chrY_T0000919;transcript_name=HG002_chrY_T0000919;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000919:2;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9695630	9695741	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000919;gene_id=HG002_chrY_G0000299;Parent=HG002_chrY_T0000919;transcript_name=HG002_chrY_T0000919;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000919:3;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9695742	9695842	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000919;gene_id=HG002_chrY_G0000299;Parent=HG002_chrY_T0000919;transcript_name=HG002_chrY_T0000919;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000919:3;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9695843	9695988	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000919;gene_id=HG002_chrY_G0000299;Parent=HG002_chrY_T0000919;transcript_name=HG002_chrY_T0000919;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000919:4;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9695989	9696094	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000919;gene_id=HG002_chrY_G0000299;Parent=HG002_chrY_T0000919;transcript_name=HG002_chrY_T0000919;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000919:4;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9696095	9696176	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000919;gene_id=HG002_chrY_G0000299;Parent=HG002_chrY_T0000919;transcript_name=HG002_chrY_T0000919;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000919:5;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9696177	9696870	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000919;gene_id=HG002_chrY_G0000299;Parent=HG002_chrY_T0000919;transcript_name=HG002_chrY_T0000919;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000919:5;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9696871	9696893	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000919;gene_id=HG002_chrY_G0000299;Parent=HG002_chrY_T0000919;transcript_name=HG002_chrY_T0000919;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000919:6;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9706225	9711971	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=HG002_chrY_G0000300;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000300;Name=FAM197Y5
HG002_chrY	CAT	transcript	9706225	9711971	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000927;gene_id=HG002_chrY_G0000300;Parent=HG002_chrY_G0000300;transcript_name=HG002_chrY_T0000927;gene_name=FAM197Y5;ID=HG002_chrY_T0000927;Name=FAM197Y5
HG002_chrY	CAT	exon	9706225	9706414	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000927;gene_id=HG002_chrY_G0000300;Parent=HG002_chrY_T0000927;transcript_name=HG002_chrY_T0000927;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000927:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9706415	9709964	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000927;gene_id=HG002_chrY_G0000300;Parent=HG002_chrY_T0000927;transcript_name=HG002_chrY_T0000927;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000927:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9709965	9710050	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000927;gene_id=HG002_chrY_G0000300;Parent=HG002_chrY_T0000927;transcript_name=HG002_chrY_T0000927;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000927:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9710051	9711857	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000927;gene_id=HG002_chrY_G0000300;Parent=HG002_chrY_T0000927;transcript_name=HG002_chrY_T0000927;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000927:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9711858	9711971	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000927;gene_id=HG002_chrY_G0000300;Parent=HG002_chrY_T0000927;transcript_name=HG002_chrY_T0000927;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000927:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9706355	9711959	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000928;gene_id=HG002_chrY_G0000300;Parent=HG002_chrY_G0000300;transcript_name=HG002_chrY_T0000928;gene_name=FAM197Y5;ID=HG002_chrY_T0000928;Name=FAM197Y5
HG002_chrY	CAT	exon	9706355	9706414	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000928;gene_id=HG002_chrY_G0000300;Parent=HG002_chrY_T0000928;transcript_name=HG002_chrY_T0000928;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000928:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9706415	9709964	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000928;gene_id=HG002_chrY_G0000300;Parent=HG002_chrY_T0000928;transcript_name=HG002_chrY_T0000928;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000928:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9709965	9710123	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000928;gene_id=HG002_chrY_G0000300;Parent=HG002_chrY_T0000928;transcript_name=HG002_chrY_T0000928;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000928:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9710124	9711625	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000928;gene_id=HG002_chrY_G0000300;Parent=HG002_chrY_T0000928;transcript_name=HG002_chrY_T0000928;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000928:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9711626	9711771	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000928;gene_id=HG002_chrY_G0000300;Parent=HG002_chrY_T0000928;transcript_name=HG002_chrY_T0000928;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000928:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9711772	9711857	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000928;gene_id=HG002_chrY_G0000300;Parent=HG002_chrY_T0000928;transcript_name=HG002_chrY_T0000928;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000928:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9711858	9711959	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000928;gene_id=HG002_chrY_G0000300;Parent=HG002_chrY_T0000928;transcript_name=HG002_chrY_T0000928;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000928:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9711626	9713618	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_18;gene_id=HG002_chrY_G0000301;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000301;Name=FAM197Y5
HG002_chrY	CAT	transcript	9711626	9713618	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_18;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_18;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000929;gene_id=HG002_chrY_G0000301;Parent=HG002_chrY_G0000301;transcript_name=HG002_chrY_T0000929;gene_name=FAM197Y5;ID=HG002_chrY_T0000929;Name=FAM197Y5
HG002_chrY	CAT	exon	9711626	9711771	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_18;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_18;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000929;gene_id=HG002_chrY_G0000301;Parent=HG002_chrY_T0000929;transcript_name=HG002_chrY_T0000929;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000929:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9711772	9713307	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_18;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_18;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000929;gene_id=HG002_chrY_G0000301;Parent=HG002_chrY_T0000929;transcript_name=HG002_chrY_T0000929;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000929:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9713308	9713618	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_18;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_18;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000929;gene_id=HG002_chrY_G0000301;Parent=HG002_chrY_T0000929;transcript_name=HG002_chrY_T0000929;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000929:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9714612	9717381	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1_3;gene_id=HG002_chrY_G0000302;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=HG002_chrY_G0000302;Name=ENSG00000293749
HG002_chrY	CAT	transcript	9714612	9717381	1000	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000930;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_G0000302;transcript_name=HG002_chrY_T0000930;gene_name=ENSG00000293749;ID=HG002_chrY_T0000930;Name=ENSG00000293749
HG002_chrY	CAT	exon	9714612	9714704	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000930;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000930;transcript_name=HG002_chrY_T0000930;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000930:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9714705	9714965	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000930;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000930;transcript_name=HG002_chrY_T0000930;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000930:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9714966	9715103	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000930;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000930;transcript_name=HG002_chrY_T0000930;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000930:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9715104	9715710	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000930;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000930;transcript_name=HG002_chrY_T0000930;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000930:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9715711	9715788	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000930;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000930;transcript_name=HG002_chrY_T0000930;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000930:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9715789	9715916	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000930;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000930;transcript_name=HG002_chrY_T0000930;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000930:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9715917	9716028	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000930;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000930;transcript_name=HG002_chrY_T0000930;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000930:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9716029	9716129	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000930;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000930;transcript_name=HG002_chrY_T0000930;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000930:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9716130	9716275	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000930;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000930;transcript_name=HG002_chrY_T0000930;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000930:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9716276	9716381	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000930;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000930;transcript_name=HG002_chrY_T0000930;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000930:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9716382	9716463	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000930;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000930;transcript_name=HG002_chrY_T0000930;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000930:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9716464	9717157	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000930;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000930;transcript_name=HG002_chrY_T0000930;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000930:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9717158	9717381	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000930;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000930;transcript_name=HG002_chrY_T0000930;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000930:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9714624	9717369	1000	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000932;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_G0000302;transcript_name=HG002_chrY_T0000932;gene_name=ENSG00000293749;ID=HG002_chrY_T0000932;Name=ENSG00000293749
HG002_chrY	CAT	exon	9714624	9714704	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000932;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000932;transcript_name=HG002_chrY_T0000932;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000932:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9714705	9714965	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000932;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000932;transcript_name=HG002_chrY_T0000932;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000932:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9714966	9715103	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000932;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000932;transcript_name=HG002_chrY_T0000932;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000932:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9715104	9715710	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000932;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000932;transcript_name=HG002_chrY_T0000932;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000932:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9715711	9715788	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000932;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000932;transcript_name=HG002_chrY_T0000932;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000932:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9715789	9715916	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000932;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000932;transcript_name=HG002_chrY_T0000932;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000932:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9715917	9716028	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000932;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000932;transcript_name=HG002_chrY_T0000932;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000932:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9716029	9716136	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000932;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000932;transcript_name=HG002_chrY_T0000932;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000932:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9716137	9716275	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000932;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000932;transcript_name=HG002_chrY_T0000932;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000932:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9716276	9716381	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000932;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000932;transcript_name=HG002_chrY_T0000932;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000932:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9716382	9716463	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000932;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000932;transcript_name=HG002_chrY_T0000932;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000932:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9716464	9717157	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000932;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000932;transcript_name=HG002_chrY_T0000932;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000932:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9717158	9717369	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000932;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000932;transcript_name=HG002_chrY_T0000932;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000932:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9714633	9717376	1000	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000933;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_G0000302;transcript_name=HG002_chrY_T0000933;gene_name=ENSG00000293749;ID=HG002_chrY_T0000933;Name=ENSG00000293749
HG002_chrY	CAT	exon	9714633	9714704	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000933;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000933;transcript_name=HG002_chrY_T0000933;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000933:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9714705	9714965	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000933;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000933;transcript_name=HG002_chrY_T0000933;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000933:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9714966	9715103	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000933;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000933;transcript_name=HG002_chrY_T0000933;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000933:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9715104	9715710	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000933;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000933;transcript_name=HG002_chrY_T0000933;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000933:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9715711	9715788	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000933;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000933;transcript_name=HG002_chrY_T0000933;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000933:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9715789	9715916	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000933;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000933;transcript_name=HG002_chrY_T0000933;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000933:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9715917	9716028	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000933;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000933;transcript_name=HG002_chrY_T0000933;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000933:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9716029	9716129	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000933;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000933;transcript_name=HG002_chrY_T0000933;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000933:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9716130	9716275	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000933;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000933;transcript_name=HG002_chrY_T0000933;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000933:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9716276	9716370	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000933;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000933;transcript_name=HG002_chrY_T0000933;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000933:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9716371	9716463	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000933;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000933;transcript_name=HG002_chrY_T0000933;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000933:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9716464	9717157	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000933;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000933;transcript_name=HG002_chrY_T0000933;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000933:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9717158	9717376	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000933;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000933;transcript_name=HG002_chrY_T0000933;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000933:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9714835	9717374	1000	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000934;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_G0000302;transcript_name=HG002_chrY_T0000934;gene_name=ENSG00000293749;ID=HG002_chrY_T0000934;Name=ENSG00000293749
HG002_chrY	CAT	exon	9714835	9715103	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000934;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000934;transcript_name=HG002_chrY_T0000934;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000934:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9715104	9715710	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000934;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000934;transcript_name=HG002_chrY_T0000934;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000934:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9715711	9715788	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000934;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000934;transcript_name=HG002_chrY_T0000934;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000934:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9715789	9715916	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000934;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000934;transcript_name=HG002_chrY_T0000934;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000934:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9715917	9716028	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000934;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000934;transcript_name=HG002_chrY_T0000934;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000934:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9716029	9716129	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000934;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000934;transcript_name=HG002_chrY_T0000934;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000934:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9716130	9716275	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000934;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000934;transcript_name=HG002_chrY_T0000934;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000934:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9716276	9716381	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000934;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000934;transcript_name=HG002_chrY_T0000934;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000934:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9716382	9716463	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000934;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000934;transcript_name=HG002_chrY_T0000934;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000934:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9716464	9717157	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000934;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000934;transcript_name=HG002_chrY_T0000934;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000934:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9717158	9717374	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000934;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000934;transcript_name=HG002_chrY_T0000934;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000934:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9714931	9717369	1000	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000935;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_G0000302;transcript_name=HG002_chrY_T0000935;gene_name=ENSG00000293749;ID=HG002_chrY_T0000935;Name=ENSG00000293749
HG002_chrY	CAT	exon	9714931	9715103	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000935;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000935;transcript_name=HG002_chrY_T0000935;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000935:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9715104	9715710	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000935;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000935;transcript_name=HG002_chrY_T0000935;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000935:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9715711	9715788	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000935;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000935;transcript_name=HG002_chrY_T0000935;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000935:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9715789	9715916	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000935;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000935;transcript_name=HG002_chrY_T0000935;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000935:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9715917	9716028	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000935;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000935;transcript_name=HG002_chrY_T0000935;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000935:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9716029	9716136	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000935;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000935;transcript_name=HG002_chrY_T0000935;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000935:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9716137	9716275	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000935;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000935;transcript_name=HG002_chrY_T0000935;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000935:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9716276	9716381	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000935;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000935;transcript_name=HG002_chrY_T0000935;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000935:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9716382	9716463	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000935;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000935;transcript_name=HG002_chrY_T0000935;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000935:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9716464	9717157	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000935;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000935;transcript_name=HG002_chrY_T0000935;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000935:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9717158	9717369	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000935;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000935;transcript_name=HG002_chrY_T0000935;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000935:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9715057	9717380	1000	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000936;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_G0000302;transcript_name=HG002_chrY_T0000936;gene_name=ENSG00000293749;ID=HG002_chrY_T0000936;Name=ENSG00000293749
HG002_chrY	CAT	exon	9715057	9715159	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000936;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000936;transcript_name=HG002_chrY_T0000936;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000936:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9715160	9715728	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000936;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000936;transcript_name=HG002_chrY_T0000936;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000936:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9715729	9715788	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000936;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000936;transcript_name=HG002_chrY_T0000936;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000936:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9715789	9715916	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000936;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000936;transcript_name=HG002_chrY_T0000936;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000936:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9715917	9716028	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000936;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000936;transcript_name=HG002_chrY_T0000936;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000936:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9716029	9716129	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000936;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000936;transcript_name=HG002_chrY_T0000936;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000936:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9716130	9716275	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000936;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000936;transcript_name=HG002_chrY_T0000936;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000936:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9716276	9716381	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000936;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000936;transcript_name=HG002_chrY_T0000936;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000936:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9716382	9716463	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000936;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000936;transcript_name=HG002_chrY_T0000936;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000936:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9716464	9717157	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000936;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000936;transcript_name=HG002_chrY_T0000936;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000936:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9717158	9717380	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000936;gene_id=HG002_chrY_G0000302;Parent=HG002_chrY_T0000936;transcript_name=HG002_chrY_T0000936;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000936:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9714618	9717180	.	+	.	source_gene_common_name=TSPY6P;source_gene=ENSG00000270073.1_1;gene_id=HG002_chrY_G0000303;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY6P;gene_sources=liftoff;ID=HG002_chrY_G0000303;Name=TSPY6P
HG002_chrY	CAT	transcript	9714618	9717180	1000	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000931;gene_id=HG002_chrY_G0000303;Parent=HG002_chrY_G0000303;transcript_name=HG002_chrY_T0000931;gene_name=TSPY6P;ID=HG002_chrY_T0000931;Name=TSPY6P
HG002_chrY	CAT	exon	9714618	9714828	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000931;gene_id=HG002_chrY_G0000303;Parent=HG002_chrY_T0000931;transcript_name=HG002_chrY_T0000931;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000931:0;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9714829	9714836	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000931;gene_id=HG002_chrY_G0000303;Parent=HG002_chrY_T0000931;transcript_name=HG002_chrY_T0000931;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000931:0;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9714837	9715103	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000931;gene_id=HG002_chrY_G0000303;Parent=HG002_chrY_T0000931;transcript_name=HG002_chrY_T0000931;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000931:1;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9715104	9715710	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000931;gene_id=HG002_chrY_G0000303;Parent=HG002_chrY_T0000931;transcript_name=HG002_chrY_T0000931;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000931:1;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9715711	9715788	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000931;gene_id=HG002_chrY_G0000303;Parent=HG002_chrY_T0000931;transcript_name=HG002_chrY_T0000931;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000931:2;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9715789	9715916	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000931;gene_id=HG002_chrY_G0000303;Parent=HG002_chrY_T0000931;transcript_name=HG002_chrY_T0000931;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000931:2;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9715917	9716028	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000931;gene_id=HG002_chrY_G0000303;Parent=HG002_chrY_T0000931;transcript_name=HG002_chrY_T0000931;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000931:3;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9716029	9716129	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000931;gene_id=HG002_chrY_G0000303;Parent=HG002_chrY_T0000931;transcript_name=HG002_chrY_T0000931;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000931:3;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9716130	9716275	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000931;gene_id=HG002_chrY_G0000303;Parent=HG002_chrY_T0000931;transcript_name=HG002_chrY_T0000931;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000931:4;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9716276	9716381	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000931;gene_id=HG002_chrY_G0000303;Parent=HG002_chrY_T0000931;transcript_name=HG002_chrY_T0000931;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000931:4;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9716382	9716463	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000931;gene_id=HG002_chrY_G0000303;Parent=HG002_chrY_T0000931;transcript_name=HG002_chrY_T0000931;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000931:5;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9716464	9717157	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000931;gene_id=HG002_chrY_G0000303;Parent=HG002_chrY_T0000931;transcript_name=HG002_chrY_T0000931;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000931:5;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9717158	9717180	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000931;gene_id=HG002_chrY_G0000303;Parent=HG002_chrY_T0000931;transcript_name=HG002_chrY_T0000931;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000931:6;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9715758	9717376	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1;gene_id=HG002_chrY_G0000304;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=HG002_chrY_G0000304;Name=ENSG00000293749
HG002_chrY	CAT	transcript	9715758	9717367	1000	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000937;gene_id=HG002_chrY_G0000304;Parent=HG002_chrY_G0000304;transcript_name=HG002_chrY_T0000937;gene_name=ENSG00000293749;ID=HG002_chrY_T0000937;Name=ENSG00000293749
HG002_chrY	CAT	exon	9715758	9715788	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000937;gene_id=HG002_chrY_G0000304;Parent=HG002_chrY_T0000937;transcript_name=HG002_chrY_T0000937;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000937:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9715789	9715916	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000937;gene_id=HG002_chrY_G0000304;Parent=HG002_chrY_T0000937;transcript_name=HG002_chrY_T0000937;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000937:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9715917	9716275	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000937;gene_id=HG002_chrY_G0000304;Parent=HG002_chrY_T0000937;transcript_name=HG002_chrY_T0000937;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000937:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9716276	9716381	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000937;gene_id=HG002_chrY_G0000304;Parent=HG002_chrY_T0000937;transcript_name=HG002_chrY_T0000937;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000937:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9716382	9716463	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000937;gene_id=HG002_chrY_G0000304;Parent=HG002_chrY_T0000937;transcript_name=HG002_chrY_T0000937;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000937:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9716464	9717157	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000937;gene_id=HG002_chrY_G0000304;Parent=HG002_chrY_T0000937;transcript_name=HG002_chrY_T0000937;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000937:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9717158	9717367	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000937;gene_id=HG002_chrY_G0000304;Parent=HG002_chrY_T0000937;transcript_name=HG002_chrY_T0000937;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000937:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9716303	9717376	1000	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000938;gene_id=HG002_chrY_G0000304;Parent=HG002_chrY_G0000304;transcript_name=HG002_chrY_T0000938;gene_name=ENSG00000293749;ID=HG002_chrY_T0000938;Name=ENSG00000293749
HG002_chrY	CAT	exon	9716303	9716463	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000938;gene_id=HG002_chrY_G0000304;Parent=HG002_chrY_T0000938;transcript_name=HG002_chrY_T0000938;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000938:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9716464	9717157	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000938;gene_id=HG002_chrY_G0000304;Parent=HG002_chrY_T0000938;transcript_name=HG002_chrY_T0000938;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000938:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9717158	9717376	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000938;gene_id=HG002_chrY_G0000304;Parent=HG002_chrY_T0000938;transcript_name=HG002_chrY_T0000938;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000938:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9726533	9732268	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=HG002_chrY_G0000305;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000305;Name=FAM197Y5
HG002_chrY	CAT	transcript	9726533	9732268	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000939;gene_id=HG002_chrY_G0000305;Parent=HG002_chrY_G0000305;transcript_name=HG002_chrY_T0000939;gene_name=FAM197Y5;ID=HG002_chrY_T0000939;Name=FAM197Y5
HG002_chrY	CAT	exon	9726533	9726722	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000939;gene_id=HG002_chrY_G0000305;Parent=HG002_chrY_T0000939;transcript_name=HG002_chrY_T0000939;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000939:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9726723	9730269	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000939;gene_id=HG002_chrY_G0000305;Parent=HG002_chrY_T0000939;transcript_name=HG002_chrY_T0000939;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000939:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9730270	9730355	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000939;gene_id=HG002_chrY_G0000305;Parent=HG002_chrY_T0000939;transcript_name=HG002_chrY_T0000939;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000939:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9730356	9732154	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000939;gene_id=HG002_chrY_G0000305;Parent=HG002_chrY_T0000939;transcript_name=HG002_chrY_T0000939;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000939:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9732155	9732268	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000939;gene_id=HG002_chrY_G0000305;Parent=HG002_chrY_T0000939;transcript_name=HG002_chrY_T0000939;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000939:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9726663	9732256	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000940;gene_id=HG002_chrY_G0000305;Parent=HG002_chrY_G0000305;transcript_name=HG002_chrY_T0000940;gene_name=FAM197Y5;ID=HG002_chrY_T0000940;Name=FAM197Y5
HG002_chrY	CAT	exon	9726663	9726722	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000940;gene_id=HG002_chrY_G0000305;Parent=HG002_chrY_T0000940;transcript_name=HG002_chrY_T0000940;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000940:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9726723	9730269	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000940;gene_id=HG002_chrY_G0000305;Parent=HG002_chrY_T0000940;transcript_name=HG002_chrY_T0000940;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000940:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9730270	9730428	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000940;gene_id=HG002_chrY_G0000305;Parent=HG002_chrY_T0000940;transcript_name=HG002_chrY_T0000940;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000940:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9730429	9731922	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000940;gene_id=HG002_chrY_G0000305;Parent=HG002_chrY_T0000940;transcript_name=HG002_chrY_T0000940;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000940:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9731923	9732068	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000940;gene_id=HG002_chrY_G0000305;Parent=HG002_chrY_T0000940;transcript_name=HG002_chrY_T0000940;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000940:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9732069	9732154	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000940;gene_id=HG002_chrY_G0000305;Parent=HG002_chrY_T0000940;transcript_name=HG002_chrY_T0000940;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000940:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9732155	9732256	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000940;gene_id=HG002_chrY_G0000305;Parent=HG002_chrY_T0000940;transcript_name=HG002_chrY_T0000940;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000940:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9731923	9733915	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_20;gene_id=HG002_chrY_G0000306;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000306;Name=FAM197Y5
HG002_chrY	CAT	transcript	9731923	9733915	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_20;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_20;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000941;gene_id=HG002_chrY_G0000306;Parent=HG002_chrY_G0000306;transcript_name=HG002_chrY_T0000941;gene_name=FAM197Y5;ID=HG002_chrY_T0000941;Name=FAM197Y5
HG002_chrY	CAT	exon	9731923	9732068	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_20;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_20;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000941;gene_id=HG002_chrY_G0000306;Parent=HG002_chrY_T0000941;transcript_name=HG002_chrY_T0000941;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000941:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9732069	9733604	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_20;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_20;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000941;gene_id=HG002_chrY_G0000306;Parent=HG002_chrY_T0000941;transcript_name=HG002_chrY_T0000941;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000941:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9733605	9733915	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_20;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_20;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000941;gene_id=HG002_chrY_G0000306;Parent=HG002_chrY_T0000941;transcript_name=HG002_chrY_T0000941;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000941:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9734873	9737678	.	+	.	source_gene_common_name=ENSG00000301844;source_gene=ENSG00000301844.1;gene_id=HG002_chrY_G0000307;gene_biotype=lncRNA;gene_name=ENSG00000301844;gene_sources=liftoff;ID=HG002_chrY_G0000307;Name=ENSG00000301844
HG002_chrY	CAT	transcript	9734873	9737678	1000	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000942;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_G0000307;transcript_name=HG002_chrY_T0000942;gene_name=ENSG00000301844;ID=HG002_chrY_T0000942;Name=ENSG00000301844
HG002_chrY	CAT	exon	9734873	9735401	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000942;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000942;transcript_name=HG002_chrY_T0000942;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000942:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9735402	9736008	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000942;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000942;transcript_name=HG002_chrY_T0000942;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000942:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9736009	9736086	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000942;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000942;transcript_name=HG002_chrY_T0000942;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000942:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9736087	9736214	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000942;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000942;transcript_name=HG002_chrY_T0000942;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000942:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9736215	9736326	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000942;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000942;transcript_name=HG002_chrY_T0000942;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000942:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9736327	9736427	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000942;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000942;transcript_name=HG002_chrY_T0000942;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000942:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9736428	9736573	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000942;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000942;transcript_name=HG002_chrY_T0000942;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000942:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9736574	9736679	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000942;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000942;transcript_name=HG002_chrY_T0000942;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000942:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9736680	9736761	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000942;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000942;transcript_name=HG002_chrY_T0000942;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000942:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9736762	9737455	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000942;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000942;transcript_name=HG002_chrY_T0000942;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000942:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9737456	9737678	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000942;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000942;transcript_name=HG002_chrY_T0000942;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000942:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9734882	9737673	1000	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000943;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_G0000307;transcript_name=HG002_chrY_T0000943;gene_name=ENSG00000301844;ID=HG002_chrY_T0000943;Name=ENSG00000301844
HG002_chrY	CAT	exon	9734882	9735401	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000943;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000943;transcript_name=HG002_chrY_T0000943;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000943:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9735402	9736008	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000943;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000943;transcript_name=HG002_chrY_T0000943;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000943:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9736009	9736086	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000943;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000943;transcript_name=HG002_chrY_T0000943;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000943:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9736087	9736214	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000943;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000943;transcript_name=HG002_chrY_T0000943;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000943:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9736215	9736326	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000943;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000943;transcript_name=HG002_chrY_T0000943;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000943:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9736327	9736434	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000943;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000943;transcript_name=HG002_chrY_T0000943;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000943:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9736435	9736573	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000943;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000943;transcript_name=HG002_chrY_T0000943;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000943:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9736574	9736679	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000943;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000943;transcript_name=HG002_chrY_T0000943;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000943:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9736680	9736761	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000943;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000943;transcript_name=HG002_chrY_T0000943;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000943:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9736762	9737455	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000943;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000943;transcript_name=HG002_chrY_T0000943;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000943:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9737456	9737673	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000943;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000943;transcript_name=HG002_chrY_T0000943;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000943:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9734904	9737668	1000	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000944;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_G0000307;transcript_name=HG002_chrY_T0000944;gene_name=ENSG00000301844;ID=HG002_chrY_T0000944;Name=ENSG00000301844
HG002_chrY	CAT	exon	9734904	9735401	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000944;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000944;transcript_name=HG002_chrY_T0000944;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000944:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9735402	9736008	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000944;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000944;transcript_name=HG002_chrY_T0000944;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000944:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9736009	9736086	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000944;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000944;transcript_name=HG002_chrY_T0000944;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000944:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9736087	9736214	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000944;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000944;transcript_name=HG002_chrY_T0000944;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000944:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9736215	9736326	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000944;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000944;transcript_name=HG002_chrY_T0000944;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000944:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9736327	9736427	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000944;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000944;transcript_name=HG002_chrY_T0000944;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000944:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9736428	9736761	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000944;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000944;transcript_name=HG002_chrY_T0000944;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000944:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9736762	9737455	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000944;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000944;transcript_name=HG002_chrY_T0000944;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000944:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9737456	9737668	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000944;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000944;transcript_name=HG002_chrY_T0000944;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000944:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9734914	9737673	1000	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000945;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_G0000307;transcript_name=HG002_chrY_T0000945;gene_name=ENSG00000301844;ID=HG002_chrY_T0000945;Name=ENSG00000301844
HG002_chrY	CAT	exon	9734914	9735401	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000945;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000945;transcript_name=HG002_chrY_T0000945;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000945:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9735402	9736008	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000945;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000945;transcript_name=HG002_chrY_T0000945;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000945:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9736009	9736086	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000945;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000945;transcript_name=HG002_chrY_T0000945;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000945:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9736087	9736214	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000945;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000945;transcript_name=HG002_chrY_T0000945;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000945:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9736215	9736573	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000945;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000945;transcript_name=HG002_chrY_T0000945;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000945:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9736574	9736679	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000945;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000945;transcript_name=HG002_chrY_T0000945;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000945:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9736680	9736761	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000945;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000945;transcript_name=HG002_chrY_T0000945;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000945:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9736762	9737455	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000945;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000945;transcript_name=HG002_chrY_T0000945;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000945:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9737456	9737673	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000945;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000945;transcript_name=HG002_chrY_T0000945;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000945:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9734916	9737673	1000	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000946;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_G0000307;transcript_name=HG002_chrY_T0000946;gene_name=ENSG00000301844;ID=HG002_chrY_T0000946;Name=ENSG00000301844
HG002_chrY	CAT	exon	9734916	9735401	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000946;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000946;transcript_name=HG002_chrY_T0000946;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000946:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9735402	9736008	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000946;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000946;transcript_name=HG002_chrY_T0000946;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000946:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9736009	9736086	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000946;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000946;transcript_name=HG002_chrY_T0000946;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000946:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9736087	9736214	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000946;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000946;transcript_name=HG002_chrY_T0000946;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000946:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9736215	9736326	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000946;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000946;transcript_name=HG002_chrY_T0000946;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000946:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9736327	9736427	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000946;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000946;transcript_name=HG002_chrY_T0000946;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000946:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9736428	9736573	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000946;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000946;transcript_name=HG002_chrY_T0000946;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000946:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9736574	9736668	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000946;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000946;transcript_name=HG002_chrY_T0000946;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000946:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9736669	9736761	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000946;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000946;transcript_name=HG002_chrY_T0000946;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000946:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9736762	9737455	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000946;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000946;transcript_name=HG002_chrY_T0000946;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000946:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9737456	9737673	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000946;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000946;transcript_name=HG002_chrY_T0000946;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000946:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9734916	9737666	1000	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000947;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_G0000307;transcript_name=HG002_chrY_T0000947;gene_name=ENSG00000301844;ID=HG002_chrY_T0000947;Name=ENSG00000301844
HG002_chrY	CAT	exon	9734916	9735401	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000947;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000947;transcript_name=HG002_chrY_T0000947;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000947:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9735402	9736008	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000947;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000947;transcript_name=HG002_chrY_T0000947;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000947:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9736009	9736086	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000947;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000947;transcript_name=HG002_chrY_T0000947;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000947:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9736087	9736214	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000947;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000947;transcript_name=HG002_chrY_T0000947;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000947:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9736215	9736761	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000947;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000947;transcript_name=HG002_chrY_T0000947;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000947:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9736762	9737455	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000947;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000947;transcript_name=HG002_chrY_T0000947;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000947:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9737456	9737666	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000947;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000947;transcript_name=HG002_chrY_T0000947;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000947:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9734936	9737673	1000	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000949;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_G0000307;transcript_name=HG002_chrY_T0000949;gene_name=ENSG00000301844;ID=HG002_chrY_T0000949;Name=ENSG00000301844
HG002_chrY	CAT	exon	9734936	9735401	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000949;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000949;transcript_name=HG002_chrY_T0000949;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000949:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9735402	9736008	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000949;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000949;transcript_name=HG002_chrY_T0000949;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000949:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9736009	9736086	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000949;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000949;transcript_name=HG002_chrY_T0000949;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000949:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9736087	9736214	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000949;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000949;transcript_name=HG002_chrY_T0000949;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000949:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9736215	9736573	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000949;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000949;transcript_name=HG002_chrY_T0000949;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000949:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9736574	9736668	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000949;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000949;transcript_name=HG002_chrY_T0000949;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000949:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9736669	9736761	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000949;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000949;transcript_name=HG002_chrY_T0000949;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000949:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9736762	9737455	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000949;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000949;transcript_name=HG002_chrY_T0000949;gene_name=ENSG00000301844;ID=intron:HG002_chrY_T0000949:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9737456	9737673	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG002_chrY_T0000949;gene_id=HG002_chrY_G0000307;Parent=HG002_chrY_T0000949;transcript_name=HG002_chrY_T0000949;gene_name=ENSG00000301844;ID=exon:HG002_chrY_T0000949:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9734916	9737666	.	+	.	source_gene_common_name=TSPY7P;source_gene=ENSG00000188656.8;gene_id=HG002_chrY_G0000308;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY7P;gene_sources=liftoff;ID=HG002_chrY_G0000308;Name=TSPY7P
HG002_chrY	CAT	transcript	9734916	9737666	1000	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000948;gene_id=HG002_chrY_G0000308;Parent=HG002_chrY_G0000308;transcript_name=HG002_chrY_T0000948;gene_name=TSPY7P;ID=HG002_chrY_T0000948;Name=TSPY7P
HG002_chrY	CAT	exon	9734916	9735401	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000948;gene_id=HG002_chrY_G0000308;Parent=HG002_chrY_T0000948;transcript_name=HG002_chrY_T0000948;gene_name=TSPY7P;ID=exon:HG002_chrY_T0000948:0;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9735402	9736008	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000948;gene_id=HG002_chrY_G0000308;Parent=HG002_chrY_T0000948;transcript_name=HG002_chrY_T0000948;gene_name=TSPY7P;ID=intron:HG002_chrY_T0000948:0;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9736009	9736086	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000948;gene_id=HG002_chrY_G0000308;Parent=HG002_chrY_T0000948;transcript_name=HG002_chrY_T0000948;gene_name=TSPY7P;ID=exon:HG002_chrY_T0000948:1;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9736087	9736214	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000948;gene_id=HG002_chrY_G0000308;Parent=HG002_chrY_T0000948;transcript_name=HG002_chrY_T0000948;gene_name=TSPY7P;ID=intron:HG002_chrY_T0000948:1;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9736215	9736326	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000948;gene_id=HG002_chrY_G0000308;Parent=HG002_chrY_T0000948;transcript_name=HG002_chrY_T0000948;gene_name=TSPY7P;ID=exon:HG002_chrY_T0000948:2;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9736327	9736427	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000948;gene_id=HG002_chrY_G0000308;Parent=HG002_chrY_T0000948;transcript_name=HG002_chrY_T0000948;gene_name=TSPY7P;ID=intron:HG002_chrY_T0000948:2;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9736428	9736573	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000948;gene_id=HG002_chrY_G0000308;Parent=HG002_chrY_T0000948;transcript_name=HG002_chrY_T0000948;gene_name=TSPY7P;ID=exon:HG002_chrY_T0000948:3;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9736574	9736679	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000948;gene_id=HG002_chrY_G0000308;Parent=HG002_chrY_T0000948;transcript_name=HG002_chrY_T0000948;gene_name=TSPY7P;ID=intron:HG002_chrY_T0000948:3;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9736680	9736761	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000948;gene_id=HG002_chrY_G0000308;Parent=HG002_chrY_T0000948;transcript_name=HG002_chrY_T0000948;gene_name=TSPY7P;ID=exon:HG002_chrY_T0000948:4;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9736762	9737455	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000948;gene_id=HG002_chrY_G0000308;Parent=HG002_chrY_T0000948;transcript_name=HG002_chrY_T0000948;gene_name=TSPY7P;ID=intron:HG002_chrY_T0000948:4;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9737456	9737666	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG002_chrY_T0000948;gene_id=HG002_chrY_G0000308;Parent=HG002_chrY_T0000948;transcript_name=HG002_chrY_T0000948;gene_name=TSPY7P;ID=exon:HG002_chrY_T0000948:5;Name=TSPY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9746841	9752579	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=HG002_chrY_G0000309;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000309;Name=FAM197Y5
HG002_chrY	CAT	transcript	9746841	9752579	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000950;gene_id=HG002_chrY_G0000309;Parent=HG002_chrY_G0000309;transcript_name=HG002_chrY_T0000950;gene_name=FAM197Y5;ID=HG002_chrY_T0000950;Name=FAM197Y5
HG002_chrY	CAT	exon	9746841	9747030	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000950;gene_id=HG002_chrY_G0000309;Parent=HG002_chrY_T0000950;transcript_name=HG002_chrY_T0000950;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000950:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9747031	9750580	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000950;gene_id=HG002_chrY_G0000309;Parent=HG002_chrY_T0000950;transcript_name=HG002_chrY_T0000950;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000950:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9750581	9750666	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000950;gene_id=HG002_chrY_G0000309;Parent=HG002_chrY_T0000950;transcript_name=HG002_chrY_T0000950;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000950:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9750667	9752465	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000950;gene_id=HG002_chrY_G0000309;Parent=HG002_chrY_T0000950;transcript_name=HG002_chrY_T0000950;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000950:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9752466	9752579	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000950;gene_id=HG002_chrY_G0000309;Parent=HG002_chrY_T0000950;transcript_name=HG002_chrY_T0000950;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000950:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9746971	9752567	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000951;gene_id=HG002_chrY_G0000309;Parent=HG002_chrY_G0000309;transcript_name=HG002_chrY_T0000951;gene_name=FAM197Y5;ID=HG002_chrY_T0000951;Name=FAM197Y5
HG002_chrY	CAT	exon	9746971	9747030	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000951;gene_id=HG002_chrY_G0000309;Parent=HG002_chrY_T0000951;transcript_name=HG002_chrY_T0000951;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000951:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9747031	9750580	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000951;gene_id=HG002_chrY_G0000309;Parent=HG002_chrY_T0000951;transcript_name=HG002_chrY_T0000951;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000951:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9750581	9750739	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000951;gene_id=HG002_chrY_G0000309;Parent=HG002_chrY_T0000951;transcript_name=HG002_chrY_T0000951;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000951:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9750740	9752233	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000951;gene_id=HG002_chrY_G0000309;Parent=HG002_chrY_T0000951;transcript_name=HG002_chrY_T0000951;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000951:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9752234	9752379	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000951;gene_id=HG002_chrY_G0000309;Parent=HG002_chrY_T0000951;transcript_name=HG002_chrY_T0000951;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000951:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9752380	9752465	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000951;gene_id=HG002_chrY_G0000309;Parent=HG002_chrY_T0000951;transcript_name=HG002_chrY_T0000951;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000951:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9752466	9752567	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000951;gene_id=HG002_chrY_G0000309;Parent=HG002_chrY_T0000951;transcript_name=HG002_chrY_T0000951;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000951:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9752234	9754226	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_8;gene_id=HG002_chrY_G0000310;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000310;Name=FAM197Y5
HG002_chrY	CAT	transcript	9752234	9754226	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000952;gene_id=HG002_chrY_G0000310;Parent=HG002_chrY_G0000310;transcript_name=HG002_chrY_T0000952;gene_name=FAM197Y5;ID=HG002_chrY_T0000952;Name=FAM197Y5
HG002_chrY	CAT	exon	9752234	9752379	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000952;gene_id=HG002_chrY_G0000310;Parent=HG002_chrY_T0000952;transcript_name=HG002_chrY_T0000952;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000952:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9752380	9753915	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000952;gene_id=HG002_chrY_G0000310;Parent=HG002_chrY_T0000952;transcript_name=HG002_chrY_T0000952;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000952:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9753916	9754226	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000952;gene_id=HG002_chrY_G0000310;Parent=HG002_chrY_T0000952;transcript_name=HG002_chrY_T0000952;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000952:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9755220	9757988	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1_5;gene_id=HG002_chrY_G0000311;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=HG002_chrY_G0000311;Name=ENSG00000293749
HG002_chrY	CAT	transcript	9755220	9757988	1000	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000953;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_G0000311;transcript_name=HG002_chrY_T0000953;gene_name=ENSG00000293749;ID=HG002_chrY_T0000953;Name=ENSG00000293749
HG002_chrY	CAT	exon	9755220	9755312	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000953;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000953;transcript_name=HG002_chrY_T0000953;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000953:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9755313	9755573	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000953;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000953;transcript_name=HG002_chrY_T0000953;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000953:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9755574	9755711	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000953;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000953;transcript_name=HG002_chrY_T0000953;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000953:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9755712	9756318	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000953;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000953;transcript_name=HG002_chrY_T0000953;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000953:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9756319	9756396	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000953;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000953;transcript_name=HG002_chrY_T0000953;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000953:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9756397	9756524	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000953;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000953;transcript_name=HG002_chrY_T0000953;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000953:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9756525	9756636	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000953;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000953;transcript_name=HG002_chrY_T0000953;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000953:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9756637	9756737	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000953;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000953;transcript_name=HG002_chrY_T0000953;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000953:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9756738	9756883	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000953;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000953;transcript_name=HG002_chrY_T0000953;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000953:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9756884	9756989	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000953;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000953;transcript_name=HG002_chrY_T0000953;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000953:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9756990	9757071	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000953;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000953;transcript_name=HG002_chrY_T0000953;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000953:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9757072	9757765	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000953;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000953;transcript_name=HG002_chrY_T0000953;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000953:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9757766	9757988	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000953;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000953;transcript_name=HG002_chrY_T0000953;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000953:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9755232	9757976	1000	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000955;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_G0000311;transcript_name=HG002_chrY_T0000955;gene_name=ENSG00000293749;ID=HG002_chrY_T0000955;Name=ENSG00000293749
HG002_chrY	CAT	exon	9755232	9755312	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000955;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000955;transcript_name=HG002_chrY_T0000955;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000955:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9755313	9755573	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000955;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000955;transcript_name=HG002_chrY_T0000955;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000955:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9755574	9755711	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000955;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000955;transcript_name=HG002_chrY_T0000955;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000955:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9755712	9756318	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000955;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000955;transcript_name=HG002_chrY_T0000955;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000955:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9756319	9756396	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000955;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000955;transcript_name=HG002_chrY_T0000955;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000955:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9756397	9756524	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000955;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000955;transcript_name=HG002_chrY_T0000955;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000955:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9756525	9756636	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000955;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000955;transcript_name=HG002_chrY_T0000955;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000955:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9756637	9756744	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000955;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000955;transcript_name=HG002_chrY_T0000955;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000955:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9756745	9756883	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000955;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000955;transcript_name=HG002_chrY_T0000955;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000955:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9756884	9756989	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000955;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000955;transcript_name=HG002_chrY_T0000955;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000955:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9756990	9757071	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000955;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000955;transcript_name=HG002_chrY_T0000955;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000955:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9757072	9757765	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000955;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000955;transcript_name=HG002_chrY_T0000955;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000955:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9757766	9757976	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000955;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000955;transcript_name=HG002_chrY_T0000955;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000955:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9755241	9757983	1000	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000956;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_G0000311;transcript_name=HG002_chrY_T0000956;gene_name=ENSG00000293749;ID=HG002_chrY_T0000956;Name=ENSG00000293749
HG002_chrY	CAT	exon	9755241	9755312	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000956;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000956;transcript_name=HG002_chrY_T0000956;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000956:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9755313	9755573	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000956;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000956;transcript_name=HG002_chrY_T0000956;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000956:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9755574	9755711	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000956;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000956;transcript_name=HG002_chrY_T0000956;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000956:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9755712	9756318	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000956;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000956;transcript_name=HG002_chrY_T0000956;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000956:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9756319	9756396	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000956;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000956;transcript_name=HG002_chrY_T0000956;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000956:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9756397	9756524	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000956;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000956;transcript_name=HG002_chrY_T0000956;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000956:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9756525	9756636	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000956;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000956;transcript_name=HG002_chrY_T0000956;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000956:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9756637	9756737	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000956;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000956;transcript_name=HG002_chrY_T0000956;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000956:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9756738	9756883	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000956;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000956;transcript_name=HG002_chrY_T0000956;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000956:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9756884	9756978	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000956;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000956;transcript_name=HG002_chrY_T0000956;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000956:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9756979	9757071	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000956;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000956;transcript_name=HG002_chrY_T0000956;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000956:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9757072	9757765	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000956;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000956;transcript_name=HG002_chrY_T0000956;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000956:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9757766	9757983	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000956;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000956;transcript_name=HG002_chrY_T0000956;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000956:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9755443	9757981	1000	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000957;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_G0000311;transcript_name=HG002_chrY_T0000957;gene_name=ENSG00000293749;ID=HG002_chrY_T0000957;Name=ENSG00000293749
HG002_chrY	CAT	exon	9755443	9755711	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000957;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000957;transcript_name=HG002_chrY_T0000957;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000957:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9755712	9756318	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000957;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000957;transcript_name=HG002_chrY_T0000957;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000957:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9756319	9756396	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000957;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000957;transcript_name=HG002_chrY_T0000957;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000957:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9756397	9756524	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000957;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000957;transcript_name=HG002_chrY_T0000957;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000957:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9756525	9756636	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000957;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000957;transcript_name=HG002_chrY_T0000957;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000957:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9756637	9756737	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000957;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000957;transcript_name=HG002_chrY_T0000957;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000957:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9756738	9756883	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000957;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000957;transcript_name=HG002_chrY_T0000957;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000957:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9756884	9756989	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000957;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000957;transcript_name=HG002_chrY_T0000957;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000957:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9756990	9757071	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000957;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000957;transcript_name=HG002_chrY_T0000957;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000957:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9757072	9757765	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000957;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000957;transcript_name=HG002_chrY_T0000957;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000957:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9757766	9757981	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000957;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000957;transcript_name=HG002_chrY_T0000957;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000957:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9755539	9757976	1000	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000958;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_G0000311;transcript_name=HG002_chrY_T0000958;gene_name=ENSG00000293749;ID=HG002_chrY_T0000958;Name=ENSG00000293749
HG002_chrY	CAT	exon	9755539	9755711	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000958;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000958;transcript_name=HG002_chrY_T0000958;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000958:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9755712	9756318	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000958;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000958;transcript_name=HG002_chrY_T0000958;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000958:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9756319	9756396	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000958;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000958;transcript_name=HG002_chrY_T0000958;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000958:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9756397	9756524	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000958;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000958;transcript_name=HG002_chrY_T0000958;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000958:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9756525	9756636	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000958;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000958;transcript_name=HG002_chrY_T0000958;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000958:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9756637	9756744	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000958;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000958;transcript_name=HG002_chrY_T0000958;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000958:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9756745	9756883	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000958;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000958;transcript_name=HG002_chrY_T0000958;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000958:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9756884	9756989	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000958;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000958;transcript_name=HG002_chrY_T0000958;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000958:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9756990	9757071	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000958;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000958;transcript_name=HG002_chrY_T0000958;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000958:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9757072	9757765	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000958;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000958;transcript_name=HG002_chrY_T0000958;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000958:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9757766	9757976	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000958;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000958;transcript_name=HG002_chrY_T0000958;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000958:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9755665	9757987	1000	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000959;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_G0000311;transcript_name=HG002_chrY_T0000959;gene_name=ENSG00000293749;ID=HG002_chrY_T0000959;Name=ENSG00000293749
HG002_chrY	CAT	exon	9755665	9755767	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000959;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000959;transcript_name=HG002_chrY_T0000959;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000959:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9755768	9756336	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000959;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000959;transcript_name=HG002_chrY_T0000959;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000959:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9756337	9756396	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000959;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000959;transcript_name=HG002_chrY_T0000959;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000959:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9756397	9756524	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000959;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000959;transcript_name=HG002_chrY_T0000959;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000959:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9756525	9756636	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000959;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000959;transcript_name=HG002_chrY_T0000959;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000959:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9756637	9756737	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000959;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000959;transcript_name=HG002_chrY_T0000959;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000959:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9756738	9756883	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000959;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000959;transcript_name=HG002_chrY_T0000959;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000959:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9756884	9756989	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000959;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000959;transcript_name=HG002_chrY_T0000959;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000959:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9756990	9757071	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000959;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000959;transcript_name=HG002_chrY_T0000959;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000959:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9757072	9757765	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000959;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000959;transcript_name=HG002_chrY_T0000959;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000959:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9757766	9757987	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000959;gene_id=HG002_chrY_G0000311;Parent=HG002_chrY_T0000959;transcript_name=HG002_chrY_T0000959;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000959:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9755226	9757788	.	+	.	source_gene_common_name=TSPY6P;source_gene=ENSG00000270073.1_5;gene_id=HG002_chrY_G0000312;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY6P;gene_sources=liftoff;ID=HG002_chrY_G0000312;Name=TSPY6P
HG002_chrY	CAT	transcript	9755226	9757788	1000	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000954;gene_id=HG002_chrY_G0000312;Parent=HG002_chrY_G0000312;transcript_name=HG002_chrY_T0000954;gene_name=TSPY6P;ID=HG002_chrY_T0000954;Name=TSPY6P
HG002_chrY	CAT	exon	9755226	9755436	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000954;gene_id=HG002_chrY_G0000312;Parent=HG002_chrY_T0000954;transcript_name=HG002_chrY_T0000954;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000954:0;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9755437	9755444	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000954;gene_id=HG002_chrY_G0000312;Parent=HG002_chrY_T0000954;transcript_name=HG002_chrY_T0000954;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000954:0;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9755445	9755711	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000954;gene_id=HG002_chrY_G0000312;Parent=HG002_chrY_T0000954;transcript_name=HG002_chrY_T0000954;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000954:1;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9755712	9756318	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000954;gene_id=HG002_chrY_G0000312;Parent=HG002_chrY_T0000954;transcript_name=HG002_chrY_T0000954;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000954:1;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9756319	9756396	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000954;gene_id=HG002_chrY_G0000312;Parent=HG002_chrY_T0000954;transcript_name=HG002_chrY_T0000954;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000954:2;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9756397	9756524	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000954;gene_id=HG002_chrY_G0000312;Parent=HG002_chrY_T0000954;transcript_name=HG002_chrY_T0000954;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000954:2;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9756525	9756636	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000954;gene_id=HG002_chrY_G0000312;Parent=HG002_chrY_T0000954;transcript_name=HG002_chrY_T0000954;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000954:3;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9756637	9756737	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000954;gene_id=HG002_chrY_G0000312;Parent=HG002_chrY_T0000954;transcript_name=HG002_chrY_T0000954;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000954:3;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9756738	9756883	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000954;gene_id=HG002_chrY_G0000312;Parent=HG002_chrY_T0000954;transcript_name=HG002_chrY_T0000954;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000954:4;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9756884	9756989	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000954;gene_id=HG002_chrY_G0000312;Parent=HG002_chrY_T0000954;transcript_name=HG002_chrY_T0000954;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000954:4;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9756990	9757071	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000954;gene_id=HG002_chrY_G0000312;Parent=HG002_chrY_T0000954;transcript_name=HG002_chrY_T0000954;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000954:5;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9757072	9757765	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000954;gene_id=HG002_chrY_G0000312;Parent=HG002_chrY_T0000954;transcript_name=HG002_chrY_T0000954;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000954:5;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9757766	9757788	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000954;gene_id=HG002_chrY_G0000312;Parent=HG002_chrY_T0000954;transcript_name=HG002_chrY_T0000954;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000954:6;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9756366	9757983	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1;gene_id=HG002_chrY_G0000313;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=HG002_chrY_G0000313;Name=ENSG00000293749
HG002_chrY	CAT	transcript	9756366	9757974	1000	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000960;gene_id=HG002_chrY_G0000313;Parent=HG002_chrY_G0000313;transcript_name=HG002_chrY_T0000960;gene_name=ENSG00000293749;ID=HG002_chrY_T0000960;Name=ENSG00000293749
HG002_chrY	CAT	exon	9756366	9756396	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000960;gene_id=HG002_chrY_G0000313;Parent=HG002_chrY_T0000960;transcript_name=HG002_chrY_T0000960;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000960:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9756397	9756524	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000960;gene_id=HG002_chrY_G0000313;Parent=HG002_chrY_T0000960;transcript_name=HG002_chrY_T0000960;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000960:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9756525	9756883	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000960;gene_id=HG002_chrY_G0000313;Parent=HG002_chrY_T0000960;transcript_name=HG002_chrY_T0000960;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000960:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9756884	9756989	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000960;gene_id=HG002_chrY_G0000313;Parent=HG002_chrY_T0000960;transcript_name=HG002_chrY_T0000960;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000960:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9756990	9757071	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000960;gene_id=HG002_chrY_G0000313;Parent=HG002_chrY_T0000960;transcript_name=HG002_chrY_T0000960;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000960:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9757072	9757765	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000960;gene_id=HG002_chrY_G0000313;Parent=HG002_chrY_T0000960;transcript_name=HG002_chrY_T0000960;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000960:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9757766	9757974	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000960;gene_id=HG002_chrY_G0000313;Parent=HG002_chrY_T0000960;transcript_name=HG002_chrY_T0000960;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000960:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9756911	9757983	1000	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000961;gene_id=HG002_chrY_G0000313;Parent=HG002_chrY_G0000313;transcript_name=HG002_chrY_T0000961;gene_name=ENSG00000293749;ID=HG002_chrY_T0000961;Name=ENSG00000293749
HG002_chrY	CAT	exon	9756911	9757071	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000961;gene_id=HG002_chrY_G0000313;Parent=HG002_chrY_T0000961;transcript_name=HG002_chrY_T0000961;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000961:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9757072	9757765	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000961;gene_id=HG002_chrY_G0000313;Parent=HG002_chrY_T0000961;transcript_name=HG002_chrY_T0000961;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000961:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9757766	9757983	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000961;gene_id=HG002_chrY_G0000313;Parent=HG002_chrY_T0000961;transcript_name=HG002_chrY_T0000961;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000961:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9767118	9772856	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=HG002_chrY_G0000314;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000314;Name=FAM197Y5
HG002_chrY	CAT	transcript	9767118	9772856	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000962;gene_id=HG002_chrY_G0000314;Parent=HG002_chrY_G0000314;transcript_name=HG002_chrY_T0000962;gene_name=FAM197Y5;ID=HG002_chrY_T0000962;Name=FAM197Y5
HG002_chrY	CAT	exon	9767118	9767307	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000962;gene_id=HG002_chrY_G0000314;Parent=HG002_chrY_T0000962;transcript_name=HG002_chrY_T0000962;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000962:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9767308	9770857	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000962;gene_id=HG002_chrY_G0000314;Parent=HG002_chrY_T0000962;transcript_name=HG002_chrY_T0000962;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000962:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9770858	9770943	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000962;gene_id=HG002_chrY_G0000314;Parent=HG002_chrY_T0000962;transcript_name=HG002_chrY_T0000962;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000962:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9770944	9772742	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000962;gene_id=HG002_chrY_G0000314;Parent=HG002_chrY_T0000962;transcript_name=HG002_chrY_T0000962;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000962:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9772743	9772856	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000962;gene_id=HG002_chrY_G0000314;Parent=HG002_chrY_T0000962;transcript_name=HG002_chrY_T0000962;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000962:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9767248	9772844	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000963;gene_id=HG002_chrY_G0000314;Parent=HG002_chrY_G0000314;transcript_name=HG002_chrY_T0000963;gene_name=FAM197Y5;ID=HG002_chrY_T0000963;Name=FAM197Y5
HG002_chrY	CAT	exon	9767248	9767307	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000963;gene_id=HG002_chrY_G0000314;Parent=HG002_chrY_T0000963;transcript_name=HG002_chrY_T0000963;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000963:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9767308	9770857	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000963;gene_id=HG002_chrY_G0000314;Parent=HG002_chrY_T0000963;transcript_name=HG002_chrY_T0000963;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000963:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9770858	9771016	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000963;gene_id=HG002_chrY_G0000314;Parent=HG002_chrY_T0000963;transcript_name=HG002_chrY_T0000963;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000963:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9771017	9772510	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000963;gene_id=HG002_chrY_G0000314;Parent=HG002_chrY_T0000963;transcript_name=HG002_chrY_T0000963;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000963:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9772511	9772656	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000963;gene_id=HG002_chrY_G0000314;Parent=HG002_chrY_T0000963;transcript_name=HG002_chrY_T0000963;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000963:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9772657	9772742	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000963;gene_id=HG002_chrY_G0000314;Parent=HG002_chrY_T0000963;transcript_name=HG002_chrY_T0000963;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000963:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9772743	9772844	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000963;gene_id=HG002_chrY_G0000314;Parent=HG002_chrY_T0000963;transcript_name=HG002_chrY_T0000963;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000963:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9772511	9774503	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_19;gene_id=HG002_chrY_G0000315;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000315;Name=FAM197Y5
HG002_chrY	CAT	transcript	9772511	9774503	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_19;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_19;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000964;gene_id=HG002_chrY_G0000315;Parent=HG002_chrY_G0000315;transcript_name=HG002_chrY_T0000964;gene_name=FAM197Y5;ID=HG002_chrY_T0000964;Name=FAM197Y5
HG002_chrY	CAT	exon	9772511	9772656	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_19;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_19;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000964;gene_id=HG002_chrY_G0000315;Parent=HG002_chrY_T0000964;transcript_name=HG002_chrY_T0000964;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000964:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9772657	9774192	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_19;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_19;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000964;gene_id=HG002_chrY_G0000315;Parent=HG002_chrY_T0000964;transcript_name=HG002_chrY_T0000964;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000964:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9774193	9774503	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_19;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_19;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000964;gene_id=HG002_chrY_G0000315;Parent=HG002_chrY_T0000964;transcript_name=HG002_chrY_T0000964;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000964:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9775457	9778254	.	+	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;gene_id=HG002_chrY_G0000316;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=HG002_chrY_G0000316;Name=TSPY3
HG002_chrY	CAT	transcript	9775457	9778254	100	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000965;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_G0000316;transcript_name=HG002_chrY_T0000965;gene_name=TSPY3;ID=HG002_chrY_T0000965;Name=TSPY3
HG002_chrY	CAT	exon	9775457	9775988	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000965;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000965;transcript_name=HG002_chrY_T0000965;gene_name=TSPY3;ID=exon:HG002_chrY_T0000965:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9775503	9775988	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000965;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000965;transcript_name=HG002_chrY_T0000965;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000965:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9775503	9775505	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000965;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000965;transcript_name=HG002_chrY_T0000965;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000965;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9775989	9776595	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000965;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000965;transcript_name=HG002_chrY_T0000965;gene_name=TSPY3;ID=intron:HG002_chrY_T0000965:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9776596	9776673	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000965;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000965;transcript_name=HG002_chrY_T0000965;gene_name=TSPY3;ID=exon:HG002_chrY_T0000965:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9776596	9776673	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000965;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000965;transcript_name=HG002_chrY_T0000965;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000965:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9776674	9776801	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000965;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000965;transcript_name=HG002_chrY_T0000965;gene_name=TSPY3;ID=intron:HG002_chrY_T0000965:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9776802	9776913	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000965;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000965;transcript_name=HG002_chrY_T0000965;gene_name=TSPY3;ID=exon:HG002_chrY_T0000965:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9776802	9776913	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000965;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000965;transcript_name=HG002_chrY_T0000965;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000965:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9776914	9777014	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000965;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000965;transcript_name=HG002_chrY_T0000965;gene_name=TSPY3;ID=intron:HG002_chrY_T0000965:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9777015	9777160	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000965;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000965;transcript_name=HG002_chrY_T0000965;gene_name=TSPY3;ID=exon:HG002_chrY_T0000965:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9777015	9777160	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000965;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000965;transcript_name=HG002_chrY_T0000965;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000965:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9777161	9777266	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000965;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000965;transcript_name=HG002_chrY_T0000965;gene_name=TSPY3;ID=intron:HG002_chrY_T0000965:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9777267	9777348	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000965;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000965;transcript_name=HG002_chrY_T0000965;gene_name=TSPY3;ID=exon:HG002_chrY_T0000965:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9777267	9777348	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000965;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000965;transcript_name=HG002_chrY_T0000965;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000965:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9777349	9778042	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000965;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000965;transcript_name=HG002_chrY_T0000965;gene_name=TSPY3;ID=intron:HG002_chrY_T0000965:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9778043	9778254	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000965;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000965;transcript_name=HG002_chrY_T0000965;gene_name=TSPY3;ID=exon:HG002_chrY_T0000965:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9778043	9778065	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000965;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000965;transcript_name=HG002_chrY_T0000965;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000965:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9778063	9778065	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000965;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000965;transcript_name=HG002_chrY_T0000965;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000965;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9775503	9778253	100	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000966;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_G0000316;transcript_name=HG002_chrY_T0000966;gene_name=TSPY3;ID=HG002_chrY_T0000966;Name=TSPY3
HG002_chrY	CAT	exon	9775503	9775988	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000966;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000966;transcript_name=HG002_chrY_T0000966;gene_name=TSPY3;ID=exon:HG002_chrY_T0000966:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9775503	9775988	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000966;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000966;transcript_name=HG002_chrY_T0000966;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000966:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9775503	9775505	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000966;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000966;transcript_name=HG002_chrY_T0000966;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000966;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9775989	9776595	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000966;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000966;transcript_name=HG002_chrY_T0000966;gene_name=TSPY3;ID=intron:HG002_chrY_T0000966:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9776596	9776673	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000966;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000966;transcript_name=HG002_chrY_T0000966;gene_name=TSPY3;ID=exon:HG002_chrY_T0000966:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9776596	9776673	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000966;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000966;transcript_name=HG002_chrY_T0000966;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000966:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9776674	9776801	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000966;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000966;transcript_name=HG002_chrY_T0000966;gene_name=TSPY3;ID=intron:HG002_chrY_T0000966:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9776802	9776913	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000966;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000966;transcript_name=HG002_chrY_T0000966;gene_name=TSPY3;ID=exon:HG002_chrY_T0000966:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9776802	9776913	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000966;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000966;transcript_name=HG002_chrY_T0000966;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000966:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9776914	9777014	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000966;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000966;transcript_name=HG002_chrY_T0000966;gene_name=TSPY3;ID=intron:HG002_chrY_T0000966:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9777015	9777160	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000966;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000966;transcript_name=HG002_chrY_T0000966;gene_name=TSPY3;ID=exon:HG002_chrY_T0000966:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9777015	9777160	.	+	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000966;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000966;transcript_name=HG002_chrY_T0000966;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000966:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9777161	9777255	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000966;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000966;transcript_name=HG002_chrY_T0000966;gene_name=TSPY3;ID=intron:HG002_chrY_T0000966:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9777256	9777348	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000966;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000966;transcript_name=HG002_chrY_T0000966;gene_name=TSPY3;ID=exon:HG002_chrY_T0000966:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9777256	9777318	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000966;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000966;transcript_name=HG002_chrY_T0000966;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000966:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9777316	9777318	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000966;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000966;transcript_name=HG002_chrY_T0000966;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000966;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9777349	9778042	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000966;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000966;transcript_name=HG002_chrY_T0000966;gene_name=TSPY3;ID=intron:HG002_chrY_T0000966:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9778043	9778253	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000966;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000966;transcript_name=HG002_chrY_T0000966;gene_name=TSPY3;ID=exon:HG002_chrY_T0000966:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9775503	9778065	100	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000967;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_G0000316;transcript_name=HG002_chrY_T0000967;gene_name=TSPY3;ID=HG002_chrY_T0000967;Name=TSPY3
HG002_chrY	CAT	exon	9775503	9775589	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000967;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000967;transcript_name=HG002_chrY_T0000967;gene_name=TSPY3;ID=exon:HG002_chrY_T0000967:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9775503	9775589	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000967;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000967;transcript_name=HG002_chrY_T0000967;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000967:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9775503	9775505	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000967;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000967;transcript_name=HG002_chrY_T0000967;gene_name=TSPY3;ID=start_codon:HG002_chrY_T0000967;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9775590	9775850	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000967;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000967;transcript_name=HG002_chrY_T0000967;gene_name=TSPY3;ID=intron:HG002_chrY_T0000967:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9775851	9775988	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000967;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000967;transcript_name=HG002_chrY_T0000967;gene_name=TSPY3;ID=exon:HG002_chrY_T0000967:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9775851	9775988	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000967;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000967;transcript_name=HG002_chrY_T0000967;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000967:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9775989	9776595	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000967;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000967;transcript_name=HG002_chrY_T0000967;gene_name=TSPY3;ID=intron:HG002_chrY_T0000967:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9776596	9776673	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000967;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000967;transcript_name=HG002_chrY_T0000967;gene_name=TSPY3;ID=exon:HG002_chrY_T0000967:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9776596	9776673	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000967;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000967;transcript_name=HG002_chrY_T0000967;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000967:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9776674	9776801	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000967;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000967;transcript_name=HG002_chrY_T0000967;gene_name=TSPY3;ID=intron:HG002_chrY_T0000967:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9776802	9776913	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000967;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000967;transcript_name=HG002_chrY_T0000967;gene_name=TSPY3;ID=exon:HG002_chrY_T0000967:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9776802	9776913	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000967;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000967;transcript_name=HG002_chrY_T0000967;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000967:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9776914	9777014	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000967;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000967;transcript_name=HG002_chrY_T0000967;gene_name=TSPY3;ID=intron:HG002_chrY_T0000967:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9777015	9777160	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000967;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000967;transcript_name=HG002_chrY_T0000967;gene_name=TSPY3;ID=exon:HG002_chrY_T0000967:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9777015	9777160	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000967;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000967;transcript_name=HG002_chrY_T0000967;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000967:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9777161	9777266	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000967;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000967;transcript_name=HG002_chrY_T0000967;gene_name=TSPY3;ID=intron:HG002_chrY_T0000967:4;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9777267	9777348	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000967;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000967;transcript_name=HG002_chrY_T0000967;gene_name=TSPY3;ID=exon:HG002_chrY_T0000967:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9777267	9777348	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000967;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000967;transcript_name=HG002_chrY_T0000967;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000967:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9777349	9778042	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000967;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000967;transcript_name=HG002_chrY_T0000967;gene_name=TSPY3;ID=intron:HG002_chrY_T0000967:5;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9778043	9778065	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000967;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000967;transcript_name=HG002_chrY_T0000967;gene_name=TSPY3;ID=exon:HG002_chrY_T0000967:6;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9778043	9778065	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000967;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000967;transcript_name=HG002_chrY_T0000967;gene_name=TSPY3;ID=CDS:HG002_chrY_T0000967:6;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9778063	9778065	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000967;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000967;transcript_name=HG002_chrY_T0000967;gene_name=TSPY3;ID=stop_codon:HG002_chrY_T0000967;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9775503	9778260	1000	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000968;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_G0000316;transcript_name=HG002_chrY_T0000968;gene_name=TSPY3;ID=HG002_chrY_T0000968;Name=TSPY3
HG002_chrY	CAT	exon	9775503	9775988	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000968;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000968;transcript_name=HG002_chrY_T0000968;gene_name=TSPY3;ID=exon:HG002_chrY_T0000968:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9775989	9776595	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000968;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000968;transcript_name=HG002_chrY_T0000968;gene_name=TSPY3;ID=intron:HG002_chrY_T0000968:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9776596	9776673	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000968;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000968;transcript_name=HG002_chrY_T0000968;gene_name=TSPY3;ID=exon:HG002_chrY_T0000968:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9776674	9776801	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000968;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000968;transcript_name=HG002_chrY_T0000968;gene_name=TSPY3;ID=intron:HG002_chrY_T0000968:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9776802	9777348	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000968;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000968;transcript_name=HG002_chrY_T0000968;gene_name=TSPY3;ID=exon:HG002_chrY_T0000968:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9777349	9777475	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000968;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000968;transcript_name=HG002_chrY_T0000968;gene_name=TSPY3;ID=intron:HG002_chrY_T0000968:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9777476	9778260	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000968;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000968;transcript_name=HG002_chrY_T0000968;gene_name=TSPY3;ID=exon:HG002_chrY_T0000968:3;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9776863	9778245	1000	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000969;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_G0000316;transcript_name=HG002_chrY_T0000969;gene_name=TSPY3;ID=HG002_chrY_T0000969;Name=TSPY3
HG002_chrY	CAT	exon	9776863	9777160	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000969;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000969;transcript_name=HG002_chrY_T0000969;gene_name=TSPY3;ID=exon:HG002_chrY_T0000969:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9777161	9777255	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000969;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000969;transcript_name=HG002_chrY_T0000969;gene_name=TSPY3;ID=intron:HG002_chrY_T0000969:0;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9777256	9777348	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000969;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000969;transcript_name=HG002_chrY_T0000969;gene_name=TSPY3;ID=exon:HG002_chrY_T0000969:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9777349	9778042	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000969;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000969;transcript_name=HG002_chrY_T0000969;gene_name=TSPY3;ID=intron:HG002_chrY_T0000969:1;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9778043	9778245	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG002_chrY_T0000969;gene_id=HG002_chrY_G0000316;Parent=HG002_chrY_T0000969;transcript_name=HG002_chrY_T0000969;gene_name=TSPY3;ID=exon:HG002_chrY_T0000969:2;Name=TSPY3;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9787418	9793164	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=HG002_chrY_G0000317;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000317;Name=FAM197Y5
HG002_chrY	CAT	transcript	9787418	9793164	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000970;gene_id=HG002_chrY_G0000317;Parent=HG002_chrY_G0000317;transcript_name=HG002_chrY_T0000970;gene_name=FAM197Y5;ID=HG002_chrY_T0000970;Name=FAM197Y5
HG002_chrY	CAT	exon	9787418	9787607	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000970;gene_id=HG002_chrY_G0000317;Parent=HG002_chrY_T0000970;transcript_name=HG002_chrY_T0000970;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000970:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9787608	9791157	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000970;gene_id=HG002_chrY_G0000317;Parent=HG002_chrY_T0000970;transcript_name=HG002_chrY_T0000970;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000970:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9791158	9791243	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000970;gene_id=HG002_chrY_G0000317;Parent=HG002_chrY_T0000970;transcript_name=HG002_chrY_T0000970;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000970:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9791244	9793050	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000970;gene_id=HG002_chrY_G0000317;Parent=HG002_chrY_T0000970;transcript_name=HG002_chrY_T0000970;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000970:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9793051	9793164	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000970;gene_id=HG002_chrY_G0000317;Parent=HG002_chrY_T0000970;transcript_name=HG002_chrY_T0000970;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000970:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9787548	9793152	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000971;gene_id=HG002_chrY_G0000317;Parent=HG002_chrY_G0000317;transcript_name=HG002_chrY_T0000971;gene_name=FAM197Y5;ID=HG002_chrY_T0000971;Name=FAM197Y5
HG002_chrY	CAT	exon	9787548	9787607	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000971;gene_id=HG002_chrY_G0000317;Parent=HG002_chrY_T0000971;transcript_name=HG002_chrY_T0000971;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000971:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9787608	9791157	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000971;gene_id=HG002_chrY_G0000317;Parent=HG002_chrY_T0000971;transcript_name=HG002_chrY_T0000971;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000971:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9791158	9791316	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000971;gene_id=HG002_chrY_G0000317;Parent=HG002_chrY_T0000971;transcript_name=HG002_chrY_T0000971;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000971:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9791317	9792818	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000971;gene_id=HG002_chrY_G0000317;Parent=HG002_chrY_T0000971;transcript_name=HG002_chrY_T0000971;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000971:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9792819	9792964	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000971;gene_id=HG002_chrY_G0000317;Parent=HG002_chrY_T0000971;transcript_name=HG002_chrY_T0000971;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000971:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9792965	9793050	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000971;gene_id=HG002_chrY_G0000317;Parent=HG002_chrY_T0000971;transcript_name=HG002_chrY_T0000971;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000971:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9793051	9793152	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000971;gene_id=HG002_chrY_G0000317;Parent=HG002_chrY_T0000971;transcript_name=HG002_chrY_T0000971;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000971:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9792819	9794811	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8;gene_id=HG002_chrY_G0000318;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG002_chrY_G0000318;Name=FAM197Y5
HG002_chrY	CAT	transcript	9792819	9794811	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000972;gene_id=HG002_chrY_G0000318;Parent=HG002_chrY_G0000318;transcript_name=HG002_chrY_T0000972;gene_name=FAM197Y5;ID=HG002_chrY_T0000972;Name=FAM197Y5
HG002_chrY	CAT	exon	9792819	9792964	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000972;gene_id=HG002_chrY_G0000318;Parent=HG002_chrY_T0000972;transcript_name=HG002_chrY_T0000972;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000972:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9792965	9794500	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000972;gene_id=HG002_chrY_G0000318;Parent=HG002_chrY_T0000972;transcript_name=HG002_chrY_T0000972;gene_name=FAM197Y5;ID=intron:HG002_chrY_T0000972:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9794501	9794811	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG002_chrY_T0000972;gene_id=HG002_chrY_G0000318;Parent=HG002_chrY_T0000972;transcript_name=HG002_chrY_T0000972;gene_name=FAM197Y5;ID=exon:HG002_chrY_T0000972:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9795765	9798561	.	+	.	source_gene_common_name=TSPY10;source_gene=ENSG00000236424.7;gene_id=HG002_chrY_G0000319;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG002_chrY_G0000319;Name=TSPY10
HG002_chrY	CAT	transcript	9795765	9798561	100	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000973;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_G0000319;transcript_name=HG002_chrY_T0000973;gene_name=TSPY10;ID=HG002_chrY_T0000973;Name=TSPY10
HG002_chrY	CAT	exon	9795765	9796296	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000973;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000973;transcript_name=HG002_chrY_T0000973;gene_name=TSPY10;ID=exon:HG002_chrY_T0000973:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9795811	9796296	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000973;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000973;transcript_name=HG002_chrY_T0000973;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000973:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9795811	9795813	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000973;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000973;transcript_name=HG002_chrY_T0000973;gene_name=TSPY10;ID=start_codon:HG002_chrY_T0000973;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9796297	9796903	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000973;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000973;transcript_name=HG002_chrY_T0000973;gene_name=TSPY10;ID=intron:HG002_chrY_T0000973:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9796904	9796981	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000973;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000973;transcript_name=HG002_chrY_T0000973;gene_name=TSPY10;ID=exon:HG002_chrY_T0000973:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9796904	9796981	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000973;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000973;transcript_name=HG002_chrY_T0000973;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000973:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9796982	9797109	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000973;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000973;transcript_name=HG002_chrY_T0000973;gene_name=TSPY10;ID=intron:HG002_chrY_T0000973:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9797110	9797221	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000973;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000973;transcript_name=HG002_chrY_T0000973;gene_name=TSPY10;ID=exon:HG002_chrY_T0000973:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9797110	9797221	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000973;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000973;transcript_name=HG002_chrY_T0000973;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000973:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9797222	9797322	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000973;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000973;transcript_name=HG002_chrY_T0000973;gene_name=TSPY10;ID=intron:HG002_chrY_T0000973:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9797323	9797468	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000973;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000973;transcript_name=HG002_chrY_T0000973;gene_name=TSPY10;ID=exon:HG002_chrY_T0000973:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9797323	9797468	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000973;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000973;transcript_name=HG002_chrY_T0000973;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000973:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9797469	9797574	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000973;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000973;transcript_name=HG002_chrY_T0000973;gene_name=TSPY10;ID=intron:HG002_chrY_T0000973:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9797575	9797656	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000973;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000973;transcript_name=HG002_chrY_T0000973;gene_name=TSPY10;ID=exon:HG002_chrY_T0000973:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9797575	9797656	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000973;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000973;transcript_name=HG002_chrY_T0000973;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000973:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9797657	9798350	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000973;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000973;transcript_name=HG002_chrY_T0000973;gene_name=TSPY10;ID=intron:HG002_chrY_T0000973:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9798351	9798561	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000973;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000973;transcript_name=HG002_chrY_T0000973;gene_name=TSPY10;ID=exon:HG002_chrY_T0000973:5;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9798351	9798373	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000973;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000973;transcript_name=HG002_chrY_T0000973;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000973:5;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9798371	9798373	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000973;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000973;transcript_name=HG002_chrY_T0000973;gene_name=TSPY10;ID=stop_codon:HG002_chrY_T0000973;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9795811	9798560	100	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000974;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_G0000319;transcript_name=HG002_chrY_T0000974;gene_name=TSPY10;ID=HG002_chrY_T0000974;Name=TSPY10
HG002_chrY	CAT	exon	9795811	9796296	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000974;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000974;transcript_name=HG002_chrY_T0000974;gene_name=TSPY10;ID=exon:HG002_chrY_T0000974:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9795811	9796296	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000974;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000974;transcript_name=HG002_chrY_T0000974;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000974:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9795811	9795813	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000974;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000974;transcript_name=HG002_chrY_T0000974;gene_name=TSPY10;ID=start_codon:HG002_chrY_T0000974;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9796297	9796903	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000974;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000974;transcript_name=HG002_chrY_T0000974;gene_name=TSPY10;ID=intron:HG002_chrY_T0000974:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9796904	9796981	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000974;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000974;transcript_name=HG002_chrY_T0000974;gene_name=TSPY10;ID=exon:HG002_chrY_T0000974:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9796904	9796981	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000974;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000974;transcript_name=HG002_chrY_T0000974;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000974:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9796982	9797109	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000974;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000974;transcript_name=HG002_chrY_T0000974;gene_name=TSPY10;ID=intron:HG002_chrY_T0000974:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9797110	9797221	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000974;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000974;transcript_name=HG002_chrY_T0000974;gene_name=TSPY10;ID=exon:HG002_chrY_T0000974:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9797110	9797221	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000974;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000974;transcript_name=HG002_chrY_T0000974;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000974:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9797222	9797322	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000974;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000974;transcript_name=HG002_chrY_T0000974;gene_name=TSPY10;ID=intron:HG002_chrY_T0000974:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9797323	9797468	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000974;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000974;transcript_name=HG002_chrY_T0000974;gene_name=TSPY10;ID=exon:HG002_chrY_T0000974:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9797323	9797468	.	+	2	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000974;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000974;transcript_name=HG002_chrY_T0000974;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000974:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9797469	9797563	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000974;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000974;transcript_name=HG002_chrY_T0000974;gene_name=TSPY10;ID=intron:HG002_chrY_T0000974:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9797564	9797656	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000974;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000974;transcript_name=HG002_chrY_T0000974;gene_name=TSPY10;ID=exon:HG002_chrY_T0000974:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9797564	9797626	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000974;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000974;transcript_name=HG002_chrY_T0000974;gene_name=TSPY10;ID=CDS:HG002_chrY_T0000974:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9797624	9797626	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000974;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000974;transcript_name=HG002_chrY_T0000974;gene_name=TSPY10;ID=stop_codon:HG002_chrY_T0000974;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9797657	9798350	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000974;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000974;transcript_name=HG002_chrY_T0000974;gene_name=TSPY10;ID=intron:HG002_chrY_T0000974:4;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9798351	9798560	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000974;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000974;transcript_name=HG002_chrY_T0000974;gene_name=TSPY10;ID=exon:HG002_chrY_T0000974:5;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9795811	9798567	1000	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000975;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_G0000319;transcript_name=HG002_chrY_T0000975;gene_name=TSPY10;ID=HG002_chrY_T0000975;Name=TSPY10
HG002_chrY	CAT	exon	9795811	9796296	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000975;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000975;transcript_name=HG002_chrY_T0000975;gene_name=TSPY10;ID=exon:HG002_chrY_T0000975:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9796297	9796903	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000975;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000975;transcript_name=HG002_chrY_T0000975;gene_name=TSPY10;ID=intron:HG002_chrY_T0000975:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9796904	9796981	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000975;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000975;transcript_name=HG002_chrY_T0000975;gene_name=TSPY10;ID=exon:HG002_chrY_T0000975:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9796982	9797109	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000975;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000975;transcript_name=HG002_chrY_T0000975;gene_name=TSPY10;ID=intron:HG002_chrY_T0000975:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9797110	9797656	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000975;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000975;transcript_name=HG002_chrY_T0000975;gene_name=TSPY10;ID=exon:HG002_chrY_T0000975:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9797657	9797783	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000975;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000975;transcript_name=HG002_chrY_T0000975;gene_name=TSPY10;ID=intron:HG002_chrY_T0000975:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9797784	9798567	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000975;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000975;transcript_name=HG002_chrY_T0000975;gene_name=TSPY10;ID=exon:HG002_chrY_T0000975:3;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9797171	9798552	1000	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000976;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_G0000319;transcript_name=HG002_chrY_T0000976;gene_name=TSPY10;ID=HG002_chrY_T0000976;Name=TSPY10
HG002_chrY	CAT	exon	9797171	9797468	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000976;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000976;transcript_name=HG002_chrY_T0000976;gene_name=TSPY10;ID=exon:HG002_chrY_T0000976:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9797469	9797574	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000976;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000976;transcript_name=HG002_chrY_T0000976;gene_name=TSPY10;ID=intron:HG002_chrY_T0000976:0;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9797575	9797656	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000976;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000976;transcript_name=HG002_chrY_T0000976;gene_name=TSPY10;ID=exon:HG002_chrY_T0000976:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9797657	9798350	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000976;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000976;transcript_name=HG002_chrY_T0000976;gene_name=TSPY10;ID=intron:HG002_chrY_T0000976:1;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9798351	9798552	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG002_chrY_T0000976;gene_id=HG002_chrY_G0000319;Parent=HG002_chrY_T0000976;transcript_name=HG002_chrY_T0000976;gene_name=TSPY10;ID=exon:HG002_chrY_T0000976:2;Name=TSPY10;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9805825	9813702	.	-	.	source_gene_common_name=FAM197Y3;source_gene=ENSG00000290607.1;gene_id=HG002_chrY_G0000320;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG002_chrY_G0000320;Name=FAM197Y3
HG002_chrY	CAT	transcript	9805825	9813702	1000	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000977;gene_id=HG002_chrY_G0000320;Parent=HG002_chrY_G0000320;transcript_name=HG002_chrY_T0000977;gene_name=FAM197Y3;ID=HG002_chrY_T0000977;Name=FAM197Y3
HG002_chrY	CAT	exon	9805825	9807938	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000977;gene_id=HG002_chrY_G0000320;Parent=HG002_chrY_T0000977;transcript_name=HG002_chrY_T0000977;gene_name=FAM197Y3;ID=exon:HG002_chrY_T0000977:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9807939	9811487	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000977;gene_id=HG002_chrY_G0000320;Parent=HG002_chrY_T0000977;transcript_name=HG002_chrY_T0000977;gene_name=FAM197Y3;ID=intron:HG002_chrY_T0000977:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9811488	9811573	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000977;gene_id=HG002_chrY_G0000320;Parent=HG002_chrY_T0000977;transcript_name=HG002_chrY_T0000977;gene_name=FAM197Y3;ID=exon:HG002_chrY_T0000977:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9811574	9813381	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000977;gene_id=HG002_chrY_G0000320;Parent=HG002_chrY_T0000977;transcript_name=HG002_chrY_T0000977;gene_name=FAM197Y3;ID=intron:HG002_chrY_T0000977:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9813382	9813491	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000977;gene_id=HG002_chrY_G0000320;Parent=HG002_chrY_T0000977;transcript_name=HG002_chrY_T0000977;gene_name=FAM197Y3;ID=exon:HG002_chrY_T0000977:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9813492	9813687	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000977;gene_id=HG002_chrY_G0000320;Parent=HG002_chrY_T0000977;transcript_name=HG002_chrY_T0000977;gene_name=FAM197Y3;ID=intron:HG002_chrY_T0000977:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9813688	9813702	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000977;gene_id=HG002_chrY_G0000320;Parent=HG002_chrY_T0000977;transcript_name=HG002_chrY_T0000977;gene_name=FAM197Y3;ID=exon:HG002_chrY_T0000977:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9807879	9813483	1000	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000978;gene_id=HG002_chrY_G0000320;Parent=HG002_chrY_G0000320;transcript_name=HG002_chrY_T0000978;gene_name=FAM197Y3;ID=HG002_chrY_T0000978;Name=FAM197Y3
HG002_chrY	CAT	exon	9807879	9807938	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000978;gene_id=HG002_chrY_G0000320;Parent=HG002_chrY_T0000978;transcript_name=HG002_chrY_T0000978;gene_name=FAM197Y3;ID=exon:HG002_chrY_T0000978:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9807939	9811487	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000978;gene_id=HG002_chrY_G0000320;Parent=HG002_chrY_T0000978;transcript_name=HG002_chrY_T0000978;gene_name=FAM197Y3;ID=intron:HG002_chrY_T0000978:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9811488	9811646	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000978;gene_id=HG002_chrY_G0000320;Parent=HG002_chrY_T0000978;transcript_name=HG002_chrY_T0000978;gene_name=FAM197Y3;ID=exon:HG002_chrY_T0000978:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9811647	9813149	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000978;gene_id=HG002_chrY_G0000320;Parent=HG002_chrY_T0000978;transcript_name=HG002_chrY_T0000978;gene_name=FAM197Y3;ID=intron:HG002_chrY_T0000978:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9813150	9813295	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000978;gene_id=HG002_chrY_G0000320;Parent=HG002_chrY_T0000978;transcript_name=HG002_chrY_T0000978;gene_name=FAM197Y3;ID=exon:HG002_chrY_T0000978:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9813296	9813381	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000978;gene_id=HG002_chrY_G0000320;Parent=HG002_chrY_T0000978;transcript_name=HG002_chrY_T0000978;gene_name=FAM197Y3;ID=intron:HG002_chrY_T0000978:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9813382	9813483	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000978;gene_id=HG002_chrY_G0000320;Parent=HG002_chrY_T0000978;transcript_name=HG002_chrY_T0000978;gene_name=FAM197Y3;ID=exon:HG002_chrY_T0000978:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9813150	9815142	.	-	.	source_gene_common_name=FAM197Y3;source_gene=ENSG00000230066.7_1;gene_id=HG002_chrY_G0000321;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG002_chrY_G0000321;Name=FAM197Y3
HG002_chrY	CAT	transcript	9813150	9815142	1000	-	.	source_transcript=ENST00000618346.2;source_transcript_name=FAM197Y3-201;source_gene=ENSG00000230066.7_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230066.7_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618346.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618346.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000979;gene_id=HG002_chrY_G0000321;Parent=HG002_chrY_G0000321;transcript_name=HG002_chrY_T0000979;gene_name=FAM197Y3;ID=HG002_chrY_T0000979;Name=FAM197Y3
HG002_chrY	CAT	exon	9813150	9813295	.	-	.	source_transcript=ENST00000618346.2;source_transcript_name=FAM197Y3-201;source_gene=ENSG00000230066.7_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230066.7_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618346.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618346.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000979;gene_id=HG002_chrY_G0000321;Parent=HG002_chrY_T0000979;transcript_name=HG002_chrY_T0000979;gene_name=FAM197Y3;ID=exon:HG002_chrY_T0000979:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9813296	9814831	.	-	.	source_transcript=ENST00000618346.2;source_transcript_name=FAM197Y3-201;source_gene=ENSG00000230066.7_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230066.7_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618346.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618346.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000979;gene_id=HG002_chrY_G0000321;Parent=HG002_chrY_T0000979;transcript_name=HG002_chrY_T0000979;gene_name=FAM197Y3;ID=intron:HG002_chrY_T0000979:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9814832	9815142	.	-	.	source_transcript=ENST00000618346.2;source_transcript_name=FAM197Y3-201;source_gene=ENSG00000230066.7_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230066.7_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618346.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618346.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000979;gene_id=HG002_chrY_G0000321;Parent=HG002_chrY_T0000979;transcript_name=HG002_chrY_T0000979;gene_name=FAM197Y3;ID=exon:HG002_chrY_T0000979:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9816133	9818901	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1;gene_id=HG002_chrY_G0000322;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=HG002_chrY_G0000322;Name=ENSG00000293749
HG002_chrY	CAT	transcript	9816133	9818901	1000	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000980;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_G0000322;transcript_name=HG002_chrY_T0000980;gene_name=ENSG00000293749;ID=HG002_chrY_T0000980;Name=ENSG00000293749
HG002_chrY	CAT	exon	9816133	9816225	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000980;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000980;transcript_name=HG002_chrY_T0000980;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000980:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9816226	9816486	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000980;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000980;transcript_name=HG002_chrY_T0000980;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000980:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9816487	9816624	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000980;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000980;transcript_name=HG002_chrY_T0000980;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000980:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9816625	9817231	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000980;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000980;transcript_name=HG002_chrY_T0000980;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000980:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9817232	9817309	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000980;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000980;transcript_name=HG002_chrY_T0000980;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000980:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9817310	9817437	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000980;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000980;transcript_name=HG002_chrY_T0000980;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000980:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9817438	9817549	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000980;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000980;transcript_name=HG002_chrY_T0000980;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000980:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9817550	9817650	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000980;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000980;transcript_name=HG002_chrY_T0000980;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000980:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9817651	9817796	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000980;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000980;transcript_name=HG002_chrY_T0000980;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000980:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9817797	9817902	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000980;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000980;transcript_name=HG002_chrY_T0000980;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000980:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9817903	9817984	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000980;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000980;transcript_name=HG002_chrY_T0000980;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000980:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9817985	9818678	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000980;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000980;transcript_name=HG002_chrY_T0000980;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000980:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9818679	9818901	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000980;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000980;transcript_name=HG002_chrY_T0000980;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000980:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9816145	9818889	1000	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000982;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_G0000322;transcript_name=HG002_chrY_T0000982;gene_name=ENSG00000293749;ID=HG002_chrY_T0000982;Name=ENSG00000293749
HG002_chrY	CAT	exon	9816145	9816225	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000982;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000982;transcript_name=HG002_chrY_T0000982;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000982:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9816226	9816486	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000982;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000982;transcript_name=HG002_chrY_T0000982;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000982:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9816487	9816624	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000982;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000982;transcript_name=HG002_chrY_T0000982;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000982:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9816625	9817231	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000982;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000982;transcript_name=HG002_chrY_T0000982;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000982:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9817232	9817309	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000982;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000982;transcript_name=HG002_chrY_T0000982;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000982:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9817310	9817437	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000982;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000982;transcript_name=HG002_chrY_T0000982;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000982:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9817438	9817549	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000982;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000982;transcript_name=HG002_chrY_T0000982;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000982:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9817550	9817657	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000982;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000982;transcript_name=HG002_chrY_T0000982;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000982:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9817658	9817796	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000982;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000982;transcript_name=HG002_chrY_T0000982;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000982:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9817797	9817902	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000982;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000982;transcript_name=HG002_chrY_T0000982;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000982:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9817903	9817984	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000982;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000982;transcript_name=HG002_chrY_T0000982;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000982:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9817985	9818678	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000982;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000982;transcript_name=HG002_chrY_T0000982;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000982:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9818679	9818889	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000982;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000982;transcript_name=HG002_chrY_T0000982;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000982:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9816154	9818896	1000	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000983;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_G0000322;transcript_name=HG002_chrY_T0000983;gene_name=ENSG00000293749;ID=HG002_chrY_T0000983;Name=ENSG00000293749
HG002_chrY	CAT	exon	9816154	9816225	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000983;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000983;transcript_name=HG002_chrY_T0000983;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000983:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9816226	9816486	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000983;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000983;transcript_name=HG002_chrY_T0000983;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000983:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9816487	9816624	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000983;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000983;transcript_name=HG002_chrY_T0000983;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000983:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9816625	9817231	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000983;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000983;transcript_name=HG002_chrY_T0000983;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000983:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9817232	9817309	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000983;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000983;transcript_name=HG002_chrY_T0000983;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000983:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9817310	9817437	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000983;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000983;transcript_name=HG002_chrY_T0000983;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000983:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9817438	9817549	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000983;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000983;transcript_name=HG002_chrY_T0000983;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000983:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9817550	9817650	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000983;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000983;transcript_name=HG002_chrY_T0000983;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000983:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9817651	9817796	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000983;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000983;transcript_name=HG002_chrY_T0000983;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000983:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9817797	9817891	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000983;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000983;transcript_name=HG002_chrY_T0000983;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000983:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9817892	9817984	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000983;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000983;transcript_name=HG002_chrY_T0000983;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000983:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9817985	9818678	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000983;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000983;transcript_name=HG002_chrY_T0000983;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000983:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9818679	9818896	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000983;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000983;transcript_name=HG002_chrY_T0000983;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000983:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9816356	9818894	1000	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000984;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_G0000322;transcript_name=HG002_chrY_T0000984;gene_name=ENSG00000293749;ID=HG002_chrY_T0000984;Name=ENSG00000293749
HG002_chrY	CAT	exon	9816356	9816624	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000984;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000984;transcript_name=HG002_chrY_T0000984;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000984:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9816625	9817231	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000984;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000984;transcript_name=HG002_chrY_T0000984;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000984:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9817232	9817309	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000984;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000984;transcript_name=HG002_chrY_T0000984;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000984:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9817310	9817437	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000984;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000984;transcript_name=HG002_chrY_T0000984;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000984:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9817438	9817549	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000984;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000984;transcript_name=HG002_chrY_T0000984;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000984:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9817550	9817650	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000984;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000984;transcript_name=HG002_chrY_T0000984;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000984:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9817651	9817796	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000984;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000984;transcript_name=HG002_chrY_T0000984;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000984:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9817797	9817902	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000984;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000984;transcript_name=HG002_chrY_T0000984;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000984:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9817903	9817984	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000984;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000984;transcript_name=HG002_chrY_T0000984;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000984:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9817985	9818678	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000984;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000984;transcript_name=HG002_chrY_T0000984;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000984:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9818679	9818894	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000984;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000984;transcript_name=HG002_chrY_T0000984;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000984:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9816452	9818889	1000	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000985;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_G0000322;transcript_name=HG002_chrY_T0000985;gene_name=ENSG00000293749;ID=HG002_chrY_T0000985;Name=ENSG00000293749
HG002_chrY	CAT	exon	9816452	9816624	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000985;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000985;transcript_name=HG002_chrY_T0000985;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000985:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9816625	9817231	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000985;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000985;transcript_name=HG002_chrY_T0000985;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000985:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9817232	9817309	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000985;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000985;transcript_name=HG002_chrY_T0000985;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000985:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9817310	9817437	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000985;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000985;transcript_name=HG002_chrY_T0000985;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000985:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9817438	9817549	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000985;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000985;transcript_name=HG002_chrY_T0000985;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000985:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9817550	9817657	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000985;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000985;transcript_name=HG002_chrY_T0000985;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000985:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9817658	9817796	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000985;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000985;transcript_name=HG002_chrY_T0000985;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000985:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9817797	9817902	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000985;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000985;transcript_name=HG002_chrY_T0000985;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000985:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9817903	9817984	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000985;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000985;transcript_name=HG002_chrY_T0000985;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000985:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9817985	9818678	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000985;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000985;transcript_name=HG002_chrY_T0000985;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000985:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9818679	9818889	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000985;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000985;transcript_name=HG002_chrY_T0000985;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000985:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9816578	9818900	1000	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000986;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_G0000322;transcript_name=HG002_chrY_T0000986;gene_name=ENSG00000293749;ID=HG002_chrY_T0000986;Name=ENSG00000293749
HG002_chrY	CAT	exon	9816578	9816680	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000986;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000986;transcript_name=HG002_chrY_T0000986;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000986:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9816681	9817249	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000986;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000986;transcript_name=HG002_chrY_T0000986;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000986:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9817250	9817309	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000986;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000986;transcript_name=HG002_chrY_T0000986;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000986:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9817310	9817437	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000986;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000986;transcript_name=HG002_chrY_T0000986;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000986:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9817438	9817549	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000986;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000986;transcript_name=HG002_chrY_T0000986;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000986:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9817550	9817650	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000986;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000986;transcript_name=HG002_chrY_T0000986;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000986:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9817651	9817796	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000986;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000986;transcript_name=HG002_chrY_T0000986;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000986:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9817797	9817902	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000986;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000986;transcript_name=HG002_chrY_T0000986;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000986:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9817903	9817984	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000986;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000986;transcript_name=HG002_chrY_T0000986;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000986:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9817985	9818678	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000986;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000986;transcript_name=HG002_chrY_T0000986;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000986:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9818679	9818900	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000986;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000986;transcript_name=HG002_chrY_T0000986;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000986:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9817279	9818887	1000	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000987;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_G0000322;transcript_name=HG002_chrY_T0000987;gene_name=ENSG00000293749;ID=HG002_chrY_T0000987;Name=ENSG00000293749
HG002_chrY	CAT	exon	9817279	9817309	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000987;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000987;transcript_name=HG002_chrY_T0000987;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000987:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9817310	9817437	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000987;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000987;transcript_name=HG002_chrY_T0000987;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000987:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9817438	9817796	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000987;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000987;transcript_name=HG002_chrY_T0000987;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000987:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9817797	9817902	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000987;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000987;transcript_name=HG002_chrY_T0000987;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000987:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9817903	9817984	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000987;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000987;transcript_name=HG002_chrY_T0000987;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000987:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9817985	9818678	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000987;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000987;transcript_name=HG002_chrY_T0000987;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000987:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9818679	9818887	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000987;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000987;transcript_name=HG002_chrY_T0000987;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000987:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9817824	9818896	1000	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000988;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_G0000322;transcript_name=HG002_chrY_T0000988;gene_name=ENSG00000293749;ID=HG002_chrY_T0000988;Name=ENSG00000293749
HG002_chrY	CAT	exon	9817824	9817984	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000988;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000988;transcript_name=HG002_chrY_T0000988;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000988:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9817985	9818678	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000988;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000988;transcript_name=HG002_chrY_T0000988;gene_name=ENSG00000293749;ID=intron:HG002_chrY_T0000988:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9818679	9818896	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG002_chrY_T0000988;gene_id=HG002_chrY_G0000322;Parent=HG002_chrY_T0000988;transcript_name=HG002_chrY_T0000988;gene_name=ENSG00000293749;ID=exon:HG002_chrY_T0000988:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9816139	9818701	.	+	.	source_gene_common_name=TSPY6P;source_gene=ENSG00000270073.1;gene_id=HG002_chrY_G0000323;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY6P;gene_sources=liftoff;ID=HG002_chrY_G0000323;Name=TSPY6P
HG002_chrY	CAT	transcript	9816139	9818701	1000	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000981;gene_id=HG002_chrY_G0000323;Parent=HG002_chrY_G0000323;transcript_name=HG002_chrY_T0000981;gene_name=TSPY6P;ID=HG002_chrY_T0000981;Name=TSPY6P
HG002_chrY	CAT	exon	9816139	9816349	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000981;gene_id=HG002_chrY_G0000323;Parent=HG002_chrY_T0000981;transcript_name=HG002_chrY_T0000981;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000981:0;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9816350	9816357	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000981;gene_id=HG002_chrY_G0000323;Parent=HG002_chrY_T0000981;transcript_name=HG002_chrY_T0000981;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000981:0;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9816358	9816624	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000981;gene_id=HG002_chrY_G0000323;Parent=HG002_chrY_T0000981;transcript_name=HG002_chrY_T0000981;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000981:1;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9816625	9817231	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000981;gene_id=HG002_chrY_G0000323;Parent=HG002_chrY_T0000981;transcript_name=HG002_chrY_T0000981;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000981:1;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9817232	9817309	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000981;gene_id=HG002_chrY_G0000323;Parent=HG002_chrY_T0000981;transcript_name=HG002_chrY_T0000981;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000981:2;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9817310	9817437	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000981;gene_id=HG002_chrY_G0000323;Parent=HG002_chrY_T0000981;transcript_name=HG002_chrY_T0000981;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000981:2;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9817438	9817549	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000981;gene_id=HG002_chrY_G0000323;Parent=HG002_chrY_T0000981;transcript_name=HG002_chrY_T0000981;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000981:3;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9817550	9817650	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000981;gene_id=HG002_chrY_G0000323;Parent=HG002_chrY_T0000981;transcript_name=HG002_chrY_T0000981;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000981:3;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9817651	9817796	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000981;gene_id=HG002_chrY_G0000323;Parent=HG002_chrY_T0000981;transcript_name=HG002_chrY_T0000981;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000981:4;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9817797	9817902	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000981;gene_id=HG002_chrY_G0000323;Parent=HG002_chrY_T0000981;transcript_name=HG002_chrY_T0000981;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000981:4;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9817903	9817984	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000981;gene_id=HG002_chrY_G0000323;Parent=HG002_chrY_T0000981;transcript_name=HG002_chrY_T0000981;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000981:5;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9817985	9818678	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000981;gene_id=HG002_chrY_G0000323;Parent=HG002_chrY_T0000981;transcript_name=HG002_chrY_T0000981;gene_name=TSPY6P;ID=intron:HG002_chrY_T0000981:5;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9818679	9818701	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG002_chrY_T0000981;gene_id=HG002_chrY_G0000323;Parent=HG002_chrY_T0000981;transcript_name=HG002_chrY_T0000981;gene_name=TSPY6P;ID=exon:HG002_chrY_T0000981:6;Name=TSPY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9826135	9834012	.	-	.	source_gene_common_name=FAM197Y3;source_gene=ENSG00000290607.1;gene_id=HG002_chrY_G0000324;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG002_chrY_G0000324;Name=FAM197Y3
HG002_chrY	CAT	transcript	9826135	9834012	1000	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000989;gene_id=HG002_chrY_G0000324;Parent=HG002_chrY_G0000324;transcript_name=HG002_chrY_T0000989;gene_name=FAM197Y3;ID=HG002_chrY_T0000989;Name=FAM197Y3
HG002_chrY	CAT	exon	9826135	9828260	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000989;gene_id=HG002_chrY_G0000324;Parent=HG002_chrY_T0000989;transcript_name=HG002_chrY_T0000989;gene_name=FAM197Y3;ID=exon:HG002_chrY_T0000989:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9828261	9831811	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000989;gene_id=HG002_chrY_G0000324;Parent=HG002_chrY_T0000989;transcript_name=HG002_chrY_T0000989;gene_name=FAM197Y3;ID=intron:HG002_chrY_T0000989:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9831812	9831897	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000989;gene_id=HG002_chrY_G0000324;Parent=HG002_chrY_T0000989;transcript_name=HG002_chrY_T0000989;gene_name=FAM197Y3;ID=exon:HG002_chrY_T0000989:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9831898	9833691	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000989;gene_id=HG002_chrY_G0000324;Parent=HG002_chrY_T0000989;transcript_name=HG002_chrY_T0000989;gene_name=FAM197Y3;ID=intron:HG002_chrY_T0000989:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9833692	9833801	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000989;gene_id=HG002_chrY_G0000324;Parent=HG002_chrY_T0000989;transcript_name=HG002_chrY_T0000989;gene_name=FAM197Y3;ID=exon:HG002_chrY_T0000989:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9833802	9833997	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000989;gene_id=HG002_chrY_G0000324;Parent=HG002_chrY_T0000989;transcript_name=HG002_chrY_T0000989;gene_name=FAM197Y3;ID=intron:HG002_chrY_T0000989:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9833998	9834012	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000989;gene_id=HG002_chrY_G0000324;Parent=HG002_chrY_T0000989;transcript_name=HG002_chrY_T0000989;gene_name=FAM197Y3;ID=exon:HG002_chrY_T0000989:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9828201	9833793	1000	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000990;gene_id=HG002_chrY_G0000324;Parent=HG002_chrY_G0000324;transcript_name=HG002_chrY_T0000990;gene_name=FAM197Y3;ID=HG002_chrY_T0000990;Name=FAM197Y3
HG002_chrY	CAT	exon	9828201	9828260	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000990;gene_id=HG002_chrY_G0000324;Parent=HG002_chrY_T0000990;transcript_name=HG002_chrY_T0000990;gene_name=FAM197Y3;ID=exon:HG002_chrY_T0000990:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9828261	9831811	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000990;gene_id=HG002_chrY_G0000324;Parent=HG002_chrY_T0000990;transcript_name=HG002_chrY_T0000990;gene_name=FAM197Y3;ID=intron:HG002_chrY_T0000990:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9831812	9831970	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000990;gene_id=HG002_chrY_G0000324;Parent=HG002_chrY_T0000990;transcript_name=HG002_chrY_T0000990;gene_name=FAM197Y3;ID=exon:HG002_chrY_T0000990:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9831971	9833459	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000990;gene_id=HG002_chrY_G0000324;Parent=HG002_chrY_T0000990;transcript_name=HG002_chrY_T0000990;gene_name=FAM197Y3;ID=intron:HG002_chrY_T0000990:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9833460	9833605	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000990;gene_id=HG002_chrY_G0000324;Parent=HG002_chrY_T0000990;transcript_name=HG002_chrY_T0000990;gene_name=FAM197Y3;ID=exon:HG002_chrY_T0000990:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9833606	9833691	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000990;gene_id=HG002_chrY_G0000324;Parent=HG002_chrY_T0000990;transcript_name=HG002_chrY_T0000990;gene_name=FAM197Y3;ID=intron:HG002_chrY_T0000990:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9833692	9833793	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000990;gene_id=HG002_chrY_G0000324;Parent=HG002_chrY_T0000990;transcript_name=HG002_chrY_T0000990;gene_name=FAM197Y3;ID=exon:HG002_chrY_T0000990:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9833460	9835452	.	-	.	source_gene_common_name=FAM197Y3;source_gene=ENSG00000230066.7;gene_id=HG002_chrY_G0000325;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG002_chrY_G0000325;Name=FAM197Y3
HG002_chrY	CAT	transcript	9833460	9835452	1000	-	.	source_transcript=ENST00000618346.2;source_transcript_name=FAM197Y3-201;source_gene=ENSG00000230066.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230066.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618346.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618346.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000991;gene_id=HG002_chrY_G0000325;Parent=HG002_chrY_G0000325;transcript_name=HG002_chrY_T0000991;gene_name=FAM197Y3;ID=HG002_chrY_T0000991;Name=FAM197Y3
HG002_chrY	CAT	exon	9833460	9833605	.	-	.	source_transcript=ENST00000618346.2;source_transcript_name=FAM197Y3-201;source_gene=ENSG00000230066.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230066.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618346.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618346.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000991;gene_id=HG002_chrY_G0000325;Parent=HG002_chrY_T0000991;transcript_name=HG002_chrY_T0000991;gene_name=FAM197Y3;ID=exon:HG002_chrY_T0000991:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9833606	9835141	.	-	.	source_transcript=ENST00000618346.2;source_transcript_name=FAM197Y3-201;source_gene=ENSG00000230066.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230066.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618346.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618346.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000991;gene_id=HG002_chrY_G0000325;Parent=HG002_chrY_T0000991;transcript_name=HG002_chrY_T0000991;gene_name=FAM197Y3;ID=intron:HG002_chrY_T0000991:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9835142	9835452	.	-	.	source_transcript=ENST00000618346.2;source_transcript_name=FAM197Y3-201;source_gene=ENSG00000230066.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230066.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618346.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618346.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG002_chrY_T0000991;gene_id=HG002_chrY_G0000325;Parent=HG002_chrY_T0000991;transcript_name=HG002_chrY_T0000991;gene_name=FAM197Y3;ID=exon:HG002_chrY_T0000991:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9836406	9839218	.	+	.	source_gene_common_name=TSPY9;source_gene=ENSG00000238074.6;gene_id=HG002_chrY_G0000326;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff;ID=HG002_chrY_G0000326;Name=TSPY9
HG002_chrY	CAT	transcript	9836406	9839218	100	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000992;gene_id=HG002_chrY_G0000326;Parent=HG002_chrY_G0000326;transcript_name=HG002_chrY_T0000992;gene_name=TSPY9;ID=HG002_chrY_T0000992;Name=TSPY9
HG002_chrY	CAT	exon	9836406	9836955	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000992;gene_id=HG002_chrY_G0000326;Parent=HG002_chrY_T0000992;transcript_name=HG002_chrY_T0000992;gene_name=TSPY9;ID=exon:HG002_chrY_T0000992:0;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9836452	9836955	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000992;gene_id=HG002_chrY_G0000326;Parent=HG002_chrY_T0000992;transcript_name=HG002_chrY_T0000992;gene_name=TSPY9;ID=CDS:HG002_chrY_T0000992:0;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	9836452	9836454	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000992;gene_id=HG002_chrY_G0000326;Parent=HG002_chrY_T0000992;transcript_name=HG002_chrY_T0000992;gene_name=TSPY9;ID=start_codon:HG002_chrY_T0000992;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9836956	9837562	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000992;gene_id=HG002_chrY_G0000326;Parent=HG002_chrY_T0000992;transcript_name=HG002_chrY_T0000992;gene_name=TSPY9;ID=intron:HG002_chrY_T0000992:0;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9837563	9837640	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000992;gene_id=HG002_chrY_G0000326;Parent=HG002_chrY_T0000992;transcript_name=HG002_chrY_T0000992;gene_name=TSPY9;ID=exon:HG002_chrY_T0000992:1;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9837563	9837640	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000992;gene_id=HG002_chrY_G0000326;Parent=HG002_chrY_T0000992;transcript_name=HG002_chrY_T0000992;gene_name=TSPY9;ID=CDS:HG002_chrY_T0000992:1;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9837641	9837768	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000992;gene_id=HG002_chrY_G0000326;Parent=HG002_chrY_T0000992;transcript_name=HG002_chrY_T0000992;gene_name=TSPY9;ID=intron:HG002_chrY_T0000992:1;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9837769	9837880	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000992;gene_id=HG002_chrY_G0000326;Parent=HG002_chrY_T0000992;transcript_name=HG002_chrY_T0000992;gene_name=TSPY9;ID=exon:HG002_chrY_T0000992:2;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9837769	9837880	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000992;gene_id=HG002_chrY_G0000326;Parent=HG002_chrY_T0000992;transcript_name=HG002_chrY_T0000992;gene_name=TSPY9;ID=CDS:HG002_chrY_T0000992:2;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9837881	9837981	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000992;gene_id=HG002_chrY_G0000326;Parent=HG002_chrY_T0000992;transcript_name=HG002_chrY_T0000992;gene_name=TSPY9;ID=intron:HG002_chrY_T0000992:2;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9837982	9838127	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000992;gene_id=HG002_chrY_G0000326;Parent=HG002_chrY_T0000992;transcript_name=HG002_chrY_T0000992;gene_name=TSPY9;ID=exon:HG002_chrY_T0000992:3;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9837982	9838127	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000992;gene_id=HG002_chrY_G0000326;Parent=HG002_chrY_T0000992;transcript_name=HG002_chrY_T0000992;gene_name=TSPY9;ID=CDS:HG002_chrY_T0000992:3;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9838128	9838233	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000992;gene_id=HG002_chrY_G0000326;Parent=HG002_chrY_T0000992;transcript_name=HG002_chrY_T0000992;gene_name=TSPY9;ID=intron:HG002_chrY_T0000992:3;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9838234	9838315	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000992;gene_id=HG002_chrY_G0000326;Parent=HG002_chrY_T0000992;transcript_name=HG002_chrY_T0000992;gene_name=TSPY9;ID=exon:HG002_chrY_T0000992:4;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9838234	9838315	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000992;gene_id=HG002_chrY_G0000326;Parent=HG002_chrY_T0000992;transcript_name=HG002_chrY_T0000992;gene_name=TSPY9;ID=CDS:HG002_chrY_T0000992:4;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9838316	9839007	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000992;gene_id=HG002_chrY_G0000326;Parent=HG002_chrY_T0000992;transcript_name=HG002_chrY_T0000992;gene_name=TSPY9;ID=intron:HG002_chrY_T0000992:4;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9839008	9839218	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000992;gene_id=HG002_chrY_G0000326;Parent=HG002_chrY_T0000992;transcript_name=HG002_chrY_T0000992;gene_name=TSPY9;ID=exon:HG002_chrY_T0000992:5;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	9839008	9839030	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000992;gene_id=HG002_chrY_G0000326;Parent=HG002_chrY_T0000992;transcript_name=HG002_chrY_T0000992;gene_name=TSPY9;ID=CDS:HG002_chrY_T0000992:5;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	9839028	9839030	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG002_chrY_T0000992;gene_id=HG002_chrY_G0000326;Parent=HG002_chrY_T0000992;transcript_name=HG002_chrY_T0000992;gene_name=TSPY9;ID=stop_codon:HG002_chrY_T0000992;Name=TSPY9;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9853464	9855694	.	-	.	source_gene_common_name=FAM197Y1;source_gene=ENSG00000224336.2;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;gene_id=HG002_chrY_G0000327;gene_biotype=unprocessed_pseudogene;gene_name=FAM197Y1;gene_sources=liftoff;ID=HG002_chrY_G0000327;Name=FAM197Y1
HG002_chrY	CAT	transcript	9853464	9855694	1000	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=HG002_chrY_T0000993;gene_id=HG002_chrY_G0000327;Parent=HG002_chrY_G0000327;transcript_name=HG002_chrY_T0000993;gene_name=FAM197Y1;ID=HG002_chrY_T0000993;Name=FAM197Y1
HG002_chrY	CAT	exon	9853464	9853553	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=HG002_chrY_T0000993;gene_id=HG002_chrY_G0000327;Parent=HG002_chrY_T0000993;transcript_name=HG002_chrY_T0000993;gene_name=FAM197Y1;ID=exon:HG002_chrY_T0000993:0;Name=FAM197Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9853554	9853671	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=HG002_chrY_T0000993;gene_id=HG002_chrY_G0000327;Parent=HG002_chrY_T0000993;transcript_name=HG002_chrY_T0000993;gene_name=FAM197Y1;ID=intron:HG002_chrY_T0000993:0;Name=FAM197Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9853672	9853817	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=HG002_chrY_T0000993;gene_id=HG002_chrY_G0000327;Parent=HG002_chrY_T0000993;transcript_name=HG002_chrY_T0000993;gene_name=FAM197Y1;ID=exon:HG002_chrY_T0000993:1;Name=FAM197Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9853818	9853903	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=HG002_chrY_T0000993;gene_id=HG002_chrY_G0000327;Parent=HG002_chrY_T0000993;transcript_name=HG002_chrY_T0000993;gene_name=FAM197Y1;ID=intron:HG002_chrY_T0000993:1;Name=FAM197Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9853904	9854013	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=HG002_chrY_T0000993;gene_id=HG002_chrY_G0000327;Parent=HG002_chrY_T0000993;transcript_name=HG002_chrY_T0000993;gene_name=FAM197Y1;ID=exon:HG002_chrY_T0000993:2;Name=FAM197Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9854014	9854209	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=HG002_chrY_T0000993;gene_id=HG002_chrY_G0000327;Parent=HG002_chrY_T0000993;transcript_name=HG002_chrY_T0000993;gene_name=FAM197Y1;ID=intron:HG002_chrY_T0000993:2;Name=FAM197Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9854210	9854271	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=HG002_chrY_T0000993;gene_id=HG002_chrY_G0000327;Parent=HG002_chrY_T0000993;transcript_name=HG002_chrY_T0000993;gene_name=FAM197Y1;ID=exon:HG002_chrY_T0000993:3;Name=FAM197Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9854272	9855338	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=HG002_chrY_T0000993;gene_id=HG002_chrY_G0000327;Parent=HG002_chrY_T0000993;transcript_name=HG002_chrY_T0000993;gene_name=FAM197Y1;ID=intron:HG002_chrY_T0000993:3;Name=FAM197Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9855339	9855694	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=HG002_chrY_T0000993;gene_id=HG002_chrY_G0000327;Parent=HG002_chrY_T0000993;transcript_name=HG002_chrY_T0000993;gene_name=FAM197Y1;ID=exon:HG002_chrY_T0000993:4;Name=FAM197Y1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9856658	9859230	.	+	.	source_gene_common_name=TSPY15P;source_gene=ENSG00000236786.1;gene_id=HG002_chrY_G0000328;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY15P;gene_sources=liftoff;ID=HG002_chrY_G0000328;Name=TSPY15P
HG002_chrY	CAT	transcript	9856658	9859230	1000	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG002_chrY_T0000994;gene_id=HG002_chrY_G0000328;Parent=HG002_chrY_G0000328;transcript_name=HG002_chrY_T0000994;gene_name=TSPY15P;ID=HG002_chrY_T0000994;Name=TSPY15P
HG002_chrY	CAT	exon	9856658	9857129	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG002_chrY_T0000994;gene_id=HG002_chrY_G0000328;Parent=HG002_chrY_T0000994;transcript_name=HG002_chrY_T0000994;gene_name=TSPY15P;ID=exon:HG002_chrY_T0000994:0;Name=TSPY15P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9857130	9857736	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG002_chrY_T0000994;gene_id=HG002_chrY_G0000328;Parent=HG002_chrY_T0000994;transcript_name=HG002_chrY_T0000994;gene_name=TSPY15P;ID=intron:HG002_chrY_T0000994:0;Name=TSPY15P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9857737	9857814	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG002_chrY_T0000994;gene_id=HG002_chrY_G0000328;Parent=HG002_chrY_T0000994;transcript_name=HG002_chrY_T0000994;gene_name=TSPY15P;ID=exon:HG002_chrY_T0000994:1;Name=TSPY15P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9857815	9857942	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG002_chrY_T0000994;gene_id=HG002_chrY_G0000328;Parent=HG002_chrY_T0000994;transcript_name=HG002_chrY_T0000994;gene_name=TSPY15P;ID=intron:HG002_chrY_T0000994:1;Name=TSPY15P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9857943	9858054	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG002_chrY_T0000994;gene_id=HG002_chrY_G0000328;Parent=HG002_chrY_T0000994;transcript_name=HG002_chrY_T0000994;gene_name=TSPY15P;ID=exon:HG002_chrY_T0000994:2;Name=TSPY15P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9858055	9858155	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG002_chrY_T0000994;gene_id=HG002_chrY_G0000328;Parent=HG002_chrY_T0000994;transcript_name=HG002_chrY_T0000994;gene_name=TSPY15P;ID=intron:HG002_chrY_T0000994:2;Name=TSPY15P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9858156	9858300	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG002_chrY_T0000994;gene_id=HG002_chrY_G0000328;Parent=HG002_chrY_T0000994;transcript_name=HG002_chrY_T0000994;gene_name=TSPY15P;ID=exon:HG002_chrY_T0000994:3;Name=TSPY15P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9858301	9858395	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG002_chrY_T0000994;gene_id=HG002_chrY_G0000328;Parent=HG002_chrY_T0000994;transcript_name=HG002_chrY_T0000994;gene_name=TSPY15P;ID=intron:HG002_chrY_T0000994:3;Name=TSPY15P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9858396	9858488	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG002_chrY_T0000994;gene_id=HG002_chrY_G0000328;Parent=HG002_chrY_T0000994;transcript_name=HG002_chrY_T0000994;gene_name=TSPY15P;ID=exon:HG002_chrY_T0000994:4;Name=TSPY15P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9858489	9859208	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG002_chrY_T0000994;gene_id=HG002_chrY_G0000328;Parent=HG002_chrY_T0000994;transcript_name=HG002_chrY_T0000994;gene_name=TSPY15P;ID=intron:HG002_chrY_T0000994:4;Name=TSPY15P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9859209	9859230	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG002_chrY_T0000994;gene_id=HG002_chrY_G0000328;Parent=HG002_chrY_T0000994;transcript_name=HG002_chrY_T0000994;gene_name=TSPY15P;ID=exon:HG002_chrY_T0000994:5;Name=TSPY15P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9856662	9859429	.	+	.	source_gene_common_name=ENSG00000308528;source_gene=ENSG00000308528.1;gene_id=HG002_chrY_G0000329;gene_biotype=lncRNA;gene_name=ENSG00000308528;gene_sources=liftoff;ID=HG002_chrY_G0000329;Name=ENSG00000308528
HG002_chrY	CAT	transcript	9856662	9859429	1000	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG002_chrY_T0000995;gene_id=HG002_chrY_G0000329;Parent=HG002_chrY_G0000329;transcript_name=HG002_chrY_T0000995;gene_name=ENSG00000308528;ID=HG002_chrY_T0000995;Name=ENSG00000308528
HG002_chrY	CAT	exon	9856662	9857129	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG002_chrY_T0000995;gene_id=HG002_chrY_G0000329;Parent=HG002_chrY_T0000995;transcript_name=HG002_chrY_T0000995;gene_name=ENSG00000308528;ID=exon:HG002_chrY_T0000995:0;Name=ENSG00000308528;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9857130	9857736	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG002_chrY_T0000995;gene_id=HG002_chrY_G0000329;Parent=HG002_chrY_T0000995;transcript_name=HG002_chrY_T0000995;gene_name=ENSG00000308528;ID=intron:HG002_chrY_T0000995:0;Name=ENSG00000308528;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9857737	9857814	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG002_chrY_T0000995;gene_id=HG002_chrY_G0000329;Parent=HG002_chrY_T0000995;transcript_name=HG002_chrY_T0000995;gene_name=ENSG00000308528;ID=exon:HG002_chrY_T0000995:1;Name=ENSG00000308528;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9857815	9857942	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG002_chrY_T0000995;gene_id=HG002_chrY_G0000329;Parent=HG002_chrY_T0000995;transcript_name=HG002_chrY_T0000995;gene_name=ENSG00000308528;ID=intron:HG002_chrY_T0000995:1;Name=ENSG00000308528;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9857943	9858054	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG002_chrY_T0000995;gene_id=HG002_chrY_G0000329;Parent=HG002_chrY_T0000995;transcript_name=HG002_chrY_T0000995;gene_name=ENSG00000308528;ID=exon:HG002_chrY_T0000995:2;Name=ENSG00000308528;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9858055	9858155	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG002_chrY_T0000995;gene_id=HG002_chrY_G0000329;Parent=HG002_chrY_T0000995;transcript_name=HG002_chrY_T0000995;gene_name=ENSG00000308528;ID=intron:HG002_chrY_T0000995:2;Name=ENSG00000308528;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9858156	9858300	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG002_chrY_T0000995;gene_id=HG002_chrY_G0000329;Parent=HG002_chrY_T0000995;transcript_name=HG002_chrY_T0000995;gene_name=ENSG00000308528;ID=exon:HG002_chrY_T0000995:3;Name=ENSG00000308528;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9858301	9858406	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG002_chrY_T0000995;gene_id=HG002_chrY_G0000329;Parent=HG002_chrY_T0000995;transcript_name=HG002_chrY_T0000995;gene_name=ENSG00000308528;ID=intron:HG002_chrY_T0000995:3;Name=ENSG00000308528;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9858407	9858488	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG002_chrY_T0000995;gene_id=HG002_chrY_G0000329;Parent=HG002_chrY_T0000995;transcript_name=HG002_chrY_T0000995;gene_name=ENSG00000308528;ID=exon:HG002_chrY_T0000995:4;Name=ENSG00000308528;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9858489	9859184	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG002_chrY_T0000995;gene_id=HG002_chrY_G0000329;Parent=HG002_chrY_T0000995;transcript_name=HG002_chrY_T0000995;gene_name=ENSG00000308528;ID=intron:HG002_chrY_T0000995:4;Name=ENSG00000308528;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9859185	9859429	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG002_chrY_T0000995;gene_id=HG002_chrY_G0000329;Parent=HG002_chrY_T0000995;transcript_name=HG002_chrY_T0000995;gene_name=ENSG00000308528;ID=exon:HG002_chrY_T0000995:5;Name=ENSG00000308528;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9858415	9859422	1000	+	.	source_transcript=ENST00000834808.1;source_transcript_name=ENST00000834808;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834808.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG002_chrY_T0000996;gene_id=HG002_chrY_G0000329;Parent=HG002_chrY_G0000329;transcript_name=HG002_chrY_T0000996;gene_name=ENSG00000308528;ID=HG002_chrY_T0000996;Name=ENSG00000308528
HG002_chrY	CAT	exon	9858415	9858488	.	+	.	source_transcript=ENST00000834808.1;source_transcript_name=ENST00000834808;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG002_chrY_T0000996;gene_id=HG002_chrY_G0000329;Parent=HG002_chrY_T0000996;transcript_name=HG002_chrY_T0000996;gene_name=ENSG00000308528;ID=exon:HG002_chrY_T0000996:0;Name=ENSG00000308528;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9858489	9859184	.	+	.	source_transcript=ENST00000834808.1;source_transcript_name=ENST00000834808;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG002_chrY_T0000996;gene_id=HG002_chrY_G0000329;Parent=HG002_chrY_T0000996;transcript_name=HG002_chrY_T0000996;gene_name=ENSG00000308528;ID=intron:HG002_chrY_T0000996:0;Name=ENSG00000308528;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9859185	9859422	.	+	.	source_transcript=ENST00000834808.1;source_transcript_name=ENST00000834808;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG002_chrY_T0000996;gene_id=HG002_chrY_G0000329;Parent=HG002_chrY_T0000996;transcript_name=HG002_chrY_T0000996;gene_name=ENSG00000308528;ID=exon:HG002_chrY_T0000996:1;Name=ENSG00000308528;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9918508	9940898	.	-	.	source_gene_common_name=ENSG00000309329;source_gene=ENSG00000309329.1;gene_id=HG002_chrY_G0000330;gene_biotype=lncRNA;gene_name=ENSG00000309329;gene_sources=liftoff;ID=HG002_chrY_G0000330;Name=ENSG00000309329
HG002_chrY	CAT	transcript	9918508	9931868	1000	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0000997;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_G0000330;transcript_name=HG002_chrY_T0000997;gene_name=ENSG00000309329;ID=HG002_chrY_T0000997;Name=ENSG00000309329
HG002_chrY	CAT	exon	9918508	9919423	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0000997;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0000997;transcript_name=HG002_chrY_T0000997;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0000997:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9919424	9923333	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0000997;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0000997;transcript_name=HG002_chrY_T0000997;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0000997:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9923334	9923435	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0000997;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0000997;transcript_name=HG002_chrY_T0000997;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0000997:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9923436	9923641	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0000997;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0000997;transcript_name=HG002_chrY_T0000997;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0000997:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9923642	9923745	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0000997;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0000997;transcript_name=HG002_chrY_T0000997;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0000997:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9923746	9929178	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0000997;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0000997;transcript_name=HG002_chrY_T0000997;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0000997:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9929179	9929268	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0000997;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0000997;transcript_name=HG002_chrY_T0000997;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0000997:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9929269	9931706	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0000997;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0000997;transcript_name=HG002_chrY_T0000997;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0000997:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9931707	9931868	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0000997;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0000997;transcript_name=HG002_chrY_T0000997;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0000997:4;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9918510	9931868	1000	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0000998;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_G0000330;transcript_name=HG002_chrY_T0000998;gene_name=ENSG00000309329;ID=HG002_chrY_T0000998;Name=ENSG00000309329
HG002_chrY	CAT	exon	9918510	9919423	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0000998;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0000998;transcript_name=HG002_chrY_T0000998;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0000998:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9919424	9920972	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0000998;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0000998;transcript_name=HG002_chrY_T0000998;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0000998:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9920973	9921086	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0000998;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0000998;transcript_name=HG002_chrY_T0000998;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0000998:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9921087	9923333	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0000998;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0000998;transcript_name=HG002_chrY_T0000998;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0000998:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9923334	9923435	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0000998;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0000998;transcript_name=HG002_chrY_T0000998;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0000998:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9923436	9923641	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0000998;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0000998;transcript_name=HG002_chrY_T0000998;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0000998:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9923642	9923745	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0000998;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0000998;transcript_name=HG002_chrY_T0000998;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0000998:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9923746	9929178	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0000998;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0000998;transcript_name=HG002_chrY_T0000998;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0000998:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9929179	9929268	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0000998;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0000998;transcript_name=HG002_chrY_T0000998;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0000998:4;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9929269	9931706	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0000998;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0000998;transcript_name=HG002_chrY_T0000998;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0000998:4;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9931707	9931868	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0000998;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0000998;transcript_name=HG002_chrY_T0000998;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0000998:5;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9918511	9931868	1000	-	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0000999;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_G0000330;transcript_name=HG002_chrY_T0000999;gene_name=ENSG00000309329;ID=HG002_chrY_T0000999;Name=ENSG00000309329
HG002_chrY	CAT	exon	9918511	9919423	.	-	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0000999;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0000999;transcript_name=HG002_chrY_T0000999;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0000999:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9919424	9923333	.	-	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0000999;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0000999;transcript_name=HG002_chrY_T0000999;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0000999:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9923334	9923435	.	-	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0000999;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0000999;transcript_name=HG002_chrY_T0000999;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0000999:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9923436	9929178	.	-	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0000999;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0000999;transcript_name=HG002_chrY_T0000999;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0000999:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9929179	9929268	.	-	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0000999;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0000999;transcript_name=HG002_chrY_T0000999;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0000999:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9929269	9931706	.	-	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0000999;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0000999;transcript_name=HG002_chrY_T0000999;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0000999:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9931707	9931868	.	-	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0000999;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0000999;transcript_name=HG002_chrY_T0000999;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0000999:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9918843	9931852	1000	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001000;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_G0000330;transcript_name=HG002_chrY_T0001000;gene_name=ENSG00000309329;ID=HG002_chrY_T0001000;Name=ENSG00000309329
HG002_chrY	CAT	exon	9918843	9919423	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001000;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001000;transcript_name=HG002_chrY_T0001000;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0001000:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9919424	9920972	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001000;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001000;transcript_name=HG002_chrY_T0001000;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0001000:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9920973	9921086	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001000;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001000;transcript_name=HG002_chrY_T0001000;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0001000:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9921087	9923333	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001000;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001000;transcript_name=HG002_chrY_T0001000;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0001000:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9923334	9923435	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001000;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001000;transcript_name=HG002_chrY_T0001000;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0001000:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9923436	9923641	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001000;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001000;transcript_name=HG002_chrY_T0001000;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0001000:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9923642	9923754	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001000;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001000;transcript_name=HG002_chrY_T0001000;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0001000:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9923755	9929178	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001000;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001000;transcript_name=HG002_chrY_T0001000;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0001000:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9929179	9929268	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001000;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001000;transcript_name=HG002_chrY_T0001000;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0001000:4;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9929269	9931706	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001000;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001000;transcript_name=HG002_chrY_T0001000;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0001000:4;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9931707	9931852	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001000;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001000;transcript_name=HG002_chrY_T0001000;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0001000:5;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9918843	9931868	1000	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001001;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_G0000330;transcript_name=HG002_chrY_T0001001;gene_name=ENSG00000309329;ID=HG002_chrY_T0001001;Name=ENSG00000309329
HG002_chrY	CAT	exon	9918843	9919423	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001001;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001001;transcript_name=HG002_chrY_T0001001;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0001001:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9919424	9920972	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001001;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001001;transcript_name=HG002_chrY_T0001001;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0001001:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9920973	9921086	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001001;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001001;transcript_name=HG002_chrY_T0001001;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0001001:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9921087	9923333	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001001;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001001;transcript_name=HG002_chrY_T0001001;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0001001:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9923334	9923435	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001001;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001001;transcript_name=HG002_chrY_T0001001;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0001001:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9923436	9929178	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001001;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001001;transcript_name=HG002_chrY_T0001001;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0001001:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9929179	9929268	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001001;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001001;transcript_name=HG002_chrY_T0001001;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0001001:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9929269	9931706	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001001;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001001;transcript_name=HG002_chrY_T0001001;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0001001:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9931707	9931868	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001001;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001001;transcript_name=HG002_chrY_T0001001;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0001001:4;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9918850	9931857	1000	-	.	source_transcript=ENST00000840326.1;source_transcript_name=ENST00000840326;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840326.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001002;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_G0000330;transcript_name=HG002_chrY_T0001002;gene_name=ENSG00000309329;ID=HG002_chrY_T0001002;Name=ENSG00000309329
HG002_chrY	CAT	exon	9918850	9919423	.	-	.	source_transcript=ENST00000840326.1;source_transcript_name=ENST00000840326;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001002;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001002;transcript_name=HG002_chrY_T0001002;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0001002:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9919424	9929178	.	-	.	source_transcript=ENST00000840326.1;source_transcript_name=ENST00000840326;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001002;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001002;transcript_name=HG002_chrY_T0001002;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0001002:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9929179	9929268	.	-	.	source_transcript=ENST00000840326.1;source_transcript_name=ENST00000840326;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001002;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001002;transcript_name=HG002_chrY_T0001002;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0001002:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9929269	9931706	.	-	.	source_transcript=ENST00000840326.1;source_transcript_name=ENST00000840326;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001002;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001002;transcript_name=HG002_chrY_T0001002;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0001002:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9931707	9931857	.	-	.	source_transcript=ENST00000840326.1;source_transcript_name=ENST00000840326;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001002;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001002;transcript_name=HG002_chrY_T0001002;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0001002:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9918857	9931862	1000	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001003;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_G0000330;transcript_name=HG002_chrY_T0001003;gene_name=ENSG00000309329;ID=HG002_chrY_T0001003;Name=ENSG00000309329
HG002_chrY	CAT	exon	9918857	9919423	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001003;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001003;transcript_name=HG002_chrY_T0001003;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0001003:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9919424	9923333	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001003;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001003;transcript_name=HG002_chrY_T0001003;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0001003:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9923334	9923435	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001003;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001003;transcript_name=HG002_chrY_T0001003;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0001003:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9923436	9923641	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001003;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001003;transcript_name=HG002_chrY_T0001003;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0001003:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9923642	9923754	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001003;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001003;transcript_name=HG002_chrY_T0001003;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0001003:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9923755	9929178	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001003;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001003;transcript_name=HG002_chrY_T0001003;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0001003:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9929179	9929268	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001003;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001003;transcript_name=HG002_chrY_T0001003;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0001003:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9929269	9931706	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001003;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001003;transcript_name=HG002_chrY_T0001003;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0001003:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9931707	9931862	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001003;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001003;transcript_name=HG002_chrY_T0001003;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0001003:4;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9919105	9940898	1000	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001004;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_G0000330;transcript_name=HG002_chrY_T0001004;gene_name=ENSG00000309329;ID=HG002_chrY_T0001004;Name=ENSG00000309329
HG002_chrY	CAT	exon	9919105	9919423	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001004;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001004;transcript_name=HG002_chrY_T0001004;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0001004:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9919424	9920972	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001004;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001004;transcript_name=HG002_chrY_T0001004;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0001004:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9920973	9921086	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001004;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001004;transcript_name=HG002_chrY_T0001004;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0001004:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9921087	9923333	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001004;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001004;transcript_name=HG002_chrY_T0001004;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0001004:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9923334	9923435	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001004;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001004;transcript_name=HG002_chrY_T0001004;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0001004:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9923436	9923641	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001004;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001004;transcript_name=HG002_chrY_T0001004;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0001004:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9923642	9923754	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001004;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001004;transcript_name=HG002_chrY_T0001004;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0001004:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9923755	9929178	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001004;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001004;transcript_name=HG002_chrY_T0001004;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0001004:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9929179	9929268	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001004;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001004;transcript_name=HG002_chrY_T0001004;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0001004:4;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9929269	9940860	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001004;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001004;transcript_name=HG002_chrY_T0001004;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0001004:4;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9940861	9940898	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001004;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001004;transcript_name=HG002_chrY_T0001004;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0001004:5;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9928432	9931852	1000	-	.	source_transcript=ENST00000840328.1;source_transcript_name=ENST00000840328;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840328.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001006;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_G0000330;transcript_name=HG002_chrY_T0001006;gene_name=ENSG00000309329;ID=HG002_chrY_T0001006;Name=ENSG00000309329
HG002_chrY	CAT	exon	9928432	9928948	.	-	.	source_transcript=ENST00000840328.1;source_transcript_name=ENST00000840328;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001006;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001006;transcript_name=HG002_chrY_T0001006;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0001006:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9928949	9929178	.	-	.	source_transcript=ENST00000840328.1;source_transcript_name=ENST00000840328;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001006;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001006;transcript_name=HG002_chrY_T0001006;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0001006:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9929179	9929268	.	-	.	source_transcript=ENST00000840328.1;source_transcript_name=ENST00000840328;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001006;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001006;transcript_name=HG002_chrY_T0001006;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0001006:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9929269	9931706	.	-	.	source_transcript=ENST00000840328.1;source_transcript_name=ENST00000840328;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001006;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001006;transcript_name=HG002_chrY_T0001006;gene_name=ENSG00000309329;ID=intron:HG002_chrY_T0001006:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9931707	9931852	.	-	.	source_transcript=ENST00000840328.1;source_transcript_name=ENST00000840328;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG002_chrY_T0001006;gene_id=HG002_chrY_G0000330;Parent=HG002_chrY_T0001006;transcript_name=HG002_chrY_T0001006;gene_name=ENSG00000309329;ID=exon:HG002_chrY_T0001006:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9919123	9929828	.	-	.	source_gene_common_name=RBMY3AP;source_gene=ENSG00000231436.1;gene_id=HG002_chrY_G0000331;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY3AP;gene_sources=liftoff;ID=HG002_chrY_G0000331;Name=RBMY3AP
HG002_chrY	CAT	transcript	9919123	9929828	1000	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG002_chrY_T0001005;gene_id=HG002_chrY_G0000331;Parent=HG002_chrY_G0000331;transcript_name=HG002_chrY_T0001005;gene_name=RBMY3AP;ID=HG002_chrY_T0001005;Name=RBMY3AP
HG002_chrY	CAT	exon	9919123	9919423	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG002_chrY_T0001005;gene_id=HG002_chrY_G0000331;Parent=HG002_chrY_T0001005;transcript_name=HG002_chrY_T0001005;gene_name=RBMY3AP;ID=exon:HG002_chrY_T0001005:0;Name=RBMY3AP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9919424	9919835	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG002_chrY_T0001005;gene_id=HG002_chrY_G0000331;Parent=HG002_chrY_T0001005;transcript_name=HG002_chrY_T0001005;gene_name=RBMY3AP;ID=intron:HG002_chrY_T0001005:0;Name=RBMY3AP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9919836	9919919	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG002_chrY_T0001005;gene_id=HG002_chrY_G0000331;Parent=HG002_chrY_T0001005;transcript_name=HG002_chrY_T0001005;gene_name=RBMY3AP;ID=exon:HG002_chrY_T0001005:1;Name=RBMY3AP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9919920	9920004	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG002_chrY_T0001005;gene_id=HG002_chrY_G0000331;Parent=HG002_chrY_T0001005;transcript_name=HG002_chrY_T0001005;gene_name=RBMY3AP;ID=intron:HG002_chrY_T0001005:1;Name=RBMY3AP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9920005	9920115	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG002_chrY_T0001005;gene_id=HG002_chrY_G0000331;Parent=HG002_chrY_T0001005;transcript_name=HG002_chrY_T0001005;gene_name=RBMY3AP;ID=exon:HG002_chrY_T0001005:2;Name=RBMY3AP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9920116	9920972	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG002_chrY_T0001005;gene_id=HG002_chrY_G0000331;Parent=HG002_chrY_T0001005;transcript_name=HG002_chrY_T0001005;gene_name=RBMY3AP;ID=intron:HG002_chrY_T0001005:2;Name=RBMY3AP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9920973	9921086	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG002_chrY_T0001005;gene_id=HG002_chrY_G0000331;Parent=HG002_chrY_T0001005;transcript_name=HG002_chrY_T0001005;gene_name=RBMY3AP;ID=exon:HG002_chrY_T0001005:3;Name=RBMY3AP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9921087	9923641	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG002_chrY_T0001005;gene_id=HG002_chrY_G0000331;Parent=HG002_chrY_T0001005;transcript_name=HG002_chrY_T0001005;gene_name=RBMY3AP;ID=intron:HG002_chrY_T0001005:3;Name=RBMY3AP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9923642	9923788	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG002_chrY_T0001005;gene_id=HG002_chrY_G0000331;Parent=HG002_chrY_T0001005;transcript_name=HG002_chrY_T0001005;gene_name=RBMY3AP;ID=exon:HG002_chrY_T0001005:4;Name=RBMY3AP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9923789	9925704	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG002_chrY_T0001005;gene_id=HG002_chrY_G0000331;Parent=HG002_chrY_T0001005;transcript_name=HG002_chrY_T0001005;gene_name=RBMY3AP;ID=intron:HG002_chrY_T0001005:4;Name=RBMY3AP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9925705	9925879	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG002_chrY_T0001005;gene_id=HG002_chrY_G0000331;Parent=HG002_chrY_T0001005;transcript_name=HG002_chrY_T0001005;gene_name=RBMY3AP;ID=exon:HG002_chrY_T0001005:5;Name=RBMY3AP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9925880	9929178	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG002_chrY_T0001005;gene_id=HG002_chrY_G0000331;Parent=HG002_chrY_T0001005;transcript_name=HG002_chrY_T0001005;gene_name=RBMY3AP;ID=intron:HG002_chrY_T0001005:5;Name=RBMY3AP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9929179	9929282	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG002_chrY_T0001005;gene_id=HG002_chrY_G0000331;Parent=HG002_chrY_T0001005;transcript_name=HG002_chrY_T0001005;gene_name=RBMY3AP;ID=exon:HG002_chrY_T0001005:6;Name=RBMY3AP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9929283	9929719	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG002_chrY_T0001005;gene_id=HG002_chrY_G0000331;Parent=HG002_chrY_T0001005;transcript_name=HG002_chrY_T0001005;gene_name=RBMY3AP;ID=intron:HG002_chrY_T0001005:6;Name=RBMY3AP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9929720	9929828	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG002_chrY_T0001005;gene_id=HG002_chrY_G0000331;Parent=HG002_chrY_T0001005;transcript_name=HG002_chrY_T0001005;gene_name=RBMY3AP;ID=exon:HG002_chrY_T0001005:7;Name=RBMY3AP;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9932735	9934904	.	+	.	source_gene_common_name=TSPY25P;source_gene=ENSG00000234110.1;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;gene_id=HG002_chrY_G0000332;gene_biotype=unprocessed_pseudogene;gene_name=TSPY25P;gene_sources=liftoff;ID=HG002_chrY_G0000332;Name=TSPY25P
HG002_chrY	CAT	transcript	9932735	9934904	1000	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=HG002_chrY_T0001007;gene_id=HG002_chrY_G0000332;Parent=HG002_chrY_G0000332;transcript_name=HG002_chrY_T0001007;gene_name=TSPY25P;ID=HG002_chrY_T0001007;Name=TSPY25P
HG002_chrY	CAT	exon	9932735	9933097	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=HG002_chrY_T0001007;gene_id=HG002_chrY_G0000332;Parent=HG002_chrY_T0001007;transcript_name=HG002_chrY_T0001007;gene_name=TSPY25P;ID=exon:HG002_chrY_T0001007:0;Name=TSPY25P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9933098	9934121	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=HG002_chrY_T0001007;gene_id=HG002_chrY_G0000332;Parent=HG002_chrY_T0001007;transcript_name=HG002_chrY_T0001007;gene_name=TSPY25P;ID=intron:HG002_chrY_T0001007:0;Name=TSPY25P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9934122	9934208	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=HG002_chrY_T0001007;gene_id=HG002_chrY_G0000332;Parent=HG002_chrY_T0001007;transcript_name=HG002_chrY_T0001007;gene_name=TSPY25P;ID=exon:HG002_chrY_T0001007:1;Name=TSPY25P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9934209	9934413	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=HG002_chrY_T0001007;gene_id=HG002_chrY_G0000332;Parent=HG002_chrY_T0001007;transcript_name=HG002_chrY_T0001007;gene_name=TSPY25P;ID=intron:HG002_chrY_T0001007:1;Name=TSPY25P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9934414	9934526	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=HG002_chrY_T0001007;gene_id=HG002_chrY_G0000332;Parent=HG002_chrY_T0001007;transcript_name=HG002_chrY_T0001007;gene_name=TSPY25P;ID=exon:HG002_chrY_T0001007:2;Name=TSPY25P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9934527	9934612	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=HG002_chrY_T0001007;gene_id=HG002_chrY_G0000332;Parent=HG002_chrY_T0001007;transcript_name=HG002_chrY_T0001007;gene_name=TSPY25P;ID=intron:HG002_chrY_T0001007:2;Name=TSPY25P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9934613	9934753	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=HG002_chrY_T0001007;gene_id=HG002_chrY_G0000332;Parent=HG002_chrY_T0001007;transcript_name=HG002_chrY_T0001007;gene_name=TSPY25P;ID=exon:HG002_chrY_T0001007:3;Name=TSPY25P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9934754	9934863	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=HG002_chrY_T0001007;gene_id=HG002_chrY_G0000332;Parent=HG002_chrY_T0001007;transcript_name=HG002_chrY_T0001007;gene_name=TSPY25P;ID=intron:HG002_chrY_T0001007:3;Name=TSPY25P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9934864	9934904	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=HG002_chrY_T0001007;gene_id=HG002_chrY_G0000332;Parent=HG002_chrY_T0001007;transcript_name=HG002_chrY_T0001007;gene_name=TSPY25P;ID=exon:HG002_chrY_T0001007:4;Name=TSPY25P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9948801	9949268	.	-	.	source_gene_common_name=TSPY16P;source_gene=ENSG00000226223.1;alternative_source_transcripts=ENST00000449843.1,ENST00000449843.1;gene_id=HG002_chrY_G0000333;gene_biotype=unprocessed_pseudogene;gene_name=TSPY16P;gene_sources=liftoff;ID=HG002_chrY_G0000333;Name=TSPY16P
HG002_chrY	CAT	transcript	9948801	9949268	1000	-	.	source_transcript=ENST00000449843.1;source_transcript_name=TSPY16P-201;source_gene=ENSG00000226223.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226223.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449843.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY16P;alternative_source_transcripts=ENST00000449843.1,ENST00000449843.1;transcript_id=HG002_chrY_T0001008;gene_id=HG002_chrY_G0000333;Parent=HG002_chrY_G0000333;transcript_name=HG002_chrY_T0001008;gene_name=TSPY16P;ID=HG002_chrY_T0001008;Name=TSPY16P
HG002_chrY	CAT	exon	9948801	9949268	.	-	.	source_transcript=ENST00000449843.1;source_transcript_name=TSPY16P-201;source_gene=ENSG00000226223.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226223.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449843.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY16P;alternative_source_transcripts=ENST00000449843.1,ENST00000449843.1;transcript_id=HG002_chrY_T0001008;gene_id=HG002_chrY_G0000333;Parent=HG002_chrY_T0001008;transcript_name=HG002_chrY_T0001008;gene_name=TSPY16P;ID=exon:HG002_chrY_T0001008:0;Name=TSPY16P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9973787	9977568	.	+	.	source_gene_common_name=ENSG00000232617;source_gene=ENSG00000232617.1;alternative_source_transcripts=ENST00000426129.1,ENST00000426129.1;gene_id=HG002_chrY_G0000334;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000232617;gene_sources=liftoff;ID=HG002_chrY_G0000334;Name=ENSG00000232617
HG002_chrY	CAT	transcript	9973787	9977568	1000	+	.	source_transcript=ENST00000426129.1;source_transcript_name=ENST00000426129;source_gene=ENSG00000232617.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232617.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426129.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000232617;alternative_source_transcripts=ENST00000426129.1,ENST00000426129.1;transcript_id=HG002_chrY_T0001009;gene_id=HG002_chrY_G0000334;Parent=HG002_chrY_G0000334;transcript_name=HG002_chrY_T0001009;gene_name=ENSG00000232617;ID=HG002_chrY_T0001009;Name=ENSG00000232617
HG002_chrY	CAT	exon	9973787	9973959	.	+	.	source_transcript=ENST00000426129.1;source_transcript_name=ENST00000426129;source_gene=ENSG00000232617.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232617.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426129.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000232617;alternative_source_transcripts=ENST00000426129.1,ENST00000426129.1;transcript_id=HG002_chrY_T0001009;gene_id=HG002_chrY_G0000334;Parent=HG002_chrY_T0001009;transcript_name=HG002_chrY_T0001009;gene_name=ENSG00000232617;ID=exon:HG002_chrY_T0001009:0;Name=ENSG00000232617;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9973960	9977480	.	+	.	source_transcript=ENST00000426129.1;source_transcript_name=ENST00000426129;source_gene=ENSG00000232617.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232617.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426129.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000232617;alternative_source_transcripts=ENST00000426129.1,ENST00000426129.1;transcript_id=HG002_chrY_T0001009;gene_id=HG002_chrY_G0000334;Parent=HG002_chrY_T0001009;transcript_name=HG002_chrY_T0001009;gene_name=ENSG00000232617;ID=intron:HG002_chrY_T0001009:0;Name=ENSG00000232617;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	9977481	9977568	.	+	.	source_transcript=ENST00000426129.1;source_transcript_name=ENST00000426129;source_gene=ENSG00000232617.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232617.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426129.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000232617;alternative_source_transcripts=ENST00000426129.1,ENST00000426129.1;transcript_id=HG002_chrY_T0001009;gene_id=HG002_chrY_G0000334;Parent=HG002_chrY_T0001009;transcript_name=HG002_chrY_T0001009;gene_name=ENSG00000232617;ID=exon:HG002_chrY_T0001009:1;Name=ENSG00000232617;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	9999588	10010244	.	+	.	source_gene_common_name=TTTY8;source_gene=ENSG00000183385.10;alternative_source_transcripts=ENST00000849217.1,ENST00000849217.1;gene_id=HG002_chrY_G0000335;gene_biotype=lncRNA;gene_name=TTTY8;gene_sources=liftoff;ID=HG002_chrY_G0000335;Name=TTTY8
HG002_chrY	CAT	transcript	9999588	10002248	1000	+	.	source_transcript=ENST00000849217.1;source_transcript_name=TTTY8-206;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849217.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849217.1,ENST00000849217.1;transcript_id=HG002_chrY_T0001010;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_G0000335;transcript_name=HG002_chrY_T0001010;gene_name=TTTY8;ID=HG002_chrY_T0001010;Name=TTTY8
HG002_chrY	CAT	exon	9999588	9999627	.	+	.	source_transcript=ENST00000849217.1;source_transcript_name=TTTY8-206;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849217.1,ENST00000849217.1;transcript_id=HG002_chrY_T0001010;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_T0001010;transcript_name=HG002_chrY_T0001010;gene_name=TTTY8;ID=exon:HG002_chrY_T0001010:0;Name=TTTY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9999628	10000261	.	+	.	source_transcript=ENST00000849217.1;source_transcript_name=TTTY8-206;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849217.1,ENST00000849217.1;transcript_id=HG002_chrY_T0001010;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_T0001010;transcript_name=HG002_chrY_T0001010;gene_name=TTTY8;ID=intron:HG002_chrY_T0001010:0;Name=TTTY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10000262	10000466	.	+	.	source_transcript=ENST00000849217.1;source_transcript_name=TTTY8-206;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849217.1,ENST00000849217.1;transcript_id=HG002_chrY_T0001010;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_T0001010;transcript_name=HG002_chrY_T0001010;gene_name=TTTY8;ID=exon:HG002_chrY_T0001010:1;Name=TTTY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10000467	10002058	.	+	.	source_transcript=ENST00000849217.1;source_transcript_name=TTTY8-206;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849217.1,ENST00000849217.1;transcript_id=HG002_chrY_T0001010;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_T0001010;transcript_name=HG002_chrY_T0001010;gene_name=TTTY8;ID=intron:HG002_chrY_T0001010:1;Name=TTTY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10002059	10002248	.	+	.	source_transcript=ENST00000849217.1;source_transcript_name=TTTY8-206;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849217.1,ENST00000849217.1;transcript_id=HG002_chrY_T0001010;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_T0001010;transcript_name=HG002_chrY_T0001010;gene_name=TTTY8;ID=exon:HG002_chrY_T0001010:2;Name=TTTY8;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9999592	10010244	1000	+	.	source_transcript=ENST00000849214.1;source_transcript_name=TTTY8-203;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849214.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849214.1,ENST00000849214.1;transcript_id=HG002_chrY_T0001011;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_G0000335;transcript_name=HG002_chrY_T0001011;gene_name=TTTY8;ID=HG002_chrY_T0001011;Name=TTTY8
HG002_chrY	CAT	exon	9999592	9999784	.	+	.	source_transcript=ENST00000849214.1;source_transcript_name=TTTY8-203;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849214.1,ENST00000849214.1;transcript_id=HG002_chrY_T0001011;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_T0001011;transcript_name=HG002_chrY_T0001011;gene_name=TTTY8;ID=exon:HG002_chrY_T0001011:0;Name=TTTY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9999785	10000261	.	+	.	source_transcript=ENST00000849214.1;source_transcript_name=TTTY8-203;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849214.1,ENST00000849214.1;transcript_id=HG002_chrY_T0001011;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_T0001011;transcript_name=HG002_chrY_T0001011;gene_name=TTTY8;ID=intron:HG002_chrY_T0001011:0;Name=TTTY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10000262	10000466	.	+	.	source_transcript=ENST00000849214.1;source_transcript_name=TTTY8-203;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849214.1,ENST00000849214.1;transcript_id=HG002_chrY_T0001011;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_T0001011;transcript_name=HG002_chrY_T0001011;gene_name=TTTY8;ID=exon:HG002_chrY_T0001011:1;Name=TTTY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10000467	10009993	.	+	.	source_transcript=ENST00000849214.1;source_transcript_name=TTTY8-203;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849214.1,ENST00000849214.1;transcript_id=HG002_chrY_T0001011;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_T0001011;transcript_name=HG002_chrY_T0001011;gene_name=TTTY8;ID=intron:HG002_chrY_T0001011:1;Name=TTTY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10009994	10010244	.	+	.	source_transcript=ENST00000849214.1;source_transcript_name=TTTY8-203;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849214.1,ENST00000849214.1;transcript_id=HG002_chrY_T0001011;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_T0001011;transcript_name=HG002_chrY_T0001011;gene_name=TTTY8;ID=exon:HG002_chrY_T0001011:2;Name=TTTY8;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9999604	10010216	1000	+	.	source_transcript=ENST00000849215.1;source_transcript_name=TTTY8-204;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849215.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849215.1,ENST00000849215.1;transcript_id=HG002_chrY_T0001012;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_G0000335;transcript_name=HG002_chrY_T0001012;gene_name=TTTY8;ID=HG002_chrY_T0001012;Name=TTTY8
HG002_chrY	CAT	exon	9999604	9999627	.	+	.	source_transcript=ENST00000849215.1;source_transcript_name=TTTY8-204;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849215.1,ENST00000849215.1;transcript_id=HG002_chrY_T0001012;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_T0001012;transcript_name=HG002_chrY_T0001012;gene_name=TTTY8;ID=exon:HG002_chrY_T0001012:0;Name=TTTY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9999628	10000261	.	+	.	source_transcript=ENST00000849215.1;source_transcript_name=TTTY8-204;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849215.1,ENST00000849215.1;transcript_id=HG002_chrY_T0001012;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_T0001012;transcript_name=HG002_chrY_T0001012;gene_name=TTTY8;ID=intron:HG002_chrY_T0001012:0;Name=TTTY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10000262	10000466	.	+	.	source_transcript=ENST00000849215.1;source_transcript_name=TTTY8-204;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849215.1,ENST00000849215.1;transcript_id=HG002_chrY_T0001012;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_T0001012;transcript_name=HG002_chrY_T0001012;gene_name=TTTY8;ID=exon:HG002_chrY_T0001012:1;Name=TTTY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10000467	10009993	.	+	.	source_transcript=ENST00000849215.1;source_transcript_name=TTTY8-204;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849215.1,ENST00000849215.1;transcript_id=HG002_chrY_T0001012;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_T0001012;transcript_name=HG002_chrY_T0001012;gene_name=TTTY8;ID=intron:HG002_chrY_T0001012:1;Name=TTTY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10009994	10010216	.	+	.	source_transcript=ENST00000849215.1;source_transcript_name=TTTY8-204;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849215.1,ENST00000849215.1;transcript_id=HG002_chrY_T0001012;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_T0001012;transcript_name=HG002_chrY_T0001012;gene_name=TTTY8;ID=exon:HG002_chrY_T0001012:2;Name=TTTY8;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9999618	10002248	1000	+	.	source_transcript=ENST00000329684.8;source_transcript_name=TTTY8-201;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000329684.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000329684.8;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000329684.8,ENST00000329684.8;transcript_id=HG002_chrY_T0001013;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_G0000335;transcript_name=HG002_chrY_T0001013;gene_name=TTTY8;ID=HG002_chrY_T0001013;Name=TTTY8
HG002_chrY	CAT	exon	9999618	9999784	.	+	.	source_transcript=ENST00000329684.8;source_transcript_name=TTTY8-201;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000329684.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000329684.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000329684.8,ENST00000329684.8;transcript_id=HG002_chrY_T0001013;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_T0001013;transcript_name=HG002_chrY_T0001013;gene_name=TTTY8;ID=exon:HG002_chrY_T0001013:0;Name=TTTY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9999785	10000261	.	+	.	source_transcript=ENST00000329684.8;source_transcript_name=TTTY8-201;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000329684.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000329684.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000329684.8,ENST00000329684.8;transcript_id=HG002_chrY_T0001013;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_T0001013;transcript_name=HG002_chrY_T0001013;gene_name=TTTY8;ID=intron:HG002_chrY_T0001013:0;Name=TTTY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10000262	10000466	.	+	.	source_transcript=ENST00000329684.8;source_transcript_name=TTTY8-201;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000329684.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000329684.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000329684.8,ENST00000329684.8;transcript_id=HG002_chrY_T0001013;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_T0001013;transcript_name=HG002_chrY_T0001013;gene_name=TTTY8;ID=exon:HG002_chrY_T0001013:1;Name=TTTY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10000467	10002058	.	+	.	source_transcript=ENST00000329684.8;source_transcript_name=TTTY8-201;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000329684.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000329684.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000329684.8,ENST00000329684.8;transcript_id=HG002_chrY_T0001013;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_T0001013;transcript_name=HG002_chrY_T0001013;gene_name=TTTY8;ID=intron:HG002_chrY_T0001013:1;Name=TTTY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10002059	10002248	.	+	.	source_transcript=ENST00000329684.8;source_transcript_name=TTTY8-201;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000329684.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000329684.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000329684.8,ENST00000329684.8;transcript_id=HG002_chrY_T0001013;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_T0001013;transcript_name=HG002_chrY_T0001013;gene_name=TTTY8;ID=exon:HG002_chrY_T0001013:2;Name=TTTY8;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9999624	10002506	1000	+	.	source_transcript=ENST00000426035.2;source_transcript_name=TTTY8-202;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426035.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426035.2;transcript_score=299.81600000000003;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000426035.2,ENST00000426035.2;transcript_id=HG002_chrY_T0001014;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_G0000335;transcript_name=HG002_chrY_T0001014;gene_name=TTTY8;ID=HG002_chrY_T0001014;Name=TTTY8
HG002_chrY	CAT	exon	9999624	9999784	.	+	.	source_transcript=ENST00000426035.2;source_transcript_name=TTTY8-202;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426035.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426035.2;transcript_score=299.81600000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000426035.2,ENST00000426035.2;transcript_id=HG002_chrY_T0001014;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_T0001014;transcript_name=HG002_chrY_T0001014;gene_name=TTTY8;ID=exon:HG002_chrY_T0001014:0;Name=TTTY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9999785	10000261	.	+	.	source_transcript=ENST00000426035.2;source_transcript_name=TTTY8-202;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426035.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426035.2;transcript_score=299.81600000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000426035.2,ENST00000426035.2;transcript_id=HG002_chrY_T0001014;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_T0001014;transcript_name=HG002_chrY_T0001014;gene_name=TTTY8;ID=intron:HG002_chrY_T0001014:0;Name=TTTY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10000262	10000466	.	+	.	source_transcript=ENST00000426035.2;source_transcript_name=TTTY8-202;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426035.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426035.2;transcript_score=299.81600000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000426035.2,ENST00000426035.2;transcript_id=HG002_chrY_T0001014;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_T0001014;transcript_name=HG002_chrY_T0001014;gene_name=TTTY8;ID=exon:HG002_chrY_T0001014:1;Name=TTTY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10000467	10002329	.	+	.	source_transcript=ENST00000426035.2;source_transcript_name=TTTY8-202;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426035.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426035.2;transcript_score=299.81600000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000426035.2,ENST00000426035.2;transcript_id=HG002_chrY_T0001014;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_T0001014;transcript_name=HG002_chrY_T0001014;gene_name=TTTY8;ID=intron:HG002_chrY_T0001014:1;Name=TTTY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10002330	10002506	.	+	.	source_transcript=ENST00000426035.2;source_transcript_name=TTTY8-202;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426035.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426035.2;transcript_score=299.81600000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000426035.2,ENST00000426035.2;transcript_id=HG002_chrY_T0001014;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_T0001014;transcript_name=HG002_chrY_T0001014;gene_name=TTTY8;ID=exon:HG002_chrY_T0001014:2;Name=TTTY8;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	9999649	10002494	1000	+	.	source_transcript=ENST00000849216.1;source_transcript_name=TTTY8-205;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849216.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849216.1,ENST00000849216.1;transcript_id=HG002_chrY_T0001015;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_G0000335;transcript_name=HG002_chrY_T0001015;gene_name=TTTY8;ID=HG002_chrY_T0001015;Name=TTTY8
HG002_chrY	CAT	exon	9999649	9999784	.	+	.	source_transcript=ENST00000849216.1;source_transcript_name=TTTY8-205;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849216.1,ENST00000849216.1;transcript_id=HG002_chrY_T0001015;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_T0001015;transcript_name=HG002_chrY_T0001015;gene_name=TTTY8;ID=exon:HG002_chrY_T0001015:0;Name=TTTY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	9999785	10000265	.	+	.	source_transcript=ENST00000849216.1;source_transcript_name=TTTY8-205;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849216.1,ENST00000849216.1;transcript_id=HG002_chrY_T0001015;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_T0001015;transcript_name=HG002_chrY_T0001015;gene_name=TTTY8;ID=intron:HG002_chrY_T0001015:0;Name=TTTY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10000266	10000466	.	+	.	source_transcript=ENST00000849216.1;source_transcript_name=TTTY8-205;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849216.1,ENST00000849216.1;transcript_id=HG002_chrY_T0001015;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_T0001015;transcript_name=HG002_chrY_T0001015;gene_name=TTTY8;ID=exon:HG002_chrY_T0001015:1;Name=TTTY8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10000467	10002329	.	+	.	source_transcript=ENST00000849216.1;source_transcript_name=TTTY8-205;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849216.1,ENST00000849216.1;transcript_id=HG002_chrY_T0001015;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_T0001015;transcript_name=HG002_chrY_T0001015;gene_name=TTTY8;ID=intron:HG002_chrY_T0001015:1;Name=TTTY8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10002330	10002494	.	+	.	source_transcript=ENST00000849216.1;source_transcript_name=TTTY8-205;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849216.1,ENST00000849216.1;transcript_id=HG002_chrY_T0001015;gene_id=HG002_chrY_G0000335;Parent=HG002_chrY_T0001015;transcript_name=HG002_chrY_T0001015;gene_name=TTTY8;ID=exon:HG002_chrY_T0001015:2;Name=TTTY8;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	10015373	10032413	.	-	.	source_gene_common_name=TTTY7B;source_gene=ENSG00000147761.10;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;gene_id=HG002_chrY_G0000336;gene_biotype=lncRNA;gene_name=TTTY7B;gene_sources=liftoff;ID=HG002_chrY_G0000336;Name=TTTY7B
HG002_chrY	CAT	transcript	10015373	10023811	1000	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=299.927;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=HG002_chrY_T0001016;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_G0000336;transcript_name=HG002_chrY_T0001016;gene_name=TTTY7B;ID=HG002_chrY_T0001016;Name=TTTY7B
HG002_chrY	CAT	exon	10015373	10015618	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=299.927;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=HG002_chrY_T0001016;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001016;transcript_name=HG002_chrY_T0001016;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001016:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10015619	10015864	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=299.927;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=HG002_chrY_T0001016;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001016;transcript_name=HG002_chrY_T0001016;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001016:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10015865	10016120	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=299.927;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=HG002_chrY_T0001016;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001016;transcript_name=HG002_chrY_T0001016;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001016:1;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10016121	10017093	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=299.927;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=HG002_chrY_T0001016;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001016;transcript_name=HG002_chrY_T0001016;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001016:1;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10017094	10017207	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=299.927;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=HG002_chrY_T0001016;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001016;transcript_name=HG002_chrY_T0001016;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001016:2;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10017208	10019124	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=299.927;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=HG002_chrY_T0001016;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001016;transcript_name=HG002_chrY_T0001016;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001016:2;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10019125	10019601	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=299.927;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=HG002_chrY_T0001016;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001016;transcript_name=HG002_chrY_T0001016;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001016:3;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10019602	10020289	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=299.927;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=HG002_chrY_T0001016;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001016;transcript_name=HG002_chrY_T0001016;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001016:3;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10020290	10020364	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=299.927;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=HG002_chrY_T0001016;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001016;transcript_name=HG002_chrY_T0001016;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001016:4;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10020365	10022671	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=299.927;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=HG002_chrY_T0001016;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001016;transcript_name=HG002_chrY_T0001016;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001016:4;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10022672	10022833	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=299.927;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=HG002_chrY_T0001016;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001016;transcript_name=HG002_chrY_T0001016;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001016:5;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10022834	10023774	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=299.927;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=HG002_chrY_T0001016;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001016;transcript_name=HG002_chrY_T0001016;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001016:5;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10023775	10023811	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=299.927;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=HG002_chrY_T0001016;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001016;transcript_name=HG002_chrY_T0001016;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001016:6;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10015373	10023811	1000	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=299.90999999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=HG002_chrY_T0001017;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_G0000336;transcript_name=HG002_chrY_T0001017;gene_name=TTTY7B;ID=HG002_chrY_T0001017;Name=TTTY7B
HG002_chrY	CAT	exon	10015373	10015618	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=299.90999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=HG002_chrY_T0001017;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001017;transcript_name=HG002_chrY_T0001017;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001017:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10015619	10017093	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=299.90999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=HG002_chrY_T0001017;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001017;transcript_name=HG002_chrY_T0001017;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001017:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10017094	10017207	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=299.90999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=HG002_chrY_T0001017;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001017;transcript_name=HG002_chrY_T0001017;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001017:1;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10017208	10019124	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=299.90999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=HG002_chrY_T0001017;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001017;transcript_name=HG002_chrY_T0001017;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001017:1;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10019125	10019601	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=299.90999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=HG002_chrY_T0001017;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001017;transcript_name=HG002_chrY_T0001017;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001017:2;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10019602	10020289	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=299.90999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=HG002_chrY_T0001017;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001017;transcript_name=HG002_chrY_T0001017;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001017:2;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10020290	10020364	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=299.90999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=HG002_chrY_T0001017;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001017;transcript_name=HG002_chrY_T0001017;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001017:3;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10020365	10022671	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=299.90999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=HG002_chrY_T0001017;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001017;transcript_name=HG002_chrY_T0001017;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001017:3;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10022672	10022833	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=299.90999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=HG002_chrY_T0001017;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001017;transcript_name=HG002_chrY_T0001017;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001017:4;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10022834	10023774	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=299.90999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=HG002_chrY_T0001017;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001017;transcript_name=HG002_chrY_T0001017;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001017:4;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10023775	10023811	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=299.90999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=HG002_chrY_T0001017;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001017;transcript_name=HG002_chrY_T0001017;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001017:5;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10015373	10019374	1000	-	.	source_transcript=ENST00000447655.5;source_transcript_name=TTTY7B-204;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447655.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000447655.5;transcript_score=299.859;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000447655.5,ENST00000447655.5;transcript_id=HG002_chrY_T0001018;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_G0000336;transcript_name=HG002_chrY_T0001018;gene_name=TTTY7B;ID=HG002_chrY_T0001018;Name=TTTY7B
HG002_chrY	CAT	exon	10015373	10015618	.	-	.	source_transcript=ENST00000447655.5;source_transcript_name=TTTY7B-204;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447655.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000447655.5;transcript_score=299.859;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000447655.5,ENST00000447655.5;transcript_id=HG002_chrY_T0001018;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001018;transcript_name=HG002_chrY_T0001018;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001018:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10015619	10017093	.	-	.	source_transcript=ENST00000447655.5;source_transcript_name=TTTY7B-204;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447655.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000447655.5;transcript_score=299.859;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000447655.5,ENST00000447655.5;transcript_id=HG002_chrY_T0001018;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001018;transcript_name=HG002_chrY_T0001018;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001018:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10017094	10017306	.	-	.	source_transcript=ENST00000447655.5;source_transcript_name=TTTY7B-204;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447655.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000447655.5;transcript_score=299.859;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000447655.5,ENST00000447655.5;transcript_id=HG002_chrY_T0001018;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001018;transcript_name=HG002_chrY_T0001018;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001018:1;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10017307	10019124	.	-	.	source_transcript=ENST00000447655.5;source_transcript_name=TTTY7B-204;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447655.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000447655.5;transcript_score=299.859;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000447655.5,ENST00000447655.5;transcript_id=HG002_chrY_T0001018;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001018;transcript_name=HG002_chrY_T0001018;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001018:1;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10019125	10019374	.	-	.	source_transcript=ENST00000447655.5;source_transcript_name=TTTY7B-204;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447655.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000447655.5;transcript_score=299.859;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000447655.5,ENST00000447655.5;transcript_id=HG002_chrY_T0001018;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001018;transcript_name=HG002_chrY_T0001018;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001018:2;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10015373	10029935	1000	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=299.876;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=HG002_chrY_T0001019;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_G0000336;transcript_name=HG002_chrY_T0001019;gene_name=TTTY7B;ID=HG002_chrY_T0001019;Name=TTTY7B
HG002_chrY	CAT	exon	10015373	10015618	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=HG002_chrY_T0001019;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001019;transcript_name=HG002_chrY_T0001019;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001019:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10015619	10017093	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=HG002_chrY_T0001019;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001019;transcript_name=HG002_chrY_T0001019;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001019:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10017094	10017207	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=HG002_chrY_T0001019;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001019;transcript_name=HG002_chrY_T0001019;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001019:1;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10017208	10020289	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=HG002_chrY_T0001019;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001019;transcript_name=HG002_chrY_T0001019;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001019:1;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10020290	10020364	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=HG002_chrY_T0001019;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001019;transcript_name=HG002_chrY_T0001019;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001019:2;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10020365	10022671	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=HG002_chrY_T0001019;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001019;transcript_name=HG002_chrY_T0001019;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001019:2;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10022672	10022753	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=HG002_chrY_T0001019;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001019;transcript_name=HG002_chrY_T0001019;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001019:3;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10022754	10029643	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=HG002_chrY_T0001019;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001019;transcript_name=HG002_chrY_T0001019;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001019:3;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10029644	10029935	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=HG002_chrY_T0001019;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001019;transcript_name=HG002_chrY_T0001019;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001019:4;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10015373	10029935	1000	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=299.897;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=HG002_chrY_T0001020;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_G0000336;transcript_name=HG002_chrY_T0001020;gene_name=TTTY7B;ID=HG002_chrY_T0001020;Name=TTTY7B
HG002_chrY	CAT	exon	10015373	10015618	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=HG002_chrY_T0001020;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001020;transcript_name=HG002_chrY_T0001020;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001020:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10015619	10017093	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=HG002_chrY_T0001020;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001020;transcript_name=HG002_chrY_T0001020;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001020:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10017094	10017207	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=HG002_chrY_T0001020;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001020;transcript_name=HG002_chrY_T0001020;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001020:1;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10017208	10020289	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=HG002_chrY_T0001020;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001020;transcript_name=HG002_chrY_T0001020;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001020:1;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10020290	10020364	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=HG002_chrY_T0001020;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001020;transcript_name=HG002_chrY_T0001020;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001020:2;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10020365	10022671	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=HG002_chrY_T0001020;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001020;transcript_name=HG002_chrY_T0001020;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001020:2;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10022672	10022753	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=HG002_chrY_T0001020;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001020;transcript_name=HG002_chrY_T0001020;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001020:3;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10022754	10028361	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=HG002_chrY_T0001020;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001020;transcript_name=HG002_chrY_T0001020;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001020:3;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10028362	10028519	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=HG002_chrY_T0001020;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001020;transcript_name=HG002_chrY_T0001020;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001020:4;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10028520	10029643	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=HG002_chrY_T0001020;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001020;transcript_name=HG002_chrY_T0001020;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001020:4;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10029644	10029935	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=HG002_chrY_T0001020;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001020;transcript_name=HG002_chrY_T0001020;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001020:5;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10015373	10019426	1000	-	.	source_transcript=ENST00000757627.1;source_transcript_name=TTTY7B-216;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757627.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757627.1;transcript_score=299.818;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757627.1,ENST00000757627.1;transcript_id=HG002_chrY_T0001021;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_G0000336;transcript_name=HG002_chrY_T0001021;gene_name=TTTY7B;ID=HG002_chrY_T0001021;Name=TTTY7B
HG002_chrY	CAT	exon	10015373	10015618	.	-	.	source_transcript=ENST00000757627.1;source_transcript_name=TTTY7B-216;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757627.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757627.1;transcript_score=299.818;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757627.1,ENST00000757627.1;transcript_id=HG002_chrY_T0001021;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001021;transcript_name=HG002_chrY_T0001021;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001021:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10015619	10019124	.	-	.	source_transcript=ENST00000757627.1;source_transcript_name=TTTY7B-216;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757627.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757627.1;transcript_score=299.818;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757627.1,ENST00000757627.1;transcript_id=HG002_chrY_T0001021;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001021;transcript_name=HG002_chrY_T0001021;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001021:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10019125	10019426	.	-	.	source_transcript=ENST00000757627.1;source_transcript_name=TTTY7B-216;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757627.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757627.1;transcript_score=299.818;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757627.1,ENST00000757627.1;transcript_id=HG002_chrY_T0001021;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001021;transcript_name=HG002_chrY_T0001021;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001021:1;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10015377	10027520	1000	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=299.876;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=HG002_chrY_T0001022;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_G0000336;transcript_name=HG002_chrY_T0001022;gene_name=TTTY7B;ID=HG002_chrY_T0001022;Name=TTTY7B
HG002_chrY	CAT	exon	10015377	10015618	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=HG002_chrY_T0001022;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001022;transcript_name=HG002_chrY_T0001022;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001022:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10015619	10017093	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=HG002_chrY_T0001022;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001022;transcript_name=HG002_chrY_T0001022;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001022:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10017094	10017207	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=HG002_chrY_T0001022;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001022;transcript_name=HG002_chrY_T0001022;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001022:1;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10017208	10020289	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=HG002_chrY_T0001022;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001022;transcript_name=HG002_chrY_T0001022;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001022:1;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10020290	10020364	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=HG002_chrY_T0001022;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001022;transcript_name=HG002_chrY_T0001022;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001022:2;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10020365	10022671	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=HG002_chrY_T0001022;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001022;transcript_name=HG002_chrY_T0001022;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001022:2;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10022672	10022753	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=HG002_chrY_T0001022;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001022;transcript_name=HG002_chrY_T0001022;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001022:3;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10022754	10027226	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=HG002_chrY_T0001022;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001022;transcript_name=HG002_chrY_T0001022;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001022:3;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10027227	10027520	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=HG002_chrY_T0001022;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001022;transcript_name=HG002_chrY_T0001022;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001022:4;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10022578	10029956	1000	-	.	source_transcript=ENST00000757621.1;source_transcript_name=TTTY7B-210;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757621.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757621.1,ENST00000757621.1;transcript_id=HG002_chrY_T0001023;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_G0000336;transcript_name=HG002_chrY_T0001023;gene_name=TTTY7B;ID=HG002_chrY_T0001023;Name=TTTY7B
HG002_chrY	CAT	exon	10022578	10022753	.	-	.	source_transcript=ENST00000757621.1;source_transcript_name=TTTY7B-210;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757621.1,ENST00000757621.1;transcript_id=HG002_chrY_T0001023;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001023;transcript_name=HG002_chrY_T0001023;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001023:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10022754	10028361	.	-	.	source_transcript=ENST00000757621.1;source_transcript_name=TTTY7B-210;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757621.1,ENST00000757621.1;transcript_id=HG002_chrY_T0001023;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001023;transcript_name=HG002_chrY_T0001023;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001023:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10028362	10028519	.	-	.	source_transcript=ENST00000757621.1;source_transcript_name=TTTY7B-210;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757621.1,ENST00000757621.1;transcript_id=HG002_chrY_T0001023;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001023;transcript_name=HG002_chrY_T0001023;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001023:1;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10028520	10029643	.	-	.	source_transcript=ENST00000757621.1;source_transcript_name=TTTY7B-210;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757621.1,ENST00000757621.1;transcript_id=HG002_chrY_T0001023;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001023;transcript_name=HG002_chrY_T0001023;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001023:1;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10029644	10029956	.	-	.	source_transcript=ENST00000757621.1;source_transcript_name=TTTY7B-210;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757621.1,ENST00000757621.1;transcript_id=HG002_chrY_T0001023;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001023;transcript_name=HG002_chrY_T0001023;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001023:2;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10022579	10029963	1000	-	.	source_transcript=ENST00000757620.1;source_transcript_name=TTTY7B-209;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757620.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757620.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757620.1,ENST00000757620.1;transcript_id=HG002_chrY_T0001024;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_G0000336;transcript_name=HG002_chrY_T0001024;gene_name=TTTY7B;ID=HG002_chrY_T0001024;Name=TTTY7B
HG002_chrY	CAT	exon	10022579	10022753	.	-	.	source_transcript=ENST00000757620.1;source_transcript_name=TTTY7B-209;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757620.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757620.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757620.1,ENST00000757620.1;transcript_id=HG002_chrY_T0001024;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001024;transcript_name=HG002_chrY_T0001024;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001024:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10022754	10029643	.	-	.	source_transcript=ENST00000757620.1;source_transcript_name=TTTY7B-209;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757620.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757620.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757620.1,ENST00000757620.1;transcript_id=HG002_chrY_T0001024;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001024;transcript_name=HG002_chrY_T0001024;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001024:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10029644	10029963	.	-	.	source_transcript=ENST00000757620.1;source_transcript_name=TTTY7B-209;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757620.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757620.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757620.1,ENST00000757620.1;transcript_id=HG002_chrY_T0001024;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001024;transcript_name=HG002_chrY_T0001024;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001024:1;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10022583	10029930	1000	-	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757623.1,ENST00000757623.1;transcript_id=HG002_chrY_T0001025;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_G0000336;transcript_name=HG002_chrY_T0001025;gene_name=TTTY7B;ID=HG002_chrY_T0001025;Name=TTTY7B
HG002_chrY	CAT	exon	10022583	10022753	.	-	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757623.1,ENST00000757623.1;transcript_id=HG002_chrY_T0001025;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001025;transcript_name=HG002_chrY_T0001025;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001025:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10022754	10025669	.	-	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757623.1,ENST00000757623.1;transcript_id=HG002_chrY_T0001025;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001025;transcript_name=HG002_chrY_T0001025;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001025:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10025670	10025776	.	-	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757623.1,ENST00000757623.1;transcript_id=HG002_chrY_T0001025;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001025;transcript_name=HG002_chrY_T0001025;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001025:1;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10025777	10026172	.	-	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757623.1,ENST00000757623.1;transcript_id=HG002_chrY_T0001025;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001025;transcript_name=HG002_chrY_T0001025;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001025:1;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10026173	10026306	.	-	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757623.1,ENST00000757623.1;transcript_id=HG002_chrY_T0001025;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001025;transcript_name=HG002_chrY_T0001025;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001025:2;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10026307	10029643	.	-	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757623.1,ENST00000757623.1;transcript_id=HG002_chrY_T0001025;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001025;transcript_name=HG002_chrY_T0001025;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001025:2;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10029644	10029930	.	-	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757623.1,ENST00000757623.1;transcript_id=HG002_chrY_T0001025;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001025;transcript_name=HG002_chrY_T0001025;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001025:3;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10022584	10029934	1000	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=HG002_chrY_T0001026;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_G0000336;transcript_name=HG002_chrY_T0001026;gene_name=TTTY7B;ID=HG002_chrY_T0001026;Name=TTTY7B
HG002_chrY	CAT	exon	10022584	10022753	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=HG002_chrY_T0001026;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001026;transcript_name=HG002_chrY_T0001026;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001026:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10022754	10025669	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=HG002_chrY_T0001026;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001026;transcript_name=HG002_chrY_T0001026;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001026:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10025670	10025776	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=HG002_chrY_T0001026;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001026;transcript_name=HG002_chrY_T0001026;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001026:1;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10025777	10026172	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=HG002_chrY_T0001026;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001026;transcript_name=HG002_chrY_T0001026;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001026:1;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10026173	10026306	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=HG002_chrY_T0001026;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001026;transcript_name=HG002_chrY_T0001026;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001026:2;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10026307	10028361	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=HG002_chrY_T0001026;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001026;transcript_name=HG002_chrY_T0001026;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001026:2;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10028362	10028519	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=HG002_chrY_T0001026;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001026;transcript_name=HG002_chrY_T0001026;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001026:3;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10028520	10029643	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=HG002_chrY_T0001026;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001026;transcript_name=HG002_chrY_T0001026;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001026:3;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10029644	10029934	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=HG002_chrY_T0001026;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001026;transcript_name=HG002_chrY_T0001026;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001026:4;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10022585	10029943	1000	-	.	source_transcript=ENST00000430228.2;source_transcript_name=TTTY7B-203;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430228.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430228.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000430228.2,ENST00000430228.2;transcript_id=HG002_chrY_T0001027;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_G0000336;transcript_name=HG002_chrY_T0001027;gene_name=TTTY7B;ID=HG002_chrY_T0001027;Name=TTTY7B
HG002_chrY	CAT	exon	10022585	10022753	.	-	.	source_transcript=ENST00000430228.2;source_transcript_name=TTTY7B-203;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430228.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430228.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000430228.2,ENST00000430228.2;transcript_id=HG002_chrY_T0001027;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001027;transcript_name=HG002_chrY_T0001027;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001027:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10022754	10026172	.	-	.	source_transcript=ENST00000430228.2;source_transcript_name=TTTY7B-203;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430228.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430228.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000430228.2,ENST00000430228.2;transcript_id=HG002_chrY_T0001027;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001027;transcript_name=HG002_chrY_T0001027;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001027:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10026173	10026306	.	-	.	source_transcript=ENST00000430228.2;source_transcript_name=TTTY7B-203;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430228.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430228.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000430228.2,ENST00000430228.2;transcript_id=HG002_chrY_T0001027;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001027;transcript_name=HG002_chrY_T0001027;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001027:1;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10026307	10029643	.	-	.	source_transcript=ENST00000430228.2;source_transcript_name=TTTY7B-203;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430228.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430228.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000430228.2,ENST00000430228.2;transcript_id=HG002_chrY_T0001027;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001027;transcript_name=HG002_chrY_T0001027;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001027:1;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10029644	10029943	.	-	.	source_transcript=ENST00000430228.2;source_transcript_name=TTTY7B-203;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430228.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430228.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000430228.2,ENST00000430228.2;transcript_id=HG002_chrY_T0001027;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001027;transcript_name=HG002_chrY_T0001027;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001027:2;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10022588	10029909	1000	-	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757625.1,ENST00000757625.1;transcript_id=HG002_chrY_T0001028;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_G0000336;transcript_name=HG002_chrY_T0001028;gene_name=TTTY7B;ID=HG002_chrY_T0001028;Name=TTTY7B
HG002_chrY	CAT	exon	10022588	10022753	.	-	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757625.1,ENST00000757625.1;transcript_id=HG002_chrY_T0001028;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001028;transcript_name=HG002_chrY_T0001028;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001028:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10022754	10026172	.	-	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757625.1,ENST00000757625.1;transcript_id=HG002_chrY_T0001028;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001028;transcript_name=HG002_chrY_T0001028;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001028:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10026173	10026306	.	-	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757625.1,ENST00000757625.1;transcript_id=HG002_chrY_T0001028;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001028;transcript_name=HG002_chrY_T0001028;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001028:1;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10026307	10028361	.	-	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757625.1,ENST00000757625.1;transcript_id=HG002_chrY_T0001028;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001028;transcript_name=HG002_chrY_T0001028;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001028:1;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10028362	10028519	.	-	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757625.1,ENST00000757625.1;transcript_id=HG002_chrY_T0001028;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001028;transcript_name=HG002_chrY_T0001028;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001028:2;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10028520	10029643	.	-	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757625.1,ENST00000757625.1;transcript_id=HG002_chrY_T0001028;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001028;transcript_name=HG002_chrY_T0001028;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001028:2;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10029644	10029909	.	-	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757625.1,ENST00000757625.1;transcript_id=HG002_chrY_T0001028;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001028;transcript_name=HG002_chrY_T0001028;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001028:3;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10022590	10029930	1000	-	.	source_transcript=ENST00000757624.1;source_transcript_name=TTTY7B-213;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757624.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757624.1,ENST00000757624.1;transcript_id=HG002_chrY_T0001029;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_G0000336;transcript_name=HG002_chrY_T0001029;gene_name=TTTY7B;ID=HG002_chrY_T0001029;Name=TTTY7B
HG002_chrY	CAT	exon	10022590	10022753	.	-	.	source_transcript=ENST00000757624.1;source_transcript_name=TTTY7B-213;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757624.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757624.1,ENST00000757624.1;transcript_id=HG002_chrY_T0001029;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001029;transcript_name=HG002_chrY_T0001029;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001029:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10022754	10025669	.	-	.	source_transcript=ENST00000757624.1;source_transcript_name=TTTY7B-213;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757624.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757624.1,ENST00000757624.1;transcript_id=HG002_chrY_T0001029;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001029;transcript_name=HG002_chrY_T0001029;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001029:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10025670	10025776	.	-	.	source_transcript=ENST00000757624.1;source_transcript_name=TTTY7B-213;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757624.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757624.1,ENST00000757624.1;transcript_id=HG002_chrY_T0001029;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001029;transcript_name=HG002_chrY_T0001029;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001029:1;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10025777	10029643	.	-	.	source_transcript=ENST00000757624.1;source_transcript_name=TTTY7B-213;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757624.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757624.1,ENST00000757624.1;transcript_id=HG002_chrY_T0001029;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001029;transcript_name=HG002_chrY_T0001029;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001029:1;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10029644	10029930	.	-	.	source_transcript=ENST00000757624.1;source_transcript_name=TTTY7B-213;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757624.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757624.1,ENST00000757624.1;transcript_id=HG002_chrY_T0001029;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001029;transcript_name=HG002_chrY_T0001029;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001029:2;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10022591	10032413	1000	-	.	source_transcript=ENST00000757619.1;source_transcript_name=TTTY7B-208;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757619.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757619.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757619.1,ENST00000757619.1;transcript_id=HG002_chrY_T0001030;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_G0000336;transcript_name=HG002_chrY_T0001030;gene_name=TTTY7B;ID=HG002_chrY_T0001030;Name=TTTY7B
HG002_chrY	CAT	exon	10022591	10022753	.	-	.	source_transcript=ENST00000757619.1;source_transcript_name=TTTY7B-208;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757619.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757619.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757619.1,ENST00000757619.1;transcript_id=HG002_chrY_T0001030;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001030;transcript_name=HG002_chrY_T0001030;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001030:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10022754	10028361	.	-	.	source_transcript=ENST00000757619.1;source_transcript_name=TTTY7B-208;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757619.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757619.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757619.1,ENST00000757619.1;transcript_id=HG002_chrY_T0001030;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001030;transcript_name=HG002_chrY_T0001030;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001030:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10028362	10028519	.	-	.	source_transcript=ENST00000757619.1;source_transcript_name=TTTY7B-208;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757619.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757619.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757619.1,ENST00000757619.1;transcript_id=HG002_chrY_T0001030;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001030;transcript_name=HG002_chrY_T0001030;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001030:1;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10028520	10032160	.	-	.	source_transcript=ENST00000757619.1;source_transcript_name=TTTY7B-208;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757619.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757619.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757619.1,ENST00000757619.1;transcript_id=HG002_chrY_T0001030;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001030;transcript_name=HG002_chrY_T0001030;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001030:1;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10032161	10032413	.	-	.	source_transcript=ENST00000757619.1;source_transcript_name=TTTY7B-208;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757619.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757619.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757619.1,ENST00000757619.1;transcript_id=HG002_chrY_T0001030;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001030;transcript_name=HG002_chrY_T0001030;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001030:2;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10022591	10027528	1000	-	.	source_transcript=ENST00000757626.1;source_transcript_name=TTTY7B-215;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757626.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757626.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757626.1,ENST00000757626.1;transcript_id=HG002_chrY_T0001031;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_G0000336;transcript_name=HG002_chrY_T0001031;gene_name=TTTY7B;ID=HG002_chrY_T0001031;Name=TTTY7B
HG002_chrY	CAT	exon	10022591	10022753	.	-	.	source_transcript=ENST00000757626.1;source_transcript_name=TTTY7B-215;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757626.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757626.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757626.1,ENST00000757626.1;transcript_id=HG002_chrY_T0001031;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001031;transcript_name=HG002_chrY_T0001031;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001031:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10022754	10027226	.	-	.	source_transcript=ENST00000757626.1;source_transcript_name=TTTY7B-215;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757626.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757626.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757626.1,ENST00000757626.1;transcript_id=HG002_chrY_T0001031;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001031;transcript_name=HG002_chrY_T0001031;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001031:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10027227	10027528	.	-	.	source_transcript=ENST00000757626.1;source_transcript_name=TTTY7B-215;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757626.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757626.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757626.1,ENST00000757626.1;transcript_id=HG002_chrY_T0001031;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001031;transcript_name=HG002_chrY_T0001031;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001031:1;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10022591	10024269	1000	-	.	source_transcript=ENST00000757629.1;source_transcript_name=TTTY7B-218;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757629.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757629.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757629.1,ENST00000757629.1;transcript_id=HG002_chrY_T0001032;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_G0000336;transcript_name=HG002_chrY_T0001032;gene_name=TTTY7B;ID=HG002_chrY_T0001032;Name=TTTY7B
HG002_chrY	CAT	exon	10022591	10022753	.	-	.	source_transcript=ENST00000757629.1;source_transcript_name=TTTY7B-218;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757629.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757629.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757629.1,ENST00000757629.1;transcript_id=HG002_chrY_T0001032;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001032;transcript_name=HG002_chrY_T0001032;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001032:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10022754	10023328	.	-	.	source_transcript=ENST00000757629.1;source_transcript_name=TTTY7B-218;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757629.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757629.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757629.1,ENST00000757629.1;transcript_id=HG002_chrY_T0001032;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001032;transcript_name=HG002_chrY_T0001032;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001032:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10023329	10024269	.	-	.	source_transcript=ENST00000757629.1;source_transcript_name=TTTY7B-218;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757629.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757629.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757629.1,ENST00000757629.1;transcript_id=HG002_chrY_T0001032;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001032;transcript_name=HG002_chrY_T0001032;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001032:1;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10026136	10029909	1000	-	.	source_transcript=ENST00000757628.1;source_transcript_name=TTTY7B-217;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757628.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757628.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757628.1,ENST00000757628.1;transcript_id=HG002_chrY_T0001034;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_G0000336;transcript_name=HG002_chrY_T0001034;gene_name=TTTY7B;ID=HG002_chrY_T0001034;Name=TTTY7B
HG002_chrY	CAT	exon	10026136	10026306	.	-	.	source_transcript=ENST00000757628.1;source_transcript_name=TTTY7B-217;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757628.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757628.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757628.1,ENST00000757628.1;transcript_id=HG002_chrY_T0001034;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001034;transcript_name=HG002_chrY_T0001034;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001034:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10026307	10029643	.	-	.	source_transcript=ENST00000757628.1;source_transcript_name=TTTY7B-217;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757628.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757628.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757628.1,ENST00000757628.1;transcript_id=HG002_chrY_T0001034;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001034;transcript_name=HG002_chrY_T0001034;gene_name=TTTY7B;ID=intron:HG002_chrY_T0001034:0;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10029644	10029909	.	-	.	source_transcript=ENST00000757628.1;source_transcript_name=TTTY7B-217;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757628.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757628.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757628.1,ENST00000757628.1;transcript_id=HG002_chrY_T0001034;gene_id=HG002_chrY_G0000336;Parent=HG002_chrY_T0001034;transcript_name=HG002_chrY_T0001034;gene_name=TTTY7B;ID=exon:HG002_chrY_T0001034:1;Name=TTTY7B;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	10025711	10067221	.	+	.	source_gene_common_name=TTTY2;source_gene=ENSG00000212855.6;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;gene_id=HG002_chrY_G0000337;gene_biotype=lncRNA;gene_name=TTTY2;gene_sources=liftoff;ID=HG002_chrY_G0000337;Name=TTTY2
HG002_chrY	CAT	transcript	10025711	10066869	1000	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=HG002_chrY_T0001033;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_G0000337;transcript_name=HG002_chrY_T0001033;gene_name=TTTY2;ID=HG002_chrY_T0001033;Name=TTTY2
HG002_chrY	CAT	exon	10025711	10025896	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=HG002_chrY_T0001033;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001033;transcript_name=HG002_chrY_T0001033;gene_name=TTTY2;ID=exon:HG002_chrY_T0001033:0;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10025897	10026926	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=HG002_chrY_T0001033;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001033;transcript_name=HG002_chrY_T0001033;gene_name=TTTY2;ID=intron:HG002_chrY_T0001033:0;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10026927	10027833	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=HG002_chrY_T0001033;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001033;transcript_name=HG002_chrY_T0001033;gene_name=TTTY2;ID=exon:HG002_chrY_T0001033:1;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10027834	10050873	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=HG002_chrY_T0001033;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001033;transcript_name=HG002_chrY_T0001033;gene_name=TTTY2;ID=intron:HG002_chrY_T0001033:1;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10050874	10050951	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=HG002_chrY_T0001033;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001033;transcript_name=HG002_chrY_T0001033;gene_name=TTTY2;ID=exon:HG002_chrY_T0001033:2;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10050952	10060908	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=HG002_chrY_T0001033;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001033;transcript_name=HG002_chrY_T0001033;gene_name=TTTY2;ID=intron:HG002_chrY_T0001033:2;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10060909	10061057	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=HG002_chrY_T0001033;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001033;transcript_name=HG002_chrY_T0001033;gene_name=TTTY2;ID=exon:HG002_chrY_T0001033:3;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10061058	10061749	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=HG002_chrY_T0001033;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001033;transcript_name=HG002_chrY_T0001033;gene_name=TTTY2;ID=intron:HG002_chrY_T0001033:3;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10061750	10061906	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=HG002_chrY_T0001033;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001033;transcript_name=HG002_chrY_T0001033;gene_name=TTTY2;ID=exon:HG002_chrY_T0001033:4;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10061907	10064736	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=HG002_chrY_T0001033;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001033;transcript_name=HG002_chrY_T0001033;gene_name=TTTY2;ID=intron:HG002_chrY_T0001033:4;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10064737	10064815	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=HG002_chrY_T0001033;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001033;transcript_name=HG002_chrY_T0001033;gene_name=TTTY2;ID=exon:HG002_chrY_T0001033:5;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10064816	10064935	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=HG002_chrY_T0001033;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001033;transcript_name=HG002_chrY_T0001033;gene_name=TTTY2;ID=intron:HG002_chrY_T0001033:5;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10064936	10065133	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=HG002_chrY_T0001033;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001033;transcript_name=HG002_chrY_T0001033;gene_name=TTTY2;ID=exon:HG002_chrY_T0001033:6;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10065134	10066356	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=HG002_chrY_T0001033;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001033;transcript_name=HG002_chrY_T0001033;gene_name=TTTY2;ID=intron:HG002_chrY_T0001033:6;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10066357	10066869	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=HG002_chrY_T0001033;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001033;transcript_name=HG002_chrY_T0001033;gene_name=TTTY2;ID=exon:HG002_chrY_T0001033:7;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10027617	10067036	1000	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=HG002_chrY_T0001035;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_G0000337;transcript_name=HG002_chrY_T0001035;gene_name=TTTY2;ID=HG002_chrY_T0001035;Name=TTTY2
HG002_chrY	CAT	exon	10027617	10027833	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=HG002_chrY_T0001035;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001035;transcript_name=HG002_chrY_T0001035;gene_name=TTTY2;ID=exon:HG002_chrY_T0001035:0;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10027834	10044137	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=HG002_chrY_T0001035;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001035;transcript_name=HG002_chrY_T0001035;gene_name=TTTY2;ID=intron:HG002_chrY_T0001035:0;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10044138	10044348	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=HG002_chrY_T0001035;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001035;transcript_name=HG002_chrY_T0001035;gene_name=TTTY2;ID=exon:HG002_chrY_T0001035:1;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10044349	10050873	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=HG002_chrY_T0001035;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001035;transcript_name=HG002_chrY_T0001035;gene_name=TTTY2;ID=intron:HG002_chrY_T0001035:1;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10050874	10050951	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=HG002_chrY_T0001035;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001035;transcript_name=HG002_chrY_T0001035;gene_name=TTTY2;ID=exon:HG002_chrY_T0001035:2;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10050952	10060908	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=HG002_chrY_T0001035;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001035;transcript_name=HG002_chrY_T0001035;gene_name=TTTY2;ID=intron:HG002_chrY_T0001035:2;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10060909	10061057	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=HG002_chrY_T0001035;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001035;transcript_name=HG002_chrY_T0001035;gene_name=TTTY2;ID=exon:HG002_chrY_T0001035:3;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10061058	10061749	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=HG002_chrY_T0001035;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001035;transcript_name=HG002_chrY_T0001035;gene_name=TTTY2;ID=intron:HG002_chrY_T0001035:3;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10061750	10061906	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=HG002_chrY_T0001035;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001035;transcript_name=HG002_chrY_T0001035;gene_name=TTTY2;ID=exon:HG002_chrY_T0001035:4;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10061907	10064736	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=HG002_chrY_T0001035;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001035;transcript_name=HG002_chrY_T0001035;gene_name=TTTY2;ID=intron:HG002_chrY_T0001035:4;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10064737	10064815	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=HG002_chrY_T0001035;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001035;transcript_name=HG002_chrY_T0001035;gene_name=TTTY2;ID=exon:HG002_chrY_T0001035:5;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10064816	10064935	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=HG002_chrY_T0001035;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001035;transcript_name=HG002_chrY_T0001035;gene_name=TTTY2;ID=intron:HG002_chrY_T0001035:5;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10064936	10065133	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=HG002_chrY_T0001035;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001035;transcript_name=HG002_chrY_T0001035;gene_name=TTTY2;ID=exon:HG002_chrY_T0001035:6;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10065134	10066356	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=HG002_chrY_T0001035;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001035;transcript_name=HG002_chrY_T0001035;gene_name=TTTY2;ID=intron:HG002_chrY_T0001035:6;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10066357	10067036	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=HG002_chrY_T0001035;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001035;transcript_name=HG002_chrY_T0001035;gene_name=TTTY2;ID=exon:HG002_chrY_T0001035:7;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10027633	10067221	1000	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG002_chrY_T0001036;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_G0000337;transcript_name=HG002_chrY_T0001036;gene_name=TTTY2;ID=HG002_chrY_T0001036;Name=TTTY2
HG002_chrY	CAT	exon	10027633	10027833	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG002_chrY_T0001036;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001036;transcript_name=HG002_chrY_T0001036;gene_name=TTTY2;ID=exon:HG002_chrY_T0001036:0;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10027834	10043875	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG002_chrY_T0001036;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001036;transcript_name=HG002_chrY_T0001036;gene_name=TTTY2;ID=intron:HG002_chrY_T0001036:0;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10043876	10043963	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG002_chrY_T0001036;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001036;transcript_name=HG002_chrY_T0001036;gene_name=TTTY2;ID=exon:HG002_chrY_T0001036:1;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10043964	10044137	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG002_chrY_T0001036;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001036;transcript_name=HG002_chrY_T0001036;gene_name=TTTY2;ID=intron:HG002_chrY_T0001036:1;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10044138	10044348	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG002_chrY_T0001036;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001036;transcript_name=HG002_chrY_T0001036;gene_name=TTTY2;ID=exon:HG002_chrY_T0001036:2;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10044349	10050873	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG002_chrY_T0001036;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001036;transcript_name=HG002_chrY_T0001036;gene_name=TTTY2;ID=intron:HG002_chrY_T0001036:2;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10050874	10050951	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG002_chrY_T0001036;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001036;transcript_name=HG002_chrY_T0001036;gene_name=TTTY2;ID=exon:HG002_chrY_T0001036:3;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10050952	10052971	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG002_chrY_T0001036;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001036;transcript_name=HG002_chrY_T0001036;gene_name=TTTY2;ID=intron:HG002_chrY_T0001036:3;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10052972	10053076	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG002_chrY_T0001036;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001036;transcript_name=HG002_chrY_T0001036;gene_name=TTTY2;ID=exon:HG002_chrY_T0001036:4;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10053077	10053427	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG002_chrY_T0001036;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001036;transcript_name=HG002_chrY_T0001036;gene_name=TTTY2;ID=intron:HG002_chrY_T0001036:4;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10053428	10053514	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG002_chrY_T0001036;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001036;transcript_name=HG002_chrY_T0001036;gene_name=TTTY2;ID=exon:HG002_chrY_T0001036:5;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10053515	10060908	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG002_chrY_T0001036;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001036;transcript_name=HG002_chrY_T0001036;gene_name=TTTY2;ID=intron:HG002_chrY_T0001036:5;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10060909	10061136	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG002_chrY_T0001036;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001036;transcript_name=HG002_chrY_T0001036;gene_name=TTTY2;ID=exon:HG002_chrY_T0001036:6;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10061137	10061749	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG002_chrY_T0001036;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001036;transcript_name=HG002_chrY_T0001036;gene_name=TTTY2;ID=intron:HG002_chrY_T0001036:6;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10061750	10061906	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG002_chrY_T0001036;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001036;transcript_name=HG002_chrY_T0001036;gene_name=TTTY2;ID=exon:HG002_chrY_T0001036:7;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10061907	10064935	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG002_chrY_T0001036;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001036;transcript_name=HG002_chrY_T0001036;gene_name=TTTY2;ID=intron:HG002_chrY_T0001036:7;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10064936	10065133	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG002_chrY_T0001036;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001036;transcript_name=HG002_chrY_T0001036;gene_name=TTTY2;ID=exon:HG002_chrY_T0001036:8;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10065134	10066356	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG002_chrY_T0001036;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001036;transcript_name=HG002_chrY_T0001036;gene_name=TTTY2;ID=intron:HG002_chrY_T0001036:8;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10066357	10067221	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=HG002_chrY_T0001036;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001036;transcript_name=HG002_chrY_T0001036;gene_name=TTTY2;ID=exon:HG002_chrY_T0001036:9;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10030064	10067033	1000	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=HG002_chrY_T0001037;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_G0000337;transcript_name=HG002_chrY_T0001037;gene_name=TTTY2;ID=HG002_chrY_T0001037;Name=TTTY2
HG002_chrY	CAT	exon	10030064	10030248	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=HG002_chrY_T0001037;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001037;transcript_name=HG002_chrY_T0001037;gene_name=TTTY2;ID=exon:HG002_chrY_T0001037:0;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10030249	10043875	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=HG002_chrY_T0001037;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001037;transcript_name=HG002_chrY_T0001037;gene_name=TTTY2;ID=intron:HG002_chrY_T0001037:0;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10043876	10043963	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=HG002_chrY_T0001037;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001037;transcript_name=HG002_chrY_T0001037;gene_name=TTTY2;ID=exon:HG002_chrY_T0001037:1;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10043964	10044137	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=HG002_chrY_T0001037;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001037;transcript_name=HG002_chrY_T0001037;gene_name=TTTY2;ID=intron:HG002_chrY_T0001037:1;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10044138	10044348	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=HG002_chrY_T0001037;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001037;transcript_name=HG002_chrY_T0001037;gene_name=TTTY2;ID=exon:HG002_chrY_T0001037:2;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10044349	10050873	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=HG002_chrY_T0001037;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001037;transcript_name=HG002_chrY_T0001037;gene_name=TTTY2;ID=intron:HG002_chrY_T0001037:2;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10050874	10050951	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=HG002_chrY_T0001037;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001037;transcript_name=HG002_chrY_T0001037;gene_name=TTTY2;ID=exon:HG002_chrY_T0001037:3;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10050952	10060908	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=HG002_chrY_T0001037;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001037;transcript_name=HG002_chrY_T0001037;gene_name=TTTY2;ID=intron:HG002_chrY_T0001037:3;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10060909	10061057	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=HG002_chrY_T0001037;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001037;transcript_name=HG002_chrY_T0001037;gene_name=TTTY2;ID=exon:HG002_chrY_T0001037:4;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10061058	10061749	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=HG002_chrY_T0001037;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001037;transcript_name=HG002_chrY_T0001037;gene_name=TTTY2;ID=intron:HG002_chrY_T0001037:4;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10061750	10061906	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=HG002_chrY_T0001037;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001037;transcript_name=HG002_chrY_T0001037;gene_name=TTTY2;ID=exon:HG002_chrY_T0001037:5;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10061907	10064935	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=HG002_chrY_T0001037;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001037;transcript_name=HG002_chrY_T0001037;gene_name=TTTY2;ID=intron:HG002_chrY_T0001037:5;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10064936	10065133	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=HG002_chrY_T0001037;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001037;transcript_name=HG002_chrY_T0001037;gene_name=TTTY2;ID=exon:HG002_chrY_T0001037:6;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10065134	10066356	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=HG002_chrY_T0001037;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001037;transcript_name=HG002_chrY_T0001037;gene_name=TTTY2;ID=intron:HG002_chrY_T0001037:6;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10066357	10067033	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=HG002_chrY_T0001037;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001037;transcript_name=HG002_chrY_T0001037;gene_name=TTTY2;ID=exon:HG002_chrY_T0001037:7;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10044828	10067221	1000	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=HG002_chrY_T0001038;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_G0000337;transcript_name=HG002_chrY_T0001038;gene_name=TTTY2;ID=HG002_chrY_T0001038;Name=TTTY2
HG002_chrY	CAT	exon	10044828	10045039	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=HG002_chrY_T0001038;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001038;transcript_name=HG002_chrY_T0001038;gene_name=TTTY2;ID=exon:HG002_chrY_T0001038:0;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10045040	10050873	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=HG002_chrY_T0001038;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001038;transcript_name=HG002_chrY_T0001038;gene_name=TTTY2;ID=intron:HG002_chrY_T0001038:0;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10050874	10050951	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=HG002_chrY_T0001038;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001038;transcript_name=HG002_chrY_T0001038;gene_name=TTTY2;ID=exon:HG002_chrY_T0001038:1;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10050952	10052971	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=HG002_chrY_T0001038;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001038;transcript_name=HG002_chrY_T0001038;gene_name=TTTY2;ID=intron:HG002_chrY_T0001038:1;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10052972	10053076	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=HG002_chrY_T0001038;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001038;transcript_name=HG002_chrY_T0001038;gene_name=TTTY2;ID=exon:HG002_chrY_T0001038:2;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10053077	10053427	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=HG002_chrY_T0001038;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001038;transcript_name=HG002_chrY_T0001038;gene_name=TTTY2;ID=intron:HG002_chrY_T0001038:2;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10053428	10053514	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=HG002_chrY_T0001038;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001038;transcript_name=HG002_chrY_T0001038;gene_name=TTTY2;ID=exon:HG002_chrY_T0001038:3;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10053515	10060908	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=HG002_chrY_T0001038;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001038;transcript_name=HG002_chrY_T0001038;gene_name=TTTY2;ID=intron:HG002_chrY_T0001038:3;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10060909	10061057	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=HG002_chrY_T0001038;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001038;transcript_name=HG002_chrY_T0001038;gene_name=TTTY2;ID=exon:HG002_chrY_T0001038:4;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10061058	10061749	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=HG002_chrY_T0001038;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001038;transcript_name=HG002_chrY_T0001038;gene_name=TTTY2;ID=intron:HG002_chrY_T0001038:4;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10061750	10061906	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=HG002_chrY_T0001038;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001038;transcript_name=HG002_chrY_T0001038;gene_name=TTTY2;ID=exon:HG002_chrY_T0001038:5;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10061907	10064935	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=HG002_chrY_T0001038;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001038;transcript_name=HG002_chrY_T0001038;gene_name=TTTY2;ID=intron:HG002_chrY_T0001038:5;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10064936	10065133	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=HG002_chrY_T0001038;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001038;transcript_name=HG002_chrY_T0001038;gene_name=TTTY2;ID=exon:HG002_chrY_T0001038:6;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10065134	10066356	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=HG002_chrY_T0001038;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001038;transcript_name=HG002_chrY_T0001038;gene_name=TTTY2;ID=intron:HG002_chrY_T0001038:6;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10066357	10067221	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=HG002_chrY_T0001038;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001038;transcript_name=HG002_chrY_T0001038;gene_name=TTTY2;ID=exon:HG002_chrY_T0001038:7;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10044829	10067221	1000	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG002_chrY_T0001039;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_G0000337;transcript_name=HG002_chrY_T0001039;gene_name=TTTY2;ID=HG002_chrY_T0001039;Name=TTTY2
HG002_chrY	CAT	exon	10044829	10045033	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG002_chrY_T0001039;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001039;transcript_name=HG002_chrY_T0001039;gene_name=TTTY2;ID=exon:HG002_chrY_T0001039:0;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10045034	10050873	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG002_chrY_T0001039;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001039;transcript_name=HG002_chrY_T0001039;gene_name=TTTY2;ID=intron:HG002_chrY_T0001039:0;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10050874	10050951	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG002_chrY_T0001039;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001039;transcript_name=HG002_chrY_T0001039;gene_name=TTTY2;ID=exon:HG002_chrY_T0001039:1;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10050952	10060908	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG002_chrY_T0001039;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001039;transcript_name=HG002_chrY_T0001039;gene_name=TTTY2;ID=intron:HG002_chrY_T0001039:1;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10060909	10061136	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG002_chrY_T0001039;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001039;transcript_name=HG002_chrY_T0001039;gene_name=TTTY2;ID=exon:HG002_chrY_T0001039:2;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10061137	10061749	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG002_chrY_T0001039;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001039;transcript_name=HG002_chrY_T0001039;gene_name=TTTY2;ID=intron:HG002_chrY_T0001039:2;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10061750	10061906	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG002_chrY_T0001039;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001039;transcript_name=HG002_chrY_T0001039;gene_name=TTTY2;ID=exon:HG002_chrY_T0001039:3;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10061907	10062427	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG002_chrY_T0001039;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001039;transcript_name=HG002_chrY_T0001039;gene_name=TTTY2;ID=intron:HG002_chrY_T0001039:3;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10062428	10062522	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG002_chrY_T0001039;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001039;transcript_name=HG002_chrY_T0001039;gene_name=TTTY2;ID=exon:HG002_chrY_T0001039:4;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10062523	10062885	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG002_chrY_T0001039;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001039;transcript_name=HG002_chrY_T0001039;gene_name=TTTY2;ID=intron:HG002_chrY_T0001039:4;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10062886	10063103	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG002_chrY_T0001039;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001039;transcript_name=HG002_chrY_T0001039;gene_name=TTTY2;ID=exon:HG002_chrY_T0001039:5;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10063104	10064736	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG002_chrY_T0001039;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001039;transcript_name=HG002_chrY_T0001039;gene_name=TTTY2;ID=intron:HG002_chrY_T0001039:5;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10064737	10064815	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG002_chrY_T0001039;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001039;transcript_name=HG002_chrY_T0001039;gene_name=TTTY2;ID=exon:HG002_chrY_T0001039:6;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10064816	10064935	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG002_chrY_T0001039;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001039;transcript_name=HG002_chrY_T0001039;gene_name=TTTY2;ID=intron:HG002_chrY_T0001039:6;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10064936	10065133	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG002_chrY_T0001039;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001039;transcript_name=HG002_chrY_T0001039;gene_name=TTTY2;ID=exon:HG002_chrY_T0001039:7;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10065134	10066356	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG002_chrY_T0001039;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001039;transcript_name=HG002_chrY_T0001039;gene_name=TTTY2;ID=intron:HG002_chrY_T0001039:7;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10066357	10067221	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=HG002_chrY_T0001039;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001039;transcript_name=HG002_chrY_T0001039;gene_name=TTTY2;ID=exon:HG002_chrY_T0001039:8;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10044829	10067221	1000	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=HG002_chrY_T0001040;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_G0000337;transcript_name=HG002_chrY_T0001040;gene_name=TTTY2;ID=HG002_chrY_T0001040;Name=TTTY2
HG002_chrY	CAT	exon	10044829	10045039	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=HG002_chrY_T0001040;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001040;transcript_name=HG002_chrY_T0001040;gene_name=TTTY2;ID=exon:HG002_chrY_T0001040:0;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10045040	10050873	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=HG002_chrY_T0001040;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001040;transcript_name=HG002_chrY_T0001040;gene_name=TTTY2;ID=intron:HG002_chrY_T0001040:0;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10050874	10050951	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=HG002_chrY_T0001040;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001040;transcript_name=HG002_chrY_T0001040;gene_name=TTTY2;ID=exon:HG002_chrY_T0001040:1;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10050952	10060908	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=HG002_chrY_T0001040;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001040;transcript_name=HG002_chrY_T0001040;gene_name=TTTY2;ID=intron:HG002_chrY_T0001040:1;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10060909	10061057	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=HG002_chrY_T0001040;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001040;transcript_name=HG002_chrY_T0001040;gene_name=TTTY2;ID=exon:HG002_chrY_T0001040:2;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10061058	10061749	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=HG002_chrY_T0001040;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001040;transcript_name=HG002_chrY_T0001040;gene_name=TTTY2;ID=intron:HG002_chrY_T0001040:2;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10061750	10061906	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=HG002_chrY_T0001040;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001040;transcript_name=HG002_chrY_T0001040;gene_name=TTTY2;ID=exon:HG002_chrY_T0001040:3;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10061907	10064935	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=HG002_chrY_T0001040;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001040;transcript_name=HG002_chrY_T0001040;gene_name=TTTY2;ID=intron:HG002_chrY_T0001040:3;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10064936	10065133	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=HG002_chrY_T0001040;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001040;transcript_name=HG002_chrY_T0001040;gene_name=TTTY2;ID=exon:HG002_chrY_T0001040:4;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10065134	10066356	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=HG002_chrY_T0001040;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001040;transcript_name=HG002_chrY_T0001040;gene_name=TTTY2;ID=intron:HG002_chrY_T0001040:4;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10066357	10067221	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=HG002_chrY_T0001040;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001040;transcript_name=HG002_chrY_T0001040;gene_name=TTTY2;ID=exon:HG002_chrY_T0001040:5;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10044841	10067221	1000	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=HG002_chrY_T0001041;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_G0000337;transcript_name=HG002_chrY_T0001041;gene_name=TTTY2;ID=HG002_chrY_T0001041;Name=TTTY2
HG002_chrY	CAT	exon	10044841	10045039	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=HG002_chrY_T0001041;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001041;transcript_name=HG002_chrY_T0001041;gene_name=TTTY2;ID=exon:HG002_chrY_T0001041:0;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10045040	10050873	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=HG002_chrY_T0001041;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001041;transcript_name=HG002_chrY_T0001041;gene_name=TTTY2;ID=intron:HG002_chrY_T0001041:0;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10050874	10050951	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=HG002_chrY_T0001041;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001041;transcript_name=HG002_chrY_T0001041;gene_name=TTTY2;ID=exon:HG002_chrY_T0001041:1;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10050952	10053427	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=HG002_chrY_T0001041;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001041;transcript_name=HG002_chrY_T0001041;gene_name=TTTY2;ID=intron:HG002_chrY_T0001041:1;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10053428	10053514	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=HG002_chrY_T0001041;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001041;transcript_name=HG002_chrY_T0001041;gene_name=TTTY2;ID=exon:HG002_chrY_T0001041:2;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10053515	10060908	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=HG002_chrY_T0001041;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001041;transcript_name=HG002_chrY_T0001041;gene_name=TTTY2;ID=intron:HG002_chrY_T0001041:2;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10060909	10061057	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=HG002_chrY_T0001041;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001041;transcript_name=HG002_chrY_T0001041;gene_name=TTTY2;ID=exon:HG002_chrY_T0001041:3;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10061058	10061749	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=HG002_chrY_T0001041;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001041;transcript_name=HG002_chrY_T0001041;gene_name=TTTY2;ID=intron:HG002_chrY_T0001041:3;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10061750	10061906	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=HG002_chrY_T0001041;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001041;transcript_name=HG002_chrY_T0001041;gene_name=TTTY2;ID=exon:HG002_chrY_T0001041:4;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10061907	10064736	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=HG002_chrY_T0001041;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001041;transcript_name=HG002_chrY_T0001041;gene_name=TTTY2;ID=intron:HG002_chrY_T0001041:4;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10064737	10064815	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=HG002_chrY_T0001041;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001041;transcript_name=HG002_chrY_T0001041;gene_name=TTTY2;ID=exon:HG002_chrY_T0001041:5;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10064816	10064935	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=HG002_chrY_T0001041;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001041;transcript_name=HG002_chrY_T0001041;gene_name=TTTY2;ID=intron:HG002_chrY_T0001041:5;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10064936	10065133	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=HG002_chrY_T0001041;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001041;transcript_name=HG002_chrY_T0001041;gene_name=TTTY2;ID=exon:HG002_chrY_T0001041:6;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10065134	10066356	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=HG002_chrY_T0001041;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001041;transcript_name=HG002_chrY_T0001041;gene_name=TTTY2;ID=intron:HG002_chrY_T0001041:6;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10066357	10067221	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=HG002_chrY_T0001041;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001041;transcript_name=HG002_chrY_T0001041;gene_name=TTTY2;ID=exon:HG002_chrY_T0001041:7;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10044841	10067032	1000	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=HG002_chrY_T0001042;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_G0000337;transcript_name=HG002_chrY_T0001042;gene_name=TTTY2;ID=HG002_chrY_T0001042;Name=TTTY2
HG002_chrY	CAT	exon	10044841	10045039	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=HG002_chrY_T0001042;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001042;transcript_name=HG002_chrY_T0001042;gene_name=TTTY2;ID=exon:HG002_chrY_T0001042:0;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10045040	10050873	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=HG002_chrY_T0001042;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001042;transcript_name=HG002_chrY_T0001042;gene_name=TTTY2;ID=intron:HG002_chrY_T0001042:0;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10050874	10050951	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=HG002_chrY_T0001042;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001042;transcript_name=HG002_chrY_T0001042;gene_name=TTTY2;ID=exon:HG002_chrY_T0001042:1;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10050952	10060908	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=HG002_chrY_T0001042;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001042;transcript_name=HG002_chrY_T0001042;gene_name=TTTY2;ID=intron:HG002_chrY_T0001042:1;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10060909	10061136	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=HG002_chrY_T0001042;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001042;transcript_name=HG002_chrY_T0001042;gene_name=TTTY2;ID=exon:HG002_chrY_T0001042:2;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10061137	10061749	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=HG002_chrY_T0001042;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001042;transcript_name=HG002_chrY_T0001042;gene_name=TTTY2;ID=intron:HG002_chrY_T0001042:2;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10061750	10061906	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=HG002_chrY_T0001042;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001042;transcript_name=HG002_chrY_T0001042;gene_name=TTTY2;ID=exon:HG002_chrY_T0001042:3;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10061907	10064935	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=HG002_chrY_T0001042;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001042;transcript_name=HG002_chrY_T0001042;gene_name=TTTY2;ID=intron:HG002_chrY_T0001042:3;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10064936	10065133	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=HG002_chrY_T0001042;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001042;transcript_name=HG002_chrY_T0001042;gene_name=TTTY2;ID=exon:HG002_chrY_T0001042:4;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10065134	10066356	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=HG002_chrY_T0001042;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001042;transcript_name=HG002_chrY_T0001042;gene_name=TTTY2;ID=intron:HG002_chrY_T0001042:4;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10066357	10067032	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=HG002_chrY_T0001042;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001042;transcript_name=HG002_chrY_T0001042;gene_name=TTTY2;ID=exon:HG002_chrY_T0001042:5;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10044850	10066501	1000	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=HG002_chrY_T0001043;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_G0000337;transcript_name=HG002_chrY_T0001043;gene_name=TTTY2;ID=HG002_chrY_T0001043;Name=TTTY2
HG002_chrY	CAT	exon	10044850	10045039	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=HG002_chrY_T0001043;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001043;transcript_name=HG002_chrY_T0001043;gene_name=TTTY2;ID=exon:HG002_chrY_T0001043:0;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10045040	10050873	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=HG002_chrY_T0001043;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001043;transcript_name=HG002_chrY_T0001043;gene_name=TTTY2;ID=intron:HG002_chrY_T0001043:0;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10050874	10050951	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=HG002_chrY_T0001043;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001043;transcript_name=HG002_chrY_T0001043;gene_name=TTTY2;ID=exon:HG002_chrY_T0001043:1;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10050952	10053427	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=HG002_chrY_T0001043;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001043;transcript_name=HG002_chrY_T0001043;gene_name=TTTY2;ID=intron:HG002_chrY_T0001043:1;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10053428	10053514	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=HG002_chrY_T0001043;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001043;transcript_name=HG002_chrY_T0001043;gene_name=TTTY2;ID=exon:HG002_chrY_T0001043:2;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10053515	10060908	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=HG002_chrY_T0001043;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001043;transcript_name=HG002_chrY_T0001043;gene_name=TTTY2;ID=intron:HG002_chrY_T0001043:2;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10060909	10061136	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=HG002_chrY_T0001043;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001043;transcript_name=HG002_chrY_T0001043;gene_name=TTTY2;ID=exon:HG002_chrY_T0001043:3;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10061137	10061749	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=HG002_chrY_T0001043;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001043;transcript_name=HG002_chrY_T0001043;gene_name=TTTY2;ID=intron:HG002_chrY_T0001043:3;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10061750	10061906	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=HG002_chrY_T0001043;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001043;transcript_name=HG002_chrY_T0001043;gene_name=TTTY2;ID=exon:HG002_chrY_T0001043:4;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10061907	10064935	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=HG002_chrY_T0001043;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001043;transcript_name=HG002_chrY_T0001043;gene_name=TTTY2;ID=intron:HG002_chrY_T0001043:4;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10064936	10065133	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=HG002_chrY_T0001043;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001043;transcript_name=HG002_chrY_T0001043;gene_name=TTTY2;ID=exon:HG002_chrY_T0001043:5;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10065134	10066356	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=HG002_chrY_T0001043;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001043;transcript_name=HG002_chrY_T0001043;gene_name=TTTY2;ID=intron:HG002_chrY_T0001043:5;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10066357	10066501	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=HG002_chrY_T0001043;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001043;transcript_name=HG002_chrY_T0001043;gene_name=TTTY2;ID=exon:HG002_chrY_T0001043:6;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10049134	10067036	1000	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=HG002_chrY_T0001044;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_G0000337;transcript_name=HG002_chrY_T0001044;gene_name=TTTY2;ID=HG002_chrY_T0001044;Name=TTTY2
HG002_chrY	CAT	exon	10049134	10050951	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=HG002_chrY_T0001044;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001044;transcript_name=HG002_chrY_T0001044;gene_name=TTTY2;ID=exon:HG002_chrY_T0001044:0;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10050952	10053427	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=HG002_chrY_T0001044;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001044;transcript_name=HG002_chrY_T0001044;gene_name=TTTY2;ID=intron:HG002_chrY_T0001044:0;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10053428	10053514	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=HG002_chrY_T0001044;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001044;transcript_name=HG002_chrY_T0001044;gene_name=TTTY2;ID=exon:HG002_chrY_T0001044:1;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10053515	10060908	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=HG002_chrY_T0001044;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001044;transcript_name=HG002_chrY_T0001044;gene_name=TTTY2;ID=intron:HG002_chrY_T0001044:1;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10060909	10061057	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=HG002_chrY_T0001044;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001044;transcript_name=HG002_chrY_T0001044;gene_name=TTTY2;ID=exon:HG002_chrY_T0001044:2;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10061058	10061749	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=HG002_chrY_T0001044;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001044;transcript_name=HG002_chrY_T0001044;gene_name=TTTY2;ID=intron:HG002_chrY_T0001044:2;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10061750	10061906	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=HG002_chrY_T0001044;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001044;transcript_name=HG002_chrY_T0001044;gene_name=TTTY2;ID=exon:HG002_chrY_T0001044:3;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10061907	10064736	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=HG002_chrY_T0001044;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001044;transcript_name=HG002_chrY_T0001044;gene_name=TTTY2;ID=intron:HG002_chrY_T0001044:3;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10064737	10064815	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=HG002_chrY_T0001044;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001044;transcript_name=HG002_chrY_T0001044;gene_name=TTTY2;ID=exon:HG002_chrY_T0001044:4;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10064816	10064935	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=HG002_chrY_T0001044;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001044;transcript_name=HG002_chrY_T0001044;gene_name=TTTY2;ID=intron:HG002_chrY_T0001044:4;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10064936	10065133	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=HG002_chrY_T0001044;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001044;transcript_name=HG002_chrY_T0001044;gene_name=TTTY2;ID=exon:HG002_chrY_T0001044:5;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10065134	10066356	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=HG002_chrY_T0001044;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001044;transcript_name=HG002_chrY_T0001044;gene_name=TTTY2;ID=intron:HG002_chrY_T0001044:5;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10066357	10067036	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=HG002_chrY_T0001044;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001044;transcript_name=HG002_chrY_T0001044;gene_name=TTTY2;ID=exon:HG002_chrY_T0001044:6;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10058653	10061997	1000	+	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757472.1,ENST00000757472.1;transcript_id=HG002_chrY_T0001045;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_G0000337;transcript_name=HG002_chrY_T0001045;gene_name=TTTY2;ID=HG002_chrY_T0001045;Name=TTTY2
HG002_chrY	CAT	exon	10058653	10058796	.	+	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757472.1,ENST00000757472.1;transcript_id=HG002_chrY_T0001045;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001045;transcript_name=HG002_chrY_T0001045;gene_name=TTTY2;ID=exon:HG002_chrY_T0001045:0;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10058797	10060529	.	+	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757472.1,ENST00000757472.1;transcript_id=HG002_chrY_T0001045;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001045;transcript_name=HG002_chrY_T0001045;gene_name=TTTY2;ID=intron:HG002_chrY_T0001045:0;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10060530	10060616	.	+	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757472.1,ENST00000757472.1;transcript_id=HG002_chrY_T0001045;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001045;transcript_name=HG002_chrY_T0001045;gene_name=TTTY2;ID=exon:HG002_chrY_T0001045:1;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10060617	10060908	.	+	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757472.1,ENST00000757472.1;transcript_id=HG002_chrY_T0001045;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001045;transcript_name=HG002_chrY_T0001045;gene_name=TTTY2;ID=intron:HG002_chrY_T0001045:1;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10060909	10061057	.	+	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757472.1,ENST00000757472.1;transcript_id=HG002_chrY_T0001045;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001045;transcript_name=HG002_chrY_T0001045;gene_name=TTTY2;ID=exon:HG002_chrY_T0001045:2;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10061058	10061749	.	+	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757472.1,ENST00000757472.1;transcript_id=HG002_chrY_T0001045;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001045;transcript_name=HG002_chrY_T0001045;gene_name=TTTY2;ID=intron:HG002_chrY_T0001045:2;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10061750	10061997	.	+	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757472.1,ENST00000757472.1;transcript_id=HG002_chrY_T0001045;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001045;transcript_name=HG002_chrY_T0001045;gene_name=TTTY2;ID=exon:HG002_chrY_T0001045:3;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10058660	10067221	1000	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=HG002_chrY_T0001046;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_G0000337;transcript_name=HG002_chrY_T0001046;gene_name=TTTY2;ID=HG002_chrY_T0001046;Name=TTTY2
HG002_chrY	CAT	exon	10058660	10058796	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=HG002_chrY_T0001046;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001046;transcript_name=HG002_chrY_T0001046;gene_name=TTTY2;ID=exon:HG002_chrY_T0001046:0;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10058797	10060529	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=HG002_chrY_T0001046;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001046;transcript_name=HG002_chrY_T0001046;gene_name=TTTY2;ID=intron:HG002_chrY_T0001046:0;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10060530	10060616	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=HG002_chrY_T0001046;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001046;transcript_name=HG002_chrY_T0001046;gene_name=TTTY2;ID=exon:HG002_chrY_T0001046:1;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10060617	10060908	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=HG002_chrY_T0001046;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001046;transcript_name=HG002_chrY_T0001046;gene_name=TTTY2;ID=intron:HG002_chrY_T0001046:1;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10060909	10061057	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=HG002_chrY_T0001046;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001046;transcript_name=HG002_chrY_T0001046;gene_name=TTTY2;ID=exon:HG002_chrY_T0001046:2;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10061058	10061749	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=HG002_chrY_T0001046;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001046;transcript_name=HG002_chrY_T0001046;gene_name=TTTY2;ID=intron:HG002_chrY_T0001046:2;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10061750	10061906	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=HG002_chrY_T0001046;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001046;transcript_name=HG002_chrY_T0001046;gene_name=TTTY2;ID=exon:HG002_chrY_T0001046:3;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10061907	10062885	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=HG002_chrY_T0001046;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001046;transcript_name=HG002_chrY_T0001046;gene_name=TTTY2;ID=intron:HG002_chrY_T0001046:3;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10062886	10063103	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=HG002_chrY_T0001046;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001046;transcript_name=HG002_chrY_T0001046;gene_name=TTTY2;ID=exon:HG002_chrY_T0001046:4;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10063104	10064736	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=HG002_chrY_T0001046;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001046;transcript_name=HG002_chrY_T0001046;gene_name=TTTY2;ID=intron:HG002_chrY_T0001046:4;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10064737	10064815	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=HG002_chrY_T0001046;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001046;transcript_name=HG002_chrY_T0001046;gene_name=TTTY2;ID=exon:HG002_chrY_T0001046:5;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10064816	10064935	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=HG002_chrY_T0001046;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001046;transcript_name=HG002_chrY_T0001046;gene_name=TTTY2;ID=intron:HG002_chrY_T0001046:5;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10064936	10065133	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=HG002_chrY_T0001046;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001046;transcript_name=HG002_chrY_T0001046;gene_name=TTTY2;ID=exon:HG002_chrY_T0001046:6;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10065134	10066356	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=HG002_chrY_T0001046;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001046;transcript_name=HG002_chrY_T0001046;gene_name=TTTY2;ID=intron:HG002_chrY_T0001046:6;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10066357	10067221	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=HG002_chrY_T0001046;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001046;transcript_name=HG002_chrY_T0001046;gene_name=TTTY2;ID=exon:HG002_chrY_T0001046:7;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10058663	10066503	1000	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=HG002_chrY_T0001047;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_G0000337;transcript_name=HG002_chrY_T0001047;gene_name=TTTY2;ID=HG002_chrY_T0001047;Name=TTTY2
HG002_chrY	CAT	exon	10058663	10058790	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=HG002_chrY_T0001047;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001047;transcript_name=HG002_chrY_T0001047;gene_name=TTTY2;ID=exon:HG002_chrY_T0001047:0;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10058791	10060529	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=HG002_chrY_T0001047;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001047;transcript_name=HG002_chrY_T0001047;gene_name=TTTY2;ID=intron:HG002_chrY_T0001047:0;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10060530	10060616	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=HG002_chrY_T0001047;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001047;transcript_name=HG002_chrY_T0001047;gene_name=TTTY2;ID=exon:HG002_chrY_T0001047:1;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10060617	10060908	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=HG002_chrY_T0001047;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001047;transcript_name=HG002_chrY_T0001047;gene_name=TTTY2;ID=intron:HG002_chrY_T0001047:1;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10060909	10061057	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=HG002_chrY_T0001047;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001047;transcript_name=HG002_chrY_T0001047;gene_name=TTTY2;ID=exon:HG002_chrY_T0001047:2;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10061058	10061749	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=HG002_chrY_T0001047;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001047;transcript_name=HG002_chrY_T0001047;gene_name=TTTY2;ID=intron:HG002_chrY_T0001047:2;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10061750	10061906	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=HG002_chrY_T0001047;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001047;transcript_name=HG002_chrY_T0001047;gene_name=TTTY2;ID=exon:HG002_chrY_T0001047:3;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10061907	10064736	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=HG002_chrY_T0001047;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001047;transcript_name=HG002_chrY_T0001047;gene_name=TTTY2;ID=intron:HG002_chrY_T0001047:3;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10064737	10064815	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=HG002_chrY_T0001047;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001047;transcript_name=HG002_chrY_T0001047;gene_name=TTTY2;ID=exon:HG002_chrY_T0001047:4;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10064816	10064935	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=HG002_chrY_T0001047;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001047;transcript_name=HG002_chrY_T0001047;gene_name=TTTY2;ID=intron:HG002_chrY_T0001047:4;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10064936	10065133	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=HG002_chrY_T0001047;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001047;transcript_name=HG002_chrY_T0001047;gene_name=TTTY2;ID=exon:HG002_chrY_T0001047:5;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10065134	10066356	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=HG002_chrY_T0001047;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001047;transcript_name=HG002_chrY_T0001047;gene_name=TTTY2;ID=intron:HG002_chrY_T0001047:5;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10066357	10066503	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=HG002_chrY_T0001047;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001047;transcript_name=HG002_chrY_T0001047;gene_name=TTTY2;ID=exon:HG002_chrY_T0001047:6;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10058670	10067032	1000	+	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=HG002_chrY_T0001048;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_G0000337;transcript_name=HG002_chrY_T0001048;gene_name=TTTY2;ID=HG002_chrY_T0001048;Name=TTTY2
HG002_chrY	CAT	exon	10058670	10058796	.	+	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=HG002_chrY_T0001048;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001048;transcript_name=HG002_chrY_T0001048;gene_name=TTTY2;ID=exon:HG002_chrY_T0001048:0;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10058797	10060908	.	+	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=HG002_chrY_T0001048;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001048;transcript_name=HG002_chrY_T0001048;gene_name=TTTY2;ID=intron:HG002_chrY_T0001048:0;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10060909	10061057	.	+	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=HG002_chrY_T0001048;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001048;transcript_name=HG002_chrY_T0001048;gene_name=TTTY2;ID=exon:HG002_chrY_T0001048:1;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10061058	10061749	.	+	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=HG002_chrY_T0001048;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001048;transcript_name=HG002_chrY_T0001048;gene_name=TTTY2;ID=intron:HG002_chrY_T0001048:1;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10061750	10061906	.	+	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=HG002_chrY_T0001048;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001048;transcript_name=HG002_chrY_T0001048;gene_name=TTTY2;ID=exon:HG002_chrY_T0001048:2;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10061907	10064935	.	+	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=HG002_chrY_T0001048;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001048;transcript_name=HG002_chrY_T0001048;gene_name=TTTY2;ID=intron:HG002_chrY_T0001048:2;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10064936	10065133	.	+	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=HG002_chrY_T0001048;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001048;transcript_name=HG002_chrY_T0001048;gene_name=TTTY2;ID=exon:HG002_chrY_T0001048:3;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10065134	10066356	.	+	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=HG002_chrY_T0001048;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001048;transcript_name=HG002_chrY_T0001048;gene_name=TTTY2;ID=intron:HG002_chrY_T0001048:3;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10066357	10067032	.	+	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=HG002_chrY_T0001048;gene_id=HG002_chrY_G0000337;Parent=HG002_chrY_T0001048;transcript_name=HG002_chrY_T0001048;gene_name=TTTY2;ID=exon:HG002_chrY_T0001048:4;Name=TTTY2;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	10061716	10082892	.	-	.	source_gene_common_name=TTTY1B;source_gene=ENSG00000129816.6;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;gene_id=HG002_chrY_G0000338;gene_biotype=lncRNA;gene_name=TTTY1B;gene_sources=liftoff;ID=HG002_chrY_G0000338;Name=TTTY1B
HG002_chrY	CAT	transcript	10061716	10082851	1000	-	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=HG002_chrY_T0001049;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_G0000338;transcript_name=HG002_chrY_T0001049;gene_name=TTTY1B;ID=HG002_chrY_T0001049;Name=TTTY1B
HG002_chrY	CAT	exon	10061716	10061973	.	-	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=HG002_chrY_T0001049;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001049;transcript_name=HG002_chrY_T0001049;gene_name=TTTY1B;ID=exon:HG002_chrY_T0001049:0;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10061974	10069554	.	-	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=HG002_chrY_T0001049;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001049;transcript_name=HG002_chrY_T0001049;gene_name=TTTY1B;ID=intron:HG002_chrY_T0001049:0;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10069555	10069692	.	-	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=HG002_chrY_T0001049;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001049;transcript_name=HG002_chrY_T0001049;gene_name=TTTY1B;ID=exon:HG002_chrY_T0001049:1;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10069693	10072048	.	-	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=HG002_chrY_T0001049;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001049;transcript_name=HG002_chrY_T0001049;gene_name=TTTY1B;ID=intron:HG002_chrY_T0001049:1;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10072049	10072157	.	-	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=HG002_chrY_T0001049;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001049;transcript_name=HG002_chrY_T0001049;gene_name=TTTY1B;ID=exon:HG002_chrY_T0001049:2;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10072158	10079022	.	-	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=HG002_chrY_T0001049;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001049;transcript_name=HG002_chrY_T0001049;gene_name=TTTY1B;ID=intron:HG002_chrY_T0001049:2;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10079023	10079182	.	-	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=HG002_chrY_T0001049;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001049;transcript_name=HG002_chrY_T0001049;gene_name=TTTY1B;ID=exon:HG002_chrY_T0001049:3;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10079183	10082606	.	-	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=HG002_chrY_T0001049;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001049;transcript_name=HG002_chrY_T0001049;gene_name=TTTY1B;ID=intron:HG002_chrY_T0001049:3;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10082607	10082851	.	-	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=HG002_chrY_T0001049;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001049;transcript_name=HG002_chrY_T0001049;gene_name=TTTY1B;ID=exon:HG002_chrY_T0001049:4;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10061716	10082864	1000	-	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG002_chrY_T0001050;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_G0000338;transcript_name=HG002_chrY_T0001050;gene_name=TTTY1B;ID=HG002_chrY_T0001050;Name=TTTY1B
HG002_chrY	CAT	exon	10061716	10061973	.	-	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG002_chrY_T0001050;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001050;transcript_name=HG002_chrY_T0001050;gene_name=TTTY1B;ID=exon:HG002_chrY_T0001050:0;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10061974	10064303	.	-	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG002_chrY_T0001050;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001050;transcript_name=HG002_chrY_T0001050;gene_name=TTTY1B;ID=intron:HG002_chrY_T0001050:0;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10064304	10064447	.	-	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG002_chrY_T0001050;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001050;transcript_name=HG002_chrY_T0001050;gene_name=TTTY1B;ID=exon:HG002_chrY_T0001050:1;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10064448	10069554	.	-	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG002_chrY_T0001050;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001050;transcript_name=HG002_chrY_T0001050;gene_name=TTTY1B;ID=intron:HG002_chrY_T0001050:1;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10069555	10069692	.	-	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG002_chrY_T0001050;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001050;transcript_name=HG002_chrY_T0001050;gene_name=TTTY1B;ID=exon:HG002_chrY_T0001050:2;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10069693	10070340	.	-	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG002_chrY_T0001050;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001050;transcript_name=HG002_chrY_T0001050;gene_name=TTTY1B;ID=intron:HG002_chrY_T0001050:2;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10070341	10070427	.	-	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG002_chrY_T0001050;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001050;transcript_name=HG002_chrY_T0001050;gene_name=TTTY1B;ID=exon:HG002_chrY_T0001050:3;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10070428	10071998	.	-	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG002_chrY_T0001050;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001050;transcript_name=HG002_chrY_T0001050;gene_name=TTTY1B;ID=intron:HG002_chrY_T0001050:3;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10071999	10072157	.	-	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG002_chrY_T0001050;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001050;transcript_name=HG002_chrY_T0001050;gene_name=TTTY1B;ID=exon:HG002_chrY_T0001050:4;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10072158	10082606	.	-	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG002_chrY_T0001050;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001050;transcript_name=HG002_chrY_T0001050;gene_name=TTTY1B;ID=intron:HG002_chrY_T0001050:4;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10082607	10082864	.	-	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG002_chrY_T0001050;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001050;transcript_name=HG002_chrY_T0001050;gene_name=TTTY1B;ID=exon:HG002_chrY_T0001050:5;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10067709	10082864	1000	-	.	source_transcript=ENST00000735680.1;source_transcript_name=TTTY1B-204;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735680.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG002_chrY_T0001051;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_G0000338;transcript_name=HG002_chrY_T0001051;gene_name=TTTY1B;ID=HG002_chrY_T0001051;Name=TTTY1B
HG002_chrY	CAT	exon	10067709	10067873	.	-	.	source_transcript=ENST00000735680.1;source_transcript_name=TTTY1B-204;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG002_chrY_T0001051;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001051;transcript_name=HG002_chrY_T0001051;gene_name=TTTY1B;ID=exon:HG002_chrY_T0001051:0;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10067874	10071998	.	-	.	source_transcript=ENST00000735680.1;source_transcript_name=TTTY1B-204;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG002_chrY_T0001051;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001051;transcript_name=HG002_chrY_T0001051;gene_name=TTTY1B;ID=intron:HG002_chrY_T0001051:0;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10071999	10072157	.	-	.	source_transcript=ENST00000735680.1;source_transcript_name=TTTY1B-204;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG002_chrY_T0001051;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001051;transcript_name=HG002_chrY_T0001051;gene_name=TTTY1B;ID=exon:HG002_chrY_T0001051:1;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10072158	10082606	.	-	.	source_transcript=ENST00000735680.1;source_transcript_name=TTTY1B-204;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG002_chrY_T0001051;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001051;transcript_name=HG002_chrY_T0001051;gene_name=TTTY1B;ID=intron:HG002_chrY_T0001051:1;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10082607	10082864	.	-	.	source_transcript=ENST00000735680.1;source_transcript_name=TTTY1B-204;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG002_chrY_T0001051;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001051;transcript_name=HG002_chrY_T0001051;gene_name=TTTY1B;ID=exon:HG002_chrY_T0001051:2;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10067716	10082892	1000	-	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG002_chrY_T0001052;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_G0000338;transcript_name=HG002_chrY_T0001052;gene_name=TTTY1B;ID=HG002_chrY_T0001052;Name=TTTY1B
HG002_chrY	CAT	exon	10067716	10067873	.	-	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG002_chrY_T0001052;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001052;transcript_name=HG002_chrY_T0001052;gene_name=TTTY1B;ID=exon:HG002_chrY_T0001052:0;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10067874	10071998	.	-	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG002_chrY_T0001052;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001052;transcript_name=HG002_chrY_T0001052;gene_name=TTTY1B;ID=intron:HG002_chrY_T0001052:0;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10071999	10072157	.	-	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG002_chrY_T0001052;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001052;transcript_name=HG002_chrY_T0001052;gene_name=TTTY1B;ID=exon:HG002_chrY_T0001052:1;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10072158	10079022	.	-	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG002_chrY_T0001052;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001052;transcript_name=HG002_chrY_T0001052;gene_name=TTTY1B;ID=intron:HG002_chrY_T0001052:1;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10079023	10079182	.	-	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG002_chrY_T0001052;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001052;transcript_name=HG002_chrY_T0001052;gene_name=TTTY1B;ID=exon:HG002_chrY_T0001052:2;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10079183	10082606	.	-	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG002_chrY_T0001052;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001052;transcript_name=HG002_chrY_T0001052;gene_name=TTTY1B;ID=intron:HG002_chrY_T0001052:2;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10082607	10082892	.	-	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG002_chrY_T0001052;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001052;transcript_name=HG002_chrY_T0001052;gene_name=TTTY1B;ID=exon:HG002_chrY_T0001052:3;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10076573	10082846	1000	-	.	source_transcript=ENST00000735682.1;source_transcript_name=TTTY1B-205;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735682.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG002_chrY_T0001053;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_G0000338;transcript_name=HG002_chrY_T0001053;gene_name=TTTY1B;ID=HG002_chrY_T0001053;Name=TTTY1B
HG002_chrY	CAT	exon	10076573	10076820	.	-	.	source_transcript=ENST00000735682.1;source_transcript_name=TTTY1B-205;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG002_chrY_T0001053;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001053;transcript_name=HG002_chrY_T0001053;gene_name=TTTY1B;ID=exon:HG002_chrY_T0001053:0;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10076821	10082606	.	-	.	source_transcript=ENST00000735682.1;source_transcript_name=TTTY1B-205;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG002_chrY_T0001053;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001053;transcript_name=HG002_chrY_T0001053;gene_name=TTTY1B;ID=intron:HG002_chrY_T0001053:0;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10082607	10082846	.	-	.	source_transcript=ENST00000735682.1;source_transcript_name=TTTY1B-205;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG002_chrY_T0001053;gene_id=HG002_chrY_G0000338;Parent=HG002_chrY_T0001053;transcript_name=HG002_chrY_T0001053;gene_name=TTTY1B;ID=exon:HG002_chrY_T0001053:1;Name=TTTY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	10092149	10098638	.	+	.	source_gene_common_name=ENSG00000303345;source_gene=ENSG00000303345.1;gene_id=HG002_chrY_G0000339;gene_biotype=lncRNA;gene_name=ENSG00000303345;gene_sources=liftoff;ID=HG002_chrY_G0000339;Name=ENSG00000303345
HG002_chrY	CAT	transcript	10092149	10098638	1000	+	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=299.854;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;transcript_id=HG002_chrY_T0001054;gene_id=HG002_chrY_G0000339;Parent=HG002_chrY_G0000339;transcript_name=HG002_chrY_T0001054;gene_name=ENSG00000303345;ID=HG002_chrY_T0001054;Name=ENSG00000303345
HG002_chrY	CAT	exon	10092149	10092204	.	+	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=299.854;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;transcript_id=HG002_chrY_T0001054;gene_id=HG002_chrY_G0000339;Parent=HG002_chrY_T0001054;transcript_name=HG002_chrY_T0001054;gene_name=ENSG00000303345;ID=exon:HG002_chrY_T0001054:0;Name=ENSG00000303345;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10092205	10092407	.	+	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=299.854;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;transcript_id=HG002_chrY_T0001054;gene_id=HG002_chrY_G0000339;Parent=HG002_chrY_T0001054;transcript_name=HG002_chrY_T0001054;gene_name=ENSG00000303345;ID=intron:HG002_chrY_T0001054:0;Name=ENSG00000303345;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10092408	10092494	.	+	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=299.854;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;transcript_id=HG002_chrY_T0001054;gene_id=HG002_chrY_G0000339;Parent=HG002_chrY_T0001054;transcript_name=HG002_chrY_T0001054;gene_name=ENSG00000303345;ID=exon:HG002_chrY_T0001054:1;Name=ENSG00000303345;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10092495	10095857	.	+	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=299.854;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;transcript_id=HG002_chrY_T0001054;gene_id=HG002_chrY_G0000339;Parent=HG002_chrY_T0001054;transcript_name=HG002_chrY_T0001054;gene_name=ENSG00000303345;ID=intron:HG002_chrY_T0001054:1;Name=ENSG00000303345;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10095858	10096013	.	+	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=299.854;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;transcript_id=HG002_chrY_T0001054;gene_id=HG002_chrY_G0000339;Parent=HG002_chrY_T0001054;transcript_name=HG002_chrY_T0001054;gene_name=ENSG00000303345;ID=exon:HG002_chrY_T0001054:2;Name=ENSG00000303345;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10096014	10098254	.	+	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=299.854;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;transcript_id=HG002_chrY_T0001054;gene_id=HG002_chrY_G0000339;Parent=HG002_chrY_T0001054;transcript_name=HG002_chrY_T0001054;gene_name=ENSG00000303345;ID=intron:HG002_chrY_T0001054:2;Name=ENSG00000303345;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10098255	10098638	.	+	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=299.854;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;transcript_id=HG002_chrY_T0001054;gene_id=HG002_chrY_G0000339;Parent=HG002_chrY_T0001054;transcript_name=HG002_chrY_T0001054;gene_name=ENSG00000303345;ID=exon:HG002_chrY_T0001054:3;Name=ENSG00000303345;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	10103362	10116073	.	+	.	source_gene_common_name=LINC00280;source_gene=ENSG00000229643.2;gene_id=HG002_chrY_G0000340;gene_biotype=lncRNA;gene_name=LINC00280;gene_sources=liftoff;ID=HG002_chrY_G0000340;Name=LINC00280
HG002_chrY	CAT	transcript	10103362	10112722	1000	+	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=274.91499999999996;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;transcript_id=HG002_chrY_T0001055;gene_id=HG002_chrY_G0000340;Parent=HG002_chrY_G0000340;transcript_name=HG002_chrY_T0001055;gene_name=LINC00280;ID=HG002_chrY_T0001055;Name=LINC00280
HG002_chrY	CAT	exon	10103362	10103530	.	+	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=274.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;transcript_id=HG002_chrY_T0001055;gene_id=HG002_chrY_G0000340;Parent=HG002_chrY_T0001055;transcript_name=HG002_chrY_T0001055;gene_name=LINC00280;ID=exon:HG002_chrY_T0001055:0;Name=LINC00280;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10103531	10103906	.	+	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=274.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;transcript_id=HG002_chrY_T0001055;gene_id=HG002_chrY_G0000340;Parent=HG002_chrY_T0001055;transcript_name=HG002_chrY_T0001055;gene_name=LINC00280;ID=intron:HG002_chrY_T0001055:0;Name=LINC00280;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10103907	10103979	.	+	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=274.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;transcript_id=HG002_chrY_T0001055;gene_id=HG002_chrY_G0000340;Parent=HG002_chrY_T0001055;transcript_name=HG002_chrY_T0001055;gene_name=LINC00280;ID=exon:HG002_chrY_T0001055:1;Name=LINC00280;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10103980	10106520	.	+	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=274.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;transcript_id=HG002_chrY_T0001055;gene_id=HG002_chrY_G0000340;Parent=HG002_chrY_T0001055;transcript_name=HG002_chrY_T0001055;gene_name=LINC00280;ID=intron:HG002_chrY_T0001055:1;Name=LINC00280;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10106521	10106773	.	+	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=274.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;transcript_id=HG002_chrY_T0001055;gene_id=HG002_chrY_G0000340;Parent=HG002_chrY_T0001055;transcript_name=HG002_chrY_T0001055;gene_name=LINC00280;ID=exon:HG002_chrY_T0001055:2;Name=LINC00280;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10106774	10110862	.	+	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=274.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;transcript_id=HG002_chrY_T0001055;gene_id=HG002_chrY_G0000340;Parent=HG002_chrY_T0001055;transcript_name=HG002_chrY_T0001055;gene_name=LINC00280;ID=intron:HG002_chrY_T0001055:2;Name=LINC00280;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10110863	10112722	.	+	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=274.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;transcript_id=HG002_chrY_T0001055;gene_id=HG002_chrY_G0000340;Parent=HG002_chrY_T0001055;transcript_name=HG002_chrY_T0001055;gene_name=LINC00280;ID=exon:HG002_chrY_T0001055:3;Name=LINC00280;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10111871	10116073	1000	+	.	source_transcript=ENST00000439525.1;source_transcript_name=LINC00280-201;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439525.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439525.1;transcript_score=299.33;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;transcript_id=HG002_chrY_T0001056;gene_id=HG002_chrY_G0000340;Parent=HG002_chrY_G0000340;transcript_name=HG002_chrY_T0001056;gene_name=LINC00280;ID=HG002_chrY_T0001056;Name=LINC00280
HG002_chrY	CAT	exon	10111871	10111956	.	+	.	source_transcript=ENST00000439525.1;source_transcript_name=LINC00280-201;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439525.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439525.1;transcript_score=299.33;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;transcript_id=HG002_chrY_T0001056;gene_id=HG002_chrY_G0000340;Parent=HG002_chrY_T0001056;transcript_name=HG002_chrY_T0001056;gene_name=LINC00280;ID=exon:HG002_chrY_T0001056:0;Name=LINC00280;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10111957	10114457	.	+	.	source_transcript=ENST00000439525.1;source_transcript_name=LINC00280-201;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439525.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439525.1;transcript_score=299.33;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;transcript_id=HG002_chrY_T0001056;gene_id=HG002_chrY_G0000340;Parent=HG002_chrY_T0001056;transcript_name=HG002_chrY_T0001056;gene_name=LINC00280;ID=intron:HG002_chrY_T0001056:0;Name=LINC00280;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10114458	10114600	.	+	.	source_transcript=ENST00000439525.1;source_transcript_name=LINC00280-201;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439525.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439525.1;transcript_score=299.33;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;transcript_id=HG002_chrY_T0001056;gene_id=HG002_chrY_G0000340;Parent=HG002_chrY_T0001056;transcript_name=HG002_chrY_T0001056;gene_name=LINC00280;ID=exon:HG002_chrY_T0001056:1;Name=LINC00280;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10114601	10115854	.	+	.	source_transcript=ENST00000439525.1;source_transcript_name=LINC00280-201;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439525.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439525.1;transcript_score=299.33;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;transcript_id=HG002_chrY_T0001056;gene_id=HG002_chrY_G0000340;Parent=HG002_chrY_T0001056;transcript_name=HG002_chrY_T0001056;gene_name=LINC00280;ID=intron:HG002_chrY_T0001056:1;Name=LINC00280;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10115855	10116073	.	+	.	source_transcript=ENST00000439525.1;source_transcript_name=LINC00280-201;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439525.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439525.1;transcript_score=299.33;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;transcript_id=HG002_chrY_T0001056;gene_id=HG002_chrY_G0000340;Parent=HG002_chrY_T0001056;transcript_name=HG002_chrY_T0001056;gene_name=LINC00280;ID=exon:HG002_chrY_T0001056:2;Name=LINC00280;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	10129969	10145267	.	-	.	source_gene_common_name=RBMY2GP;source_gene=ENSG00000223744.1;gene_id=HG002_chrY_G0000341;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2GP;gene_sources=liftoff;ID=HG002_chrY_G0000341;Name=RBMY2GP
HG002_chrY	CAT	transcript	10129969	10145267	1000	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG002_chrY_T0001057;gene_id=HG002_chrY_G0000341;Parent=HG002_chrY_G0000341;transcript_name=HG002_chrY_T0001057;gene_name=RBMY2GP;ID=HG002_chrY_T0001057;Name=RBMY2GP
HG002_chrY	CAT	exon	10129969	10130270	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG002_chrY_T0001057;gene_id=HG002_chrY_G0000341;Parent=HG002_chrY_T0001057;transcript_name=HG002_chrY_T0001057;gene_name=RBMY2GP;ID=exon:HG002_chrY_T0001057:0;Name=RBMY2GP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10130271	10130679	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG002_chrY_T0001057;gene_id=HG002_chrY_G0000341;Parent=HG002_chrY_T0001057;transcript_name=HG002_chrY_T0001057;gene_name=RBMY2GP;ID=intron:HG002_chrY_T0001057:0;Name=RBMY2GP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10130680	10130761	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG002_chrY_T0001057;gene_id=HG002_chrY_G0000341;Parent=HG002_chrY_T0001057;transcript_name=HG002_chrY_T0001057;gene_name=RBMY2GP;ID=exon:HG002_chrY_T0001057:1;Name=RBMY2GP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10130762	10130871	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG002_chrY_T0001057;gene_id=HG002_chrY_G0000341;Parent=HG002_chrY_T0001057;transcript_name=HG002_chrY_T0001057;gene_name=RBMY2GP;ID=intron:HG002_chrY_T0001057:1;Name=RBMY2GP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10130872	10130982	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG002_chrY_T0001057;gene_id=HG002_chrY_G0000341;Parent=HG002_chrY_T0001057;transcript_name=HG002_chrY_T0001057;gene_name=RBMY2GP;ID=exon:HG002_chrY_T0001057:2;Name=RBMY2GP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10130983	10131379	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG002_chrY_T0001057;gene_id=HG002_chrY_G0000341;Parent=HG002_chrY_T0001057;transcript_name=HG002_chrY_T0001057;gene_name=RBMY2GP;ID=intron:HG002_chrY_T0001057:2;Name=RBMY2GP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10131380	10131490	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG002_chrY_T0001057;gene_id=HG002_chrY_G0000341;Parent=HG002_chrY_T0001057;transcript_name=HG002_chrY_T0001057;gene_name=RBMY2GP;ID=exon:HG002_chrY_T0001057:3;Name=RBMY2GP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10131491	10132297	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG002_chrY_T0001057;gene_id=HG002_chrY_G0000341;Parent=HG002_chrY_T0001057;transcript_name=HG002_chrY_T0001057;gene_name=RBMY2GP;ID=intron:HG002_chrY_T0001057:3;Name=RBMY2GP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10132298	10132397	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG002_chrY_T0001057;gene_id=HG002_chrY_G0000341;Parent=HG002_chrY_T0001057;transcript_name=HG002_chrY_T0001057;gene_name=RBMY2GP;ID=exon:HG002_chrY_T0001057:4;Name=RBMY2GP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10132398	10134397	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG002_chrY_T0001057;gene_id=HG002_chrY_G0000341;Parent=HG002_chrY_T0001057;transcript_name=HG002_chrY_T0001057;gene_name=RBMY2GP;ID=intron:HG002_chrY_T0001057:4;Name=RBMY2GP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10134398	10134547	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG002_chrY_T0001057;gene_id=HG002_chrY_G0000341;Parent=HG002_chrY_T0001057;transcript_name=HG002_chrY_T0001057;gene_name=RBMY2GP;ID=exon:HG002_chrY_T0001057:5;Name=RBMY2GP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10134548	10145089	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG002_chrY_T0001057;gene_id=HG002_chrY_G0000341;Parent=HG002_chrY_T0001057;transcript_name=HG002_chrY_T0001057;gene_name=RBMY2GP;ID=intron:HG002_chrY_T0001057:5;Name=RBMY2GP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10145090	10145267	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG002_chrY_T0001057;gene_id=HG002_chrY_G0000341;Parent=HG002_chrY_T0001057;transcript_name=HG002_chrY_T0001057;gene_name=RBMY2GP;ID=exon:HG002_chrY_T0001057:6;Name=RBMY2GP;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	10130692	10157122	.	-	.	source_gene_common_name=ENSG00000295986;source_gene=ENSG00000295986.1;gene_id=HG002_chrY_G0000342;gene_biotype=lncRNA;gene_name=ENSG00000295986;gene_sources=liftoff;ID=HG002_chrY_G0000342;Name=ENSG00000295986
HG002_chrY	CAT	transcript	10130692	10157122	1000	-	.	source_transcript=ENST00000734848.1;source_transcript_name=ENST00000734848;source_gene=ENSG00000295986.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295986.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000734848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000734848.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295986;transcript_id=HG002_chrY_T0001058;gene_id=HG002_chrY_G0000342;Parent=HG002_chrY_G0000342;transcript_name=HG002_chrY_T0001058;gene_name=ENSG00000295986;ID=HG002_chrY_T0001058;Name=ENSG00000295986
HG002_chrY	CAT	exon	10130692	10130761	.	-	.	source_transcript=ENST00000734848.1;source_transcript_name=ENST00000734848;source_gene=ENSG00000295986.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295986.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000734848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000734848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295986;transcript_id=HG002_chrY_T0001058;gene_id=HG002_chrY_G0000342;Parent=HG002_chrY_T0001058;transcript_name=HG002_chrY_T0001058;gene_name=ENSG00000295986;ID=exon:HG002_chrY_T0001058:0;Name=ENSG00000295986;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10130762	10134397	.	-	.	source_transcript=ENST00000734848.1;source_transcript_name=ENST00000734848;source_gene=ENSG00000295986.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295986.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000734848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000734848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295986;transcript_id=HG002_chrY_T0001058;gene_id=HG002_chrY_G0000342;Parent=HG002_chrY_T0001058;transcript_name=HG002_chrY_T0001058;gene_name=ENSG00000295986;ID=intron:HG002_chrY_T0001058:0;Name=ENSG00000295986;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10134398	10134513	.	-	.	source_transcript=ENST00000734848.1;source_transcript_name=ENST00000734848;source_gene=ENSG00000295986.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295986.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000734848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000734848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295986;transcript_id=HG002_chrY_T0001058;gene_id=HG002_chrY_G0000342;Parent=HG002_chrY_T0001058;transcript_name=HG002_chrY_T0001058;gene_name=ENSG00000295986;ID=exon:HG002_chrY_T0001058:1;Name=ENSG00000295986;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10134514	10156638	.	-	.	source_transcript=ENST00000734848.1;source_transcript_name=ENST00000734848;source_gene=ENSG00000295986.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295986.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000734848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000734848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295986;transcript_id=HG002_chrY_T0001058;gene_id=HG002_chrY_G0000342;Parent=HG002_chrY_T0001058;transcript_name=HG002_chrY_T0001058;gene_name=ENSG00000295986;ID=intron:HG002_chrY_T0001058:1;Name=ENSG00000295986;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10156639	10157122	.	-	.	source_transcript=ENST00000734848.1;source_transcript_name=ENST00000734848;source_gene=ENSG00000295986.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295986.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000734848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000734848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295986;transcript_id=HG002_chrY_T0001058;gene_id=HG002_chrY_G0000342;Parent=HG002_chrY_T0001058;transcript_name=HG002_chrY_T0001058;gene_name=ENSG00000295986;ID=exon:HG002_chrY_T0001058:2;Name=ENSG00000295986;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	10165118	10167278	.	-	.	source_gene_common_name=ENSG00000235094;source_gene=ENSG00000235094.3;gene_id=HG002_chrY_G0000343;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000235094;gene_sources=liftoff;ID=HG002_chrY_G0000343;Name=ENSG00000235094
HG002_chrY	CAT	transcript	10165118	10167278	1000	-	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;transcript_id=HG002_chrY_T0001059;gene_id=HG002_chrY_G0000343;Parent=HG002_chrY_G0000343;transcript_name=HG002_chrY_T0001059;gene_name=ENSG00000235094;ID=HG002_chrY_T0001059;Name=ENSG00000235094
HG002_chrY	CAT	exon	10165118	10165163	.	-	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;transcript_id=HG002_chrY_T0001059;gene_id=HG002_chrY_G0000343;Parent=HG002_chrY_T0001059;transcript_name=HG002_chrY_T0001059;gene_name=ENSG00000235094;ID=exon:HG002_chrY_T0001059:0;Name=ENSG00000235094;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10165164	10165399	.	-	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;transcript_id=HG002_chrY_T0001059;gene_id=HG002_chrY_G0000343;Parent=HG002_chrY_T0001059;transcript_name=HG002_chrY_T0001059;gene_name=ENSG00000235094;ID=intron:HG002_chrY_T0001059:0;Name=ENSG00000235094;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10165400	10165422	.	-	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;transcript_id=HG002_chrY_T0001059;gene_id=HG002_chrY_G0000343;Parent=HG002_chrY_T0001059;transcript_name=HG002_chrY_T0001059;gene_name=ENSG00000235094;ID=exon:HG002_chrY_T0001059:1;Name=ENSG00000235094;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10165423	10165508	.	-	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;transcript_id=HG002_chrY_T0001059;gene_id=HG002_chrY_G0000343;Parent=HG002_chrY_T0001059;transcript_name=HG002_chrY_T0001059;gene_name=ENSG00000235094;ID=intron:HG002_chrY_T0001059:1;Name=ENSG00000235094;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10165509	10165624	.	-	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;transcript_id=HG002_chrY_T0001059;gene_id=HG002_chrY_G0000343;Parent=HG002_chrY_T0001059;transcript_name=HG002_chrY_T0001059;gene_name=ENSG00000235094;ID=exon:HG002_chrY_T0001059:2;Name=ENSG00000235094;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10165625	10165819	.	-	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;transcript_id=HG002_chrY_T0001059;gene_id=HG002_chrY_G0000343;Parent=HG002_chrY_T0001059;transcript_name=HG002_chrY_T0001059;gene_name=ENSG00000235094;ID=intron:HG002_chrY_T0001059:2;Name=ENSG00000235094;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10165820	10165897	.	-	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;transcript_id=HG002_chrY_T0001059;gene_id=HG002_chrY_G0000343;Parent=HG002_chrY_T0001059;transcript_name=HG002_chrY_T0001059;gene_name=ENSG00000235094;ID=exon:HG002_chrY_T0001059:3;Name=ENSG00000235094;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10165898	10166948	.	-	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;transcript_id=HG002_chrY_T0001059;gene_id=HG002_chrY_G0000343;Parent=HG002_chrY_T0001059;transcript_name=HG002_chrY_T0001059;gene_name=ENSG00000235094;ID=intron:HG002_chrY_T0001059:3;Name=ENSG00000235094;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10166949	10167278	.	-	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;transcript_id=HG002_chrY_T0001059;gene_id=HG002_chrY_G0000343;Parent=HG002_chrY_T0001059;transcript_name=HG002_chrY_T0001059;gene_name=ENSG00000235094;ID=exon:HG002_chrY_T0001059:4;Name=ENSG00000235094;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	10168246	10169363	.	+	.	source_gene_common_name=TSPY19P;source_gene=ENSG00000234583.1;alternative_source_transcripts=ENST00000441642.1,ENST00000441642.1;gene_id=HG002_chrY_G0000344;gene_biotype=unprocessed_pseudogene;gene_name=TSPY19P;gene_sources=liftoff;ID=HG002_chrY_G0000344;Name=TSPY19P
HG002_chrY	CAT	transcript	10168246	10169363	1000	+	.	source_transcript=ENST00000418461.1;source_transcript_name=TSPY19P-201;source_gene=ENSG00000234583.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234583.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418461.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY19P;alternative_source_transcripts=ENST00000441642.1,ENST00000441642.1;transcript_id=HG002_chrY_T0001060;gene_id=HG002_chrY_G0000344;Parent=HG002_chrY_G0000344;transcript_name=HG002_chrY_T0001060;gene_name=TSPY19P;ID=HG002_chrY_T0001060;Name=TSPY19P
HG002_chrY	CAT	exon	10168246	10168721	.	+	.	source_transcript=ENST00000418461.1;source_transcript_name=TSPY19P-201;source_gene=ENSG00000234583.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234583.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY19P;alternative_source_transcripts=ENST00000441642.1,ENST00000441642.1;transcript_id=HG002_chrY_T0001060;gene_id=HG002_chrY_G0000344;Parent=HG002_chrY_T0001060;transcript_name=HG002_chrY_T0001060;gene_name=TSPY19P;ID=exon:HG002_chrY_T0001060:0;Name=TSPY19P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10168722	10169330	.	+	.	source_transcript=ENST00000418461.1;source_transcript_name=TSPY19P-201;source_gene=ENSG00000234583.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234583.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY19P;alternative_source_transcripts=ENST00000441642.1,ENST00000441642.1;transcript_id=HG002_chrY_T0001060;gene_id=HG002_chrY_G0000344;Parent=HG002_chrY_T0001060;transcript_name=HG002_chrY_T0001060;gene_name=TSPY19P;ID=intron:HG002_chrY_T0001060:0;Name=TSPY19P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10169331	10169363	.	+	.	source_transcript=ENST00000418461.1;source_transcript_name=TSPY19P-201;source_gene=ENSG00000234583.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234583.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY19P;alternative_source_transcripts=ENST00000441642.1,ENST00000441642.1;transcript_id=HG002_chrY_T0001060;gene_id=HG002_chrY_G0000344;Parent=HG002_chrY_T0001060;transcript_name=HG002_chrY_T0001060;gene_name=TSPY19P;ID=exon:HG002_chrY_T0001060:1;Name=TSPY19P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	10198106	10206706	.	-	.	source_gene_common_name=ENSG00000296934;source_gene=ENSG00000296934.1;gene_id=HG002_chrY_G0000345;gene_biotype=lncRNA;gene_name=ENSG00000296934;gene_sources=liftoff;ID=HG002_chrY_G0000345;Name=ENSG00000296934
HG002_chrY	CAT	transcript	10198106	10206694	1000	-	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001061;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_G0000345;transcript_name=HG002_chrY_T0001061;gene_name=ENSG00000296934;ID=HG002_chrY_T0001061;Name=ENSG00000296934
HG002_chrY	CAT	exon	10198106	10198719	.	-	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001061;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001061;transcript_name=HG002_chrY_T0001061;gene_name=ENSG00000296934;ID=exon:HG002_chrY_T0001061:0;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10198720	10205326	.	-	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001061;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001061;transcript_name=HG002_chrY_T0001061;gene_name=ENSG00000296934;ID=intron:HG002_chrY_T0001061:0;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10205327	10205437	.	-	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001061;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001061;transcript_name=HG002_chrY_T0001061;gene_name=ENSG00000296934;ID=exon:HG002_chrY_T0001061:1;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10205438	10205565	.	-	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001061;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001061;transcript_name=HG002_chrY_T0001061;gene_name=ENSG00000296934;ID=intron:HG002_chrY_T0001061:1;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10205566	10205643	.	-	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001061;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001061;transcript_name=HG002_chrY_T0001061;gene_name=ENSG00000296934;ID=exon:HG002_chrY_T0001061:2;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10205644	10206249	.	-	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001061;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001061;transcript_name=HG002_chrY_T0001061;gene_name=ENSG00000296934;ID=intron:HG002_chrY_T0001061:2;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10206250	10206694	.	-	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001061;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001061;transcript_name=HG002_chrY_T0001061;gene_name=ENSG00000296934;ID=exon:HG002_chrY_T0001061:3;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10202217	10206706	1000	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001063;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_G0000345;transcript_name=HG002_chrY_T0001063;gene_name=ENSG00000296934;ID=HG002_chrY_T0001063;Name=ENSG00000296934
HG002_chrY	CAT	exon	10202217	10202785	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001063;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001063;transcript_name=HG002_chrY_T0001063;gene_name=ENSG00000296934;ID=exon:HG002_chrY_T0001063:0;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10202786	10204187	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001063;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001063;transcript_name=HG002_chrY_T0001063;gene_name=ENSG00000296934;ID=intron:HG002_chrY_T0001063:0;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10204188	10204201	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001063;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001063;transcript_name=HG002_chrY_T0001063;gene_name=ENSG00000296934;ID=exon:HG002_chrY_T0001063:1;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10204202	10204854	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001063;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001063;transcript_name=HG002_chrY_T0001063;gene_name=ENSG00000296934;ID=intron:HG002_chrY_T0001063:1;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10204855	10204977	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001063;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001063;transcript_name=HG002_chrY_T0001063;gene_name=ENSG00000296934;ID=exon:HG002_chrY_T0001063:2;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10204978	10205326	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001063;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001063;transcript_name=HG002_chrY_T0001063;gene_name=ENSG00000296934;ID=intron:HG002_chrY_T0001063:2;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10205327	10205437	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001063;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001063;transcript_name=HG002_chrY_T0001063;gene_name=ENSG00000296934;ID=exon:HG002_chrY_T0001063:3;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10205438	10205565	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001063;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001063;transcript_name=HG002_chrY_T0001063;gene_name=ENSG00000296934;ID=intron:HG002_chrY_T0001063:3;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10205566	10205686	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001063;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001063;transcript_name=HG002_chrY_T0001063;gene_name=ENSG00000296934;ID=exon:HG002_chrY_T0001063:4;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10205687	10206141	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001063;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001063;transcript_name=HG002_chrY_T0001063;gene_name=ENSG00000296934;ID=intron:HG002_chrY_T0001063:4;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10206142	10206216	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001063;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001063;transcript_name=HG002_chrY_T0001063;gene_name=ENSG00000296934;ID=exon:HG002_chrY_T0001063:5;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10206217	10206639	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001063;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001063;transcript_name=HG002_chrY_T0001063;gene_name=ENSG00000296934;ID=intron:HG002_chrY_T0001063:5;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10206640	10206706	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001063;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001063;transcript_name=HG002_chrY_T0001063;gene_name=ENSG00000296934;ID=exon:HG002_chrY_T0001063:6;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10202385	10206717	1000	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001064;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_G0000345;transcript_name=HG002_chrY_T0001064;gene_name=ENSG00000296934;ID=HG002_chrY_T0001064;Name=ENSG00000296934
HG002_chrY	CAT	exon	10202385	10202766	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001064;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001064;transcript_name=HG002_chrY_T0001064;gene_name=ENSG00000296934;ID=exon:HG002_chrY_T0001064:0;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10202767	10204187	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001064;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001064;transcript_name=HG002_chrY_T0001064;gene_name=ENSG00000296934;ID=intron:HG002_chrY_T0001064:0;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10204188	10204201	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001064;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001064;transcript_name=HG002_chrY_T0001064;gene_name=ENSG00000296934;ID=exon:HG002_chrY_T0001064:1;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10204202	10204854	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001064;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001064;transcript_name=HG002_chrY_T0001064;gene_name=ENSG00000296934;ID=intron:HG002_chrY_T0001064:1;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10204855	10204977	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001064;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001064;transcript_name=HG002_chrY_T0001064;gene_name=ENSG00000296934;ID=exon:HG002_chrY_T0001064:2;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10204978	10205084	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001064;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001064;transcript_name=HG002_chrY_T0001064;gene_name=ENSG00000296934;ID=intron:HG002_chrY_T0001064:2;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10205085	10205227	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001064;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001064;transcript_name=HG002_chrY_T0001064;gene_name=ENSG00000296934;ID=exon:HG002_chrY_T0001064:3;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10205228	10205326	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001064;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001064;transcript_name=HG002_chrY_T0001064;gene_name=ENSG00000296934;ID=intron:HG002_chrY_T0001064:3;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10205327	10205437	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001064;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001064;transcript_name=HG002_chrY_T0001064;gene_name=ENSG00000296934;ID=exon:HG002_chrY_T0001064:4;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10205438	10205565	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001064;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001064;transcript_name=HG002_chrY_T0001064;gene_name=ENSG00000296934;ID=intron:HG002_chrY_T0001064:4;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10205566	10206717	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001064;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001064;transcript_name=HG002_chrY_T0001064;gene_name=ENSG00000296934;ID=exon:HG002_chrY_T0001064:5;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10203641	10206706	1000	-	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001065;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_G0000345;transcript_name=HG002_chrY_T0001065;gene_name=ENSG00000296934;ID=HG002_chrY_T0001065;Name=ENSG00000296934
HG002_chrY	CAT	exon	10203641	10204201	.	-	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001065;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001065;transcript_name=HG002_chrY_T0001065;gene_name=ENSG00000296934;ID=exon:HG002_chrY_T0001065:0;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10204202	10204854	.	-	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001065;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001065;transcript_name=HG002_chrY_T0001065;gene_name=ENSG00000296934;ID=intron:HG002_chrY_T0001065:0;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10204855	10204977	.	-	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001065;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001065;transcript_name=HG002_chrY_T0001065;gene_name=ENSG00000296934;ID=exon:HG002_chrY_T0001065:1;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10204978	10205084	.	-	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001065;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001065;transcript_name=HG002_chrY_T0001065;gene_name=ENSG00000296934;ID=intron:HG002_chrY_T0001065:1;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10205085	10205227	.	-	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001065;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001065;transcript_name=HG002_chrY_T0001065;gene_name=ENSG00000296934;ID=exon:HG002_chrY_T0001065:2;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10205228	10205326	.	-	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001065;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001065;transcript_name=HG002_chrY_T0001065;gene_name=ENSG00000296934;ID=intron:HG002_chrY_T0001065:2;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10205327	10205437	.	-	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001065;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001065;transcript_name=HG002_chrY_T0001065;gene_name=ENSG00000296934;ID=exon:HG002_chrY_T0001065:3;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10205438	10205565	.	-	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001065;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001065;transcript_name=HG002_chrY_T0001065;gene_name=ENSG00000296934;ID=intron:HG002_chrY_T0001065:3;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10205566	10206706	.	-	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=HG002_chrY_T0001065;gene_id=HG002_chrY_G0000345;Parent=HG002_chrY_T0001065;transcript_name=HG002_chrY_T0001065;gene_name=ENSG00000296934;ID=exon:HG002_chrY_T0001065:4;Name=ENSG00000296934;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	10199254	10199740	.	+	.	source_gene_common_name=ENSG00000275352;source_gene=ENSG00000275352.1;gene_id=HG002_chrY_G0000346;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000275352;gene_sources=liftoff;ID=HG002_chrY_G0000346;Name=ENSG00000275352
HG002_chrY	CAT	transcript	10199254	10199740	1000	+	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=299.658;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;transcript_id=HG002_chrY_T0001062;gene_id=HG002_chrY_G0000346;Parent=HG002_chrY_G0000346;transcript_name=HG002_chrY_T0001062;gene_name=ENSG00000275352;ID=HG002_chrY_T0001062;Name=ENSG00000275352
HG002_chrY	CAT	exon	10199254	10199317	.	+	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=299.658;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;transcript_id=HG002_chrY_T0001062;gene_id=HG002_chrY_G0000346;Parent=HG002_chrY_T0001062;transcript_name=HG002_chrY_T0001062;gene_name=ENSG00000275352;ID=exon:HG002_chrY_T0001062:0;Name=ENSG00000275352;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10199318	10199406	.	+	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=299.658;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;transcript_id=HG002_chrY_T0001062;gene_id=HG002_chrY_G0000346;Parent=HG002_chrY_T0001062;transcript_name=HG002_chrY_T0001062;gene_name=ENSG00000275352;ID=intron:HG002_chrY_T0001062:0;Name=ENSG00000275352;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10199407	10199551	.	+	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=299.658;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;transcript_id=HG002_chrY_T0001062;gene_id=HG002_chrY_G0000346;Parent=HG002_chrY_T0001062;transcript_name=HG002_chrY_T0001062;gene_name=ENSG00000275352;ID=exon:HG002_chrY_T0001062:1;Name=ENSG00000275352;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10199552	10199657	.	+	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=299.658;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;transcript_id=HG002_chrY_T0001062;gene_id=HG002_chrY_G0000346;Parent=HG002_chrY_T0001062;transcript_name=HG002_chrY_T0001062;gene_name=ENSG00000275352;ID=intron:HG002_chrY_T0001062:1;Name=ENSG00000275352;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10199658	10199740	.	+	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=299.658;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;transcript_id=HG002_chrY_T0001062;gene_id=HG002_chrY_G0000346;Parent=HG002_chrY_T0001062;transcript_name=HG002_chrY_T0001062;gene_name=ENSG00000275352;ID=exon:HG002_chrY_T0001062:2;Name=ENSG00000275352;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	10204044	10206726	.	-	.	source_gene_common_name=TSPY11P;source_gene=ENSG00000238235.1;gene_id=HG002_chrY_G0000347;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY11P;gene_sources=liftoff;ID=HG002_chrY_G0000347;Name=TSPY11P
HG002_chrY	CAT	transcript	10204044	10206726	1000	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG002_chrY_T0001066;gene_id=HG002_chrY_G0000347;Parent=HG002_chrY_G0000347;transcript_name=HG002_chrY_T0001066;gene_name=TSPY11P;ID=HG002_chrY_T0001066;Name=TSPY11P
HG002_chrY	CAT	exon	10204044	10204190	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG002_chrY_T0001066;gene_id=HG002_chrY_G0000347;Parent=HG002_chrY_T0001066;transcript_name=HG002_chrY_T0001066;gene_name=TSPY11P;ID=exon:HG002_chrY_T0001066:0;Name=TSPY11P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10204191	10204888	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG002_chrY_T0001066;gene_id=HG002_chrY_G0000347;Parent=HG002_chrY_T0001066;transcript_name=HG002_chrY_T0001066;gene_name=TSPY11P;ID=intron:HG002_chrY_T0001066:0;Name=TSPY11P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10204889	10204977	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG002_chrY_T0001066;gene_id=HG002_chrY_G0000347;Parent=HG002_chrY_T0001066;transcript_name=HG002_chrY_T0001066;gene_name=TSPY11P;ID=exon:HG002_chrY_T0001066:1;Name=TSPY11P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10204978	10205084	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG002_chrY_T0001066;gene_id=HG002_chrY_G0000347;Parent=HG002_chrY_T0001066;transcript_name=HG002_chrY_T0001066;gene_name=TSPY11P;ID=intron:HG002_chrY_T0001066:1;Name=TSPY11P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10205085	10205227	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG002_chrY_T0001066;gene_id=HG002_chrY_G0000347;Parent=HG002_chrY_T0001066;transcript_name=HG002_chrY_T0001066;gene_name=TSPY11P;ID=exon:HG002_chrY_T0001066:2;Name=TSPY11P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10205228	10205326	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG002_chrY_T0001066;gene_id=HG002_chrY_G0000347;Parent=HG002_chrY_T0001066;transcript_name=HG002_chrY_T0001066;gene_name=TSPY11P;ID=intron:HG002_chrY_T0001066:2;Name=TSPY11P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10205327	10205437	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG002_chrY_T0001066;gene_id=HG002_chrY_G0000347;Parent=HG002_chrY_T0001066;transcript_name=HG002_chrY_T0001066;gene_name=TSPY11P;ID=exon:HG002_chrY_T0001066:3;Name=TSPY11P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10205438	10205565	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG002_chrY_T0001066;gene_id=HG002_chrY_G0000347;Parent=HG002_chrY_T0001066;transcript_name=HG002_chrY_T0001066;gene_name=TSPY11P;ID=intron:HG002_chrY_T0001066:3;Name=TSPY11P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10205566	10205643	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG002_chrY_T0001066;gene_id=HG002_chrY_G0000347;Parent=HG002_chrY_T0001066;transcript_name=HG002_chrY_T0001066;gene_name=TSPY11P;ID=exon:HG002_chrY_T0001066:4;Name=TSPY11P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10205644	10206249	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG002_chrY_T0001066;gene_id=HG002_chrY_G0000347;Parent=HG002_chrY_T0001066;transcript_name=HG002_chrY_T0001066;gene_name=TSPY11P;ID=intron:HG002_chrY_T0001066:4;Name=TSPY11P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10206250	10206726	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG002_chrY_T0001066;gene_id=HG002_chrY_G0000347;Parent=HG002_chrY_T0001066;transcript_name=HG002_chrY_T0001066;gene_name=TSPY11P;ID=exon:HG002_chrY_T0001066:5;Name=TSPY11P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	10207724	10209717	.	+	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9;gene_id=HG002_chrY_G0000348;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG002_chrY_G0000348;Name=FAM197Y9
HG002_chrY	CAT	transcript	10207724	10209717	1000	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0001067;gene_id=HG002_chrY_G0000348;Parent=HG002_chrY_G0000348;transcript_name=HG002_chrY_T0001067;gene_name=FAM197Y9;ID=HG002_chrY_T0001067;Name=FAM197Y9
HG002_chrY	CAT	exon	10207724	10208033	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0001067;gene_id=HG002_chrY_G0000348;Parent=HG002_chrY_T0001067;transcript_name=HG002_chrY_T0001067;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0001067:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10208034	10209375	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0001067;gene_id=HG002_chrY_G0000348;Parent=HG002_chrY_T0001067;transcript_name=HG002_chrY_T0001067;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0001067:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10209376	10209459	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0001067;gene_id=HG002_chrY_G0000348;Parent=HG002_chrY_T0001067;transcript_name=HG002_chrY_T0001067;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0001067:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10209460	10209571	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0001067;gene_id=HG002_chrY_G0000348;Parent=HG002_chrY_T0001067;transcript_name=HG002_chrY_T0001067;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0001067:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10209572	10209717	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0001067;gene_id=HG002_chrY_G0000348;Parent=HG002_chrY_T0001067;transcript_name=HG002_chrY_T0001067;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0001067:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	10209366	10217053	.	+	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1;gene_id=HG002_chrY_G0000349;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG002_chrY_G0000349;Name=FAM197Y9
HG002_chrY	CAT	transcript	10209366	10217053	1000	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0001068;gene_id=HG002_chrY_G0000349;Parent=HG002_chrY_G0000349;transcript_name=HG002_chrY_T0001068;gene_name=FAM197Y9;ID=HG002_chrY_T0001068;Name=FAM197Y9
HG002_chrY	CAT	exon	10209366	10209485	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0001068;gene_id=HG002_chrY_G0000349;Parent=HG002_chrY_T0001068;transcript_name=HG002_chrY_T0001068;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0001068:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10209486	10211290	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0001068;gene_id=HG002_chrY_G0000349;Parent=HG002_chrY_T0001068;transcript_name=HG002_chrY_T0001068;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0001068:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10211291	10211376	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0001068;gene_id=HG002_chrY_G0000349;Parent=HG002_chrY_T0001068;transcript_name=HG002_chrY_T0001068;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0001068:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10211377	10214927	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0001068;gene_id=HG002_chrY_G0000349;Parent=HG002_chrY_T0001068;transcript_name=HG002_chrY_T0001068;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0001068:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10214928	10217053	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0001068;gene_id=HG002_chrY_G0000349;Parent=HG002_chrY_T0001068;transcript_name=HG002_chrY_T0001068;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0001068:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10209384	10214987	1000	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0001069;gene_id=HG002_chrY_G0000349;Parent=HG002_chrY_G0000349;transcript_name=HG002_chrY_T0001069;gene_name=FAM197Y9;ID=HG002_chrY_T0001069;Name=FAM197Y9
HG002_chrY	CAT	exon	10209384	10209485	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0001069;gene_id=HG002_chrY_G0000349;Parent=HG002_chrY_T0001069;transcript_name=HG002_chrY_T0001069;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0001069:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10209486	10209571	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0001069;gene_id=HG002_chrY_G0000349;Parent=HG002_chrY_T0001069;transcript_name=HG002_chrY_T0001069;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0001069:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10209572	10209717	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0001069;gene_id=HG002_chrY_G0000349;Parent=HG002_chrY_T0001069;transcript_name=HG002_chrY_T0001069;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0001069:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10209718	10211217	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0001069;gene_id=HG002_chrY_G0000349;Parent=HG002_chrY_T0001069;transcript_name=HG002_chrY_T0001069;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0001069:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10211218	10211376	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0001069;gene_id=HG002_chrY_G0000349;Parent=HG002_chrY_T0001069;transcript_name=HG002_chrY_T0001069;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0001069:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10211377	10214927	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0001069;gene_id=HG002_chrY_G0000349;Parent=HG002_chrY_T0001069;transcript_name=HG002_chrY_T0001069;gene_name=FAM197Y9;ID=intron:HG002_chrY_T0001069:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10214928	10214987	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG002_chrY_T0001069;gene_id=HG002_chrY_G0000349;Parent=HG002_chrY_T0001069;transcript_name=HG002_chrY_T0001069;gene_name=FAM197Y9;ID=exon:HG002_chrY_T0001069:3;Name=FAM197Y9;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	10224299	10227095	.	-	.	source_gene_common_name=TSPY2;source_gene=ENSG00000168757.13;gene_id=HG002_chrY_G0000350;gene_biotype=protein_coding;gene_name=TSPY2;gene_sources=liftoff;ID=HG002_chrY_G0000350;Name=TSPY2
HG002_chrY	CAT	transcript	10224299	10227049	1000	-	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001070;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_G0000350;transcript_name=HG002_chrY_T0001070;gene_name=TSPY2;ID=HG002_chrY_T0001070;Name=TSPY2
HG002_chrY	CAT	exon	10224299	10225082	.	-	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001070;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001070;transcript_name=HG002_chrY_T0001070;gene_name=TSPY2;ID=exon:HG002_chrY_T0001070:0;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10225083	10225209	.	-	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001070;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001070;transcript_name=HG002_chrY_T0001070;gene_name=TSPY2;ID=intron:HG002_chrY_T0001070:0;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10225210	10225756	.	-	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001070;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001070;transcript_name=HG002_chrY_T0001070;gene_name=TSPY2;ID=exon:HG002_chrY_T0001070:1;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10225757	10225884	.	-	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001070;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001070;transcript_name=HG002_chrY_T0001070;gene_name=TSPY2;ID=intron:HG002_chrY_T0001070:1;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10225885	10225962	.	-	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001070;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001070;transcript_name=HG002_chrY_T0001070;gene_name=TSPY2;ID=exon:HG002_chrY_T0001070:2;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10225963	10226563	.	-	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001070;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001070;transcript_name=HG002_chrY_T0001070;gene_name=TSPY2;ID=intron:HG002_chrY_T0001070:2;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10226564	10227049	.	-	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001070;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001070;transcript_name=HG002_chrY_T0001070;gene_name=TSPY2;ID=exon:HG002_chrY_T0001070:3;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10224300	10227095	100	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001071;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_G0000350;transcript_name=HG002_chrY_T0001071;gene_name=TSPY2;ID=HG002_chrY_T0001071;Name=TSPY2
HG002_chrY	CAT	exon	10224300	10224515	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001071;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001071;transcript_name=HG002_chrY_T0001071;gene_name=TSPY2;ID=exon:HG002_chrY_T0001071:0;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	10224493	10224515	.	-	2	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001071;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001071;transcript_name=HG002_chrY_T0001071;gene_name=TSPY2;ID=CDS:HG002_chrY_T0001071:0;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10224516	10225209	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001071;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001071;transcript_name=HG002_chrY_T0001071;gene_name=TSPY2;ID=intron:HG002_chrY_T0001071:0;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10225210	10225291	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001071;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001071;transcript_name=HG002_chrY_T0001071;gene_name=TSPY2;ID=exon:HG002_chrY_T0001071:1;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	10225210	10225291	.	-	0	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001071;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001071;transcript_name=HG002_chrY_T0001071;gene_name=TSPY2;ID=CDS:HG002_chrY_T0001071:1;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10225292	10225397	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001071;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001071;transcript_name=HG002_chrY_T0001071;gene_name=TSPY2;ID=intron:HG002_chrY_T0001071:1;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10225398	10225543	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001071;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001071;transcript_name=HG002_chrY_T0001071;gene_name=TSPY2;ID=exon:HG002_chrY_T0001071:2;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	10225398	10225543	.	-	2	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001071;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001071;transcript_name=HG002_chrY_T0001071;gene_name=TSPY2;ID=CDS:HG002_chrY_T0001071:2;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10225544	10225644	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001071;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001071;transcript_name=HG002_chrY_T0001071;gene_name=TSPY2;ID=intron:HG002_chrY_T0001071:2;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10225645	10225756	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001071;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001071;transcript_name=HG002_chrY_T0001071;gene_name=TSPY2;ID=exon:HG002_chrY_T0001071:3;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	10225645	10225756	.	-	0	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001071;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001071;transcript_name=HG002_chrY_T0001071;gene_name=TSPY2;ID=CDS:HG002_chrY_T0001071:3;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10225757	10225884	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001071;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001071;transcript_name=HG002_chrY_T0001071;gene_name=TSPY2;ID=intron:HG002_chrY_T0001071:3;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10225885	10225962	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001071;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001071;transcript_name=HG002_chrY_T0001071;gene_name=TSPY2;ID=exon:HG002_chrY_T0001071:4;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	10225885	10225962	.	-	0	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001071;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001071;transcript_name=HG002_chrY_T0001071;gene_name=TSPY2;ID=CDS:HG002_chrY_T0001071:4;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10225963	10226563	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001071;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001071;transcript_name=HG002_chrY_T0001071;gene_name=TSPY2;ID=intron:HG002_chrY_T0001071:4;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10226564	10227095	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001071;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001071;transcript_name=HG002_chrY_T0001071;gene_name=TSPY2;ID=exon:HG002_chrY_T0001071:5;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	10226564	10227049	.	-	0	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001071;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001071;transcript_name=HG002_chrY_T0001071;gene_name=TSPY2;ID=CDS:HG002_chrY_T0001071:5;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	10227047	10227049	.	-	0	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001071;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001071;transcript_name=HG002_chrY_T0001071;gene_name=TSPY2;ID=start_codon:HG002_chrY_T0001071;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10224306	10227049	10000	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001072;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_G0000350;transcript_name=HG002_chrY_T0001072;gene_name=TSPY2;ID=HG002_chrY_T0001072;Name=TSPY2
HG002_chrY	CAT	exon	10224306	10224515	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001072;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001072;transcript_name=HG002_chrY_T0001072;gene_name=TSPY2;ID=exon:HG002_chrY_T0001072:0;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10224516	10225209	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001072;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001072;transcript_name=HG002_chrY_T0001072;gene_name=TSPY2;ID=intron:HG002_chrY_T0001072:0;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10225210	10225302	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001072;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001072;transcript_name=HG002_chrY_T0001072;gene_name=TSPY2;ID=exon:HG002_chrY_T0001072:1;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	10225240	10225302	.	-	0	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001072;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001072;transcript_name=HG002_chrY_T0001072;gene_name=TSPY2;ID=CDS:HG002_chrY_T0001072:0;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	10225240	10225242	.	-	0	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001072;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001072;transcript_name=HG002_chrY_T0001072;gene_name=TSPY2;ID=stop_codon:HG002_chrY_T0001072;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10225303	10225397	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001072;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001072;transcript_name=HG002_chrY_T0001072;gene_name=TSPY2;ID=intron:HG002_chrY_T0001072:1;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10225398	10225543	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001072;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001072;transcript_name=HG002_chrY_T0001072;gene_name=TSPY2;ID=exon:HG002_chrY_T0001072:2;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	10225398	10225543	.	-	2	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001072;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001072;transcript_name=HG002_chrY_T0001072;gene_name=TSPY2;ID=CDS:HG002_chrY_T0001072:1;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10225544	10225644	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001072;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001072;transcript_name=HG002_chrY_T0001072;gene_name=TSPY2;ID=intron:HG002_chrY_T0001072:2;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10225645	10225756	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001072;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001072;transcript_name=HG002_chrY_T0001072;gene_name=TSPY2;ID=exon:HG002_chrY_T0001072:3;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	10225645	10225756	.	-	0	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001072;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001072;transcript_name=HG002_chrY_T0001072;gene_name=TSPY2;ID=CDS:HG002_chrY_T0001072:2;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10225757	10225884	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001072;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001072;transcript_name=HG002_chrY_T0001072;gene_name=TSPY2;ID=intron:HG002_chrY_T0001072:3;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10225885	10225962	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001072;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001072;transcript_name=HG002_chrY_T0001072;gene_name=TSPY2;ID=exon:HG002_chrY_T0001072:4;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	10225885	10225962	.	-	0	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001072;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001072;transcript_name=HG002_chrY_T0001072;gene_name=TSPY2;ID=CDS:HG002_chrY_T0001072:3;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10225963	10226563	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001072;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001072;transcript_name=HG002_chrY_T0001072;gene_name=TSPY2;ID=intron:HG002_chrY_T0001072:4;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10226564	10227049	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001072;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001072;transcript_name=HG002_chrY_T0001072;gene_name=TSPY2;ID=exon:HG002_chrY_T0001072:5;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	10226564	10227049	.	-	0	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001072;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001072;transcript_name=HG002_chrY_T0001072;gene_name=TSPY2;ID=CDS:HG002_chrY_T0001072:4;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	10227047	10227049	.	-	0	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001072;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001072;transcript_name=HG002_chrY_T0001072;gene_name=TSPY2;ID=start_codon:HG002_chrY_T0001072;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10224314	10225695	1000	-	.	source_transcript=ENST00000464674.1;source_transcript_name=TSPY2-204;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000464674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000464674.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001073;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_G0000350;transcript_name=HG002_chrY_T0001073;gene_name=TSPY2;ID=HG002_chrY_T0001073;Name=TSPY2
HG002_chrY	CAT	exon	10224314	10224515	.	-	.	source_transcript=ENST00000464674.1;source_transcript_name=TSPY2-204;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000464674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000464674.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001073;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001073;transcript_name=HG002_chrY_T0001073;gene_name=TSPY2;ID=exon:HG002_chrY_T0001073:0;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10224516	10225209	.	-	.	source_transcript=ENST00000464674.1;source_transcript_name=TSPY2-204;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000464674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000464674.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001073;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001073;transcript_name=HG002_chrY_T0001073;gene_name=TSPY2;ID=intron:HG002_chrY_T0001073:0;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10225210	10225291	.	-	.	source_transcript=ENST00000464674.1;source_transcript_name=TSPY2-204;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000464674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000464674.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001073;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001073;transcript_name=HG002_chrY_T0001073;gene_name=TSPY2;ID=exon:HG002_chrY_T0001073:1;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10225292	10225397	.	-	.	source_transcript=ENST00000464674.1;source_transcript_name=TSPY2-204;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000464674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000464674.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001073;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001073;transcript_name=HG002_chrY_T0001073;gene_name=TSPY2;ID=intron:HG002_chrY_T0001073:1;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10225398	10225695	.	-	.	source_transcript=ENST00000464674.1;source_transcript_name=TSPY2-204;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000464674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000464674.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001073;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001073;transcript_name=HG002_chrY_T0001073;gene_name=TSPY2;ID=exon:HG002_chrY_T0001073:2;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10224426	10227095	100	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001074;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_G0000350;transcript_name=HG002_chrY_T0001074;gene_name=TSPY2;ID=HG002_chrY_T0001074;Name=TSPY2
HG002_chrY	CAT	exon	10224426	10224515	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001074;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001074;transcript_name=HG002_chrY_T0001074;gene_name=TSPY2;ID=exon:HG002_chrY_T0001074:0;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	10224493	10224515	.	-	2	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001074;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001074;transcript_name=HG002_chrY_T0001074;gene_name=TSPY2;ID=CDS:HG002_chrY_T0001074:0;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10224516	10225209	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001074;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001074;transcript_name=HG002_chrY_T0001074;gene_name=TSPY2;ID=intron:HG002_chrY_T0001074:0;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10225210	10225291	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001074;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001074;transcript_name=HG002_chrY_T0001074;gene_name=TSPY2;ID=exon:HG002_chrY_T0001074:1;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	10225210	10225291	.	-	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001074;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001074;transcript_name=HG002_chrY_T0001074;gene_name=TSPY2;ID=CDS:HG002_chrY_T0001074:1;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10225292	10225397	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001074;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001074;transcript_name=HG002_chrY_T0001074;gene_name=TSPY2;ID=intron:HG002_chrY_T0001074:1;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10225398	10225543	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001074;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001074;transcript_name=HG002_chrY_T0001074;gene_name=TSPY2;ID=exon:HG002_chrY_T0001074:2;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	10225398	10225543	.	-	2	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001074;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001074;transcript_name=HG002_chrY_T0001074;gene_name=TSPY2;ID=CDS:HG002_chrY_T0001074:2;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10225544	10225644	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001074;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001074;transcript_name=HG002_chrY_T0001074;gene_name=TSPY2;ID=intron:HG002_chrY_T0001074:2;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10225645	10225756	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001074;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001074;transcript_name=HG002_chrY_T0001074;gene_name=TSPY2;ID=exon:HG002_chrY_T0001074:3;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	10225645	10225756	.	-	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001074;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001074;transcript_name=HG002_chrY_T0001074;gene_name=TSPY2;ID=CDS:HG002_chrY_T0001074:3;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10225757	10225884	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001074;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001074;transcript_name=HG002_chrY_T0001074;gene_name=TSPY2;ID=intron:HG002_chrY_T0001074:3;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10225885	10225962	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001074;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001074;transcript_name=HG002_chrY_T0001074;gene_name=TSPY2;ID=exon:HG002_chrY_T0001074:4;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	10225885	10225962	.	-	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001074;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001074;transcript_name=HG002_chrY_T0001074;gene_name=TSPY2;ID=CDS:HG002_chrY_T0001074:4;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10225963	10226563	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001074;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001074;transcript_name=HG002_chrY_T0001074;gene_name=TSPY2;ID=intron:HG002_chrY_T0001074:4;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10226564	10226701	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001074;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001074;transcript_name=HG002_chrY_T0001074;gene_name=TSPY2;ID=exon:HG002_chrY_T0001074:5;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	10226564	10226701	.	-	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001074;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001074;transcript_name=HG002_chrY_T0001074;gene_name=TSPY2;ID=CDS:HG002_chrY_T0001074:5;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10226702	10226962	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001074;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001074;transcript_name=HG002_chrY_T0001074;gene_name=TSPY2;ID=intron:HG002_chrY_T0001074:5;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10226963	10227095	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001074;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001074;transcript_name=HG002_chrY_T0001074;gene_name=TSPY2;ID=exon:HG002_chrY_T0001074:6;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	10226963	10227049	.	-	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001074;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001074;transcript_name=HG002_chrY_T0001074;gene_name=TSPY2;ID=CDS:HG002_chrY_T0001074:6;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	10227047	10227049	.	-	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG002_chrY_T0001074;gene_id=HG002_chrY_G0000350;Parent=HG002_chrY_T0001074;transcript_name=HG002_chrY_T0001074;gene_name=TSPY2;ID=start_codon:HG002_chrY_T0001074;Name=TSPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	10227227	10232045	.	+	.	source_gene_common_name=ENSG00000290369;source_gene=ENSG00000290369.2;gene_id=HG002_chrY_G0000351;gene_biotype=lncRNA;gene_name=ENSG00000290369;gene_sources=liftoff;ID=HG002_chrY_G0000351;Name=ENSG00000290369
HG002_chrY	CAT	transcript	10227227	10231866	1000	+	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001075;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_G0000351;transcript_name=HG002_chrY_T0001075;gene_name=ENSG00000290369;ID=HG002_chrY_T0001075;Name=ENSG00000290369
HG002_chrY	CAT	exon	10227227	10227412	.	+	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001075;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001075;transcript_name=HG002_chrY_T0001075;gene_name=ENSG00000290369;ID=exon:HG002_chrY_T0001075:0;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10227413	10229347	.	+	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001075;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001075;transcript_name=HG002_chrY_T0001075;gene_name=ENSG00000290369;ID=intron:HG002_chrY_T0001075:0;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10229348	10229470	.	+	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001075;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001075;transcript_name=HG002_chrY_T0001075;gene_name=ENSG00000290369;ID=exon:HG002_chrY_T0001075:1;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10229471	10229665	.	+	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001075;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001075;transcript_name=HG002_chrY_T0001075;gene_name=ENSG00000290369;ID=intron:HG002_chrY_T0001075:1;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10229666	10229755	.	+	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001075;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001075;transcript_name=HG002_chrY_T0001075;gene_name=ENSG00000290369;ID=exon:HG002_chrY_T0001075:2;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10229756	10229868	.	+	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001075;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001075;transcript_name=HG002_chrY_T0001075;gene_name=ENSG00000290369;ID=intron:HG002_chrY_T0001075:2;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10229869	10230014	.	+	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001075;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001075;transcript_name=HG002_chrY_T0001075;gene_name=ENSG00000290369;ID=exon:HG002_chrY_T0001075:3;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10230015	10230554	.	+	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001075;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001075;transcript_name=HG002_chrY_T0001075;gene_name=ENSG00000290369;ID=intron:HG002_chrY_T0001075:3;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10230555	10231866	.	+	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001075;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001075;transcript_name=HG002_chrY_T0001075;gene_name=ENSG00000290369;ID=exon:HG002_chrY_T0001075:4;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10227238	10232045	1000	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001076;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_G0000351;transcript_name=HG002_chrY_T0001076;gene_name=ENSG00000290369;ID=HG002_chrY_T0001076;Name=ENSG00000290369
HG002_chrY	CAT	exon	10227238	10227412	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001076;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001076;transcript_name=HG002_chrY_T0001076;gene_name=ENSG00000290369;ID=exon:HG002_chrY_T0001076:0;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10227413	10229347	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001076;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001076;transcript_name=HG002_chrY_T0001076;gene_name=ENSG00000290369;ID=intron:HG002_chrY_T0001076:0;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10229348	10229470	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001076;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001076;transcript_name=HG002_chrY_T0001076;gene_name=ENSG00000290369;ID=exon:HG002_chrY_T0001076:1;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10229471	10229665	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001076;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001076;transcript_name=HG002_chrY_T0001076;gene_name=ENSG00000290369;ID=intron:HG002_chrY_T0001076:1;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10229666	10229755	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001076;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001076;transcript_name=HG002_chrY_T0001076;gene_name=ENSG00000290369;ID=exon:HG002_chrY_T0001076:2;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10229756	10229868	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001076;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001076;transcript_name=HG002_chrY_T0001076;gene_name=ENSG00000290369;ID=intron:HG002_chrY_T0001076:2;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10229869	10230014	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001076;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001076;transcript_name=HG002_chrY_T0001076;gene_name=ENSG00000290369;ID=exon:HG002_chrY_T0001076:3;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10230015	10230787	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001076;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001076;transcript_name=HG002_chrY_T0001076;gene_name=ENSG00000290369;ID=intron:HG002_chrY_T0001076:3;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10230788	10230895	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001076;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001076;transcript_name=HG002_chrY_T0001076;gene_name=ENSG00000290369;ID=exon:HG002_chrY_T0001076:4;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10230896	10231447	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001076;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001076;transcript_name=HG002_chrY_T0001076;gene_name=ENSG00000290369;ID=intron:HG002_chrY_T0001076:4;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10231448	10232045	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001076;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001076;transcript_name=HG002_chrY_T0001076;gene_name=ENSG00000290369;ID=exon:HG002_chrY_T0001076:5;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10227249	10231866	1000	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001077;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_G0000351;transcript_name=HG002_chrY_T0001077;gene_name=ENSG00000290369;ID=HG002_chrY_T0001077;Name=ENSG00000290369
HG002_chrY	CAT	exon	10227249	10227412	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001077;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001077;transcript_name=HG002_chrY_T0001077;gene_name=ENSG00000290369;ID=exon:HG002_chrY_T0001077:0;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10227413	10229347	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001077;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001077;transcript_name=HG002_chrY_T0001077;gene_name=ENSG00000290369;ID=intron:HG002_chrY_T0001077:0;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10229348	10229470	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001077;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001077;transcript_name=HG002_chrY_T0001077;gene_name=ENSG00000290369;ID=exon:HG002_chrY_T0001077:1;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10229471	10229669	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001077;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001077;transcript_name=HG002_chrY_T0001077;gene_name=ENSG00000290369;ID=intron:HG002_chrY_T0001077:1;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10229670	10229755	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001077;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001077;transcript_name=HG002_chrY_T0001077;gene_name=ENSG00000290369;ID=exon:HG002_chrY_T0001077:2;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10229756	10229868	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001077;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001077;transcript_name=HG002_chrY_T0001077;gene_name=ENSG00000290369;ID=intron:HG002_chrY_T0001077:2;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10229869	10230014	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001077;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001077;transcript_name=HG002_chrY_T0001077;gene_name=ENSG00000290369;ID=exon:HG002_chrY_T0001077:3;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10230015	10230554	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001077;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001077;transcript_name=HG002_chrY_T0001077;gene_name=ENSG00000290369;ID=intron:HG002_chrY_T0001077:3;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10230555	10230607	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001077;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001077;transcript_name=HG002_chrY_T0001077;gene_name=ENSG00000290369;ID=exon:HG002_chrY_T0001077:4;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10230608	10230787	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001077;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001077;transcript_name=HG002_chrY_T0001077;gene_name=ENSG00000290369;ID=intron:HG002_chrY_T0001077:4;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10230788	10230895	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001077;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001077;transcript_name=HG002_chrY_T0001077;gene_name=ENSG00000290369;ID=exon:HG002_chrY_T0001077:5;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10230896	10231447	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001077;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001077;transcript_name=HG002_chrY_T0001077;gene_name=ENSG00000290369;ID=intron:HG002_chrY_T0001077:5;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10231448	10231866	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG002_chrY_T0001077;gene_id=HG002_chrY_G0000351;Parent=HG002_chrY_T0001077;transcript_name=HG002_chrY_T0001077;gene_name=ENSG00000290369;ID=exon:HG002_chrY_T0001077:6;Name=ENSG00000290369;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	10228035	10230014	.	+	.	source_gene_common_name=TTTY23B;source_gene=ENSG00000250204.3;gene_id=HG002_chrY_G0000352;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TTTY23B;gene_sources=liftoff;ID=HG002_chrY_G0000352;Name=TTTY23B
HG002_chrY	CAT	transcript	10228035	10230014	1000	+	.	source_transcript=ENST00000442790.2;source_transcript_name=TTTY23B-201;source_gene=ENSG00000250204.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250204.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442790.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442790.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=HG002_chrY_T0001078;gene_id=HG002_chrY_G0000352;Parent=HG002_chrY_G0000352;transcript_name=HG002_chrY_T0001078;gene_name=TTTY23B;ID=HG002_chrY_T0001078;Name=TTTY23B
HG002_chrY	CAT	exon	10228035	10228346	.	+	.	source_transcript=ENST00000442790.2;source_transcript_name=TTTY23B-201;source_gene=ENSG00000250204.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250204.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442790.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442790.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=HG002_chrY_T0001078;gene_id=HG002_chrY_G0000352;Parent=HG002_chrY_T0001078;transcript_name=HG002_chrY_T0001078;gene_name=TTTY23B;ID=exon:HG002_chrY_T0001078:0;Name=TTTY23B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10228347	10229665	.	+	.	source_transcript=ENST00000442790.2;source_transcript_name=TTTY23B-201;source_gene=ENSG00000250204.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250204.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442790.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442790.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=HG002_chrY_T0001078;gene_id=HG002_chrY_G0000352;Parent=HG002_chrY_T0001078;transcript_name=HG002_chrY_T0001078;gene_name=TTTY23B;ID=intron:HG002_chrY_T0001078:0;Name=TTTY23B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10229666	10229756	.	+	.	source_transcript=ENST00000442790.2;source_transcript_name=TTTY23B-201;source_gene=ENSG00000250204.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250204.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442790.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442790.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=HG002_chrY_T0001078;gene_id=HG002_chrY_G0000352;Parent=HG002_chrY_T0001078;transcript_name=HG002_chrY_T0001078;gene_name=TTTY23B;ID=exon:HG002_chrY_T0001078:1;Name=TTTY23B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10229757	10229868	.	+	.	source_transcript=ENST00000442790.2;source_transcript_name=TTTY23B-201;source_gene=ENSG00000250204.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250204.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442790.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442790.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=HG002_chrY_T0001078;gene_id=HG002_chrY_G0000352;Parent=HG002_chrY_T0001078;transcript_name=HG002_chrY_T0001078;gene_name=TTTY23B;ID=intron:HG002_chrY_T0001078:1;Name=TTTY23B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10229869	10230014	.	+	.	source_transcript=ENST00000442790.2;source_transcript_name=TTTY23B-201;source_gene=ENSG00000250204.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250204.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442790.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442790.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=HG002_chrY_T0001078;gene_id=HG002_chrY_G0000352;Parent=HG002_chrY_T0001078;transcript_name=HG002_chrY_T0001078;gene_name=TTTY23B;ID=exon:HG002_chrY_T0001078:2;Name=TTTY23B;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	10270482	10278350	.	+	.	source_gene_common_name=RBMY2OP;source_gene=ENSG00000234950.1;alternative_source_transcripts=ENST00000447105.1;gene_id=HG002_chrY_G0000353;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2OP;gene_sources=liftoff,transMap;ID=HG002_chrY_G0000353;Name=RBMY2OP
HG002_chrY	CAT	transcript	10270482	10278350	1000	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=HG002_chrY_T0001079;gene_id=HG002_chrY_G0000353;Parent=HG002_chrY_G0000353;transcript_name=HG002_chrY_T0001079;gene_name=RBMY2OP;ID=HG002_chrY_T0001079;Name=RBMY2OP
HG002_chrY	CAT	exon	10270482	10270590	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=HG002_chrY_T0001079;gene_id=HG002_chrY_G0000353;Parent=HG002_chrY_T0001079;transcript_name=HG002_chrY_T0001079;gene_name=RBMY2OP;ID=exon:HG002_chrY_T0001079:0;Name=RBMY2OP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10270591	10271049	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=HG002_chrY_T0001079;gene_id=HG002_chrY_G0000353;Parent=HG002_chrY_T0001079;transcript_name=HG002_chrY_T0001079;gene_name=RBMY2OP;ID=intron:HG002_chrY_T0001079:0;Name=RBMY2OP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10271050	10271125	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=HG002_chrY_T0001079;gene_id=HG002_chrY_G0000353;Parent=HG002_chrY_T0001079;transcript_name=HG002_chrY_T0001079;gene_name=RBMY2OP;ID=exon:HG002_chrY_T0001079:1;Name=RBMY2OP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10271126	10276366	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=HG002_chrY_T0001079;gene_id=HG002_chrY_G0000353;Parent=HG002_chrY_T0001079;transcript_name=HG002_chrY_T0001079;gene_name=RBMY2OP;ID=intron:HG002_chrY_T0001079:1;Name=RBMY2OP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10276367	10276479	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=HG002_chrY_T0001079;gene_id=HG002_chrY_G0000353;Parent=HG002_chrY_T0001079;transcript_name=HG002_chrY_T0001079;gene_name=RBMY2OP;ID=exon:HG002_chrY_T0001079:2;Name=RBMY2OP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10276480	10277345	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=HG002_chrY_T0001079;gene_id=HG002_chrY_G0000353;Parent=HG002_chrY_T0001079;transcript_name=HG002_chrY_T0001079;gene_name=RBMY2OP;ID=intron:HG002_chrY_T0001079:2;Name=RBMY2OP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10277346	10277625	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=HG002_chrY_T0001079;gene_id=HG002_chrY_G0000353;Parent=HG002_chrY_T0001079;transcript_name=HG002_chrY_T0001079;gene_name=RBMY2OP;ID=exon:HG002_chrY_T0001079:3;Name=RBMY2OP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10277626	10278038	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=HG002_chrY_T0001079;gene_id=HG002_chrY_G0000353;Parent=HG002_chrY_T0001079;transcript_name=HG002_chrY_T0001079;gene_name=RBMY2OP;ID=intron:HG002_chrY_T0001079:3;Name=RBMY2OP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10278039	10278350	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=HG002_chrY_T0001079;gene_id=HG002_chrY_G0000353;Parent=HG002_chrY_T0001079;transcript_name=HG002_chrY_T0001079;gene_name=RBMY2OP;ID=exon:HG002_chrY_T0001079:4;Name=RBMY2OP;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10270482	10278350	1000	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG002_chrY_T0001080;gene_id=HG002_chrY_G0000353;Parent=HG002_chrY_G0000353;transcript_name=HG002_chrY_T0001080;gene_name=RBMY2OP;ID=HG002_chrY_T0001080;Name=RBMY2OP
HG002_chrY	CAT	exon	10270482	10270590	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG002_chrY_T0001080;gene_id=HG002_chrY_G0000353;Parent=HG002_chrY_T0001080;transcript_name=HG002_chrY_T0001080;gene_name=RBMY2OP;ID=exon:HG002_chrY_T0001080:0;Name=RBMY2OP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10270591	10271049	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG002_chrY_T0001080;gene_id=HG002_chrY_G0000353;Parent=HG002_chrY_T0001080;transcript_name=HG002_chrY_T0001080;gene_name=RBMY2OP;ID=intron:HG002_chrY_T0001080:0;Name=RBMY2OP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10271050	10271125	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG002_chrY_T0001080;gene_id=HG002_chrY_G0000353;Parent=HG002_chrY_T0001080;transcript_name=HG002_chrY_T0001080;gene_name=RBMY2OP;ID=exon:HG002_chrY_T0001080:1;Name=RBMY2OP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10271126	10276366	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG002_chrY_T0001080;gene_id=HG002_chrY_G0000353;Parent=HG002_chrY_T0001080;transcript_name=HG002_chrY_T0001080;gene_name=RBMY2OP;ID=intron:HG002_chrY_T0001080:1;Name=RBMY2OP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10276367	10276479	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG002_chrY_T0001080;gene_id=HG002_chrY_G0000353;Parent=HG002_chrY_T0001080;transcript_name=HG002_chrY_T0001080;gene_name=RBMY2OP;ID=exon:HG002_chrY_T0001080:2;Name=RBMY2OP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10276480	10277345	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG002_chrY_T0001080;gene_id=HG002_chrY_G0000353;Parent=HG002_chrY_T0001080;transcript_name=HG002_chrY_T0001080;gene_name=RBMY2OP;ID=intron:HG002_chrY_T0001080:2;Name=RBMY2OP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10277346	10277456	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG002_chrY_T0001080;gene_id=HG002_chrY_G0000353;Parent=HG002_chrY_T0001080;transcript_name=HG002_chrY_T0001080;gene_name=RBMY2OP;ID=exon:HG002_chrY_T0001080:3;Name=RBMY2OP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10277457	10277536	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG002_chrY_T0001080;gene_id=HG002_chrY_G0000353;Parent=HG002_chrY_T0001080;transcript_name=HG002_chrY_T0001080;gene_name=RBMY2OP;ID=intron:HG002_chrY_T0001080:3;Name=RBMY2OP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10277537	10277625	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG002_chrY_T0001080;gene_id=HG002_chrY_G0000353;Parent=HG002_chrY_T0001080;transcript_name=HG002_chrY_T0001080;gene_name=RBMY2OP;ID=exon:HG002_chrY_T0001080:4;Name=RBMY2OP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10277626	10278038	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG002_chrY_T0001080;gene_id=HG002_chrY_G0000353;Parent=HG002_chrY_T0001080;transcript_name=HG002_chrY_T0001080;gene_name=RBMY2OP;ID=intron:HG002_chrY_T0001080:4;Name=RBMY2OP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10278039	10278350	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG002_chrY_T0001080;gene_id=HG002_chrY_G0000353;Parent=HG002_chrY_T0001080;transcript_name=HG002_chrY_T0001080;gene_name=RBMY2OP;ID=exon:HG002_chrY_T0001080:5;Name=RBMY2OP;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	10273459	10354248	.	-	.	source_gene_common_name=ENSG00000290344;source_gene=ENSG00000290344.2;gene_id=HG002_chrY_G0000354;gene_biotype=lncRNA;gene_name=ENSG00000290344;gene_sources=liftoff;ID=HG002_chrY_G0000354;Name=ENSG00000290344
HG002_chrY	CAT	transcript	10273459	10354245	1000	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001081;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_G0000354;transcript_name=HG002_chrY_T0001081;gene_name=ENSG00000290344;ID=HG002_chrY_T0001081;Name=ENSG00000290344
HG002_chrY	CAT	exon	10273459	10273619	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001081;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001081;transcript_name=HG002_chrY_T0001081;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001081:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10273620	10308115	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001081;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001081;transcript_name=HG002_chrY_T0001081;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001081:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10308116	10308165	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001081;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001081;transcript_name=HG002_chrY_T0001081;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001081:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10308166	10314523	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001081;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001081;transcript_name=HG002_chrY_T0001081;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001081:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10314524	10314642	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001081;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001081;transcript_name=HG002_chrY_T0001081;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001081:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10314643	10342140	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001081;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001081;transcript_name=HG002_chrY_T0001081;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001081:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342141	10342229	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001081;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001081;transcript_name=HG002_chrY_T0001081;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001081:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342230	10342315	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001081;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001081;transcript_name=HG002_chrY_T0001081;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001081:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342316	10342426	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001081;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001081;transcript_name=HG002_chrY_T0001081;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001081:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342427	10345455	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001081;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001081;transcript_name=HG002_chrY_T0001081;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001081:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10345456	10345564	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001081;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001081;transcript_name=HG002_chrY_T0001081;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001081:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10345565	10349334	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001081;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001081;transcript_name=HG002_chrY_T0001081;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001081:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10349335	10349512	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001081;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001081;transcript_name=HG002_chrY_T0001081;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001081:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10349513	10352500	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001081;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001081;transcript_name=HG002_chrY_T0001081;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001081:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10352501	10352601	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001081;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001081;transcript_name=HG002_chrY_T0001081;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001081:7;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10352602	10353033	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001081;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001081;transcript_name=HG002_chrY_T0001081;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001081:7;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10353034	10353133	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001081;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001081;transcript_name=HG002_chrY_T0001081;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001081:8;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10353134	10354099	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001081;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001081;transcript_name=HG002_chrY_T0001081;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001081:8;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10354100	10354245	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001081;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001081;transcript_name=HG002_chrY_T0001081;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001081:9;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10273459	10354211	1000	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001082;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_G0000354;transcript_name=HG002_chrY_T0001082;gene_name=ENSG00000290344;ID=HG002_chrY_T0001082;Name=ENSG00000290344
HG002_chrY	CAT	exon	10273459	10273619	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001082;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001082;transcript_name=HG002_chrY_T0001082;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001082:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10273620	10342140	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001082;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001082;transcript_name=HG002_chrY_T0001082;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001082:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342141	10342229	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001082;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001082;transcript_name=HG002_chrY_T0001082;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001082:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342230	10342315	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001082;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001082;transcript_name=HG002_chrY_T0001082;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001082:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342316	10342426	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001082;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001082;transcript_name=HG002_chrY_T0001082;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001082:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342427	10345455	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001082;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001082;transcript_name=HG002_chrY_T0001082;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001082:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10345456	10345564	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001082;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001082;transcript_name=HG002_chrY_T0001082;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001082:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10345565	10354099	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001082;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001082;transcript_name=HG002_chrY_T0001082;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001082:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10354100	10354211	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001082;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001082;transcript_name=HG002_chrY_T0001082;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001082:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10310556	10354211	1000	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001083;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_G0000354;transcript_name=HG002_chrY_T0001083;gene_name=ENSG00000290344;ID=HG002_chrY_T0001083;Name=ENSG00000290344
HG002_chrY	CAT	exon	10310556	10311137	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001083;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001083;transcript_name=HG002_chrY_T0001083;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001083:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10311138	10314523	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001083;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001083;transcript_name=HG002_chrY_T0001083;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001083:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10314524	10314642	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001083;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001083;transcript_name=HG002_chrY_T0001083;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001083:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10314643	10342140	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001083;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001083;transcript_name=HG002_chrY_T0001083;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001083:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342141	10342229	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001083;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001083;transcript_name=HG002_chrY_T0001083;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001083:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342230	10342315	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001083;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001083;transcript_name=HG002_chrY_T0001083;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001083:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342316	10342426	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001083;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001083;transcript_name=HG002_chrY_T0001083;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001083:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342427	10345455	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001083;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001083;transcript_name=HG002_chrY_T0001083;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001083:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10345456	10345564	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001083;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001083;transcript_name=HG002_chrY_T0001083;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001083:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10345565	10353033	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001083;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001083;transcript_name=HG002_chrY_T0001083;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001083:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10353034	10353133	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001083;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001083;transcript_name=HG002_chrY_T0001083;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001083:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10353134	10354099	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001083;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001083;transcript_name=HG002_chrY_T0001083;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001083:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10354100	10354211	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001083;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001083;transcript_name=HG002_chrY_T0001083;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001083:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10315068	10354211	1000	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001084;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_G0000354;transcript_name=HG002_chrY_T0001084;gene_name=ENSG00000290344;ID=HG002_chrY_T0001084;Name=ENSG00000290344
HG002_chrY	CAT	exon	10315068	10315395	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001084;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001084;transcript_name=HG002_chrY_T0001084;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001084:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10315396	10342140	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001084;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001084;transcript_name=HG002_chrY_T0001084;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001084:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342141	10342229	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001084;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001084;transcript_name=HG002_chrY_T0001084;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001084:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342230	10342315	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001084;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001084;transcript_name=HG002_chrY_T0001084;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001084:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342316	10342426	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001084;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001084;transcript_name=HG002_chrY_T0001084;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001084:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342427	10345455	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001084;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001084;transcript_name=HG002_chrY_T0001084;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001084:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10345456	10345564	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001084;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001084;transcript_name=HG002_chrY_T0001084;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001084:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10345565	10349334	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001084;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001084;transcript_name=HG002_chrY_T0001084;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001084:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10349335	10349512	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001084;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001084;transcript_name=HG002_chrY_T0001084;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001084:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10349513	10352500	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001084;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001084;transcript_name=HG002_chrY_T0001084;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001084:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10352501	10352601	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001084;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001084;transcript_name=HG002_chrY_T0001084;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001084:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10352602	10353033	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001084;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001084;transcript_name=HG002_chrY_T0001084;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001084:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10353034	10353133	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001084;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001084;transcript_name=HG002_chrY_T0001084;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001084:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10353134	10354099	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001084;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001084;transcript_name=HG002_chrY_T0001084;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001084:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10354100	10354211	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001084;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001084;transcript_name=HG002_chrY_T0001084;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001084:7;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10315068	10354209	1000	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001085;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_G0000354;transcript_name=HG002_chrY_T0001085;gene_name=ENSG00000290344;ID=HG002_chrY_T0001085;Name=ENSG00000290344
HG002_chrY	CAT	exon	10315068	10315395	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001085;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001085;transcript_name=HG002_chrY_T0001085;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001085:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10315396	10342140	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001085;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001085;transcript_name=HG002_chrY_T0001085;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001085:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342141	10342229	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001085;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001085;transcript_name=HG002_chrY_T0001085;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001085:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342230	10342315	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001085;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001085;transcript_name=HG002_chrY_T0001085;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001085:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342316	10342426	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001085;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001085;transcript_name=HG002_chrY_T0001085;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001085:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342427	10345455	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001085;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001085;transcript_name=HG002_chrY_T0001085;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001085:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10345456	10345564	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001085;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001085;transcript_name=HG002_chrY_T0001085;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001085:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10345565	10349334	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001085;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001085;transcript_name=HG002_chrY_T0001085;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001085:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10349335	10349512	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001085;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001085;transcript_name=HG002_chrY_T0001085;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001085:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10349513	10354068	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001085;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001085;transcript_name=HG002_chrY_T0001085;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001085:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10354069	10354209	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001085;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001085;transcript_name=HG002_chrY_T0001085;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001085:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10315071	10354227	1000	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001086;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_G0000354;transcript_name=HG002_chrY_T0001086;gene_name=ENSG00000290344;ID=HG002_chrY_T0001086;Name=ENSG00000290344
HG002_chrY	CAT	exon	10315071	10315395	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001086;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001086;transcript_name=HG002_chrY_T0001086;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001086:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10315396	10342140	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001086;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001086;transcript_name=HG002_chrY_T0001086;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001086:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342141	10342229	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001086;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001086;transcript_name=HG002_chrY_T0001086;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001086:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342230	10342315	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001086;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001086;transcript_name=HG002_chrY_T0001086;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001086:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342316	10342426	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001086;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001086;transcript_name=HG002_chrY_T0001086;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001086:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342427	10345455	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001086;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001086;transcript_name=HG002_chrY_T0001086;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001086:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10345456	10345564	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001086;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001086;transcript_name=HG002_chrY_T0001086;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001086:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10345565	10354068	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001086;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001086;transcript_name=HG002_chrY_T0001086;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001086:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10354069	10354227	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001086;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001086;transcript_name=HG002_chrY_T0001086;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001086:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10315082	10354211	1000	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001087;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_G0000354;transcript_name=HG002_chrY_T0001087;gene_name=ENSG00000290344;ID=HG002_chrY_T0001087;Name=ENSG00000290344
HG002_chrY	CAT	exon	10315082	10315395	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001087;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001087;transcript_name=HG002_chrY_T0001087;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001087:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10315396	10342140	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001087;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001087;transcript_name=HG002_chrY_T0001087;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001087:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342141	10342229	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001087;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001087;transcript_name=HG002_chrY_T0001087;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001087:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342230	10342315	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001087;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001087;transcript_name=HG002_chrY_T0001087;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001087:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342316	10342426	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001087;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001087;transcript_name=HG002_chrY_T0001087;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001087:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342427	10345455	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001087;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001087;transcript_name=HG002_chrY_T0001087;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001087:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10345456	10345564	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001087;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001087;transcript_name=HG002_chrY_T0001087;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001087:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10345565	10349334	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001087;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001087;transcript_name=HG002_chrY_T0001087;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001087:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10349335	10349512	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001087;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001087;transcript_name=HG002_chrY_T0001087;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001087:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10349513	10353033	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001087;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001087;transcript_name=HG002_chrY_T0001087;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001087:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10353034	10353133	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001087;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001087;transcript_name=HG002_chrY_T0001087;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001087:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10353134	10354099	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001087;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001087;transcript_name=HG002_chrY_T0001087;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001087:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10354100	10354211	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001087;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001087;transcript_name=HG002_chrY_T0001087;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001087:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10315082	10354248	1000	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001088;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_G0000354;transcript_name=HG002_chrY_T0001088;gene_name=ENSG00000290344;ID=HG002_chrY_T0001088;Name=ENSG00000290344
HG002_chrY	CAT	exon	10315082	10315395	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001088;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001088;transcript_name=HG002_chrY_T0001088;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001088:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10315396	10342140	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001088;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001088;transcript_name=HG002_chrY_T0001088;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001088:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342141	10342229	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001088;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001088;transcript_name=HG002_chrY_T0001088;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001088:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342230	10342315	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001088;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001088;transcript_name=HG002_chrY_T0001088;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001088:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342316	10342426	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001088;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001088;transcript_name=HG002_chrY_T0001088;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001088:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342427	10345455	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001088;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001088;transcript_name=HG002_chrY_T0001088;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001088:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10345456	10345564	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001088;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001088;transcript_name=HG002_chrY_T0001088;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001088:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10345565	10354099	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001088;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001088;transcript_name=HG002_chrY_T0001088;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001088:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10354100	10354248	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001088;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001088;transcript_name=HG002_chrY_T0001088;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001088:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10323525	10354251	1000	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001089;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_G0000354;transcript_name=HG002_chrY_T0001089;gene_name=ENSG00000290344;ID=HG002_chrY_T0001089;Name=ENSG00000290344
HG002_chrY	CAT	exon	10323525	10324111	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001089;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001089;transcript_name=HG002_chrY_T0001089;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001089:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10324112	10342140	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001089;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001089;transcript_name=HG002_chrY_T0001089;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001089:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342141	10342229	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001089;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001089;transcript_name=HG002_chrY_T0001089;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001089:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342230	10342315	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001089;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001089;transcript_name=HG002_chrY_T0001089;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001089:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342316	10342426	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001089;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001089;transcript_name=HG002_chrY_T0001089;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001089:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342427	10345455	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001089;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001089;transcript_name=HG002_chrY_T0001089;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001089:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10345456	10345564	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001089;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001089;transcript_name=HG002_chrY_T0001089;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001089:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10345565	10349334	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001089;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001089;transcript_name=HG002_chrY_T0001089;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001089:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10349335	10349512	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001089;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001089;transcript_name=HG002_chrY_T0001089;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001089:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10349513	10352500	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001089;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001089;transcript_name=HG002_chrY_T0001089;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001089:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10352501	10352601	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001089;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001089;transcript_name=HG002_chrY_T0001089;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001089:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10352602	10353033	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001089;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001089;transcript_name=HG002_chrY_T0001089;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001089:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10353034	10353133	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001089;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001089;transcript_name=HG002_chrY_T0001089;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001089:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10353134	10354068	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001089;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001089;transcript_name=HG002_chrY_T0001089;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001089:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10354069	10354251	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001089;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001089;transcript_name=HG002_chrY_T0001089;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001089:7;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10323901	10354277	1000	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001090;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_G0000354;transcript_name=HG002_chrY_T0001090;gene_name=ENSG00000290344;ID=HG002_chrY_T0001090;Name=ENSG00000290344
HG002_chrY	CAT	exon	10323901	10324111	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001090;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001090;transcript_name=HG002_chrY_T0001090;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001090:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10324112	10342140	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001090;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001090;transcript_name=HG002_chrY_T0001090;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001090:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342141	10342229	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001090;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001090;transcript_name=HG002_chrY_T0001090;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001090:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342230	10342315	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001090;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001090;transcript_name=HG002_chrY_T0001090;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001090:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342316	10342426	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001090;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001090;transcript_name=HG002_chrY_T0001090;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001090:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342427	10345455	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001090;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001090;transcript_name=HG002_chrY_T0001090;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001090:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10345456	10345564	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001090;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001090;transcript_name=HG002_chrY_T0001090;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001090:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10345565	10349334	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001090;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001090;transcript_name=HG002_chrY_T0001090;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001090:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10349335	10349512	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001090;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001090;transcript_name=HG002_chrY_T0001090;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001090:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10349513	10353033	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001090;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001090;transcript_name=HG002_chrY_T0001090;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001090:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10353034	10353133	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001090;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001090;transcript_name=HG002_chrY_T0001090;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001090:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10353134	10354068	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001090;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001090;transcript_name=HG002_chrY_T0001090;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001090:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10354069	10354277	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001090;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001090;transcript_name=HG002_chrY_T0001090;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001090:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10332015	10354225	1000	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001091;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_G0000354;transcript_name=HG002_chrY_T0001091;gene_name=ENSG00000290344;ID=HG002_chrY_T0001091;Name=ENSG00000290344
HG002_chrY	CAT	exon	10332015	10332279	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001091;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001091;transcript_name=HG002_chrY_T0001091;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001091:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10332280	10342140	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001091;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001091;transcript_name=HG002_chrY_T0001091;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001091:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342141	10342229	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001091;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001091;transcript_name=HG002_chrY_T0001091;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001091:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342230	10342315	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001091;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001091;transcript_name=HG002_chrY_T0001091;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001091:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342316	10342426	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001091;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001091;transcript_name=HG002_chrY_T0001091;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001091:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342427	10345455	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001091;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001091;transcript_name=HG002_chrY_T0001091;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001091:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10345456	10345564	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001091;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001091;transcript_name=HG002_chrY_T0001091;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001091:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10345565	10349334	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001091;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001091;transcript_name=HG002_chrY_T0001091;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001091:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10349335	10349512	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001091;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001091;transcript_name=HG002_chrY_T0001091;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001091:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10349513	10352500	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001091;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001091;transcript_name=HG002_chrY_T0001091;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001091:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10352501	10352601	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001091;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001091;transcript_name=HG002_chrY_T0001091;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001091:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10352602	10353033	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001091;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001091;transcript_name=HG002_chrY_T0001091;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001091:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10353034	10353133	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001091;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001091;transcript_name=HG002_chrY_T0001091;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001091:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10353134	10354068	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001091;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001091;transcript_name=HG002_chrY_T0001091;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001091:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10354069	10354225	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001091;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001091;transcript_name=HG002_chrY_T0001091;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001091:7;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10341150	10354225	1000	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001092;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_G0000354;transcript_name=HG002_chrY_T0001092;gene_name=ENSG00000290344;ID=HG002_chrY_T0001092;Name=ENSG00000290344
HG002_chrY	CAT	exon	10341150	10341539	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001092;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001092;transcript_name=HG002_chrY_T0001092;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001092:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10341540	10342140	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001092;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001092;transcript_name=HG002_chrY_T0001092;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001092:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342141	10342229	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001092;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001092;transcript_name=HG002_chrY_T0001092;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001092:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342230	10342315	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001092;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001092;transcript_name=HG002_chrY_T0001092;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001092:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342316	10342426	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001092;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001092;transcript_name=HG002_chrY_T0001092;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001092:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342427	10345455	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001092;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001092;transcript_name=HG002_chrY_T0001092;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001092:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10345456	10345564	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001092;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001092;transcript_name=HG002_chrY_T0001092;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001092:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10345565	10349334	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001092;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001092;transcript_name=HG002_chrY_T0001092;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001092:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10349335	10349512	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001092;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001092;transcript_name=HG002_chrY_T0001092;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001092:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10349513	10353033	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001092;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001092;transcript_name=HG002_chrY_T0001092;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001092:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10353034	10353133	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001092;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001092;transcript_name=HG002_chrY_T0001092;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001092:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10353134	10354068	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001092;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001092;transcript_name=HG002_chrY_T0001092;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001092:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10354069	10354225	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001092;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001092;transcript_name=HG002_chrY_T0001092;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001092:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10341152	10354230	1000	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001093;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_G0000354;transcript_name=HG002_chrY_T0001093;gene_name=ENSG00000290344;ID=HG002_chrY_T0001093;Name=ENSG00000290344
HG002_chrY	CAT	exon	10341152	10341539	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001093;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001093;transcript_name=HG002_chrY_T0001093;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001093:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10341540	10342140	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001093;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001093;transcript_name=HG002_chrY_T0001093;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001093:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342141	10342229	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001093;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001093;transcript_name=HG002_chrY_T0001093;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001093:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342230	10342315	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001093;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001093;transcript_name=HG002_chrY_T0001093;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001093:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342316	10342426	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001093;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001093;transcript_name=HG002_chrY_T0001093;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001093:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342427	10345455	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001093;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001093;transcript_name=HG002_chrY_T0001093;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001093:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10345456	10345564	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001093;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001093;transcript_name=HG002_chrY_T0001093;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001093:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10345565	10349334	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001093;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001093;transcript_name=HG002_chrY_T0001093;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001093:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10349335	10349512	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001093;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001093;transcript_name=HG002_chrY_T0001093;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001093:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10349513	10354068	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001093;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001093;transcript_name=HG002_chrY_T0001093;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001093:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10354069	10354230	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001093;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001093;transcript_name=HG002_chrY_T0001093;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001093:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10341152	10354248	1000	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001094;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_G0000354;transcript_name=HG002_chrY_T0001094;gene_name=ENSG00000290344;ID=HG002_chrY_T0001094;Name=ENSG00000290344
HG002_chrY	CAT	exon	10341152	10341539	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001094;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001094;transcript_name=HG002_chrY_T0001094;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001094:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10341540	10342140	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001094;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001094;transcript_name=HG002_chrY_T0001094;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001094:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342141	10342229	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001094;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001094;transcript_name=HG002_chrY_T0001094;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001094:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342230	10342315	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001094;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001094;transcript_name=HG002_chrY_T0001094;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001094:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342316	10342426	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001094;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001094;transcript_name=HG002_chrY_T0001094;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001094:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342427	10345455	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001094;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001094;transcript_name=HG002_chrY_T0001094;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001094:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10345456	10345564	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001094;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001094;transcript_name=HG002_chrY_T0001094;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001094:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10345565	10349334	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001094;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001094;transcript_name=HG002_chrY_T0001094;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001094:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10349335	10349512	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001094;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001094;transcript_name=HG002_chrY_T0001094;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001094:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10349513	10353033	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001094;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001094;transcript_name=HG002_chrY_T0001094;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001094:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10353034	10353133	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001094;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001094;transcript_name=HG002_chrY_T0001094;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001094:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10353134	10354099	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001094;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001094;transcript_name=HG002_chrY_T0001094;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001094:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10354100	10354248	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001094;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001094;transcript_name=HG002_chrY_T0001094;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001094:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10341152	10354230	1000	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001095;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_G0000354;transcript_name=HG002_chrY_T0001095;gene_name=ENSG00000290344;ID=HG002_chrY_T0001095;Name=ENSG00000290344
HG002_chrY	CAT	exon	10341152	10341539	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001095;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001095;transcript_name=HG002_chrY_T0001095;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001095:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10341540	10342140	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001095;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001095;transcript_name=HG002_chrY_T0001095;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001095:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342141	10342229	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001095;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001095;transcript_name=HG002_chrY_T0001095;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001095:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342230	10342315	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001095;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001095;transcript_name=HG002_chrY_T0001095;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001095:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342316	10342426	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001095;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001095;transcript_name=HG002_chrY_T0001095;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001095:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342427	10345455	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001095;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001095;transcript_name=HG002_chrY_T0001095;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001095:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10345456	10345564	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001095;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001095;transcript_name=HG002_chrY_T0001095;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001095:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10345565	10353033	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001095;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001095;transcript_name=HG002_chrY_T0001095;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001095:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10353034	10353133	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001095;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001095;transcript_name=HG002_chrY_T0001095;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001095:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10353134	10354099	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001095;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001095;transcript_name=HG002_chrY_T0001095;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001095:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10354100	10354230	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001095;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001095;transcript_name=HG002_chrY_T0001095;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001095:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10341152	10354248	1000	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001096;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_G0000354;transcript_name=HG002_chrY_T0001096;gene_name=ENSG00000290344;ID=HG002_chrY_T0001096;Name=ENSG00000290344
HG002_chrY	CAT	exon	10341152	10341539	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001096;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001096;transcript_name=HG002_chrY_T0001096;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001096:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10341540	10342140	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001096;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001096;transcript_name=HG002_chrY_T0001096;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001096:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342141	10342229	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001096;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001096;transcript_name=HG002_chrY_T0001096;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001096:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342230	10342315	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001096;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001096;transcript_name=HG002_chrY_T0001096;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001096:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342316	10342426	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001096;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001096;transcript_name=HG002_chrY_T0001096;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001096:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342427	10345455	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001096;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001096;transcript_name=HG002_chrY_T0001096;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001096:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10345456	10345564	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001096;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001096;transcript_name=HG002_chrY_T0001096;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001096:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10345565	10354099	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001096;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001096;transcript_name=HG002_chrY_T0001096;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001096:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10354100	10354248	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001096;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001096;transcript_name=HG002_chrY_T0001096;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001096:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10341152	10354226	1000	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001097;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_G0000354;transcript_name=HG002_chrY_T0001097;gene_name=ENSG00000290344;ID=HG002_chrY_T0001097;Name=ENSG00000290344
HG002_chrY	CAT	exon	10341152	10341539	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001097;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001097;transcript_name=HG002_chrY_T0001097;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001097:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10341540	10342140	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001097;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001097;transcript_name=HG002_chrY_T0001097;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001097:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342141	10342229	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001097;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001097;transcript_name=HG002_chrY_T0001097;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001097:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342230	10342315	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001097;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001097;transcript_name=HG002_chrY_T0001097;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001097:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342316	10342426	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001097;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001097;transcript_name=HG002_chrY_T0001097;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001097:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342427	10345455	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001097;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001097;transcript_name=HG002_chrY_T0001097;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001097:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10345456	10345564	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001097;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001097;transcript_name=HG002_chrY_T0001097;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001097:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10345565	10349334	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001097;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001097;transcript_name=HG002_chrY_T0001097;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001097:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10349335	10349512	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001097;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001097;transcript_name=HG002_chrY_T0001097;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001097:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10349513	10352500	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001097;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001097;transcript_name=HG002_chrY_T0001097;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001097:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10352501	10352601	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001097;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001097;transcript_name=HG002_chrY_T0001097;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001097:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10352602	10353033	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001097;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001097;transcript_name=HG002_chrY_T0001097;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001097:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10353034	10353133	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001097;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001097;transcript_name=HG002_chrY_T0001097;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001097:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10353134	10354099	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001097;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001097;transcript_name=HG002_chrY_T0001097;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001097:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10354100	10354226	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001097;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001097;transcript_name=HG002_chrY_T0001097;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001097:7;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10341333	10354209	1000	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001098;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_G0000354;transcript_name=HG002_chrY_T0001098;gene_name=ENSG00000290344;ID=HG002_chrY_T0001098;Name=ENSG00000290344
HG002_chrY	CAT	exon	10341333	10341539	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001098;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001098;transcript_name=HG002_chrY_T0001098;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001098:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10341540	10342140	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001098;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001098;transcript_name=HG002_chrY_T0001098;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001098:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342141	10342229	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001098;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001098;transcript_name=HG002_chrY_T0001098;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001098:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342230	10342315	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001098;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001098;transcript_name=HG002_chrY_T0001098;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001098:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342316	10342426	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001098;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001098;transcript_name=HG002_chrY_T0001098;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001098:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342427	10345455	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001098;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001098;transcript_name=HG002_chrY_T0001098;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001098:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10345456	10345564	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001098;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001098;transcript_name=HG002_chrY_T0001098;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001098:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10345565	10353033	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001098;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001098;transcript_name=HG002_chrY_T0001098;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001098:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10353034	10353133	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001098;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001098;transcript_name=HG002_chrY_T0001098;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001098:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10353134	10354068	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001098;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001098;transcript_name=HG002_chrY_T0001098;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001098:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10354069	10354209	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001098;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001098;transcript_name=HG002_chrY_T0001098;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001098:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10341917	10354230	1000	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001100;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_G0000354;transcript_name=HG002_chrY_T0001100;gene_name=ENSG00000290344;ID=HG002_chrY_T0001100;Name=ENSG00000290344
HG002_chrY	CAT	exon	10341917	10342229	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001100;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001100;transcript_name=HG002_chrY_T0001100;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001100:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342230	10342315	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001100;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001100;transcript_name=HG002_chrY_T0001100;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001100:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342316	10342426	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001100;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001100;transcript_name=HG002_chrY_T0001100;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001100:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342427	10345455	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001100;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001100;transcript_name=HG002_chrY_T0001100;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001100:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10345456	10345564	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001100;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001100;transcript_name=HG002_chrY_T0001100;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001100:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10345565	10349334	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001100;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001100;transcript_name=HG002_chrY_T0001100;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001100:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10349335	10349512	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001100;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001100;transcript_name=HG002_chrY_T0001100;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001100:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10349513	10352500	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001100;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001100;transcript_name=HG002_chrY_T0001100;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001100:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10352501	10352601	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001100;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001100;transcript_name=HG002_chrY_T0001100;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001100:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10352602	10353033	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001100;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001100;transcript_name=HG002_chrY_T0001100;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001100:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10353034	10353133	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001100;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001100;transcript_name=HG002_chrY_T0001100;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001100:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10353134	10354099	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001100;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001100;transcript_name=HG002_chrY_T0001100;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001100:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10354100	10354230	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001100;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001100;transcript_name=HG002_chrY_T0001100;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001100:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10348274	10354223	1000	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001101;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_G0000354;transcript_name=HG002_chrY_T0001101;gene_name=ENSG00000290344;ID=HG002_chrY_T0001101;Name=ENSG00000290344
HG002_chrY	CAT	exon	10348274	10348461	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001101;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001101;transcript_name=HG002_chrY_T0001101;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001101:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10348462	10349334	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001101;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001101;transcript_name=HG002_chrY_T0001101;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001101:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10349335	10349512	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001101;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001101;transcript_name=HG002_chrY_T0001101;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001101:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10349513	10352500	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001101;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001101;transcript_name=HG002_chrY_T0001101;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001101:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10352501	10352601	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001101;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001101;transcript_name=HG002_chrY_T0001101;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001101:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10352602	10353033	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001101;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001101;transcript_name=HG002_chrY_T0001101;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001101:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10353034	10353133	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001101;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001101;transcript_name=HG002_chrY_T0001101;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001101:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10353134	10354068	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001101;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001101;transcript_name=HG002_chrY_T0001101;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001101:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10354069	10354223	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001101;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001101;transcript_name=HG002_chrY_T0001101;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001101:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	10348801	10354213	1000	-	.	source_transcript=ENST00000787722.1;source_transcript_name=ENST00000787722;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787722.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001102;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_G0000354;transcript_name=HG002_chrY_T0001102;gene_name=ENSG00000290344;ID=HG002_chrY_T0001102;Name=ENSG00000290344
HG002_chrY	CAT	exon	10348801	10349512	.	-	.	source_transcript=ENST00000787722.1;source_transcript_name=ENST00000787722;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001102;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001102;transcript_name=HG002_chrY_T0001102;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001102:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10349513	10353033	.	-	.	source_transcript=ENST00000787722.1;source_transcript_name=ENST00000787722;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001102;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001102;transcript_name=HG002_chrY_T0001102;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001102:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10353034	10353133	.	-	.	source_transcript=ENST00000787722.1;source_transcript_name=ENST00000787722;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001102;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001102;transcript_name=HG002_chrY_T0001102;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001102:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10353134	10354068	.	-	.	source_transcript=ENST00000787722.1;source_transcript_name=ENST00000787722;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001102;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001102;transcript_name=HG002_chrY_T0001102;gene_name=ENSG00000290344;ID=intron:HG002_chrY_T0001102:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10354069	10354213	.	-	.	source_transcript=ENST00000787722.1;source_transcript_name=ENST00000787722;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG002_chrY_T0001102;gene_id=HG002_chrY_G0000354;Parent=HG002_chrY_T0001102;transcript_name=HG002_chrY_T0001102;gene_name=ENSG00000290344;ID=exon:HG002_chrY_T0001102:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	10341435	10353133	.	-	.	source_gene_common_name=RBMY2QP;source_gene=ENSG00000236718.5;gene_id=HG002_chrY_G0000355;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2QP;gene_sources=liftoff;ID=HG002_chrY_G0000355;Name=RBMY2QP
HG002_chrY	CAT	transcript	10341435	10353133	1000	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG002_chrY_T0001099;gene_id=HG002_chrY_G0000355;Parent=HG002_chrY_G0000355;transcript_name=HG002_chrY_T0001099;gene_name=RBMY2QP;ID=HG002_chrY_T0001099;Name=RBMY2QP
HG002_chrY	CAT	exon	10341435	10341735	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG002_chrY_T0001099;gene_id=HG002_chrY_G0000355;Parent=HG002_chrY_T0001099;transcript_name=HG002_chrY_T0001099;gene_name=RBMY2QP;ID=exon:HG002_chrY_T0001099:0;Name=RBMY2QP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10341736	10342140	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG002_chrY_T0001099;gene_id=HG002_chrY_G0000355;Parent=HG002_chrY_T0001099;transcript_name=HG002_chrY_T0001099;gene_name=RBMY2QP;ID=intron:HG002_chrY_T0001099:0;Name=RBMY2QP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342141	10342229	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG002_chrY_T0001099;gene_id=HG002_chrY_G0000355;Parent=HG002_chrY_T0001099;transcript_name=HG002_chrY_T0001099;gene_name=RBMY2QP;ID=exon:HG002_chrY_T0001099:1;Name=RBMY2QP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342230	10342315	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG002_chrY_T0001099;gene_id=HG002_chrY_G0000355;Parent=HG002_chrY_T0001099;transcript_name=HG002_chrY_T0001099;gene_name=RBMY2QP;ID=intron:HG002_chrY_T0001099:1;Name=RBMY2QP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10342316	10342426	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG002_chrY_T0001099;gene_id=HG002_chrY_G0000355;Parent=HG002_chrY_T0001099;transcript_name=HG002_chrY_T0001099;gene_name=RBMY2QP;ID=exon:HG002_chrY_T0001099:2;Name=RBMY2QP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10342427	10343302	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG002_chrY_T0001099;gene_id=HG002_chrY_G0000355;Parent=HG002_chrY_T0001099;transcript_name=HG002_chrY_T0001099;gene_name=RBMY2QP;ID=intron:HG002_chrY_T0001099:2;Name=RBMY2QP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10343303	10343417	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG002_chrY_T0001099;gene_id=HG002_chrY_G0000355;Parent=HG002_chrY_T0001099;transcript_name=HG002_chrY_T0001099;gene_name=RBMY2QP;ID=exon:HG002_chrY_T0001099:3;Name=RBMY2QP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10343418	10345455	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG002_chrY_T0001099;gene_id=HG002_chrY_G0000355;Parent=HG002_chrY_T0001099;transcript_name=HG002_chrY_T0001099;gene_name=RBMY2QP;ID=intron:HG002_chrY_T0001099:3;Name=RBMY2QP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10345456	10345607	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG002_chrY_T0001099;gene_id=HG002_chrY_G0000355;Parent=HG002_chrY_T0001099;transcript_name=HG002_chrY_T0001099;gene_name=RBMY2QP;ID=exon:HG002_chrY_T0001099:4;Name=RBMY2QP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10345608	10349334	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG002_chrY_T0001099;gene_id=HG002_chrY_G0000355;Parent=HG002_chrY_T0001099;transcript_name=HG002_chrY_T0001099;gene_name=RBMY2QP;ID=intron:HG002_chrY_T0001099:4;Name=RBMY2QP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10349335	10349512	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG002_chrY_T0001099;gene_id=HG002_chrY_G0000355;Parent=HG002_chrY_T0001099;transcript_name=HG002_chrY_T0001099;gene_name=RBMY2QP;ID=exon:HG002_chrY_T0001099:5;Name=RBMY2QP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10349513	10352500	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG002_chrY_T0001099;gene_id=HG002_chrY_G0000355;Parent=HG002_chrY_T0001099;transcript_name=HG002_chrY_T0001099;gene_name=RBMY2QP;ID=intron:HG002_chrY_T0001099:5;Name=RBMY2QP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10352501	10352601	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG002_chrY_T0001099;gene_id=HG002_chrY_G0000355;Parent=HG002_chrY_T0001099;transcript_name=HG002_chrY_T0001099;gene_name=RBMY2QP;ID=exon:HG002_chrY_T0001099:6;Name=RBMY2QP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10352602	10353033	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG002_chrY_T0001099;gene_id=HG002_chrY_G0000355;Parent=HG002_chrY_T0001099;transcript_name=HG002_chrY_T0001099;gene_name=RBMY2QP;ID=intron:HG002_chrY_T0001099:6;Name=RBMY2QP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10353034	10353133	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG002_chrY_T0001099;gene_id=HG002_chrY_G0000355;Parent=HG002_chrY_T0001099;transcript_name=HG002_chrY_T0001099;gene_name=RBMY2QP;ID=exon:HG002_chrY_T0001099:7;Name=RBMY2QP;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	10355141	10357321	.	+	.	source_gene_common_name=TSPY20P;source_gene=ENSG00000243643.1;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;gene_id=HG002_chrY_G0000356;gene_biotype=unprocessed_pseudogene;gene_name=TSPY20P;gene_sources=liftoff;ID=HG002_chrY_G0000356;Name=TSPY20P
HG002_chrY	CAT	transcript	10355141	10357321	1000	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;transcript_id=HG002_chrY_T0001103;gene_id=HG002_chrY_G0000356;Parent=HG002_chrY_G0000356;transcript_name=HG002_chrY_T0001103;gene_name=TSPY20P;ID=HG002_chrY_T0001103;Name=TSPY20P
HG002_chrY	CAT	exon	10355141	10355498	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;transcript_id=HG002_chrY_T0001103;gene_id=HG002_chrY_G0000356;Parent=HG002_chrY_T0001103;transcript_name=HG002_chrY_T0001103;gene_name=TSPY20P;ID=exon:HG002_chrY_T0001103:0;Name=TSPY20P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10355499	10356844	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;transcript_id=HG002_chrY_T0001103;gene_id=HG002_chrY_G0000356;Parent=HG002_chrY_T0001103;transcript_name=HG002_chrY_T0001103;gene_name=TSPY20P;ID=intron:HG002_chrY_T0001103:0;Name=TSPY20P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10356845	10356913	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;transcript_id=HG002_chrY_T0001103;gene_id=HG002_chrY_G0000356;Parent=HG002_chrY_T0001103;transcript_name=HG002_chrY_T0001103;gene_name=TSPY20P;ID=exon:HG002_chrY_T0001103:1;Name=TSPY20P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10356914	10357008	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;transcript_id=HG002_chrY_T0001103;gene_id=HG002_chrY_G0000356;Parent=HG002_chrY_T0001103;transcript_name=HG002_chrY_T0001103;gene_name=TSPY20P;ID=intron:HG002_chrY_T0001103:1;Name=TSPY20P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10357009	10357154	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;transcript_id=HG002_chrY_T0001103;gene_id=HG002_chrY_G0000356;Parent=HG002_chrY_T0001103;transcript_name=HG002_chrY_T0001103;gene_name=TSPY20P;ID=exon:HG002_chrY_T0001103:2;Name=TSPY20P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10357155	10357264	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;transcript_id=HG002_chrY_T0001103;gene_id=HG002_chrY_G0000356;Parent=HG002_chrY_T0001103;transcript_name=HG002_chrY_T0001103;gene_name=TSPY20P;ID=intron:HG002_chrY_T0001103:2;Name=TSPY20P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10357265	10357321	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;transcript_id=HG002_chrY_T0001103;gene_id=HG002_chrY_G0000356;Parent=HG002_chrY_T0001103;transcript_name=HG002_chrY_T0001103;gene_name=TSPY20P;ID=exon:HG002_chrY_T0001103:3;Name=TSPY20P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	10385503	10386335	.	-	.	source_gene_common_name=ENSG00000290378;source_gene=ENSG00000290378.1;gene_id=HG002_chrY_G0000357;gene_biotype=lncRNA;gene_name=ENSG00000290378;gene_sources=liftoff;ID=HG002_chrY_G0000357;Name=ENSG00000290378
HG002_chrY	CAT	transcript	10385503	10386335	1000	-	.	source_transcript=ENST00000456541.1;source_transcript_name=ENST00000456541;source_gene=ENSG00000290378.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290378.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456541.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456541.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290378;transcript_id=HG002_chrY_T0001104;gene_id=HG002_chrY_G0000357;Parent=HG002_chrY_G0000357;transcript_name=HG002_chrY_T0001104;gene_name=ENSG00000290378;ID=HG002_chrY_T0001104;Name=ENSG00000290378
HG002_chrY	CAT	exon	10385503	10385558	.	-	.	source_transcript=ENST00000456541.1;source_transcript_name=ENST00000456541;source_gene=ENSG00000290378.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290378.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456541.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290378;transcript_id=HG002_chrY_T0001104;gene_id=HG002_chrY_G0000357;Parent=HG002_chrY_T0001104;transcript_name=HG002_chrY_T0001104;gene_name=ENSG00000290378;ID=exon:HG002_chrY_T0001104:0;Name=ENSG00000290378;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10385559	10386249	.	-	.	source_transcript=ENST00000456541.1;source_transcript_name=ENST00000456541;source_gene=ENSG00000290378.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290378.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456541.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290378;transcript_id=HG002_chrY_T0001104;gene_id=HG002_chrY_G0000357;Parent=HG002_chrY_T0001104;transcript_name=HG002_chrY_T0001104;gene_name=ENSG00000290378;ID=intron:HG002_chrY_T0001104:0;Name=ENSG00000290378;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10386250	10386335	.	-	.	source_transcript=ENST00000456541.1;source_transcript_name=ENST00000456541;source_gene=ENSG00000290378.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290378.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456541.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290378;transcript_id=HG002_chrY_T0001104;gene_id=HG002_chrY_G0000357;Parent=HG002_chrY_T0001104;transcript_name=HG002_chrY_T0001104;gene_name=ENSG00000290378;ID=exon:HG002_chrY_T0001104:1;Name=ENSG00000290378;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	10385536	10388112	.	-	.	source_gene_common_name=TSPY5P;source_gene=ENSG00000225685.2;gene_id=HG002_chrY_G0000358;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY5P;gene_sources=liftoff;ID=HG002_chrY_G0000358;Name=TSPY5P
HG002_chrY	CAT	transcript	10385536	10388112	1000	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG002_chrY_T0001105;gene_id=HG002_chrY_G0000358;Parent=HG002_chrY_G0000358;transcript_name=HG002_chrY_T0001105;gene_name=TSPY5P;ID=HG002_chrY_T0001105;Name=TSPY5P
HG002_chrY	CAT	exon	10385536	10385558	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG002_chrY_T0001105;gene_id=HG002_chrY_G0000358;Parent=HG002_chrY_T0001105;transcript_name=HG002_chrY_T0001105;gene_name=TSPY5P;ID=exon:HG002_chrY_T0001105:0;Name=TSPY5P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10385559	10386249	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG002_chrY_T0001105;gene_id=HG002_chrY_G0000358;Parent=HG002_chrY_T0001105;transcript_name=HG002_chrY_T0001105;gene_name=TSPY5P;ID=intron:HG002_chrY_T0001105:0;Name=TSPY5P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10386250	10386331	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG002_chrY_T0001105;gene_id=HG002_chrY_G0000358;Parent=HG002_chrY_T0001105;transcript_name=HG002_chrY_T0001105;gene_name=TSPY5P;ID=exon:HG002_chrY_T0001105:1;Name=TSPY5P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10386332	10386437	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG002_chrY_T0001105;gene_id=HG002_chrY_G0000358;Parent=HG002_chrY_T0001105;transcript_name=HG002_chrY_T0001105;gene_name=TSPY5P;ID=intron:HG002_chrY_T0001105:1;Name=TSPY5P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10386438	10386583	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG002_chrY_T0001105;gene_id=HG002_chrY_G0000358;Parent=HG002_chrY_T0001105;transcript_name=HG002_chrY_T0001105;gene_name=TSPY5P;ID=exon:HG002_chrY_T0001105:2;Name=TSPY5P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10386584	10386680	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG002_chrY_T0001105;gene_id=HG002_chrY_G0000358;Parent=HG002_chrY_T0001105;transcript_name=HG002_chrY_T0001105;gene_name=TSPY5P;ID=intron:HG002_chrY_T0001105:2;Name=TSPY5P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10386681	10386792	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG002_chrY_T0001105;gene_id=HG002_chrY_G0000358;Parent=HG002_chrY_T0001105;transcript_name=HG002_chrY_T0001105;gene_name=TSPY5P;ID=exon:HG002_chrY_T0001105:3;Name=TSPY5P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10386793	10386920	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG002_chrY_T0001105;gene_id=HG002_chrY_G0000358;Parent=HG002_chrY_T0001105;transcript_name=HG002_chrY_T0001105;gene_name=TSPY5P;ID=intron:HG002_chrY_T0001105:3;Name=TSPY5P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10386921	10386998	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG002_chrY_T0001105;gene_id=HG002_chrY_G0000358;Parent=HG002_chrY_T0001105;transcript_name=HG002_chrY_T0001105;gene_name=TSPY5P;ID=exon:HG002_chrY_T0001105:4;Name=TSPY5P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	10386999	10387605	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG002_chrY_T0001105;gene_id=HG002_chrY_G0000358;Parent=HG002_chrY_T0001105;transcript_name=HG002_chrY_T0001105;gene_name=TSPY5P;ID=intron:HG002_chrY_T0001105:4;Name=TSPY5P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	10387606	10388112	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG002_chrY_T0001105;gene_id=HG002_chrY_G0000358;Parent=HG002_chrY_T0001105;transcript_name=HG002_chrY_T0001105;gene_name=TSPY5P;ID=exon:HG002_chrY_T0001105:5;Name=TSPY5P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	10389092	10389370	.	+	.	source_gene_common_name=ENSG00000278478;source_gene=ENSG00000278478.1;alternative_source_transcripts=ENST00000430032.3,ENST00000430032.3;gene_id=HG002_chrY_G0000359;gene_biotype=processed_pseudogene;gene_name=ENSG00000278478;gene_sources=liftoff;ID=HG002_chrY_G0000359;Name=ENSG00000278478
HG002_chrY	CAT	transcript	10389092	10389370	1000	+	.	source_transcript=ENST00000430032.3;source_transcript_name=ENST00000430032;source_gene=ENSG00000278478.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278478.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430032.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000430032.3;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278478;alternative_source_transcripts=ENST00000430032.3,ENST00000430032.3;transcript_id=HG002_chrY_T0001106;gene_id=HG002_chrY_G0000359;Parent=HG002_chrY_G0000359;transcript_name=HG002_chrY_T0001106;gene_name=ENSG00000278478;ID=HG002_chrY_T0001106;Name=ENSG00000278478
HG002_chrY	CAT	exon	10389092	10389370	.	+	.	source_transcript=ENST00000430032.3;source_transcript_name=ENST00000430032;source_gene=ENSG00000278478.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278478.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430032.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000430032.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278478;alternative_source_transcripts=ENST00000430032.3,ENST00000430032.3;transcript_id=HG002_chrY_T0001106;gene_id=HG002_chrY_G0000359;Parent=HG002_chrY_T0001106;transcript_name=HG002_chrY_T0001106;gene_name=ENSG00000278478;ID=exon:HG002_chrY_T0001106:0;Name=ENSG00000278478;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	10409371	10409489	.	-	.	source_gene_common_name=RNA5SP518;source_gene=ENSG00000251766.1;alternative_source_transcripts=ENST00000515957.1,ENST00000515957.1;gene_id=HG002_chrY_G0000360;gene_biotype=rRNA_pseudogene;gene_name=RNA5SP518;gene_sources=liftoff;ID=HG002_chrY_G0000360;Name=RNA5SP518
HG002_chrY	CAT	transcript	10409371	10409489	1000	-	.	source_transcript=ENST00000515957.1;source_transcript_name=RNA5SP518-201;source_gene=ENSG00000251766.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000251766.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000515957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515957.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP518;alternative_source_transcripts=ENST00000515957.1,ENST00000515957.1;transcript_id=HG002_chrY_T0001107;gene_id=HG002_chrY_G0000360;Parent=HG002_chrY_G0000360;transcript_name=HG002_chrY_T0001107;gene_name=RNA5SP518;ID=HG002_chrY_T0001107;Name=RNA5SP518
HG002_chrY	CAT	exon	10409371	10409489	.	-	.	source_transcript=ENST00000515957.1;source_transcript_name=RNA5SP518-201;source_gene=ENSG00000251766.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000251766.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000515957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515957.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP518;alternative_source_transcripts=ENST00000515957.1,ENST00000515957.1;transcript_id=HG002_chrY_T0001107;gene_id=HG002_chrY_G0000360;Parent=HG002_chrY_T0001107;transcript_name=HG002_chrY_T0001107;gene_name=RNA5SP518;ID=exon:HG002_chrY_T0001107:0;Name=RNA5SP518;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	10411836	10411954	.	-	.	source_gene_common_name=RNA5SP519;source_gene=ENSG00000252289.1;alternative_source_transcripts=ENST00000516480.1,ENST00000516480.1;gene_id=HG002_chrY_G0000361;gene_biotype=rRNA_pseudogene;gene_name=RNA5SP519;gene_sources=liftoff;ID=HG002_chrY_G0000361;Name=RNA5SP519
HG002_chrY	CAT	transcript	10411836	10411954	1000	-	.	source_transcript=ENST00000516480.1;source_transcript_name=RNA5SP519-201;source_gene=ENSG00000252289.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252289.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516480.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP519;alternative_source_transcripts=ENST00000516480.1,ENST00000516480.1;transcript_id=HG002_chrY_T0001108;gene_id=HG002_chrY_G0000361;Parent=HG002_chrY_G0000361;transcript_name=HG002_chrY_T0001108;gene_name=RNA5SP519;ID=HG002_chrY_T0001108;Name=RNA5SP519
HG002_chrY	CAT	exon	10411836	10411954	.	-	.	source_transcript=ENST00000516480.1;source_transcript_name=RNA5SP519-201;source_gene=ENSG00000252289.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252289.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516480.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP519;alternative_source_transcripts=ENST00000516480.1,ENST00000516480.1;transcript_id=HG002_chrY_T0001108;gene_id=HG002_chrY_G0000361;Parent=HG002_chrY_T0001108;transcript_name=HG002_chrY_T0001108;gene_name=RNA5SP519;ID=exon:HG002_chrY_T0001108:0;Name=RNA5SP519;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	10490548	10491683	.	-	.	source_gene_common_name=DUX4L31;source_gene=ENSG00000231411.1;alternative_source_transcripts=ENST00000446466.1,ENST00000446466.1;gene_id=HG002_chrY_G0000362;gene_biotype=unprocessed_pseudogene;gene_name=DUX4L31;gene_sources=liftoff;ID=HG002_chrY_G0000362;Name=DUX4L31
HG002_chrY	CAT	transcript	10490548	10491683	1000	-	.	source_transcript=ENST00000446466.1;source_transcript_name=DUX4L31-201;source_gene=ENSG00000231411.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231411.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000446466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446466.1;transcript_score=199.912;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L31;alternative_source_transcripts=ENST00000446466.1,ENST00000446466.1;transcript_id=HG002_chrY_T0001109;gene_id=HG002_chrY_G0000362;Parent=HG002_chrY_G0000362;transcript_name=HG002_chrY_T0001109;gene_name=DUX4L31;ID=HG002_chrY_T0001109;Name=DUX4L31
HG002_chrY	CAT	exon	10490548	10491683	.	-	.	source_transcript=ENST00000446466.1;source_transcript_name=DUX4L31-201;source_gene=ENSG00000231411.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231411.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000446466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446466.1;transcript_score=199.912;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L31;alternative_source_transcripts=ENST00000446466.1,ENST00000446466.1;transcript_id=HG002_chrY_T0001109;gene_id=HG002_chrY_G0000362;Parent=HG002_chrY_T0001109;transcript_name=HG002_chrY_T0001109;gene_name=DUX4L31;ID=exon:HG002_chrY_T0001109:0;Name=DUX4L31;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	10492811	10493165	.	+	.	source_gene_common_name=PCMTD1P1;source_gene=ENSG00000226061.1;alternative_source_transcripts=ENST00000455560.1,ENST00000455560.1;gene_id=HG002_chrY_G0000363;gene_biotype=unprocessed_pseudogene;gene_name=PCMTD1P1;gene_sources=liftoff;ID=HG002_chrY_G0000363;Name=PCMTD1P1
HG002_chrY	CAT	transcript	10492811	10493165	1000	+	.	source_transcript=ENST00000455560.1;source_transcript_name=PCMTD1P1-201;source_gene=ENSG00000226061.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226061.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455560.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455560.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCMTD1P1;alternative_source_transcripts=ENST00000455560.1,ENST00000455560.1;transcript_id=HG002_chrY_T0001110;gene_id=HG002_chrY_G0000363;Parent=HG002_chrY_G0000363;transcript_name=HG002_chrY_T0001110;gene_name=PCMTD1P1;ID=HG002_chrY_T0001110;Name=PCMTD1P1
HG002_chrY	CAT	exon	10492811	10493165	.	+	.	source_transcript=ENST00000455560.1;source_transcript_name=PCMTD1P1-201;source_gene=ENSG00000226061.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226061.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455560.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455560.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCMTD1P1;alternative_source_transcripts=ENST00000455560.1,ENST00000455560.1;transcript_id=HG002_chrY_T0001110;gene_id=HG002_chrY_G0000363;Parent=HG002_chrY_T0001110;transcript_name=HG002_chrY_T0001110;gene_name=PCMTD1P1;ID=exon:HG002_chrY_T0001110:0;Name=PCMTD1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	10509348	10511269	.	-	.	source_gene_common_name=CDC27P2;source_gene=ENSG00000237447.1;alternative_source_transcripts=ENST00000425026.1,ENST00000425026.1;gene_id=HG002_chrY_G0000364;gene_biotype=processed_pseudogene;gene_name=CDC27P2;gene_sources=liftoff;ID=HG002_chrY_G0000364;Name=CDC27P2
HG002_chrY	CAT	transcript	10509348	10511269	1000	-	.	source_transcript=ENST00000425026.1;source_transcript_name=CDC27P2-201;source_gene=ENSG00000237447.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237447.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425026.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDC27P2;alternative_source_transcripts=ENST00000425026.1,ENST00000425026.1;transcript_id=HG002_chrY_T0001111;gene_id=HG002_chrY_G0000364;Parent=HG002_chrY_G0000364;transcript_name=HG002_chrY_T0001111;gene_name=CDC27P2;ID=HG002_chrY_T0001111;Name=CDC27P2
HG002_chrY	CAT	exon	10509348	10511269	.	-	.	source_transcript=ENST00000425026.1;source_transcript_name=CDC27P2-201;source_gene=ENSG00000237447.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237447.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425026.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDC27P2;alternative_source_transcripts=ENST00000425026.1,ENST00000425026.1;transcript_id=HG002_chrY_T0001111;gene_id=HG002_chrY_G0000364;Parent=HG002_chrY_T0001111;transcript_name=HG002_chrY_T0001111;gene_name=CDC27P2;ID=exon:HG002_chrY_T0001111:0;Name=CDC27P2;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	10516227	10518074	.	-	.	source_gene_common_name=ENSG00000225840;source_gene=ENSG00000225840.2;alternative_source_transcripts=ENST00000445125.2;gene_id=HG002_chrY_G0000365;gene_biotype=processed_pseudogene;gene_name=ENSG00000225840;gene_sources=liftoff;ID=HG002_chrY_G0000365;Name=ENSG00000225840
HG002_chrY	CAT	transcript	10516227	10518074	1000	-	.	source_transcript=ENST00000445125.2;source_transcript_name=ENST00000445125;source_gene=ENSG00000225840.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225840.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445125.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445125.2;transcript_score=199.946;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000225840;alternative_source_transcripts=ENST00000445125.2;transcript_id=HG002_chrY_T0001112;gene_id=HG002_chrY_G0000365;Parent=HG002_chrY_G0000365;transcript_name=HG002_chrY_T0001112;gene_name=ENSG00000225840;ID=HG002_chrY_T0001112;Name=ENSG00000225840
HG002_chrY	CAT	exon	10516227	10518074	.	-	.	source_transcript=ENST00000445125.2;source_transcript_name=ENST00000445125;source_gene=ENSG00000225840.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225840.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445125.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445125.2;transcript_score=199.946;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000225840;alternative_source_transcripts=ENST00000445125.2;transcript_id=HG002_chrY_T0001112;gene_id=HG002_chrY_G0000365;Parent=HG002_chrY_T0001112;transcript_name=HG002_chrY_T0001112;gene_name=ENSG00000225840;ID=exon:HG002_chrY_T0001112:0;Name=ENSG00000225840;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	10519126	10519277	.	+	.	source_gene_common_name=RNA5-8SP6;source_gene=ENSG00000251705.1;alternative_source_transcripts=ENST00000515896.1;gene_id=HG002_chrY_G0000366;gene_biotype=rRNA_pseudogene;gene_name=RNA5-8SP6;gene_sources=liftoff;ID=HG002_chrY_G0000366;Name=RNA5-8SP6
HG002_chrY	CAT	transcript	10519126	10519277	1000	+	.	source_transcript=ENST00000515896.1;source_transcript_name=RNA5-8SP6-201;source_gene=ENSG00000251705.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000251705.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000515896.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515896.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5-8SP6;alternative_source_transcripts=ENST00000515896.1;transcript_id=HG002_chrY_T0001113;gene_id=HG002_chrY_G0000366;Parent=HG002_chrY_G0000366;transcript_name=HG002_chrY_T0001113;gene_name=RNA5-8SP6;ID=HG002_chrY_T0001113;Name=RNA5-8SP6
HG002_chrY	CAT	exon	10519126	10519277	.	+	.	source_transcript=ENST00000515896.1;source_transcript_name=RNA5-8SP6-201;source_gene=ENSG00000251705.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000251705.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000515896.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515896.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5-8SP6;alternative_source_transcripts=ENST00000515896.1;transcript_id=HG002_chrY_T0001113;gene_id=HG002_chrY_G0000366;Parent=HG002_chrY_T0001113;transcript_name=HG002_chrY_T0001113;gene_name=RNA5-8SP6;ID=exon:HG002_chrY_T0001113:0;Name=RNA5-8SP6;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	11263542	11263763	.	-	.	source_gene_common_name=ENSG00000273858;source_gene=ENSG00000273858.1;alternative_source_transcripts=ENST00000622087.1,ENST00000622087.1;gene_id=HG002_chrY_G0000367;gene_biotype=processed_pseudogene;gene_name=ENSG00000273858;gene_sources=liftoff;ID=HG002_chrY_G0000367;Name=ENSG00000273858
HG002_chrY	CAT	transcript	11263542	11263763	1000	-	.	source_transcript=ENST00000622087.1;source_transcript_name=ENST00000622087;source_gene=ENSG00000273858.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273858.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000622087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622087.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273858;alternative_source_transcripts=ENST00000622087.1,ENST00000622087.1;transcript_id=HG002_chrY_T0001114;gene_id=HG002_chrY_G0000367;Parent=HG002_chrY_G0000367;transcript_name=HG002_chrY_T0001114;gene_name=ENSG00000273858;ID=HG002_chrY_T0001114;Name=ENSG00000273858
HG002_chrY	CAT	exon	11263542	11263763	.	-	.	source_transcript=ENST00000622087.1;source_transcript_name=ENST00000622087;source_gene=ENSG00000273858.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273858.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000622087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622087.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273858;alternative_source_transcripts=ENST00000622087.1,ENST00000622087.1;transcript_id=HG002_chrY_T0001114;gene_id=HG002_chrY_G0000367;Parent=HG002_chrY_T0001114;transcript_name=HG002_chrY_T0001114;gene_name=ENSG00000273858;ID=exon:HG002_chrY_T0001114:0;Name=ENSG00000273858;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	11306701	11307286	.	-	.	source_gene_common_name=CDRT15P10;source_gene=ENSG00000273693.1;alternative_source_transcripts=ENST00000618128.1,ENST00000618128.1;gene_id=HG002_chrY_G0000368;gene_biotype=processed_pseudogene;gene_name=CDRT15P10;gene_sources=liftoff;ID=HG002_chrY_G0000368;Name=CDRT15P10
HG002_chrY	CAT	transcript	11306701	11307286	1000	-	.	source_transcript=ENST00000618128.1;source_transcript_name=CDRT15P10-201;source_gene=ENSG00000273693.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273693.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000618128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618128.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDRT15P10;alternative_source_transcripts=ENST00000618128.1,ENST00000618128.1;transcript_id=HG002_chrY_T0001115;gene_id=HG002_chrY_G0000368;Parent=HG002_chrY_G0000368;transcript_name=HG002_chrY_T0001115;gene_name=CDRT15P10;ID=HG002_chrY_T0001115;Name=CDRT15P10
HG002_chrY	CAT	exon	11306701	11307286	.	-	.	source_transcript=ENST00000618128.1;source_transcript_name=CDRT15P10-201;source_gene=ENSG00000273693.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273693.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000618128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618128.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDRT15P10;alternative_source_transcripts=ENST00000618128.1,ENST00000618128.1;transcript_id=HG002_chrY_T0001115;gene_id=HG002_chrY_G0000368;Parent=HG002_chrY_T0001115;transcript_name=HG002_chrY_T0001115;gene_name=CDRT15P10;ID=exon:HG002_chrY_T0001115:0;Name=CDRT15P10;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	11328288	11328486	.	-	.	source_gene_common_name=ENSG00000271365;source_gene=ENSG00000271365.1;alternative_source_transcripts=ENST00000605663.1,ENST00000605663.1;gene_id=HG002_chrY_G0000369;gene_biotype=processed_pseudogene;gene_name=ENSG00000271365;gene_sources=liftoff;ID=HG002_chrY_G0000369;Name=ENSG00000271365
HG002_chrY	CAT	transcript	11328288	11328486	1000	-	.	source_transcript=ENST00000605663.1;source_transcript_name=ENST00000605663;source_gene=ENSG00000271365.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271365.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000605663.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000605663.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271365;alternative_source_transcripts=ENST00000605663.1,ENST00000605663.1;transcript_id=HG002_chrY_T0001116;gene_id=HG002_chrY_G0000369;Parent=HG002_chrY_G0000369;transcript_name=HG002_chrY_T0001116;gene_name=ENSG00000271365;ID=HG002_chrY_T0001116;Name=ENSG00000271365
HG002_chrY	CAT	exon	11328288	11328486	.	-	.	source_transcript=ENST00000605663.1;source_transcript_name=ENST00000605663;source_gene=ENSG00000271365.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271365.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000605663.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000605663.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271365;alternative_source_transcripts=ENST00000605663.1,ENST00000605663.1;transcript_id=HG002_chrY_T0001116;gene_id=HG002_chrY_G0000369;Parent=HG002_chrY_T0001116;transcript_name=HG002_chrY_T0001116;gene_name=ENSG00000271365;ID=exon:HG002_chrY_T0001116:0;Name=ENSG00000271365;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	11328612	11328819	.	-	.	source_gene_common_name=ENSG00000271309;source_gene=ENSG00000271309.1;alternative_source_transcripts=ENST00000604370.1,ENST00000604370.1;gene_id=HG002_chrY_G0000370;gene_biotype=processed_pseudogene;gene_name=ENSG00000271309;gene_sources=liftoff;ID=HG002_chrY_G0000370;Name=ENSG00000271309
HG002_chrY	CAT	transcript	11328612	11328819	1000	-	.	source_transcript=ENST00000604370.1;source_transcript_name=ENST00000604370;source_gene=ENSG00000271309.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271309.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604370.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271309;alternative_source_transcripts=ENST00000604370.1,ENST00000604370.1;transcript_id=HG002_chrY_T0001117;gene_id=HG002_chrY_G0000370;Parent=HG002_chrY_G0000370;transcript_name=HG002_chrY_T0001117;gene_name=ENSG00000271309;ID=HG002_chrY_T0001117;Name=ENSG00000271309
HG002_chrY	CAT	exon	11328612	11328819	.	-	.	source_transcript=ENST00000604370.1;source_transcript_name=ENST00000604370;source_gene=ENSG00000271309.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271309.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604370.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271309;alternative_source_transcripts=ENST00000604370.1,ENST00000604370.1;transcript_id=HG002_chrY_T0001117;gene_id=HG002_chrY_G0000370;Parent=HG002_chrY_T0001117;transcript_name=HG002_chrY_T0001117;gene_name=ENSG00000271309;ID=exon:HG002_chrY_T0001117:0;Name=ENSG00000271309;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	11328942	11329110	.	-	.	source_gene_common_name=ENSG00000270570;source_gene=ENSG00000270570.1;alternative_source_transcripts=ENST00000603467.1,ENST00000603467.1;gene_id=HG002_chrY_G0000371;gene_biotype=processed_pseudogene;gene_name=ENSG00000270570;gene_sources=liftoff;ID=HG002_chrY_G0000371;Name=ENSG00000270570
HG002_chrY	CAT	transcript	11328942	11329110	1000	-	.	source_transcript=ENST00000603467.1;source_transcript_name=ENST00000603467;source_gene=ENSG00000270570.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270570.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000603467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000603467.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000270570;alternative_source_transcripts=ENST00000603467.1,ENST00000603467.1;transcript_id=HG002_chrY_T0001118;gene_id=HG002_chrY_G0000371;Parent=HG002_chrY_G0000371;transcript_name=HG002_chrY_T0001118;gene_name=ENSG00000270570;ID=HG002_chrY_T0001118;Name=ENSG00000270570
HG002_chrY	CAT	exon	11328942	11329110	.	-	.	source_transcript=ENST00000603467.1;source_transcript_name=ENST00000603467;source_gene=ENSG00000270570.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270570.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000603467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000603467.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000270570;alternative_source_transcripts=ENST00000603467.1,ENST00000603467.1;transcript_id=HG002_chrY_T0001118;gene_id=HG002_chrY_G0000371;Parent=HG002_chrY_T0001118;transcript_name=HG002_chrY_T0001118;gene_name=ENSG00000270570;ID=exon:HG002_chrY_T0001118:0;Name=ENSG00000270570;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	11337508	11436223	.	-	.	source_gene_common_name=ENSG00000291032;source_gene=ENSG00000291032.2;gene_id=HG002_chrY_G0000372;gene_biotype=lncRNA;gene_name=ENSG00000291032;gene_sources=liftoff;ID=HG002_chrY_G0000372;Name=ENSG00000291032
HG002_chrY	CAT	transcript	11337508	11436222	1000	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001119;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001119;gene_name=ENSG00000291032;ID=HG002_chrY_T0001119;Name=ENSG00000291032
HG002_chrY	CAT	exon	11337508	11337657	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001119;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001119;transcript_name=HG002_chrY_T0001119;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001119:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11337658	11364532	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001119;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001119;transcript_name=HG002_chrY_T0001119;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001119:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11364533	11364567	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001119;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001119;transcript_name=HG002_chrY_T0001119;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001119:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11364568	11433942	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001119;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001119;transcript_name=HG002_chrY_T0001119;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001119:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001119;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001119;transcript_name=HG002_chrY_T0001119;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001119:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11436136	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001119;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001119;transcript_name=HG002_chrY_T0001119;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001119:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436222	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001119;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001119;transcript_name=HG002_chrY_T0001119;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001119:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11345417	11436226	1000	-	.	source_transcript=ENST00000796784.1;source_transcript_name=ENST00000796784;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796784.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001120;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001120;gene_name=ENSG00000291032;ID=HG002_chrY_T0001120;Name=ENSG00000291032
HG002_chrY	CAT	exon	11345417	11345540	.	-	.	source_transcript=ENST00000796784.1;source_transcript_name=ENST00000796784;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001120;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001120;transcript_name=HG002_chrY_T0001120;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001120:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11345541	11433942	.	-	.	source_transcript=ENST00000796784.1;source_transcript_name=ENST00000796784;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001120;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001120;transcript_name=HG002_chrY_T0001120;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001120:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796784.1;source_transcript_name=ENST00000796784;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001120;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001120;transcript_name=HG002_chrY_T0001120;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001120:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11436136	.	-	.	source_transcript=ENST00000796784.1;source_transcript_name=ENST00000796784;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001120;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001120;transcript_name=HG002_chrY_T0001120;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001120:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436226	.	-	.	source_transcript=ENST00000796784.1;source_transcript_name=ENST00000796784;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001120;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001120;transcript_name=HG002_chrY_T0001120;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001120:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11348339	11436222	1000	-	.	source_transcript=ENST00000796785.1;source_transcript_name=ENST00000796785;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796785.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001121;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001121;gene_name=ENSG00000291032;ID=HG002_chrY_T0001121;Name=ENSG00000291032
HG002_chrY	CAT	exon	11348339	11348597	.	-	.	source_transcript=ENST00000796785.1;source_transcript_name=ENST00000796785;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001121;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001121;transcript_name=HG002_chrY_T0001121;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001121:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11348598	11433942	.	-	.	source_transcript=ENST00000796785.1;source_transcript_name=ENST00000796785;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001121;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001121;transcript_name=HG002_chrY_T0001121;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001121:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796785.1;source_transcript_name=ENST00000796785;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001121;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001121;transcript_name=HG002_chrY_T0001121;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001121:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11436136	.	-	.	source_transcript=ENST00000796785.1;source_transcript_name=ENST00000796785;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001121;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001121;transcript_name=HG002_chrY_T0001121;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001121:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436222	.	-	.	source_transcript=ENST00000796785.1;source_transcript_name=ENST00000796785;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001121;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001121;transcript_name=HG002_chrY_T0001121;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001121:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11348344	11434001	1000	-	.	source_transcript=ENST00000796786.1;source_transcript_name=ENST00000796786;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796786.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001122;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001122;gene_name=ENSG00000291032;ID=HG002_chrY_T0001122;Name=ENSG00000291032
HG002_chrY	CAT	exon	11348344	11348597	.	-	.	source_transcript=ENST00000796786.1;source_transcript_name=ENST00000796786;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001122;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001122;transcript_name=HG002_chrY_T0001122;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001122:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11348598	11364532	.	-	.	source_transcript=ENST00000796786.1;source_transcript_name=ENST00000796786;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001122;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001122;transcript_name=HG002_chrY_T0001122;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001122:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11364533	11364567	.	-	.	source_transcript=ENST00000796786.1;source_transcript_name=ENST00000796786;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001122;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001122;transcript_name=HG002_chrY_T0001122;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001122:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11364568	11433942	.	-	.	source_transcript=ENST00000796786.1;source_transcript_name=ENST00000796786;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001122;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001122;transcript_name=HG002_chrY_T0001122;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001122:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796786.1;source_transcript_name=ENST00000796786;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001122;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001122;transcript_name=HG002_chrY_T0001122;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001122:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11374991	11436225	1000	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001124;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001124;gene_name=ENSG00000291032;ID=HG002_chrY_T0001124;Name=ENSG00000291032
HG002_chrY	CAT	exon	11374991	11375299	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001124;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001124;transcript_name=HG002_chrY_T0001124;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001124:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11375300	11376852	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001124;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001124;transcript_name=HG002_chrY_T0001124;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001124:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11376853	11377083	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001124;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001124;transcript_name=HG002_chrY_T0001124;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001124:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11377084	11433942	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001124;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001124;transcript_name=HG002_chrY_T0001124;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001124:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001124;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001124;transcript_name=HG002_chrY_T0001124;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001124:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11436136	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001124;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001124;transcript_name=HG002_chrY_T0001124;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001124:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436225	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001124;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001124;transcript_name=HG002_chrY_T0001124;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001124:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11374991	11436222	1000	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001125;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001125;gene_name=ENSG00000291032;ID=HG002_chrY_T0001125;Name=ENSG00000291032
HG002_chrY	CAT	exon	11374991	11375269	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001125;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001125;transcript_name=HG002_chrY_T0001125;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001125:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11375270	11375793	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001125;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001125;transcript_name=HG002_chrY_T0001125;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001125:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11375794	11375814	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001125;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001125;transcript_name=HG002_chrY_T0001125;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001125:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11375815	11376852	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001125;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001125;transcript_name=HG002_chrY_T0001125;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001125:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11376853	11377083	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001125;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001125;transcript_name=HG002_chrY_T0001125;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001125:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11377084	11433942	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001125;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001125;transcript_name=HG002_chrY_T0001125;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001125:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001125;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001125;transcript_name=HG002_chrY_T0001125;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001125:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11436136	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001125;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001125;transcript_name=HG002_chrY_T0001125;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001125:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436222	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001125;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001125;transcript_name=HG002_chrY_T0001125;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001125:4;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11374996	11436198	1000	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001126;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001126;gene_name=ENSG00000291032;ID=HG002_chrY_T0001126;Name=ENSG00000291032
HG002_chrY	CAT	exon	11374996	11375299	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001126;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001126;transcript_name=HG002_chrY_T0001126;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001126:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11375300	11375793	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001126;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001126;transcript_name=HG002_chrY_T0001126;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001126:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11375794	11375981	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001126;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001126;transcript_name=HG002_chrY_T0001126;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001126:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11375982	11376084	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001126;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001126;transcript_name=HG002_chrY_T0001126;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001126:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11376085	11376362	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001126;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001126;transcript_name=HG002_chrY_T0001126;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001126:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11376363	11376852	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001126;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001126;transcript_name=HG002_chrY_T0001126;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001126:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11376853	11377083	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001126;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001126;transcript_name=HG002_chrY_T0001126;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001126:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11377084	11433942	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001126;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001126;transcript_name=HG002_chrY_T0001126;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001126:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001126;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001126;transcript_name=HG002_chrY_T0001126;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001126:4;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11436136	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001126;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001126;transcript_name=HG002_chrY_T0001126;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001126:4;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436198	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001126;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001126;transcript_name=HG002_chrY_T0001126;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001126:5;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11374996	11436175	1000	-	.	source_transcript=ENST00000796791.1;source_transcript_name=ENST00000796791;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796791.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001127;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001127;gene_name=ENSG00000291032;ID=HG002_chrY_T0001127;Name=ENSG00000291032
HG002_chrY	CAT	exon	11374996	11375299	.	-	.	source_transcript=ENST00000796791.1;source_transcript_name=ENST00000796791;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001127;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001127;transcript_name=HG002_chrY_T0001127;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001127:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11375300	11433942	.	-	.	source_transcript=ENST00000796791.1;source_transcript_name=ENST00000796791;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001127;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001127;transcript_name=HG002_chrY_T0001127;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001127:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796791.1;source_transcript_name=ENST00000796791;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001127;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001127;transcript_name=HG002_chrY_T0001127;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001127:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11436136	.	-	.	source_transcript=ENST00000796791.1;source_transcript_name=ENST00000796791;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001127;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001127;transcript_name=HG002_chrY_T0001127;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001127:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436175	.	-	.	source_transcript=ENST00000796791.1;source_transcript_name=ENST00000796791;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001127;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001127;transcript_name=HG002_chrY_T0001127;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001127:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11374996	11436217	1000	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001128;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001128;gene_name=ENSG00000291032;ID=HG002_chrY_T0001128;Name=ENSG00000291032
HG002_chrY	CAT	exon	11374996	11375269	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001128;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001128;transcript_name=HG002_chrY_T0001128;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001128:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11375270	11376852	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001128;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001128;transcript_name=HG002_chrY_T0001128;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001128:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11376853	11377083	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001128;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001128;transcript_name=HG002_chrY_T0001128;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001128:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11377084	11433942	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001128;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001128;transcript_name=HG002_chrY_T0001128;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001128:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001128;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001128;transcript_name=HG002_chrY_T0001128;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001128:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11436136	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001128;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001128;transcript_name=HG002_chrY_T0001128;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001128:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436217	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001128;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001128;transcript_name=HG002_chrY_T0001128;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001128:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11374999	11436175	1000	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001129;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001129;gene_name=ENSG00000291032;ID=HG002_chrY_T0001129;Name=ENSG00000291032
HG002_chrY	CAT	exon	11374999	11375981	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001129;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001129;transcript_name=HG002_chrY_T0001129;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001129:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11375982	11376852	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001129;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001129;transcript_name=HG002_chrY_T0001129;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001129:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11376853	11377083	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001129;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001129;transcript_name=HG002_chrY_T0001129;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001129:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11377084	11433942	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001129;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001129;transcript_name=HG002_chrY_T0001129;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001129:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001129;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001129;transcript_name=HG002_chrY_T0001129;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001129:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11436136	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001129;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001129;transcript_name=HG002_chrY_T0001129;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001129:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436175	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001129;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001129;transcript_name=HG002_chrY_T0001129;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001129:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11375000	11436217	1000	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001130;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001130;gene_name=ENSG00000291032;ID=HG002_chrY_T0001130;Name=ENSG00000291032
HG002_chrY	CAT	exon	11375000	11375299	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001130;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001130;transcript_name=HG002_chrY_T0001130;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001130:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11375300	11376084	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001130;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001130;transcript_name=HG002_chrY_T0001130;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001130:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11376085	11376239	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001130;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001130;transcript_name=HG002_chrY_T0001130;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001130:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11376240	11376852	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001130;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001130;transcript_name=HG002_chrY_T0001130;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001130:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11376853	11377083	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001130;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001130;transcript_name=HG002_chrY_T0001130;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001130:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11377084	11433942	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001130;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001130;transcript_name=HG002_chrY_T0001130;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001130:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001130;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001130;transcript_name=HG002_chrY_T0001130;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001130:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11436136	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001130;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001130;transcript_name=HG002_chrY_T0001130;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001130:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436217	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001130;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001130;transcript_name=HG002_chrY_T0001130;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001130:4;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11376688	11436204	1000	-	.	source_transcript=ENST00000796793.1;source_transcript_name=ENST00000796793;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796793.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001132;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001132;gene_name=ENSG00000291032;ID=HG002_chrY_T0001132;Name=ENSG00000291032
HG002_chrY	CAT	exon	11376688	11377083	.	-	.	source_transcript=ENST00000796793.1;source_transcript_name=ENST00000796793;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001132;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001132;transcript_name=HG002_chrY_T0001132;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001132:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11377084	11433942	.	-	.	source_transcript=ENST00000796793.1;source_transcript_name=ENST00000796793;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001132;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001132;transcript_name=HG002_chrY_T0001132;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001132:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796793.1;source_transcript_name=ENST00000796793;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001132;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001132;transcript_name=HG002_chrY_T0001132;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001132:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11436136	.	-	.	source_transcript=ENST00000796793.1;source_transcript_name=ENST00000796793;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001132;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001132;transcript_name=HG002_chrY_T0001132;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001132:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436204	.	-	.	source_transcript=ENST00000796793.1;source_transcript_name=ENST00000796793;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001132;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001132;transcript_name=HG002_chrY_T0001132;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001132:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11382841	11436320	1000	-	.	source_transcript=ENST00000651211.3;source_transcript_name=ENST00000651211;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651211.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000651211.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001133;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001133;gene_name=ENSG00000291032;ID=HG002_chrY_T0001133;Name=ENSG00000291032
HG002_chrY	CAT	exon	11382841	11384336	.	-	.	source_transcript=ENST00000651211.3;source_transcript_name=ENST00000651211;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651211.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000651211.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001133;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001133;transcript_name=HG002_chrY_T0001133;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001133:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11384337	11433942	.	-	.	source_transcript=ENST00000651211.3;source_transcript_name=ENST00000651211;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651211.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000651211.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001133;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001133;transcript_name=HG002_chrY_T0001133;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001133:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000651211.3;source_transcript_name=ENST00000651211;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651211.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000651211.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001133;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001133;transcript_name=HG002_chrY_T0001133;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001133:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11436136	.	-	.	source_transcript=ENST00000651211.3;source_transcript_name=ENST00000651211;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651211.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000651211.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001133;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001133;transcript_name=HG002_chrY_T0001133;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001133:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436320	.	-	.	source_transcript=ENST00000651211.3;source_transcript_name=ENST00000651211;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651211.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000651211.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001133;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001133;transcript_name=HG002_chrY_T0001133;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001133:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11382848	11436406	1000	-	.	source_transcript=ENST00000796794.1;source_transcript_name=ENST00000796794;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796794.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001134;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001134;gene_name=ENSG00000291032;ID=HG002_chrY_T0001134;Name=ENSG00000291032
HG002_chrY	CAT	exon	11382848	11384325	.	-	.	source_transcript=ENST00000796794.1;source_transcript_name=ENST00000796794;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001134;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001134;transcript_name=HG002_chrY_T0001134;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001134:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11384326	11433942	.	-	.	source_transcript=ENST00000796794.1;source_transcript_name=ENST00000796794;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001134;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001134;transcript_name=HG002_chrY_T0001134;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001134:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796794.1;source_transcript_name=ENST00000796794;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001134;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001134;transcript_name=HG002_chrY_T0001134;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001134:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11436136	.	-	.	source_transcript=ENST00000796794.1;source_transcript_name=ENST00000796794;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001134;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001134;transcript_name=HG002_chrY_T0001134;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001134:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436406	.	-	.	source_transcript=ENST00000796794.1;source_transcript_name=ENST00000796794;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001134;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001134;transcript_name=HG002_chrY_T0001134;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001134:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11382946	11436238	1000	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001135;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001135;gene_name=ENSG00000291032;ID=HG002_chrY_T0001135;Name=ENSG00000291032
HG002_chrY	CAT	exon	11382946	11383738	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001135;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001135;transcript_name=HG002_chrY_T0001135;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001135:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11383739	11384107	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001135;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001135;transcript_name=HG002_chrY_T0001135;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001135:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11384108	11384336	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001135;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001135;transcript_name=HG002_chrY_T0001135;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001135:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11384337	11433942	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001135;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001135;transcript_name=HG002_chrY_T0001135;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001135:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001135;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001135;transcript_name=HG002_chrY_T0001135;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001135:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11436136	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001135;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001135;transcript_name=HG002_chrY_T0001135;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001135:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436238	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001135;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001135;transcript_name=HG002_chrY_T0001135;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001135:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11383044	11436223	1000	-	.	source_transcript=ENST00000796796.1;source_transcript_name=ENST00000796796;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796796.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001136;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001136;gene_name=ENSG00000291032;ID=HG002_chrY_T0001136;Name=ENSG00000291032
HG002_chrY	CAT	exon	11383044	11384336	.	-	.	source_transcript=ENST00000796796.1;source_transcript_name=ENST00000796796;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796796.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001136;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001136;transcript_name=HG002_chrY_T0001136;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001136:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11384337	11433942	.	-	.	source_transcript=ENST00000796796.1;source_transcript_name=ENST00000796796;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796796.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001136;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001136;transcript_name=HG002_chrY_T0001136;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001136:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796796.1;source_transcript_name=ENST00000796796;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796796.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001136;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001136;transcript_name=HG002_chrY_T0001136;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001136:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11436140	.	-	.	source_transcript=ENST00000796796.1;source_transcript_name=ENST00000796796;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796796.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001136;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001136;transcript_name=HG002_chrY_T0001136;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001136:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436141	11436223	.	-	.	source_transcript=ENST00000796796.1;source_transcript_name=ENST00000796796;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796796.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001136;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001136;transcript_name=HG002_chrY_T0001136;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001136:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11383044	11436004	1000	-	.	source_transcript=ENST00000796800.1;source_transcript_name=ENST00000796800;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796800.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001137;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001137;gene_name=ENSG00000291032;ID=HG002_chrY_T0001137;Name=ENSG00000291032
HG002_chrY	CAT	exon	11383044	11384336	.	-	.	source_transcript=ENST00000796800.1;source_transcript_name=ENST00000796800;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796800.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001137;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001137;transcript_name=HG002_chrY_T0001137;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001137:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11384337	11433942	.	-	.	source_transcript=ENST00000796800.1;source_transcript_name=ENST00000796800;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796800.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001137;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001137;transcript_name=HG002_chrY_T0001137;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001137:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796800.1;source_transcript_name=ENST00000796800;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796800.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001137;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001137;transcript_name=HG002_chrY_T0001137;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001137:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11435413	.	-	.	source_transcript=ENST00000796800.1;source_transcript_name=ENST00000796800;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796800.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001137;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001137;transcript_name=HG002_chrY_T0001137;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001137:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11435414	11436004	.	-	.	source_transcript=ENST00000796800.1;source_transcript_name=ENST00000796800;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796800.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001137;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001137;transcript_name=HG002_chrY_T0001137;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001137:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11383044	11436217	1000	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001138;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001138;gene_name=ENSG00000291032;ID=HG002_chrY_T0001138;Name=ENSG00000291032
HG002_chrY	CAT	exon	11383044	11384336	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001138;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001138;transcript_name=HG002_chrY_T0001138;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001138:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11384337	11433942	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001138;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001138;transcript_name=HG002_chrY_T0001138;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001138:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001138;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001138;transcript_name=HG002_chrY_T0001138;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001138:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11435275	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001138;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001138;transcript_name=HG002_chrY_T0001138;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001138:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11435276	11435363	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001138;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001138;transcript_name=HG002_chrY_T0001138;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001138:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11435364	11436136	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001138;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001138;transcript_name=HG002_chrY_T0001138;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001138:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436217	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001138;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001138;transcript_name=HG002_chrY_T0001138;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001138:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11383044	11436217	1000	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001139;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001139;gene_name=ENSG00000291032;ID=HG002_chrY_T0001139;Name=ENSG00000291032
HG002_chrY	CAT	exon	11383044	11384336	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001139;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001139;transcript_name=HG002_chrY_T0001139;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001139:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11384337	11433942	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001139;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001139;transcript_name=HG002_chrY_T0001139;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001139:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001139;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001139;transcript_name=HG002_chrY_T0001139;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001139:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11435544	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001139;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001139;transcript_name=HG002_chrY_T0001139;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001139:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11435545	11435654	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001139;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001139;transcript_name=HG002_chrY_T0001139;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001139:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11435655	11436136	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001139;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001139;transcript_name=HG002_chrY_T0001139;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001139:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436217	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001139;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001139;transcript_name=HG002_chrY_T0001139;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001139:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11383044	11436186	1000	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001140;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001140;gene_name=ENSG00000291032;ID=HG002_chrY_T0001140;Name=ENSG00000291032
HG002_chrY	CAT	exon	11383044	11384325	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001140;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001140;transcript_name=HG002_chrY_T0001140;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001140:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11384326	11433942	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001140;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001140;transcript_name=HG002_chrY_T0001140;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001140:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001140;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001140;transcript_name=HG002_chrY_T0001140;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001140:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11435544	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001140;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001140;transcript_name=HG002_chrY_T0001140;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001140:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11435545	11435654	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001140;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001140;transcript_name=HG002_chrY_T0001140;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001140:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11435655	11436136	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001140;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001140;transcript_name=HG002_chrY_T0001140;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001140:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436186	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001140;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001140;transcript_name=HG002_chrY_T0001140;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001140:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11383044	11436150	1000	-	.	source_transcript=ENST00000687423.1;source_transcript_name=ENST00000687423;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000687423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000687423.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001141;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001141;gene_name=ENSG00000291032;ID=HG002_chrY_T0001141;Name=ENSG00000291032
HG002_chrY	CAT	exon	11383044	11384336	.	-	.	source_transcript=ENST00000687423.1;source_transcript_name=ENST00000687423;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000687423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000687423.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001141;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001141;transcript_name=HG002_chrY_T0001141;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001141:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11384337	11433942	.	-	.	source_transcript=ENST00000687423.1;source_transcript_name=ENST00000687423;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000687423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000687423.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001141;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001141;transcript_name=HG002_chrY_T0001141;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001141:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000687423.1;source_transcript_name=ENST00000687423;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000687423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000687423.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001141;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001141;transcript_name=HG002_chrY_T0001141;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001141:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11435929	.	-	.	source_transcript=ENST00000687423.1;source_transcript_name=ENST00000687423;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000687423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000687423.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001141;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001141;transcript_name=HG002_chrY_T0001141;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001141:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11435930	11436150	.	-	.	source_transcript=ENST00000687423.1;source_transcript_name=ENST00000687423;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000687423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000687423.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001141;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001141;transcript_name=HG002_chrY_T0001141;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001141:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11383582	11436179	1000	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001142;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001142;gene_name=ENSG00000291032;ID=HG002_chrY_T0001142;Name=ENSG00000291032
HG002_chrY	CAT	exon	11383582	11383738	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001142;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001142;transcript_name=HG002_chrY_T0001142;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001142:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11383739	11384107	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001142;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001142;transcript_name=HG002_chrY_T0001142;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001142:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11384108	11384336	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001142;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001142;transcript_name=HG002_chrY_T0001142;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001142:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11384337	11430884	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001142;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001142;transcript_name=HG002_chrY_T0001142;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001142:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11430885	11430944	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001142;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001142;transcript_name=HG002_chrY_T0001142;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001142:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11430945	11433942	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001142;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001142;transcript_name=HG002_chrY_T0001142;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001142:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001142;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001142;transcript_name=HG002_chrY_T0001142;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001142:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11436136	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001142;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001142;transcript_name=HG002_chrY_T0001142;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001142:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436179	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001142;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001142;transcript_name=HG002_chrY_T0001142;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001142:4;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11383582	11436223	1000	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001143;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001143;gene_name=ENSG00000291032;ID=HG002_chrY_T0001143;Name=ENSG00000291032
HG002_chrY	CAT	exon	11383582	11383738	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001143;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001143;transcript_name=HG002_chrY_T0001143;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001143:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11383739	11384107	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001143;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001143;transcript_name=HG002_chrY_T0001143;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001143:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11384108	11384161	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001143;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001143;transcript_name=HG002_chrY_T0001143;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001143:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11384162	11384274	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001143;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001143;transcript_name=HG002_chrY_T0001143;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001143:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11384275	11384336	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001143;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001143;transcript_name=HG002_chrY_T0001143;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001143:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11384337	11433942	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001143;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001143;transcript_name=HG002_chrY_T0001143;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001143:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001143;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001143;transcript_name=HG002_chrY_T0001143;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001143:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11436136	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001143;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001143;transcript_name=HG002_chrY_T0001143;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001143:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436223	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001143;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001143;transcript_name=HG002_chrY_T0001143;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001143:4;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11384016	11436217	1000	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001144;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001144;gene_name=ENSG00000291032;ID=HG002_chrY_T0001144;Name=ENSG00000291032
HG002_chrY	CAT	exon	11384016	11384161	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001144;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001144;transcript_name=HG002_chrY_T0001144;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001144:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11384162	11384274	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001144;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001144;transcript_name=HG002_chrY_T0001144;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001144:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11384275	11384336	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001144;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001144;transcript_name=HG002_chrY_T0001144;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001144:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11384337	11433942	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001144;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001144;transcript_name=HG002_chrY_T0001144;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001144:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001144;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001144;transcript_name=HG002_chrY_T0001144;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001144:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11436136	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001144;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001144;transcript_name=HG002_chrY_T0001144;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001144:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436217	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001144;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001144;transcript_name=HG002_chrY_T0001144;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001144:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11384016	11436196	1000	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001145;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001145;gene_name=ENSG00000291032;ID=HG002_chrY_T0001145;Name=ENSG00000291032
HG002_chrY	CAT	exon	11384016	11384336	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001145;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001145;transcript_name=HG002_chrY_T0001145;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001145:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11384337	11430884	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001145;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001145;transcript_name=HG002_chrY_T0001145;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001145:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11430885	11430944	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001145;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001145;transcript_name=HG002_chrY_T0001145;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001145:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11430945	11433942	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001145;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001145;transcript_name=HG002_chrY_T0001145;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001145:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001145;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001145;transcript_name=HG002_chrY_T0001145;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001145:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11436136	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001145;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001145;transcript_name=HG002_chrY_T0001145;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001145:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436196	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001145;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001145;transcript_name=HG002_chrY_T0001145;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001145:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11384016	11435691	1000	-	.	source_transcript=ENST00000796808.1;source_transcript_name=ENST00000796808;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796808.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001146;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001146;gene_name=ENSG00000291032;ID=HG002_chrY_T0001146;Name=ENSG00000291032
HG002_chrY	CAT	exon	11384016	11384336	.	-	.	source_transcript=ENST00000796808.1;source_transcript_name=ENST00000796808;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001146;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001146;transcript_name=HG002_chrY_T0001146;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001146:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11384337	11433942	.	-	.	source_transcript=ENST00000796808.1;source_transcript_name=ENST00000796808;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001146;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001146;transcript_name=HG002_chrY_T0001146;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001146:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796808.1;source_transcript_name=ENST00000796808;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001146;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001146;transcript_name=HG002_chrY_T0001146;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001146:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11435544	.	-	.	source_transcript=ENST00000796808.1;source_transcript_name=ENST00000796808;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001146;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001146;transcript_name=HG002_chrY_T0001146;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001146:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11435545	11435691	.	-	.	source_transcript=ENST00000796808.1;source_transcript_name=ENST00000796808;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001146;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001146;transcript_name=HG002_chrY_T0001146;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001146:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11384053	11436182	1000	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001147;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001147;gene_name=ENSG00000291032;ID=HG002_chrY_T0001147;Name=ENSG00000291032
HG002_chrY	CAT	exon	11384053	11384336	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001147;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001147;transcript_name=HG002_chrY_T0001147;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001147:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11384337	11433942	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001147;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001147;transcript_name=HG002_chrY_T0001147;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001147:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001147;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001147;transcript_name=HG002_chrY_T0001147;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001147:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11435413	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001147;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001147;transcript_name=HG002_chrY_T0001147;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001147:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11435414	11435654	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001147;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001147;transcript_name=HG002_chrY_T0001147;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001147:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11435655	11436136	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001147;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001147;transcript_name=HG002_chrY_T0001147;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001147:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436182	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001147;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001147;transcript_name=HG002_chrY_T0001147;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001147:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11384053	11436217	1000	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001148;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001148;gene_name=ENSG00000291032;ID=HG002_chrY_T0001148;Name=ENSG00000291032
HG002_chrY	CAT	exon	11384053	11384336	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001148;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001148;transcript_name=HG002_chrY_T0001148;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001148:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11384337	11400026	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001148;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001148;transcript_name=HG002_chrY_T0001148;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001148:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11400027	11400229	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001148;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001148;transcript_name=HG002_chrY_T0001148;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001148:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11400230	11433942	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001148;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001148;transcript_name=HG002_chrY_T0001148;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001148:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001148;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001148;transcript_name=HG002_chrY_T0001148;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001148:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11436136	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001148;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001148;transcript_name=HG002_chrY_T0001148;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001148:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436217	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001148;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001148;transcript_name=HG002_chrY_T0001148;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001148:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11384053	11436204	1000	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001149;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001149;gene_name=ENSG00000291032;ID=HG002_chrY_T0001149;Name=ENSG00000291032
HG002_chrY	CAT	exon	11384053	11384336	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001149;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001149;transcript_name=HG002_chrY_T0001149;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001149:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11384337	11433942	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001149;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001149;transcript_name=HG002_chrY_T0001149;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001149:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001149;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001149;transcript_name=HG002_chrY_T0001149;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001149:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11435413	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001149;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001149;transcript_name=HG002_chrY_T0001149;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001149:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11435414	11435433	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001149;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001149;transcript_name=HG002_chrY_T0001149;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001149:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11435434	11436136	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001149;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001149;transcript_name=HG002_chrY_T0001149;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001149:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436204	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001149;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001149;transcript_name=HG002_chrY_T0001149;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001149:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11387150	11436226	1000	-	.	source_transcript=ENST00000796809.1;source_transcript_name=ENST00000796809;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796809.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001150;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001150;gene_name=ENSG00000291032;ID=HG002_chrY_T0001150;Name=ENSG00000291032
HG002_chrY	CAT	exon	11387150	11388416	.	-	.	source_transcript=ENST00000796809.1;source_transcript_name=ENST00000796809;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796809.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001150;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001150;transcript_name=HG002_chrY_T0001150;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001150:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11388417	11433942	.	-	.	source_transcript=ENST00000796809.1;source_transcript_name=ENST00000796809;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796809.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001150;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001150;transcript_name=HG002_chrY_T0001150;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001150:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796809.1;source_transcript_name=ENST00000796809;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796809.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001150;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001150;transcript_name=HG002_chrY_T0001150;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001150:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11436136	.	-	.	source_transcript=ENST00000796809.1;source_transcript_name=ENST00000796809;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796809.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001150;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001150;transcript_name=HG002_chrY_T0001150;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001150:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436226	.	-	.	source_transcript=ENST00000796809.1;source_transcript_name=ENST00000796809;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796809.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001150;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001150;transcript_name=HG002_chrY_T0001150;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001150:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11388173	11435654	1000	-	.	source_transcript=ENST00000796811.1;source_transcript_name=ENST00000796811;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796811.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001151;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001151;gene_name=ENSG00000291032;ID=HG002_chrY_T0001151;Name=ENSG00000291032
HG002_chrY	CAT	exon	11388173	11388416	.	-	.	source_transcript=ENST00000796811.1;source_transcript_name=ENST00000796811;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796811.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001151;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001151;transcript_name=HG002_chrY_T0001151;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001151:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11388417	11433942	.	-	.	source_transcript=ENST00000796811.1;source_transcript_name=ENST00000796811;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796811.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001151;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001151;transcript_name=HG002_chrY_T0001151;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001151:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796811.1;source_transcript_name=ENST00000796811;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796811.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001151;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001151;transcript_name=HG002_chrY_T0001151;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001151:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11435544	.	-	.	source_transcript=ENST00000796811.1;source_transcript_name=ENST00000796811;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796811.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001151;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001151;transcript_name=HG002_chrY_T0001151;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001151:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11435545	11435654	.	-	.	source_transcript=ENST00000796811.1;source_transcript_name=ENST00000796811;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796811.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001151;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001151;transcript_name=HG002_chrY_T0001151;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001151:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11388175	11435654	1000	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001152;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001152;gene_name=ENSG00000291032;ID=HG002_chrY_T0001152;Name=ENSG00000291032
HG002_chrY	CAT	exon	11388175	11388416	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001152;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001152;transcript_name=HG002_chrY_T0001152;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001152:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11388417	11430884	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001152;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001152;transcript_name=HG002_chrY_T0001152;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001152:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11430885	11430944	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001152;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001152;transcript_name=HG002_chrY_T0001152;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001152:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11430945	11433942	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001152;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001152;transcript_name=HG002_chrY_T0001152;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001152:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001152;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001152;transcript_name=HG002_chrY_T0001152;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001152:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11435544	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001152;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001152;transcript_name=HG002_chrY_T0001152;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001152:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11435545	11435654	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001152;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001152;transcript_name=HG002_chrY_T0001152;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001152:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11388504	11436177	1000	-	.	source_transcript=ENST00000796810.1;source_transcript_name=ENST00000796810;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796810.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001153;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001153;gene_name=ENSG00000291032;ID=HG002_chrY_T0001153;Name=ENSG00000291032
HG002_chrY	CAT	exon	11388504	11388843	.	-	.	source_transcript=ENST00000796810.1;source_transcript_name=ENST00000796810;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796810.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001153;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001153;transcript_name=HG002_chrY_T0001153;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001153:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11388844	11433942	.	-	.	source_transcript=ENST00000796810.1;source_transcript_name=ENST00000796810;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796810.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001153;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001153;transcript_name=HG002_chrY_T0001153;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001153:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796810.1;source_transcript_name=ENST00000796810;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796810.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001153;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001153;transcript_name=HG002_chrY_T0001153;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001153:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11436136	.	-	.	source_transcript=ENST00000796810.1;source_transcript_name=ENST00000796810;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796810.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001153;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001153;transcript_name=HG002_chrY_T0001153;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001153:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436177	.	-	.	source_transcript=ENST00000796810.1;source_transcript_name=ENST00000796810;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796810.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001153;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001153;transcript_name=HG002_chrY_T0001153;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001153:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11390776	11436222	1000	-	.	source_transcript=ENST00000796813.1;source_transcript_name=ENST00000796813;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796813.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001154;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001154;gene_name=ENSG00000291032;ID=HG002_chrY_T0001154;Name=ENSG00000291032
HG002_chrY	CAT	exon	11390776	11391580	.	-	.	source_transcript=ENST00000796813.1;source_transcript_name=ENST00000796813;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796813.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001154;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001154;transcript_name=HG002_chrY_T0001154;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001154:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11391581	11433942	.	-	.	source_transcript=ENST00000796813.1;source_transcript_name=ENST00000796813;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796813.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001154;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001154;transcript_name=HG002_chrY_T0001154;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001154:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796813.1;source_transcript_name=ENST00000796813;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796813.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001154;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001154;transcript_name=HG002_chrY_T0001154;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001154:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11436136	.	-	.	source_transcript=ENST00000796813.1;source_transcript_name=ENST00000796813;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796813.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001154;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001154;transcript_name=HG002_chrY_T0001154;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001154:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436222	.	-	.	source_transcript=ENST00000796813.1;source_transcript_name=ENST00000796813;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796813.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001154;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001154;transcript_name=HG002_chrY_T0001154;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001154:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11394348	11436223	1000	-	.	source_transcript=ENST00000796814.1;source_transcript_name=ENST00000796814;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796814.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001155;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001155;gene_name=ENSG00000291032;ID=HG002_chrY_T0001155;Name=ENSG00000291032
HG002_chrY	CAT	exon	11394348	11394574	.	-	.	source_transcript=ENST00000796814.1;source_transcript_name=ENST00000796814;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796814.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001155;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001155;transcript_name=HG002_chrY_T0001155;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001155:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11394575	11433942	.	-	.	source_transcript=ENST00000796814.1;source_transcript_name=ENST00000796814;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796814.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001155;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001155;transcript_name=HG002_chrY_T0001155;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001155:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796814.1;source_transcript_name=ENST00000796814;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796814.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001155;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001155;transcript_name=HG002_chrY_T0001155;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001155:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11436136	.	-	.	source_transcript=ENST00000796814.1;source_transcript_name=ENST00000796814;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796814.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001155;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001155;transcript_name=HG002_chrY_T0001155;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001155:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436223	.	-	.	source_transcript=ENST00000796814.1;source_transcript_name=ENST00000796814;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796814.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001155;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001155;transcript_name=HG002_chrY_T0001155;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001155:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11399751	11436204	1000	-	.	source_transcript=ENST00000796815.1;source_transcript_name=ENST00000796815;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796815.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001158;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001158;gene_name=ENSG00000291032;ID=HG002_chrY_T0001158;Name=ENSG00000291032
HG002_chrY	CAT	exon	11399751	11400229	.	-	.	source_transcript=ENST00000796815.1;source_transcript_name=ENST00000796815;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796815.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001158;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001158;transcript_name=HG002_chrY_T0001158;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001158:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11400230	11433942	.	-	.	source_transcript=ENST00000796815.1;source_transcript_name=ENST00000796815;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796815.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001158;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001158;transcript_name=HG002_chrY_T0001158;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001158:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796815.1;source_transcript_name=ENST00000796815;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796815.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001158;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001158;transcript_name=HG002_chrY_T0001158;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001158:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11436136	.	-	.	source_transcript=ENST00000796815.1;source_transcript_name=ENST00000796815;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796815.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001158;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001158;transcript_name=HG002_chrY_T0001158;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001158:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436204	.	-	.	source_transcript=ENST00000796815.1;source_transcript_name=ENST00000796815;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796815.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001158;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001158;transcript_name=HG002_chrY_T0001158;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001158:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11424525	11436222	1000	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001159;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001159;gene_name=ENSG00000291032;ID=HG002_chrY_T0001159;Name=ENSG00000291032
HG002_chrY	CAT	exon	11424525	11424725	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001159;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001159;transcript_name=HG002_chrY_T0001159;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001159:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11424726	11430884	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001159;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001159;transcript_name=HG002_chrY_T0001159;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001159:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11430885	11430944	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001159;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001159;transcript_name=HG002_chrY_T0001159;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001159:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11430945	11433942	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001159;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001159;transcript_name=HG002_chrY_T0001159;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001159:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001159;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001159;transcript_name=HG002_chrY_T0001159;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001159:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11436136	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001159;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001159;transcript_name=HG002_chrY_T0001159;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001159:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436222	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001159;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001159;transcript_name=HG002_chrY_T0001159;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001159:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11427601	11436222	1000	-	.	source_transcript=ENST00000796817.1;source_transcript_name=ENST00000796817;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796817.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001160;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001160;gene_name=ENSG00000291032;ID=HG002_chrY_T0001160;Name=ENSG00000291032
HG002_chrY	CAT	exon	11427601	11427880	.	-	.	source_transcript=ENST00000796817.1;source_transcript_name=ENST00000796817;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796817.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001160;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001160;transcript_name=HG002_chrY_T0001160;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001160:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11427881	11433942	.	-	.	source_transcript=ENST00000796817.1;source_transcript_name=ENST00000796817;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796817.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001160;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001160;transcript_name=HG002_chrY_T0001160;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001160:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796817.1;source_transcript_name=ENST00000796817;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796817.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001160;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001160;transcript_name=HG002_chrY_T0001160;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001160:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11436136	.	-	.	source_transcript=ENST00000796817.1;source_transcript_name=ENST00000796817;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796817.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001160;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001160;transcript_name=HG002_chrY_T0001160;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001160:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436222	.	-	.	source_transcript=ENST00000796817.1;source_transcript_name=ENST00000796817;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796817.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001160;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001160;transcript_name=HG002_chrY_T0001160;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001160:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11430736	11436217	1000	-	.	source_transcript=ENST00000796818.1;source_transcript_name=ENST00000796818;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796818.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001161;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001161;gene_name=ENSG00000291032;ID=HG002_chrY_T0001161;Name=ENSG00000291032
HG002_chrY	CAT	exon	11430736	11430944	.	-	.	source_transcript=ENST00000796818.1;source_transcript_name=ENST00000796818;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796818.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001161;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001161;transcript_name=HG002_chrY_T0001161;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001161:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11430945	11433942	.	-	.	source_transcript=ENST00000796818.1;source_transcript_name=ENST00000796818;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796818.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001161;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001161;transcript_name=HG002_chrY_T0001161;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001161:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11433943	11434001	.	-	.	source_transcript=ENST00000796818.1;source_transcript_name=ENST00000796818;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796818.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001161;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001161;transcript_name=HG002_chrY_T0001161;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001161:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11436136	.	-	.	source_transcript=ENST00000796818.1;source_transcript_name=ENST00000796818;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796818.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001161;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001161;transcript_name=HG002_chrY_T0001161;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001161:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436217	.	-	.	source_transcript=ENST00000796818.1;source_transcript_name=ENST00000796818;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796818.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001161;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001161;transcript_name=HG002_chrY_T0001161;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001161:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11432831	11436177	1000	-	.	source_transcript=ENST00000796820.1;source_transcript_name=ENST00000796820;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796820.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001162;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001162;gene_name=ENSG00000291032;ID=HG002_chrY_T0001162;Name=ENSG00000291032
HG002_chrY	CAT	exon	11432831	11434001	.	-	.	source_transcript=ENST00000796820.1;source_transcript_name=ENST00000796820;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796820.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001162;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001162;transcript_name=HG002_chrY_T0001162;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001162:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11435544	.	-	.	source_transcript=ENST00000796820.1;source_transcript_name=ENST00000796820;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796820.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001162;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001162;transcript_name=HG002_chrY_T0001162;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001162:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11435545	11435654	.	-	.	source_transcript=ENST00000796820.1;source_transcript_name=ENST00000796820;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796820.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001162;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001162;transcript_name=HG002_chrY_T0001162;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001162:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11435655	11436136	.	-	.	source_transcript=ENST00000796820.1;source_transcript_name=ENST00000796820;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796820.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001162;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001162;transcript_name=HG002_chrY_T0001162;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001162:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436177	.	-	.	source_transcript=ENST00000796820.1;source_transcript_name=ENST00000796820;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796820.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001162;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001162;transcript_name=HG002_chrY_T0001162;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001162:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11432831	11436222	1000	-	.	source_transcript=ENST00000796819.1;source_transcript_name=ENST00000796819;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796819.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001163;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001163;gene_name=ENSG00000291032;ID=HG002_chrY_T0001163;Name=ENSG00000291032
HG002_chrY	CAT	exon	11432831	11434001	.	-	.	source_transcript=ENST00000796819.1;source_transcript_name=ENST00000796819;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001163;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001163;transcript_name=HG002_chrY_T0001163;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001163:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11436136	.	-	.	source_transcript=ENST00000796819.1;source_transcript_name=ENST00000796819;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001163;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001163;transcript_name=HG002_chrY_T0001163;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001163:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11436137	11436222	.	-	.	source_transcript=ENST00000796819.1;source_transcript_name=ENST00000796819;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001163;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001163;transcript_name=HG002_chrY_T0001163;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001163:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	11433966	11436150	1000	-	.	source_transcript=ENST00000796821.1;source_transcript_name=ENST00000796821;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796821.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001164;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_G0000372;transcript_name=HG002_chrY_T0001164;gene_name=ENSG00000291032;ID=HG002_chrY_T0001164;Name=ENSG00000291032
HG002_chrY	CAT	exon	11433966	11434001	.	-	.	source_transcript=ENST00000796821.1;source_transcript_name=ENST00000796821;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796821.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001164;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001164;transcript_name=HG002_chrY_T0001164;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001164:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11434002	11435275	.	-	.	source_transcript=ENST00000796821.1;source_transcript_name=ENST00000796821;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796821.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001164;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001164;transcript_name=HG002_chrY_T0001164;gene_name=ENSG00000291032;ID=intron:HG002_chrY_T0001164:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11435276	11436150	.	-	.	source_transcript=ENST00000796821.1;source_transcript_name=ENST00000796821;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796821.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG002_chrY_T0001164;gene_id=HG002_chrY_G0000372;Parent=HG002_chrY_T0001164;transcript_name=HG002_chrY_T0001164;gene_name=ENSG00000291032;ID=exon:HG002_chrY_T0001164:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	11365448	11365690	.	+	.	source_gene_common_name=ENSG00000274231;source_gene=ENSG00000274231.1;alternative_source_transcripts=ENST00000619901.1,ENST00000619901.1;gene_id=HG002_chrY_G0000373;gene_biotype=processed_pseudogene;gene_name=ENSG00000274231;gene_sources=liftoff;ID=HG002_chrY_G0000373;Name=ENSG00000274231
HG002_chrY	CAT	transcript	11365448	11365690	1000	+	.	source_transcript=ENST00000619901.1;source_transcript_name=ENST00000619901;source_gene=ENSG00000274231.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274231.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619901.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274231;alternative_source_transcripts=ENST00000619901.1,ENST00000619901.1;transcript_id=HG002_chrY_T0001123;gene_id=HG002_chrY_G0000373;Parent=HG002_chrY_G0000373;transcript_name=HG002_chrY_T0001123;gene_name=ENSG00000274231;ID=HG002_chrY_T0001123;Name=ENSG00000274231
HG002_chrY	CAT	exon	11365448	11365690	.	+	.	source_transcript=ENST00000619901.1;source_transcript_name=ENST00000619901;source_gene=ENSG00000274231.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274231.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619901.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274231;alternative_source_transcripts=ENST00000619901.1,ENST00000619901.1;transcript_id=HG002_chrY_T0001123;gene_id=HG002_chrY_G0000373;Parent=HG002_chrY_T0001123;transcript_name=HG002_chrY_T0001123;gene_name=ENSG00000274231;ID=exon:HG002_chrY_T0001123:0;Name=ENSG00000274231;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	11375057	11380212	.	-	.	source_gene_common_name=ENSG00000278212;source_gene=ENSG00000278212.5;gene_id=HG002_chrY_G0000374;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000278212;gene_sources=liftoff;ID=HG002_chrY_G0000374;Name=ENSG00000278212
HG002_chrY	CAT	transcript	11375057	11380212	1000	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG002_chrY_T0001131;gene_id=HG002_chrY_G0000374;Parent=HG002_chrY_G0000374;transcript_name=HG002_chrY_T0001131;gene_name=ENSG00000278212;ID=HG002_chrY_T0001131;Name=ENSG00000278212
HG002_chrY	CAT	exon	11375057	11375269	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG002_chrY_T0001131;gene_id=HG002_chrY_G0000374;Parent=HG002_chrY_T0001131;transcript_name=HG002_chrY_T0001131;gene_name=ENSG00000278212;ID=exon:HG002_chrY_T0001131:0;Name=ENSG00000278212;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11375270	11376084	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG002_chrY_T0001131;gene_id=HG002_chrY_G0000374;Parent=HG002_chrY_T0001131;transcript_name=HG002_chrY_T0001131;gene_name=ENSG00000278212;ID=intron:HG002_chrY_T0001131:0;Name=ENSG00000278212;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11376085	11376239	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG002_chrY_T0001131;gene_id=HG002_chrY_G0000374;Parent=HG002_chrY_T0001131;transcript_name=HG002_chrY_T0001131;gene_name=ENSG00000278212;ID=exon:HG002_chrY_T0001131:1;Name=ENSG00000278212;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11376240	11376852	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG002_chrY_T0001131;gene_id=HG002_chrY_G0000374;Parent=HG002_chrY_T0001131;transcript_name=HG002_chrY_T0001131;gene_name=ENSG00000278212;ID=intron:HG002_chrY_T0001131:1;Name=ENSG00000278212;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11376853	11377083	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG002_chrY_T0001131;gene_id=HG002_chrY_G0000374;Parent=HG002_chrY_T0001131;transcript_name=HG002_chrY_T0001131;gene_name=ENSG00000278212;ID=exon:HG002_chrY_T0001131:2;Name=ENSG00000278212;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11377084	11377766	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG002_chrY_T0001131;gene_id=HG002_chrY_G0000374;Parent=HG002_chrY_T0001131;transcript_name=HG002_chrY_T0001131;gene_name=ENSG00000278212;ID=intron:HG002_chrY_T0001131:2;Name=ENSG00000278212;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11377767	11377887	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG002_chrY_T0001131;gene_id=HG002_chrY_G0000374;Parent=HG002_chrY_T0001131;transcript_name=HG002_chrY_T0001131;gene_name=ENSG00000278212;ID=exon:HG002_chrY_T0001131:3;Name=ENSG00000278212;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11377888	11378251	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG002_chrY_T0001131;gene_id=HG002_chrY_G0000374;Parent=HG002_chrY_T0001131;transcript_name=HG002_chrY_T0001131;gene_name=ENSG00000278212;ID=intron:HG002_chrY_T0001131:3;Name=ENSG00000278212;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11378252	11378322	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG002_chrY_T0001131;gene_id=HG002_chrY_G0000374;Parent=HG002_chrY_T0001131;transcript_name=HG002_chrY_T0001131;gene_name=ENSG00000278212;ID=exon:HG002_chrY_T0001131:4;Name=ENSG00000278212;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11378323	11379735	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG002_chrY_T0001131;gene_id=HG002_chrY_G0000374;Parent=HG002_chrY_T0001131;transcript_name=HG002_chrY_T0001131;gene_name=ENSG00000278212;ID=intron:HG002_chrY_T0001131:4;Name=ENSG00000278212;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11379736	11380212	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG002_chrY_T0001131;gene_id=HG002_chrY_G0000374;Parent=HG002_chrY_T0001131;transcript_name=HG002_chrY_T0001131;gene_name=ENSG00000278212;ID=exon:HG002_chrY_T0001131:5;Name=ENSG00000278212;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	11394815	11395018	.	+	.	source_gene_common_name=ANKRD20A6P;source_gene=ENSG00000274502.1;alternative_source_transcripts=ENST00000618763.1,ENST00000618763.1;gene_id=HG002_chrY_G0000375;gene_biotype=processed_pseudogene;gene_name=ANKRD20A6P;gene_sources=liftoff;ID=HG002_chrY_G0000375;Name=ANKRD20A6P
HG002_chrY	CAT	transcript	11394815	11395018	1000	+	.	source_transcript=ENST00000618763.1;source_transcript_name=ANKRD20A6P-201;source_gene=ENSG00000274502.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274502.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000618763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618763.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD20A6P;alternative_source_transcripts=ENST00000618763.1,ENST00000618763.1;transcript_id=HG002_chrY_T0001156;gene_id=HG002_chrY_G0000375;Parent=HG002_chrY_G0000375;transcript_name=HG002_chrY_T0001156;gene_name=ANKRD20A6P;ID=HG002_chrY_T0001156;Name=ANKRD20A6P
HG002_chrY	CAT	exon	11394815	11395018	.	+	.	source_transcript=ENST00000618763.1;source_transcript_name=ANKRD20A6P-201;source_gene=ENSG00000274502.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274502.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000618763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618763.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD20A6P;alternative_source_transcripts=ENST00000618763.1,ENST00000618763.1;transcript_id=HG002_chrY_T0001156;gene_id=HG002_chrY_G0000375;Parent=HG002_chrY_T0001156;transcript_name=HG002_chrY_T0001156;gene_name=ANKRD20A6P;ID=exon:HG002_chrY_T0001156:0;Name=ANKRD20A6P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	11399505	11400015	.	+	.	source_gene_common_name=SNX18P1Y;source_gene=ENSG00000274162.1;alternative_source_transcripts=ENST00000616231.1,ENST00000616231.1;gene_id=HG002_chrY_G0000376;gene_biotype=processed_pseudogene;gene_name=SNX18P1Y;gene_sources=liftoff;ID=HG002_chrY_G0000376;Name=SNX18P1Y
HG002_chrY	CAT	transcript	11399505	11400015	1000	+	.	source_transcript=ENST00000616231.1;source_transcript_name=SNX18P1Y-201;source_gene=ENSG00000274162.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274162.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000616231.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616231.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNX18P1Y;alternative_source_transcripts=ENST00000616231.1,ENST00000616231.1;transcript_id=HG002_chrY_T0001157;gene_id=HG002_chrY_G0000376;Parent=HG002_chrY_G0000376;transcript_name=HG002_chrY_T0001157;gene_name=SNX18P1Y;ID=HG002_chrY_T0001157;Name=SNX18P1Y
HG002_chrY	CAT	exon	11399505	11400015	.	+	.	source_transcript=ENST00000616231.1;source_transcript_name=SNX18P1Y-201;source_gene=ENSG00000274162.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274162.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000616231.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616231.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNX18P1Y;alternative_source_transcripts=ENST00000616231.1,ENST00000616231.1;transcript_id=HG002_chrY_T0001157;gene_id=HG002_chrY_G0000376;Parent=HG002_chrY_T0001157;transcript_name=HG002_chrY_T0001157;gene_name=SNX18P1Y;ID=exon:HG002_chrY_T0001157:0;Name=SNX18P1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	11528105	11529368	.	+	.	source_gene_common_name=DUX4L16;source_gene=ENSG00000258567.1;alternative_source_transcripts=ENST00000555130.1,ENST00000555130.1;gene_id=HG002_chrY_G0000377;gene_biotype=unprocessed_pseudogene;gene_name=DUX4L16;gene_sources=liftoff;ID=HG002_chrY_G0000377;Name=DUX4L16
HG002_chrY	CAT	transcript	11528105	11529368	1000	+	.	source_transcript=ENST00000555130.1;source_transcript_name=DUX4L16-201;source_gene=ENSG00000258567.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000258567.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000555130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000555130.1;transcript_score=199.921;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L16;alternative_source_transcripts=ENST00000555130.1,ENST00000555130.1;transcript_id=HG002_chrY_T0001165;gene_id=HG002_chrY_G0000377;Parent=HG002_chrY_G0000377;transcript_name=HG002_chrY_T0001165;gene_name=DUX4L16;ID=HG002_chrY_T0001165;Name=DUX4L16
HG002_chrY	CAT	exon	11528105	11529368	.	+	.	source_transcript=ENST00000555130.1;source_transcript_name=DUX4L16-201;source_gene=ENSG00000258567.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000258567.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000555130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000555130.1;transcript_score=199.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L16;alternative_source_transcripts=ENST00000555130.1,ENST00000555130.1;transcript_id=HG002_chrY_T0001165;gene_id=HG002_chrY_G0000377;Parent=HG002_chrY_T0001165;transcript_name=HG002_chrY_T0001165;gene_name=DUX4L16;ID=exon:HG002_chrY_T0001165:0;Name=DUX4L16;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	11536108	11537374	.	+	.	source_gene_common_name=DUX4L17;source_gene=ENSG00000259154.1;alternative_source_transcripts=ENST00000557360.1,ENST00000557360.1;gene_id=HG002_chrY_G0000378;gene_biotype=unprocessed_pseudogene;gene_name=DUX4L17;gene_sources=liftoff;ID=HG002_chrY_G0000378;Name=DUX4L17
HG002_chrY	CAT	transcript	11536108	11537374	1000	+	.	source_transcript=ENST00000557360.1;source_transcript_name=DUX4L17-201;source_gene=ENSG00000259154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000557360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000557360.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L17;alternative_source_transcripts=ENST00000557360.1,ENST00000557360.1;transcript_id=HG002_chrY_T0001166;gene_id=HG002_chrY_G0000378;Parent=HG002_chrY_G0000378;transcript_name=HG002_chrY_T0001166;gene_name=DUX4L17;ID=HG002_chrY_T0001166;Name=DUX4L17
HG002_chrY	CAT	exon	11536108	11537374	.	+	.	source_transcript=ENST00000557360.1;source_transcript_name=DUX4L17-201;source_gene=ENSG00000259154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000557360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000557360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L17;alternative_source_transcripts=ENST00000557360.1,ENST00000557360.1;transcript_id=HG002_chrY_T0001166;gene_id=HG002_chrY_G0000378;Parent=HG002_chrY_T0001166;transcript_name=HG002_chrY_T0001166;gene_name=DUX4L17;ID=exon:HG002_chrY_T0001166:0;Name=DUX4L17;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	11542744	11544010	.	+	.	source_gene_common_name=DUX4L18;source_gene=ENSG00000259029.1;alternative_source_transcripts=ENST00000553347.1,ENST00000553347.1;gene_id=HG002_chrY_G0000379;gene_biotype=unprocessed_pseudogene;gene_name=DUX4L18;gene_sources=liftoff;ID=HG002_chrY_G0000379;Name=DUX4L18
HG002_chrY	CAT	transcript	11542744	11544010	1000	+	.	source_transcript=ENST00000553347.1;source_transcript_name=DUX4L18-201;source_gene=ENSG00000259029.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259029.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000553347.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000553347.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L18;alternative_source_transcripts=ENST00000553347.1,ENST00000553347.1;transcript_id=HG002_chrY_T0001167;gene_id=HG002_chrY_G0000379;Parent=HG002_chrY_G0000379;transcript_name=HG002_chrY_T0001167;gene_name=DUX4L18;ID=HG002_chrY_T0001167;Name=DUX4L18
HG002_chrY	CAT	exon	11542744	11544010	.	+	.	source_transcript=ENST00000553347.1;source_transcript_name=DUX4L18-201;source_gene=ENSG00000259029.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259029.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000553347.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000553347.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L18;alternative_source_transcripts=ENST00000553347.1,ENST00000553347.1;transcript_id=HG002_chrY_T0001167;gene_id=HG002_chrY_G0000379;Parent=HG002_chrY_T0001167;transcript_name=HG002_chrY_T0001167;gene_name=DUX4L18;ID=exon:HG002_chrY_T0001167:0;Name=DUX4L18;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	11553517	11554783	.	+	.	source_gene_common_name=DUX4L19;source_gene=ENSG00000258991.1;alternative_source_transcripts=ENST00000557448.1,ENST00000557448.1;gene_id=HG002_chrY_G0000380;gene_biotype=unprocessed_pseudogene;gene_name=DUX4L19;gene_sources=liftoff;ID=HG002_chrY_G0000380;Name=DUX4L19
HG002_chrY	CAT	transcript	11553517	11554783	1000	+	.	source_transcript=ENST00000557448.1;source_transcript_name=DUX4L19-201;source_gene=ENSG00000258991.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000258991.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000557448.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000557448.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L19;alternative_source_transcripts=ENST00000557448.1,ENST00000557448.1;transcript_id=HG002_chrY_T0001168;gene_id=HG002_chrY_G0000380;Parent=HG002_chrY_G0000380;transcript_name=HG002_chrY_T0001168;gene_name=DUX4L19;ID=HG002_chrY_T0001168;Name=DUX4L19
HG002_chrY	CAT	exon	11553517	11554783	.	+	.	source_transcript=ENST00000557448.1;source_transcript_name=DUX4L19-201;source_gene=ENSG00000258991.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000258991.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000557448.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000557448.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L19;alternative_source_transcripts=ENST00000557448.1,ENST00000557448.1;transcript_id=HG002_chrY_T0001168;gene_id=HG002_chrY_G0000380;Parent=HG002_chrY_T0001168;transcript_name=HG002_chrY_T0001168;gene_name=DUX4L19;ID=exon:HG002_chrY_T0001168:0;Name=DUX4L19;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	11556815	11558881	.	+	.	source_gene_common_name=PABPC1P5;source_gene=ENSG00000270455.1;alternative_source_transcripts=ENST00000603738.1,ENST00000603738.1;gene_id=HG002_chrY_G0000381;gene_biotype=processed_pseudogene;gene_name=PABPC1P5;gene_sources=liftoff;ID=HG002_chrY_G0000381;Name=PABPC1P5
HG002_chrY	CAT	transcript	11556815	11558881	1000	+	.	source_transcript=ENST00000603738.1;source_transcript_name=PABPC1P5-201;source_gene=ENSG00000270455.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270455.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000603738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000603738.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PABPC1P5;alternative_source_transcripts=ENST00000603738.1,ENST00000603738.1;transcript_id=HG002_chrY_T0001169;gene_id=HG002_chrY_G0000381;Parent=HG002_chrY_G0000381;transcript_name=HG002_chrY_T0001169;gene_name=PABPC1P5;ID=HG002_chrY_T0001169;Name=PABPC1P5
HG002_chrY	CAT	exon	11556815	11556983	.	+	.	source_transcript=ENST00000603738.1;source_transcript_name=PABPC1P5-201;source_gene=ENSG00000270455.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270455.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000603738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000603738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PABPC1P5;alternative_source_transcripts=ENST00000603738.1,ENST00000603738.1;transcript_id=HG002_chrY_T0001169;gene_id=HG002_chrY_G0000381;Parent=HG002_chrY_T0001169;transcript_name=HG002_chrY_T0001169;gene_name=PABPC1P5;ID=exon:HG002_chrY_T0001169:0;Name=PABPC1P5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11556984	11557374	.	+	.	source_transcript=ENST00000603738.1;source_transcript_name=PABPC1P5-201;source_gene=ENSG00000270455.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270455.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000603738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000603738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PABPC1P5;alternative_source_transcripts=ENST00000603738.1,ENST00000603738.1;transcript_id=HG002_chrY_T0001169;gene_id=HG002_chrY_G0000381;Parent=HG002_chrY_T0001169;transcript_name=HG002_chrY_T0001169;gene_name=PABPC1P5;ID=intron:HG002_chrY_T0001169:0;Name=PABPC1P5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11557375	11558881	.	+	.	source_transcript=ENST00000603738.1;source_transcript_name=PABPC1P5-201;source_gene=ENSG00000270455.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270455.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000603738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000603738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PABPC1P5;alternative_source_transcripts=ENST00000603738.1,ENST00000603738.1;transcript_id=HG002_chrY_T0001169;gene_id=HG002_chrY_G0000381;Parent=HG002_chrY_T0001169;transcript_name=HG002_chrY_T0001169;gene_name=PABPC1P5;ID=exon:HG002_chrY_T0001169:1;Name=PABPC1P5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	11561767	11606861	.	-	.	source_gene_common_name=SLC9B1P1;source_gene=ENSG00000183704.7;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;gene_id=HG002_chrY_G0000382;gene_biotype=unprocessed_pseudogene;gene_name=SLC9B1P1;gene_sources=liftoff;ID=HG002_chrY_G0000382;Name=SLC9B1P1
HG002_chrY	CAT	transcript	11561767	11606861	1000	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG002_chrY_T0001170;gene_id=HG002_chrY_G0000382;Parent=HG002_chrY_G0000382;transcript_name=HG002_chrY_T0001170;gene_name=SLC9B1P1;ID=HG002_chrY_T0001170;Name=SLC9B1P1
HG002_chrY	CAT	exon	11561767	11561982	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG002_chrY_T0001170;gene_id=HG002_chrY_G0000382;Parent=HG002_chrY_T0001170;transcript_name=HG002_chrY_T0001170;gene_name=SLC9B1P1;ID=exon:HG002_chrY_T0001170:0;Name=SLC9B1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11561983	11566155	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG002_chrY_T0001170;gene_id=HG002_chrY_G0000382;Parent=HG002_chrY_T0001170;transcript_name=HG002_chrY_T0001170;gene_name=SLC9B1P1;ID=intron:HG002_chrY_T0001170:0;Name=SLC9B1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11566156	11566292	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG002_chrY_T0001170;gene_id=HG002_chrY_G0000382;Parent=HG002_chrY_T0001170;transcript_name=HG002_chrY_T0001170;gene_name=SLC9B1P1;ID=exon:HG002_chrY_T0001170:1;Name=SLC9B1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11566293	11567179	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG002_chrY_T0001170;gene_id=HG002_chrY_G0000382;Parent=HG002_chrY_T0001170;transcript_name=HG002_chrY_T0001170;gene_name=SLC9B1P1;ID=intron:HG002_chrY_T0001170:1;Name=SLC9B1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11567180	11567288	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG002_chrY_T0001170;gene_id=HG002_chrY_G0000382;Parent=HG002_chrY_T0001170;transcript_name=HG002_chrY_T0001170;gene_name=SLC9B1P1;ID=exon:HG002_chrY_T0001170:2;Name=SLC9B1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11567289	11571072	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG002_chrY_T0001170;gene_id=HG002_chrY_G0000382;Parent=HG002_chrY_T0001170;transcript_name=HG002_chrY_T0001170;gene_name=SLC9B1P1;ID=intron:HG002_chrY_T0001170:2;Name=SLC9B1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11571073	11571222	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG002_chrY_T0001170;gene_id=HG002_chrY_G0000382;Parent=HG002_chrY_T0001170;transcript_name=HG002_chrY_T0001170;gene_name=SLC9B1P1;ID=exon:HG002_chrY_T0001170:3;Name=SLC9B1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11571223	11572064	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG002_chrY_T0001170;gene_id=HG002_chrY_G0000382;Parent=HG002_chrY_T0001170;transcript_name=HG002_chrY_T0001170;gene_name=SLC9B1P1;ID=intron:HG002_chrY_T0001170:3;Name=SLC9B1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11572065	11572171	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG002_chrY_T0001170;gene_id=HG002_chrY_G0000382;Parent=HG002_chrY_T0001170;transcript_name=HG002_chrY_T0001170;gene_name=SLC9B1P1;ID=exon:HG002_chrY_T0001170:4;Name=SLC9B1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11572172	11590054	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG002_chrY_T0001170;gene_id=HG002_chrY_G0000382;Parent=HG002_chrY_T0001170;transcript_name=HG002_chrY_T0001170;gene_name=SLC9B1P1;ID=intron:HG002_chrY_T0001170:4;Name=SLC9B1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11590055	11590230	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG002_chrY_T0001170;gene_id=HG002_chrY_G0000382;Parent=HG002_chrY_T0001170;transcript_name=HG002_chrY_T0001170;gene_name=SLC9B1P1;ID=exon:HG002_chrY_T0001170:5;Name=SLC9B1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11590231	11602801	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG002_chrY_T0001170;gene_id=HG002_chrY_G0000382;Parent=HG002_chrY_T0001170;transcript_name=HG002_chrY_T0001170;gene_name=SLC9B1P1;ID=intron:HG002_chrY_T0001170:5;Name=SLC9B1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11602802	11602929	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG002_chrY_T0001170;gene_id=HG002_chrY_G0000382;Parent=HG002_chrY_T0001170;transcript_name=HG002_chrY_T0001170;gene_name=SLC9B1P1;ID=exon:HG002_chrY_T0001170:6;Name=SLC9B1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11602930	11604043	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG002_chrY_T0001170;gene_id=HG002_chrY_G0000382;Parent=HG002_chrY_T0001170;transcript_name=HG002_chrY_T0001170;gene_name=SLC9B1P1;ID=intron:HG002_chrY_T0001170:6;Name=SLC9B1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11604044	11604186	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG002_chrY_T0001170;gene_id=HG002_chrY_G0000382;Parent=HG002_chrY_T0001170;transcript_name=HG002_chrY_T0001170;gene_name=SLC9B1P1;ID=exon:HG002_chrY_T0001170:7;Name=SLC9B1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11604187	11606690	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG002_chrY_T0001170;gene_id=HG002_chrY_G0000382;Parent=HG002_chrY_T0001170;transcript_name=HG002_chrY_T0001170;gene_name=SLC9B1P1;ID=intron:HG002_chrY_T0001170:7;Name=SLC9B1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11606691	11606861	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG002_chrY_T0001170;gene_id=HG002_chrY_G0000382;Parent=HG002_chrY_T0001170;transcript_name=HG002_chrY_T0001170;gene_name=SLC9B1P1;ID=exon:HG002_chrY_T0001170:8;Name=SLC9B1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	11616877	11618254	.	+	.	source_gene_common_name=ACTR3BP1;source_gene=ENSG00000270242.1;alternative_source_transcripts=ENST00000605584.1,ENST00000605584.1;gene_id=HG002_chrY_G0000383;gene_biotype=processed_pseudogene;gene_name=ACTR3BP1;gene_sources=liftoff;ID=HG002_chrY_G0000383;Name=ACTR3BP1
HG002_chrY	CAT	transcript	11616877	11618254	1000	+	.	source_transcript=ENST00000605584.1;source_transcript_name=ACTR3BP1-201;source_gene=ENSG00000270242.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270242.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000605584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000605584.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTR3BP1;alternative_source_transcripts=ENST00000605584.1,ENST00000605584.1;transcript_id=HG002_chrY_T0001171;gene_id=HG002_chrY_G0000383;Parent=HG002_chrY_G0000383;transcript_name=HG002_chrY_T0001171;gene_name=ACTR3BP1;ID=HG002_chrY_T0001171;Name=ACTR3BP1
HG002_chrY	CAT	exon	11616877	11616917	.	+	.	source_transcript=ENST00000605584.1;source_transcript_name=ACTR3BP1-201;source_gene=ENSG00000270242.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270242.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000605584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000605584.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTR3BP1;alternative_source_transcripts=ENST00000605584.1,ENST00000605584.1;transcript_id=HG002_chrY_T0001171;gene_id=HG002_chrY_G0000383;Parent=HG002_chrY_T0001171;transcript_name=HG002_chrY_T0001171;gene_name=ACTR3BP1;ID=exon:HG002_chrY_T0001171:0;Name=ACTR3BP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11616918	11617048	.	+	.	source_transcript=ENST00000605584.1;source_transcript_name=ACTR3BP1-201;source_gene=ENSG00000270242.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270242.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000605584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000605584.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTR3BP1;alternative_source_transcripts=ENST00000605584.1,ENST00000605584.1;transcript_id=HG002_chrY_T0001171;gene_id=HG002_chrY_G0000383;Parent=HG002_chrY_T0001171;transcript_name=HG002_chrY_T0001171;gene_name=ACTR3BP1;ID=intron:HG002_chrY_T0001171:0;Name=ACTR3BP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11617049	11618254	.	+	.	source_transcript=ENST00000605584.1;source_transcript_name=ACTR3BP1-201;source_gene=ENSG00000270242.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270242.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000605584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000605584.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTR3BP1;alternative_source_transcripts=ENST00000605584.1,ENST00000605584.1;transcript_id=HG002_chrY_T0001171;gene_id=HG002_chrY_G0000383;Parent=HG002_chrY_T0001171;transcript_name=HG002_chrY_T0001171;gene_name=ACTR3BP1;ID=exon:HG002_chrY_T0001171:1;Name=ACTR3BP1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	11633733	11639901	.	+	.	source_gene_common_name=CHEK2P1;source_gene=ENSG00000275828.1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;gene_id=HG002_chrY_G0000384;gene_biotype=unprocessed_pseudogene;gene_name=CHEK2P1;gene_sources=liftoff;ID=HG002_chrY_G0000384;Name=CHEK2P1
HG002_chrY	CAT	transcript	11633733	11639901	1000	+	.	source_transcript=ENST00000614446.1;source_transcript_name=CHEK2P1-201;source_gene=ENSG00000275828.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275828.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000614446.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614446.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CHEK2P1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;transcript_id=HG002_chrY_T0001172;gene_id=HG002_chrY_G0000384;Parent=HG002_chrY_G0000384;transcript_name=HG002_chrY_T0001172;gene_name=CHEK2P1;ID=HG002_chrY_T0001172;Name=CHEK2P1
HG002_chrY	CAT	exon	11633733	11633818	.	+	.	source_transcript=ENST00000614446.1;source_transcript_name=CHEK2P1-201;source_gene=ENSG00000275828.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275828.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000614446.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614446.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CHEK2P1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;transcript_id=HG002_chrY_T0001172;gene_id=HG002_chrY_G0000384;Parent=HG002_chrY_T0001172;transcript_name=HG002_chrY_T0001172;gene_name=CHEK2P1;ID=exon:HG002_chrY_T0001172:0;Name=CHEK2P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11633819	11638581	.	+	.	source_transcript=ENST00000614446.1;source_transcript_name=CHEK2P1-201;source_gene=ENSG00000275828.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275828.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000614446.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614446.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CHEK2P1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;transcript_id=HG002_chrY_T0001172;gene_id=HG002_chrY_G0000384;Parent=HG002_chrY_T0001172;transcript_name=HG002_chrY_T0001172;gene_name=CHEK2P1;ID=intron:HG002_chrY_T0001172:0;Name=CHEK2P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11638582	11638662	.	+	.	source_transcript=ENST00000614446.1;source_transcript_name=CHEK2P1-201;source_gene=ENSG00000275828.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275828.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000614446.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614446.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CHEK2P1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;transcript_id=HG002_chrY_T0001172;gene_id=HG002_chrY_G0000384;Parent=HG002_chrY_T0001172;transcript_name=HG002_chrY_T0001172;gene_name=CHEK2P1;ID=exon:HG002_chrY_T0001172:1;Name=CHEK2P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11638663	11639814	.	+	.	source_transcript=ENST00000614446.1;source_transcript_name=CHEK2P1-201;source_gene=ENSG00000275828.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275828.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000614446.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614446.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CHEK2P1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;transcript_id=HG002_chrY_T0001172;gene_id=HG002_chrY_G0000384;Parent=HG002_chrY_T0001172;transcript_name=HG002_chrY_T0001172;gene_name=CHEK2P1;ID=intron:HG002_chrY_T0001172:1;Name=CHEK2P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11639815	11639901	.	+	.	source_transcript=ENST00000614446.1;source_transcript_name=CHEK2P1-201;source_gene=ENSG00000275828.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275828.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000614446.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614446.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CHEK2P1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;transcript_id=HG002_chrY_T0001172;gene_id=HG002_chrY_G0000384;Parent=HG002_chrY_T0001172;transcript_name=HG002_chrY_T0001172;gene_name=CHEK2P1;ID=exon:HG002_chrY_T0001172:2;Name=CHEK2P1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	11666603	11666749	.	-	.	source_gene_common_name=MTND1P12;source_gene=ENSG00000225433.3;alternative_source_transcripts=ENST00000455231.3,ENST00000455231.3;gene_id=HG002_chrY_G0000385;gene_biotype=unprocessed_pseudogene;gene_name=MTND1P12;gene_sources=liftoff;ID=HG002_chrY_G0000385;Name=MTND1P12
HG002_chrY	CAT	transcript	11666603	11666749	1000	-	.	source_transcript=ENST00000455231.3;source_transcript_name=MTND1P12-201;source_gene=ENSG00000225433.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225433.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455231.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000455231.3;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND1P12;alternative_source_transcripts=ENST00000455231.3,ENST00000455231.3;transcript_id=HG002_chrY_T0001173;gene_id=HG002_chrY_G0000385;Parent=HG002_chrY_G0000385;transcript_name=HG002_chrY_T0001173;gene_name=MTND1P12;ID=HG002_chrY_T0001173;Name=MTND1P12
HG002_chrY	CAT	exon	11666603	11666749	.	-	.	source_transcript=ENST00000455231.3;source_transcript_name=MTND1P12-201;source_gene=ENSG00000225433.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225433.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455231.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000455231.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND1P12;alternative_source_transcripts=ENST00000455231.3,ENST00000455231.3;transcript_id=HG002_chrY_T0001173;gene_id=HG002_chrY_G0000385;Parent=HG002_chrY_T0001173;transcript_name=HG002_chrY_T0001173;gene_name=MTND1P12;ID=exon:HG002_chrY_T0001173:0;Name=MTND1P12;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	11666893	11667286	.	-	.	source_gene_common_name=ENSG00000224567;source_gene=ENSG00000224567.2;alternative_source_transcripts=ENST00000426062.2,ENST00000426062.2;gene_id=HG002_chrY_G0000386;gene_biotype=processed_pseudogene;gene_name=ENSG00000224567;gene_sources=liftoff;ID=HG002_chrY_G0000386;Name=ENSG00000224567
HG002_chrY	CAT	transcript	11666893	11667286	1000	-	.	source_transcript=ENST00000426062.2;source_transcript_name=ENST00000426062;source_gene=ENSG00000224567.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224567.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000426062.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426062.2;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224567;alternative_source_transcripts=ENST00000426062.2,ENST00000426062.2;transcript_id=HG002_chrY_T0001174;gene_id=HG002_chrY_G0000386;Parent=HG002_chrY_G0000386;transcript_name=HG002_chrY_T0001174;gene_name=ENSG00000224567;ID=HG002_chrY_T0001174;Name=ENSG00000224567
HG002_chrY	CAT	exon	11666893	11667286	.	-	.	source_transcript=ENST00000426062.2;source_transcript_name=ENST00000426062;source_gene=ENSG00000224567.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224567.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000426062.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426062.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224567;alternative_source_transcripts=ENST00000426062.2,ENST00000426062.2;transcript_id=HG002_chrY_T0001174;gene_id=HG002_chrY_G0000386;Parent=HG002_chrY_T0001174;transcript_name=HG002_chrY_T0001174;gene_name=ENSG00000224567;ID=exon:HG002_chrY_T0001174:0;Name=ENSG00000224567;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	11694914	11695424	.	-	.	source_gene_common_name=ENSG00000271375;source_gene=ENSG00000271375.1;alternative_source_transcripts=ENST00000604178.1,ENST00000604178.1;gene_id=HG002_chrY_G0000387;gene_biotype=processed_pseudogene;gene_name=ENSG00000271375;gene_sources=liftoff;ID=HG002_chrY_G0000387;Name=ENSG00000271375
HG002_chrY	CAT	transcript	11694914	11695424	1000	-	.	source_transcript=ENST00000604178.1;source_transcript_name=ENST00000604178;source_gene=ENSG00000271375.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271375.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604178.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604178.1;transcript_score=299.743;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271375;alternative_source_transcripts=ENST00000604178.1,ENST00000604178.1;transcript_id=HG002_chrY_T0001175;gene_id=HG002_chrY_G0000387;Parent=HG002_chrY_G0000387;transcript_name=HG002_chrY_T0001175;gene_name=ENSG00000271375;ID=HG002_chrY_T0001175;Name=ENSG00000271375
HG002_chrY	CAT	exon	11694914	11695244	.	-	.	source_transcript=ENST00000604178.1;source_transcript_name=ENST00000604178;source_gene=ENSG00000271375.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271375.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604178.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604178.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271375;alternative_source_transcripts=ENST00000604178.1,ENST00000604178.1;transcript_id=HG002_chrY_T0001175;gene_id=HG002_chrY_G0000387;Parent=HG002_chrY_T0001175;transcript_name=HG002_chrY_T0001175;gene_name=ENSG00000271375;ID=exon:HG002_chrY_T0001175:0;Name=ENSG00000271375;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	11695245	11695366	.	-	.	source_transcript=ENST00000604178.1;source_transcript_name=ENST00000604178;source_gene=ENSG00000271375.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271375.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604178.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604178.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271375;alternative_source_transcripts=ENST00000604178.1,ENST00000604178.1;transcript_id=HG002_chrY_T0001175;gene_id=HG002_chrY_G0000387;Parent=HG002_chrY_T0001175;transcript_name=HG002_chrY_T0001175;gene_name=ENSG00000271375;ID=intron:HG002_chrY_T0001175:0;Name=ENSG00000271375;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	11695367	11695424	.	-	.	source_transcript=ENST00000604178.1;source_transcript_name=ENST00000604178;source_gene=ENSG00000271375.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271375.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604178.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604178.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271375;alternative_source_transcripts=ENST00000604178.1,ENST00000604178.1;transcript_id=HG002_chrY_T0001175;gene_id=HG002_chrY_G0000387;Parent=HG002_chrY_T0001175;transcript_name=HG002_chrY_T0001175;gene_name=ENSG00000271375;ID=exon:HG002_chrY_T0001175:1;Name=ENSG00000271375;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	12687833	12689307	.	-	.	source_gene_common_name=RCC2P1;source_gene=ENSG00000234385.1;alternative_source_transcripts=ENST00000452257.1,ENST00000452257.1;gene_id=HG002_chrY_G0000388;gene_biotype=processed_pseudogene;gene_name=RCC2P1;gene_sources=liftoff;ID=HG002_chrY_G0000388;Name=RCC2P1
HG002_chrY	CAT	transcript	12687833	12689307	1000	-	.	source_transcript=ENST00000452257.1;source_transcript_name=RCC2P1-201;source_gene=ENSG00000234385.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234385.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000452257.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452257.1;transcript_score=199.864;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RCC2P1;alternative_source_transcripts=ENST00000452257.1,ENST00000452257.1;transcript_id=HG002_chrY_T0001176;gene_id=HG002_chrY_G0000388;Parent=HG002_chrY_G0000388;transcript_name=HG002_chrY_T0001176;gene_name=RCC2P1;ID=HG002_chrY_T0001176;Name=RCC2P1
HG002_chrY	CAT	exon	12687833	12689307	.	-	.	source_transcript=ENST00000452257.1;source_transcript_name=RCC2P1-201;source_gene=ENSG00000234385.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234385.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000452257.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452257.1;transcript_score=199.864;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RCC2P1;alternative_source_transcripts=ENST00000452257.1,ENST00000452257.1;transcript_id=HG002_chrY_T0001176;gene_id=HG002_chrY_G0000388;Parent=HG002_chrY_T0001176;transcript_name=HG002_chrY_T0001176;gene_name=RCC2P1;ID=exon:HG002_chrY_T0001176:0;Name=RCC2P1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	12829270	12830503	.	-	.	source_gene_common_name=ASS1P6;source_gene=ENSG00000215583.3;alternative_source_transcripts=ENST00000421118.1,ENST00000421118.1;gene_id=HG002_chrY_G0000389;gene_biotype=processed_pseudogene;gene_name=ASS1P6;gene_sources=liftoff;ID=HG002_chrY_G0000389;Name=ASS1P6
HG002_chrY	CAT	transcript	12829270	12830503	1000	-	.	source_transcript=ENST00000421118.1;source_transcript_name=ASS1P6-201;source_gene=ENSG00000215583.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215583.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000421118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421118.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASS1P6;alternative_source_transcripts=ENST00000421118.1,ENST00000421118.1;transcript_id=HG002_chrY_T0001177;gene_id=HG002_chrY_G0000389;Parent=HG002_chrY_G0000389;transcript_name=HG002_chrY_T0001177;gene_name=ASS1P6;ID=HG002_chrY_T0001177;Name=ASS1P6
HG002_chrY	CAT	exon	12829270	12830503	.	-	.	source_transcript=ENST00000421118.1;source_transcript_name=ASS1P6-201;source_gene=ENSG00000215583.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215583.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000421118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421118.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASS1P6;alternative_source_transcripts=ENST00000421118.1,ENST00000421118.1;transcript_id=HG002_chrY_T0001177;gene_id=HG002_chrY_G0000389;Parent=HG002_chrY_T0001177;transcript_name=HG002_chrY_T0001177;gene_name=ASS1P6;ID=exon:HG002_chrY_T0001177:0;Name=ASS1P6;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	12863942	12894159	.	+	.	source_gene_common_name=MXRA5Y;source_gene=ENSG00000235649.2;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;gene_id=HG002_chrY_G0000390;gene_biotype=unprocessed_pseudogene;gene_name=MXRA5Y;gene_sources=liftoff;ID=HG002_chrY_G0000390;Name=MXRA5Y
HG002_chrY	CAT	transcript	12863942	12894159	1000	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=HG002_chrY_T0001178;gene_id=HG002_chrY_G0000390;Parent=HG002_chrY_G0000390;transcript_name=HG002_chrY_T0001178;gene_name=MXRA5Y;ID=HG002_chrY_T0001178;Name=MXRA5Y
HG002_chrY	CAT	exon	12863942	12864133	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=HG002_chrY_T0001178;gene_id=HG002_chrY_G0000390;Parent=HG002_chrY_T0001178;transcript_name=HG002_chrY_T0001178;gene_name=MXRA5Y;ID=exon:HG002_chrY_T0001178:0;Name=MXRA5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	12864134	12874815	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=HG002_chrY_T0001178;gene_id=HG002_chrY_G0000390;Parent=HG002_chrY_T0001178;transcript_name=HG002_chrY_T0001178;gene_name=MXRA5Y;ID=intron:HG002_chrY_T0001178:0;Name=MXRA5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	12874816	12879773	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=HG002_chrY_T0001178;gene_id=HG002_chrY_G0000390;Parent=HG002_chrY_T0001178;transcript_name=HG002_chrY_T0001178;gene_name=MXRA5Y;ID=exon:HG002_chrY_T0001178:1;Name=MXRA5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	12879774	12885647	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=HG002_chrY_T0001178;gene_id=HG002_chrY_G0000390;Parent=HG002_chrY_T0001178;transcript_name=HG002_chrY_T0001178;gene_name=MXRA5Y;ID=intron:HG002_chrY_T0001178:1;Name=MXRA5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	12885648	12886633	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=HG002_chrY_T0001178;gene_id=HG002_chrY_G0000390;Parent=HG002_chrY_T0001178;transcript_name=HG002_chrY_T0001178;gene_name=MXRA5Y;ID=exon:HG002_chrY_T0001178:2;Name=MXRA5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	12886634	12892253	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=HG002_chrY_T0001178;gene_id=HG002_chrY_G0000390;Parent=HG002_chrY_T0001178;transcript_name=HG002_chrY_T0001178;gene_name=MXRA5Y;ID=intron:HG002_chrY_T0001178:2;Name=MXRA5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	12892254	12894159	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=HG002_chrY_T0001178;gene_id=HG002_chrY_G0000390;Parent=HG002_chrY_T0001178;transcript_name=HG002_chrY_T0001178;gene_name=MXRA5Y;ID=exon:HG002_chrY_T0001178:3;Name=MXRA5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	12995287	13339207	.	-	.	source_gene_common_name=ENSG00000291034;source_gene=ENSG00000291034.2;gene_id=HG002_chrY_G0000391;gene_biotype=lncRNA;gene_name=ENSG00000291034;gene_sources=liftoff;ID=HG002_chrY_G0000391;Name=ENSG00000291034
HG002_chrY	CAT	transcript	12995287	13328840	1000	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001179;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_G0000391;transcript_name=HG002_chrY_T0001179;gene_name=ENSG00000291034;ID=HG002_chrY_T0001179;Name=ENSG00000291034
HG002_chrY	CAT	exon	12995287	12996562	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001179;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001179;transcript_name=HG002_chrY_T0001179;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001179:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	12996563	13018122	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001179;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001179;transcript_name=HG002_chrY_T0001179;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001179:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13018123	13018223	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001179;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001179;transcript_name=HG002_chrY_T0001179;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001179:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13018224	13022476	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001179;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001179;transcript_name=HG002_chrY_T0001179;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001179:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13022477	13022590	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001179;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001179;transcript_name=HG002_chrY_T0001179;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001179:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13022591	13110267	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001179;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001179;transcript_name=HG002_chrY_T0001179;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001179:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13110268	13110392	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001179;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001179;transcript_name=HG002_chrY_T0001179;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001179:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13110393	13117436	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001179;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001179;transcript_name=HG002_chrY_T0001179;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001179:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13117437	13117535	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001179;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001179;transcript_name=HG002_chrY_T0001179;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001179:4;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13117536	13148643	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001179;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001179;transcript_name=HG002_chrY_T0001179;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001179:4;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13148644	13148681	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001179;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001179;transcript_name=HG002_chrY_T0001179;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001179:5;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13148682	13313845	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001179;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001179;transcript_name=HG002_chrY_T0001179;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001179:5;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13313846	13313962	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001179;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001179;transcript_name=HG002_chrY_T0001179;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001179:6;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13313963	13314257	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001179;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001179;transcript_name=HG002_chrY_T0001179;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001179:6;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13314258	13314399	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001179;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001179;transcript_name=HG002_chrY_T0001179;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001179:7;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13314400	13327777	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001179;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001179;transcript_name=HG002_chrY_T0001179;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001179:7;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13327778	13327916	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001179;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001179;transcript_name=HG002_chrY_T0001179;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001179:8;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13327917	13328788	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001179;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001179;transcript_name=HG002_chrY_T0001179;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001179:8;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13328789	13328840	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001179;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001179;transcript_name=HG002_chrY_T0001179;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001179:9;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13112988	13329049	1000	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001180;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_G0000391;transcript_name=HG002_chrY_T0001180;gene_name=ENSG00000291034;ID=HG002_chrY_T0001180;Name=ENSG00000291034
HG002_chrY	CAT	exon	13112988	13113855	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001180;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001180;transcript_name=HG002_chrY_T0001180;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001180:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13113856	13148643	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001180;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001180;transcript_name=HG002_chrY_T0001180;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001180:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13148644	13148681	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001180;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001180;transcript_name=HG002_chrY_T0001180;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001180:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13148682	13161258	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001180;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001180;transcript_name=HG002_chrY_T0001180;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001180:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13161259	13161380	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001180;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001180;transcript_name=HG002_chrY_T0001180;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001180:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13161381	13165154	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001180;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001180;transcript_name=HG002_chrY_T0001180;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001180:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13165155	13165304	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001180;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001180;transcript_name=HG002_chrY_T0001180;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001180:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13165305	13314257	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001180;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001180;transcript_name=HG002_chrY_T0001180;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001180:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13314258	13314399	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001180;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001180;transcript_name=HG002_chrY_T0001180;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001180:4;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13314400	13327777	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001180;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001180;transcript_name=HG002_chrY_T0001180;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001180:4;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13327778	13327916	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001180;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001180;transcript_name=HG002_chrY_T0001180;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001180:5;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13327917	13329011	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001180;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001180;transcript_name=HG002_chrY_T0001180;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001180:5;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13329012	13329049	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001180;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001180;transcript_name=HG002_chrY_T0001180;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001180:6;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13233658	13329026	1000	-	.	source_transcript=ENST00000737326.1;source_transcript_name=ENST00000737326;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737326.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001185;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_G0000391;transcript_name=HG002_chrY_T0001185;gene_name=ENSG00000291034;ID=HG002_chrY_T0001185;Name=ENSG00000291034
HG002_chrY	CAT	exon	13233658	13233941	.	-	.	source_transcript=ENST00000737326.1;source_transcript_name=ENST00000737326;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001185;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001185;transcript_name=HG002_chrY_T0001185;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001185:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13233942	13314257	.	-	.	source_transcript=ENST00000737326.1;source_transcript_name=ENST00000737326;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001185;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001185;transcript_name=HG002_chrY_T0001185;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001185:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13314258	13314399	.	-	.	source_transcript=ENST00000737326.1;source_transcript_name=ENST00000737326;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001185;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001185;transcript_name=HG002_chrY_T0001185;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001185:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13314400	13327777	.	-	.	source_transcript=ENST00000737326.1;source_transcript_name=ENST00000737326;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001185;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001185;transcript_name=HG002_chrY_T0001185;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001185:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13327778	13327916	.	-	.	source_transcript=ENST00000737326.1;source_transcript_name=ENST00000737326;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001185;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001185;transcript_name=HG002_chrY_T0001185;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001185:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13327917	13328901	.	-	.	source_transcript=ENST00000737326.1;source_transcript_name=ENST00000737326;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001185;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001185;transcript_name=HG002_chrY_T0001185;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001185:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13328902	13329026	.	-	.	source_transcript=ENST00000737326.1;source_transcript_name=ENST00000737326;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001185;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001185;transcript_name=HG002_chrY_T0001185;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001185:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13233658	13329060	1000	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001186;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_G0000391;transcript_name=HG002_chrY_T0001186;gene_name=ENSG00000291034;ID=HG002_chrY_T0001186;Name=ENSG00000291034
HG002_chrY	CAT	exon	13233658	13233941	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001186;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001186;transcript_name=HG002_chrY_T0001186;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001186:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13233942	13314257	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001186;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001186;transcript_name=HG002_chrY_T0001186;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001186:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13314258	13314399	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001186;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001186;transcript_name=HG002_chrY_T0001186;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001186:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13314400	13327777	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001186;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001186;transcript_name=HG002_chrY_T0001186;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001186:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13327778	13327916	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001186;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001186;transcript_name=HG002_chrY_T0001186;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001186:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13327917	13329011	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001186;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001186;transcript_name=HG002_chrY_T0001186;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001186:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13329012	13329060	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001186;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001186;transcript_name=HG002_chrY_T0001186;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001186:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13233660	13329012	1000	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001187;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_G0000391;transcript_name=HG002_chrY_T0001187;gene_name=ENSG00000291034;ID=HG002_chrY_T0001187;Name=ENSG00000291034
HG002_chrY	CAT	exon	13233660	13233941	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001187;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001187;transcript_name=HG002_chrY_T0001187;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001187:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13233942	13313845	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001187;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001187;transcript_name=HG002_chrY_T0001187;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001187:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13313846	13313962	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001187;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001187;transcript_name=HG002_chrY_T0001187;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001187:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13313963	13314257	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001187;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001187;transcript_name=HG002_chrY_T0001187;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001187:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13314258	13314399	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001187;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001187;transcript_name=HG002_chrY_T0001187;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001187:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13314400	13327777	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001187;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001187;transcript_name=HG002_chrY_T0001187;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001187:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13327778	13327916	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001187;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001187;transcript_name=HG002_chrY_T0001187;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001187:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13327917	13328901	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001187;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001187;transcript_name=HG002_chrY_T0001187;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001187:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13328902	13329012	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001187;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001187;transcript_name=HG002_chrY_T0001187;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001187:4;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13247012	13329046	1000	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001191;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_G0000391;transcript_name=HG002_chrY_T0001191;gene_name=ENSG00000291034;ID=HG002_chrY_T0001191;Name=ENSG00000291034
HG002_chrY	CAT	exon	13247012	13247219	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001191;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001191;transcript_name=HG002_chrY_T0001191;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001191:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13247220	13314257	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001191;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001191;transcript_name=HG002_chrY_T0001191;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001191:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13314258	13314399	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001191;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001191;transcript_name=HG002_chrY_T0001191;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001191:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13314400	13327777	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001191;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001191;transcript_name=HG002_chrY_T0001191;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001191:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13327778	13327916	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001191;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001191;transcript_name=HG002_chrY_T0001191;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001191:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13327917	13329011	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001191;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001191;transcript_name=HG002_chrY_T0001191;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001191:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13329012	13329046	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001191;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001191;transcript_name=HG002_chrY_T0001191;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001191:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13261681	13329046	1000	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001195;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_G0000391;transcript_name=HG002_chrY_T0001195;gene_name=ENSG00000291034;ID=HG002_chrY_T0001195;Name=ENSG00000291034
HG002_chrY	CAT	exon	13261681	13262040	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001195;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001195;transcript_name=HG002_chrY_T0001195;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001195:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13262041	13314257	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001195;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001195;transcript_name=HG002_chrY_T0001195;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001195:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13314258	13314399	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001195;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001195;transcript_name=HG002_chrY_T0001195;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001195:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13314400	13327777	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001195;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001195;transcript_name=HG002_chrY_T0001195;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001195:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13327778	13327916	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001195;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001195;transcript_name=HG002_chrY_T0001195;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001195:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13327917	13329011	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001195;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001195;transcript_name=HG002_chrY_T0001195;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001195:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13329012	13329046	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001195;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001195;transcript_name=HG002_chrY_T0001195;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001195:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13261685	13327918	1000	-	.	source_transcript=ENST00000382966.5;source_transcript_name=ENST00000382966;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382966.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382966.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001196;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_G0000391;transcript_name=HG002_chrY_T0001196;gene_name=ENSG00000291034;ID=HG002_chrY_T0001196;Name=ENSG00000291034
HG002_chrY	CAT	exon	13261685	13262040	.	-	.	source_transcript=ENST00000382966.5;source_transcript_name=ENST00000382966;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382966.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382966.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001196;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001196;transcript_name=HG002_chrY_T0001196;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001196:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13262041	13314257	.	-	.	source_transcript=ENST00000382966.5;source_transcript_name=ENST00000382966;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382966.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382966.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001196;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001196;transcript_name=HG002_chrY_T0001196;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001196:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13314258	13314399	.	-	.	source_transcript=ENST00000382966.5;source_transcript_name=ENST00000382966;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382966.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382966.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001196;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001196;transcript_name=HG002_chrY_T0001196;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001196:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13314400	13327777	.	-	.	source_transcript=ENST00000382966.5;source_transcript_name=ENST00000382966;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382966.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382966.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001196;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001196;transcript_name=HG002_chrY_T0001196;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001196:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13327778	13327918	.	-	.	source_transcript=ENST00000382966.5;source_transcript_name=ENST00000382966;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382966.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382966.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001196;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001196;transcript_name=HG002_chrY_T0001196;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001196:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13285989	13329084	1000	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001197;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_G0000391;transcript_name=HG002_chrY_T0001197;gene_name=ENSG00000291034;ID=HG002_chrY_T0001197;Name=ENSG00000291034
HG002_chrY	CAT	exon	13285989	13286217	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001197;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001197;transcript_name=HG002_chrY_T0001197;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001197:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13286218	13314257	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001197;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001197;transcript_name=HG002_chrY_T0001197;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001197:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13314258	13314399	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001197;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001197;transcript_name=HG002_chrY_T0001197;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001197:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13314400	13327777	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001197;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001197;transcript_name=HG002_chrY_T0001197;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001197:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13327778	13327916	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001197;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001197;transcript_name=HG002_chrY_T0001197;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001197:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13327917	13329011	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001197;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001197;transcript_name=HG002_chrY_T0001197;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001197:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13329012	13329084	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001197;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001197;transcript_name=HG002_chrY_T0001197;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001197:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13285989	13329024	1000	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001198;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_G0000391;transcript_name=HG002_chrY_T0001198;gene_name=ENSG00000291034;ID=HG002_chrY_T0001198;Name=ENSG00000291034
HG002_chrY	CAT	exon	13285989	13286217	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001198;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001198;transcript_name=HG002_chrY_T0001198;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001198:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13286218	13289646	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001198;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001198;transcript_name=HG002_chrY_T0001198;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001198:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13289647	13289795	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001198;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001198;transcript_name=HG002_chrY_T0001198;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001198:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13289796	13314257	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001198;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001198;transcript_name=HG002_chrY_T0001198;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001198:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13314258	13314399	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001198;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001198;transcript_name=HG002_chrY_T0001198;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001198:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13314400	13327777	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001198;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001198;transcript_name=HG002_chrY_T0001198;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001198:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13327778	13327916	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001198;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001198;transcript_name=HG002_chrY_T0001198;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001198:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13327917	13328901	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001198;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001198;transcript_name=HG002_chrY_T0001198;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001198:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13328902	13329024	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001198;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001198;transcript_name=HG002_chrY_T0001198;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001198:4;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13285989	13329021	1000	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001199;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_G0000391;transcript_name=HG002_chrY_T0001199;gene_name=ENSG00000291034;ID=HG002_chrY_T0001199;Name=ENSG00000291034
HG002_chrY	CAT	exon	13285989	13286217	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001199;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001199;transcript_name=HG002_chrY_T0001199;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001199:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13286218	13314257	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001199;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001199;transcript_name=HG002_chrY_T0001199;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001199:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13314258	13314399	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001199;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001199;transcript_name=HG002_chrY_T0001199;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001199:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13314400	13327777	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001199;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001199;transcript_name=HG002_chrY_T0001199;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001199:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13327778	13327916	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001199;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001199;transcript_name=HG002_chrY_T0001199;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001199:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13327917	13328901	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001199;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001199;transcript_name=HG002_chrY_T0001199;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001199:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13328902	13329021	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001199;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001199;transcript_name=HG002_chrY_T0001199;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001199:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13285989	13328791	1000	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001200;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_G0000391;transcript_name=HG002_chrY_T0001200;gene_name=ENSG00000291034;ID=HG002_chrY_T0001200;Name=ENSG00000291034
HG002_chrY	CAT	exon	13285989	13286217	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001200;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001200;transcript_name=HG002_chrY_T0001200;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001200:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13286218	13314257	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001200;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001200;transcript_name=HG002_chrY_T0001200;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001200:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13314258	13314399	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001200;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001200;transcript_name=HG002_chrY_T0001200;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001200:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13314400	13327777	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001200;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001200;transcript_name=HG002_chrY_T0001200;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001200:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13327778	13327916	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001200;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001200;transcript_name=HG002_chrY_T0001200;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001200:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13327917	13328672	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001200;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001200;transcript_name=HG002_chrY_T0001200;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001200:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13328673	13328791	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001200;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001200;transcript_name=HG002_chrY_T0001200;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001200:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13286000	13329093	1000	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001201;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_G0000391;transcript_name=HG002_chrY_T0001201;gene_name=ENSG00000291034;ID=HG002_chrY_T0001201;Name=ENSG00000291034
HG002_chrY	CAT	exon	13286000	13286217	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001201;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001201;transcript_name=HG002_chrY_T0001201;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001201:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13286218	13289646	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001201;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001201;transcript_name=HG002_chrY_T0001201;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001201:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13289647	13289795	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001201;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001201;transcript_name=HG002_chrY_T0001201;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001201:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13289796	13314257	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001201;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001201;transcript_name=HG002_chrY_T0001201;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001201:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13314258	13314399	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001201;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001201;transcript_name=HG002_chrY_T0001201;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001201:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13314400	13327777	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001201;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001201;transcript_name=HG002_chrY_T0001201;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001201:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13327778	13327916	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001201;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001201;transcript_name=HG002_chrY_T0001201;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001201:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13327917	13329011	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001201;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001201;transcript_name=HG002_chrY_T0001201;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001201:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13329012	13329093	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001201;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001201;transcript_name=HG002_chrY_T0001201;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001201:4;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13286002	13329039	1000	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001202;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_G0000391;transcript_name=HG002_chrY_T0001202;gene_name=ENSG00000291034;ID=HG002_chrY_T0001202;Name=ENSG00000291034
HG002_chrY	CAT	exon	13286002	13286217	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001202;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001202;transcript_name=HG002_chrY_T0001202;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001202:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13286218	13306149	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001202;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001202;transcript_name=HG002_chrY_T0001202;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001202:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13306150	13306287	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001202;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001202;transcript_name=HG002_chrY_T0001202;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001202:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13306288	13314257	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001202;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001202;transcript_name=HG002_chrY_T0001202;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001202:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13314258	13314399	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001202;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001202;transcript_name=HG002_chrY_T0001202;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001202:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13314400	13327777	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001202;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001202;transcript_name=HG002_chrY_T0001202;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001202:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13327778	13327916	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001202;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001202;transcript_name=HG002_chrY_T0001202;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001202:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13327917	13329011	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001202;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001202;transcript_name=HG002_chrY_T0001202;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001202:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13329012	13329039	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001202;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001202;transcript_name=HG002_chrY_T0001202;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001202:4;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13286004	13328387	1000	-	.	source_transcript=ENST00000737335.1;source_transcript_name=ENST00000737335;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737335.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001203;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_G0000391;transcript_name=HG002_chrY_T0001203;gene_name=ENSG00000291034;ID=HG002_chrY_T0001203;Name=ENSG00000291034
HG002_chrY	CAT	exon	13286004	13286217	.	-	.	source_transcript=ENST00000737335.1;source_transcript_name=ENST00000737335;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001203;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001203;transcript_name=HG002_chrY_T0001203;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001203:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13286218	13314257	.	-	.	source_transcript=ENST00000737335.1;source_transcript_name=ENST00000737335;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001203;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001203;transcript_name=HG002_chrY_T0001203;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001203:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13314258	13314399	.	-	.	source_transcript=ENST00000737335.1;source_transcript_name=ENST00000737335;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001203;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001203;transcript_name=HG002_chrY_T0001203;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001203:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13314400	13327777	.	-	.	source_transcript=ENST00000737335.1;source_transcript_name=ENST00000737335;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001203;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001203;transcript_name=HG002_chrY_T0001203;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001203:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13327778	13327916	.	-	.	source_transcript=ENST00000737335.1;source_transcript_name=ENST00000737335;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001203;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001203;transcript_name=HG002_chrY_T0001203;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001203:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13327917	13328354	.	-	.	source_transcript=ENST00000737335.1;source_transcript_name=ENST00000737335;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001203;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001203;transcript_name=HG002_chrY_T0001203;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001203:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13328355	13328387	.	-	.	source_transcript=ENST00000737335.1;source_transcript_name=ENST00000737335;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001203;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001203;transcript_name=HG002_chrY_T0001203;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001203:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13286005	13328585	1000	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001204;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_G0000391;transcript_name=HG002_chrY_T0001204;gene_name=ENSG00000291034;ID=HG002_chrY_T0001204;Name=ENSG00000291034
HG002_chrY	CAT	exon	13286005	13286217	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001204;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001204;transcript_name=HG002_chrY_T0001204;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001204:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13286218	13314257	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001204;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001204;transcript_name=HG002_chrY_T0001204;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001204:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13314258	13314399	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001204;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001204;transcript_name=HG002_chrY_T0001204;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001204:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13314400	13327777	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001204;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001204;transcript_name=HG002_chrY_T0001204;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001204:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13327778	13327916	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001204;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001204;transcript_name=HG002_chrY_T0001204;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001204:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13327917	13328529	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001204;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001204;transcript_name=HG002_chrY_T0001204;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001204:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13328530	13328585	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001204;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001204;transcript_name=HG002_chrY_T0001204;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001204:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13286005	13327916	1000	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001205;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_G0000391;transcript_name=HG002_chrY_T0001205;gene_name=ENSG00000291034;ID=HG002_chrY_T0001205;Name=ENSG00000291034
HG002_chrY	CAT	exon	13286005	13286217	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001205;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001205;transcript_name=HG002_chrY_T0001205;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001205:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13286218	13289646	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001205;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001205;transcript_name=HG002_chrY_T0001205;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001205:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13289647	13289795	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001205;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001205;transcript_name=HG002_chrY_T0001205;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001205:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13289796	13313845	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001205;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001205;transcript_name=HG002_chrY_T0001205;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001205:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13313846	13313962	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001205;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001205;transcript_name=HG002_chrY_T0001205;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001205:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13313963	13314257	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001205;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001205;transcript_name=HG002_chrY_T0001205;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001205:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13314258	13314399	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001205;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001205;transcript_name=HG002_chrY_T0001205;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001205:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13314400	13327777	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001205;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001205;transcript_name=HG002_chrY_T0001205;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001205:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13327778	13327916	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001205;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001205;transcript_name=HG002_chrY_T0001205;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001205:4;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13286659	13339130	1000	-	.	source_transcript=ENST00000737329.1;source_transcript_name=ENST00000737329;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737329.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001206;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_G0000391;transcript_name=HG002_chrY_T0001206;gene_name=ENSG00000291034;ID=HG002_chrY_T0001206;Name=ENSG00000291034
HG002_chrY	CAT	exon	13286659	13287312	.	-	.	source_transcript=ENST00000737329.1;source_transcript_name=ENST00000737329;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001206;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001206;transcript_name=HG002_chrY_T0001206;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001206:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13287313	13314257	.	-	.	source_transcript=ENST00000737329.1;source_transcript_name=ENST00000737329;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001206;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001206;transcript_name=HG002_chrY_T0001206;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001206:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13314258	13314399	.	-	.	source_transcript=ENST00000737329.1;source_transcript_name=ENST00000737329;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001206;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001206;transcript_name=HG002_chrY_T0001206;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001206:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13314400	13314654	.	-	.	source_transcript=ENST00000737329.1;source_transcript_name=ENST00000737329;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001206;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001206;transcript_name=HG002_chrY_T0001206;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001206:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13314655	13314771	.	-	.	source_transcript=ENST00000737329.1;source_transcript_name=ENST00000737329;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001206;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001206;transcript_name=HG002_chrY_T0001206;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001206:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13314772	13339102	.	-	.	source_transcript=ENST00000737329.1;source_transcript_name=ENST00000737329;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001206;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001206;transcript_name=HG002_chrY_T0001206;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001206:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13339103	13339130	.	-	.	source_transcript=ENST00000737329.1;source_transcript_name=ENST00000737329;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001206;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001206;transcript_name=HG002_chrY_T0001206;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001206:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13290657	13325756	1000	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001207;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_G0000391;transcript_name=HG002_chrY_T0001207;gene_name=ENSG00000291034;ID=HG002_chrY_T0001207;Name=ENSG00000291034
HG002_chrY	CAT	exon	13290657	13290798	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001207;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001207;transcript_name=HG002_chrY_T0001207;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001207:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13290799	13306149	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001207;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001207;transcript_name=HG002_chrY_T0001207;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001207:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13306150	13306287	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001207;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001207;transcript_name=HG002_chrY_T0001207;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001207:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13306288	13314257	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001207;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001207;transcript_name=HG002_chrY_T0001207;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001207:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13314258	13314399	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001207;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001207;transcript_name=HG002_chrY_T0001207;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001207:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13314400	13314654	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001207;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001207;transcript_name=HG002_chrY_T0001207;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001207:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13314655	13314771	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001207;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001207;transcript_name=HG002_chrY_T0001207;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001207:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13314772	13325351	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001207;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001207;transcript_name=HG002_chrY_T0001207;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001207:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13325352	13325756	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001207;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001207;transcript_name=HG002_chrY_T0001207;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001207:4;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13309458	13329046	1000	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001208;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_G0000391;transcript_name=HG002_chrY_T0001208;gene_name=ENSG00000291034;ID=HG002_chrY_T0001208;Name=ENSG00000291034
HG002_chrY	CAT	exon	13309458	13310060	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001208;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001208;transcript_name=HG002_chrY_T0001208;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001208:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13310061	13314257	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001208;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001208;transcript_name=HG002_chrY_T0001208;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001208:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13314258	13314399	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001208;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001208;transcript_name=HG002_chrY_T0001208;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001208:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13314400	13327777	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001208;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001208;transcript_name=HG002_chrY_T0001208;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001208:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13327778	13327916	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001208;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001208;transcript_name=HG002_chrY_T0001208;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001208:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13327917	13329011	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001208;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001208;transcript_name=HG002_chrY_T0001208;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001208:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13329012	13329046	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001208;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001208;transcript_name=HG002_chrY_T0001208;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001208:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13309461	13328716	1000	-	.	source_transcript=ENST00000737338.1;source_transcript_name=ENST00000737338;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737338.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001209;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_G0000391;transcript_name=HG002_chrY_T0001209;gene_name=ENSG00000291034;ID=HG002_chrY_T0001209;Name=ENSG00000291034
HG002_chrY	CAT	exon	13309461	13310060	.	-	.	source_transcript=ENST00000737338.1;source_transcript_name=ENST00000737338;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737338.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001209;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001209;transcript_name=HG002_chrY_T0001209;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001209:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13310061	13314257	.	-	.	source_transcript=ENST00000737338.1;source_transcript_name=ENST00000737338;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737338.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001209;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001209;transcript_name=HG002_chrY_T0001209;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001209:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13314258	13314399	.	-	.	source_transcript=ENST00000737338.1;source_transcript_name=ENST00000737338;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737338.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001209;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001209;transcript_name=HG002_chrY_T0001209;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001209:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13314400	13327777	.	-	.	source_transcript=ENST00000737338.1;source_transcript_name=ENST00000737338;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737338.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001209;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001209;transcript_name=HG002_chrY_T0001209;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001209:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13327778	13327916	.	-	.	source_transcript=ENST00000737338.1;source_transcript_name=ENST00000737338;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737338.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001209;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001209;transcript_name=HG002_chrY_T0001209;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001209:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13327917	13328672	.	-	.	source_transcript=ENST00000737338.1;source_transcript_name=ENST00000737338;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737338.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001209;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001209;transcript_name=HG002_chrY_T0001209;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001209:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13328673	13328716	.	-	.	source_transcript=ENST00000737338.1;source_transcript_name=ENST00000737338;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737338.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001209;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001209;transcript_name=HG002_chrY_T0001209;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001209:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13309721	13327918	1000	-	.	source_transcript=ENST00000357871.6;source_transcript_name=ENST00000357871;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000357871.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000357871.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001210;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_G0000391;transcript_name=HG002_chrY_T0001210;gene_name=ENSG00000291034;ID=HG002_chrY_T0001210;Name=ENSG00000291034
HG002_chrY	CAT	exon	13309721	13310060	.	-	.	source_transcript=ENST00000357871.6;source_transcript_name=ENST00000357871;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000357871.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000357871.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001210;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001210;transcript_name=HG002_chrY_T0001210;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001210:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13310061	13314257	.	-	.	source_transcript=ENST00000357871.6;source_transcript_name=ENST00000357871;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000357871.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000357871.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001210;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001210;transcript_name=HG002_chrY_T0001210;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001210:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13314258	13314399	.	-	.	source_transcript=ENST00000357871.6;source_transcript_name=ENST00000357871;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000357871.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000357871.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001210;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001210;transcript_name=HG002_chrY_T0001210;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001210:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13314400	13327777	.	-	.	source_transcript=ENST00000357871.6;source_transcript_name=ENST00000357871;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000357871.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000357871.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001210;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001210;transcript_name=HG002_chrY_T0001210;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001210:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13327778	13327918	.	-	.	source_transcript=ENST00000357871.6;source_transcript_name=ENST00000357871;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000357871.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000357871.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001210;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001210;transcript_name=HG002_chrY_T0001210;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001210:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13313580	13328836	1000	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001211;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_G0000391;transcript_name=HG002_chrY_T0001211;gene_name=ENSG00000291034;ID=HG002_chrY_T0001211;Name=ENSG00000291034
HG002_chrY	CAT	exon	13313580	13313962	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001211;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001211;transcript_name=HG002_chrY_T0001211;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001211:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13313963	13314257	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001211;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001211;transcript_name=HG002_chrY_T0001211;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001211:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13314258	13314399	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001211;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001211;transcript_name=HG002_chrY_T0001211;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001211:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13314400	13327777	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001211;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001211;transcript_name=HG002_chrY_T0001211;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001211:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13327778	13327916	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001211;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001211;transcript_name=HG002_chrY_T0001211;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001211:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13327917	13328788	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001211;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001211;transcript_name=HG002_chrY_T0001211;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001211:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13328789	13328836	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001211;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001211;transcript_name=HG002_chrY_T0001211;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001211:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13313585	13327834	1000	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001212;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_G0000391;transcript_name=HG002_chrY_T0001212;gene_name=ENSG00000291034;ID=HG002_chrY_T0001212;Name=ENSG00000291034
HG002_chrY	CAT	exon	13313585	13313962	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001212;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001212;transcript_name=HG002_chrY_T0001212;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001212:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13313963	13314257	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001212;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001212;transcript_name=HG002_chrY_T0001212;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001212:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13314258	13314399	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001212;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001212;transcript_name=HG002_chrY_T0001212;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001212:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13314400	13314654	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001212;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001212;transcript_name=HG002_chrY_T0001212;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001212:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13314655	13314771	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001212;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001212;transcript_name=HG002_chrY_T0001212;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001212:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13314772	13327777	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001212;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001212;transcript_name=HG002_chrY_T0001212;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001212:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13327778	13327834	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001212;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001212;transcript_name=HG002_chrY_T0001212;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001212:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13332876	13339207	1000	-	.	source_transcript=ENST00000737340.1;source_transcript_name=ENST00000737340;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737340.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001214;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_G0000391;transcript_name=HG002_chrY_T0001214;gene_name=ENSG00000291034;ID=HG002_chrY_T0001214;Name=ENSG00000291034
HG002_chrY	CAT	exon	13332876	13333282	.	-	.	source_transcript=ENST00000737340.1;source_transcript_name=ENST00000737340;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737340.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001214;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001214;transcript_name=HG002_chrY_T0001214;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001214:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13333283	13339102	.	-	.	source_transcript=ENST00000737340.1;source_transcript_name=ENST00000737340;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737340.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001214;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001214;transcript_name=HG002_chrY_T0001214;gene_name=ENSG00000291034;ID=intron:HG002_chrY_T0001214:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13339103	13339207	.	-	.	source_transcript=ENST00000737340.1;source_transcript_name=ENST00000737340;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737340.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG002_chrY_T0001214;gene_id=HG002_chrY_G0000391;Parent=HG002_chrY_T0001214;transcript_name=HG002_chrY_T0001214;gene_name=ENSG00000291034;ID=exon:HG002_chrY_T0001214:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	13152025	13152730	.	+	.	source_gene_common_name=RPS24P1;source_gene=ENSG00000236477.1;alternative_source_transcripts=ENST00000438550.1,ENST00000438550.1;gene_id=HG002_chrY_G0000392;gene_biotype=processed_pseudogene;gene_name=RPS24P1;gene_sources=liftoff;ID=HG002_chrY_G0000392;Name=RPS24P1
HG002_chrY	CAT	transcript	13152025	13152730	1000	+	.	source_transcript=ENST00000438550.1;source_transcript_name=RPS24P1-201;source_gene=ENSG00000236477.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236477.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438550.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS24P1;alternative_source_transcripts=ENST00000438550.1,ENST00000438550.1;transcript_id=HG002_chrY_T0001181;gene_id=HG002_chrY_G0000392;Parent=HG002_chrY_G0000392;transcript_name=HG002_chrY_T0001181;gene_name=RPS24P1;ID=HG002_chrY_T0001181;Name=RPS24P1
HG002_chrY	CAT	exon	13152025	13152150	.	+	.	source_transcript=ENST00000438550.1;source_transcript_name=RPS24P1-201;source_gene=ENSG00000236477.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236477.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS24P1;alternative_source_transcripts=ENST00000438550.1,ENST00000438550.1;transcript_id=HG002_chrY_T0001181;gene_id=HG002_chrY_G0000392;Parent=HG002_chrY_T0001181;transcript_name=HG002_chrY_T0001181;gene_name=RPS24P1;ID=exon:HG002_chrY_T0001181:0;Name=RPS24P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13152151	13152485	.	+	.	source_transcript=ENST00000438550.1;source_transcript_name=RPS24P1-201;source_gene=ENSG00000236477.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236477.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS24P1;alternative_source_transcripts=ENST00000438550.1,ENST00000438550.1;transcript_id=HG002_chrY_T0001181;gene_id=HG002_chrY_G0000392;Parent=HG002_chrY_T0001181;transcript_name=HG002_chrY_T0001181;gene_name=RPS24P1;ID=intron:HG002_chrY_T0001181:0;Name=RPS24P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13152486	13152730	.	+	.	source_transcript=ENST00000438550.1;source_transcript_name=RPS24P1-201;source_gene=ENSG00000236477.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236477.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS24P1;alternative_source_transcripts=ENST00000438550.1,ENST00000438550.1;transcript_id=HG002_chrY_T0001181;gene_id=HG002_chrY_G0000392;Parent=HG002_chrY_T0001181;transcript_name=HG002_chrY_T0001181;gene_name=RPS24P1;ID=exon:HG002_chrY_T0001181:1;Name=RPS24P1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	13159594	13165306	.	-	.	source_gene_common_name=ARSFP1;source_gene=ENSG00000232226.2;gene_id=HG002_chrY_G0000393;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ARSFP1;gene_sources=liftoff;ID=HG002_chrY_G0000393;Name=ARSFP1
HG002_chrY	CAT	transcript	13159594	13165306	1000	-	.	source_transcript=ENST00000398758.2;source_transcript_name=ARSFP1-201;source_gene=ENSG00000232226.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232226.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000398758.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000398758.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSFP1;transcript_id=HG002_chrY_T0001182;gene_id=HG002_chrY_G0000393;Parent=HG002_chrY_G0000393;transcript_name=HG002_chrY_T0001182;gene_name=ARSFP1;ID=HG002_chrY_T0001182;Name=ARSFP1
HG002_chrY	CAT	exon	13159594	13159791	.	-	.	source_transcript=ENST00000398758.2;source_transcript_name=ARSFP1-201;source_gene=ENSG00000232226.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232226.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000398758.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000398758.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSFP1;transcript_id=HG002_chrY_T0001182;gene_id=HG002_chrY_G0000393;Parent=HG002_chrY_T0001182;transcript_name=HG002_chrY_T0001182;gene_name=ARSFP1;ID=exon:HG002_chrY_T0001182:0;Name=ARSFP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13159792	13161253	.	-	.	source_transcript=ENST00000398758.2;source_transcript_name=ARSFP1-201;source_gene=ENSG00000232226.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232226.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000398758.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000398758.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSFP1;transcript_id=HG002_chrY_T0001182;gene_id=HG002_chrY_G0000393;Parent=HG002_chrY_T0001182;transcript_name=HG002_chrY_T0001182;gene_name=ARSFP1;ID=intron:HG002_chrY_T0001182:0;Name=ARSFP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13161254	13161380	.	-	.	source_transcript=ENST00000398758.2;source_transcript_name=ARSFP1-201;source_gene=ENSG00000232226.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232226.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000398758.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000398758.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSFP1;transcript_id=HG002_chrY_T0001182;gene_id=HG002_chrY_G0000393;Parent=HG002_chrY_T0001182;transcript_name=HG002_chrY_T0001182;gene_name=ARSFP1;ID=exon:HG002_chrY_T0001182:1;Name=ARSFP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13161381	13165154	.	-	.	source_transcript=ENST00000398758.2;source_transcript_name=ARSFP1-201;source_gene=ENSG00000232226.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232226.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000398758.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000398758.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSFP1;transcript_id=HG002_chrY_T0001182;gene_id=HG002_chrY_G0000393;Parent=HG002_chrY_T0001182;transcript_name=HG002_chrY_T0001182;gene_name=ARSFP1;ID=intron:HG002_chrY_T0001182:1;Name=ARSFP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13165155	13165306	.	-	.	source_transcript=ENST00000398758.2;source_transcript_name=ARSFP1-201;source_gene=ENSG00000232226.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232226.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000398758.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000398758.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSFP1;transcript_id=HG002_chrY_T0001182;gene_id=HG002_chrY_G0000393;Parent=HG002_chrY_T0001182;transcript_name=HG002_chrY_T0001182;gene_name=ARSFP1;ID=exon:HG002_chrY_T0001182:2;Name=ARSFP1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	13180738	13181029	.	+	.	source_gene_common_name=RN7SL702P;source_gene=ENSG00000243980.3;alternative_source_transcripts=ENST00000488394.3,ENST00000488394.3;gene_id=HG002_chrY_G0000394;gene_biotype=misc_RNA;gene_name=RN7SL702P;gene_sources=liftoff;ID=HG002_chrY_G0000394;Name=RN7SL702P
HG002_chrY	CAT	transcript	13180738	13181029	1000	+	.	source_transcript=ENST00000488394.3;source_transcript_name=RN7SL702P-201;source_gene=ENSG00000243980.3;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000243980.3;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000488394.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000488394.3;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SL702P;alternative_source_transcripts=ENST00000488394.3,ENST00000488394.3;transcript_id=HG002_chrY_T0001183;gene_id=HG002_chrY_G0000394;Parent=HG002_chrY_G0000394;transcript_name=HG002_chrY_T0001183;gene_name=RN7SL702P;ID=HG002_chrY_T0001183;Name=RN7SL702P
HG002_chrY	CAT	exon	13180738	13181029	.	+	.	source_transcript=ENST00000488394.3;source_transcript_name=RN7SL702P-201;source_gene=ENSG00000243980.3;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000243980.3;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000488394.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000488394.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SL702P;alternative_source_transcripts=ENST00000488394.3,ENST00000488394.3;transcript_id=HG002_chrY_T0001183;gene_id=HG002_chrY_G0000394;Parent=HG002_chrY_T0001183;transcript_name=HG002_chrY_T0001183;gene_name=RN7SL702P;ID=exon:HG002_chrY_T0001183:0;Name=RN7SL702P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	13228898	13230110	.	+	.	source_gene_common_name=FAM8A4P;source_gene=ENSG00000232730.1;alternative_source_transcripts=ENST00000435433.1,ENST00000435433.1;gene_id=HG002_chrY_G0000395;gene_biotype=processed_pseudogene;gene_name=FAM8A4P;gene_sources=liftoff;ID=HG002_chrY_G0000395;Name=FAM8A4P
HG002_chrY	CAT	transcript	13228898	13230110	1000	+	.	source_transcript=ENST00000435433.1;source_transcript_name=FAM8A4P-201;source_gene=ENSG00000232730.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232730.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000435433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435433.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM8A4P;alternative_source_transcripts=ENST00000435433.1,ENST00000435433.1;transcript_id=HG002_chrY_T0001184;gene_id=HG002_chrY_G0000395;Parent=HG002_chrY_G0000395;transcript_name=HG002_chrY_T0001184;gene_name=FAM8A4P;ID=HG002_chrY_T0001184;Name=FAM8A4P
HG002_chrY	CAT	exon	13228898	13230110	.	+	.	source_transcript=ENST00000435433.1;source_transcript_name=FAM8A4P-201;source_gene=ENSG00000232730.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232730.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000435433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435433.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM8A4P;alternative_source_transcripts=ENST00000435433.1,ENST00000435433.1;transcript_id=HG002_chrY_T0001184;gene_id=HG002_chrY_G0000395;Parent=HG002_chrY_T0001184;transcript_name=HG002_chrY_T0001184;gene_name=FAM8A4P;ID=exon:HG002_chrY_T0001184:0;Name=FAM8A4P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	13234917	13254951	.	+	.	source_gene_common_name=ENSG00000290435;source_gene=ENSG00000290435.2;gene_id=HG002_chrY_G0000396;gene_biotype=lncRNA;gene_name=ENSG00000290435;gene_sources=liftoff;ID=HG002_chrY_G0000396;Name=ENSG00000290435
HG002_chrY	CAT	transcript	13234917	13254784	1000	+	.	source_transcript=ENST00000737467.1;source_transcript_name=ENST00000737467;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737467.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG002_chrY_T0001188;gene_id=HG002_chrY_G0000396;Parent=HG002_chrY_G0000396;transcript_name=HG002_chrY_T0001188;gene_name=ENSG00000290435;ID=HG002_chrY_T0001188;Name=ENSG00000290435
HG002_chrY	CAT	exon	13234917	13235318	.	+	.	source_transcript=ENST00000737467.1;source_transcript_name=ENST00000737467;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737467.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG002_chrY_T0001188;gene_id=HG002_chrY_G0000396;Parent=HG002_chrY_T0001188;transcript_name=HG002_chrY_T0001188;gene_name=ENSG00000290435;ID=exon:HG002_chrY_T0001188:0;Name=ENSG00000290435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13235319	13254404	.	+	.	source_transcript=ENST00000737467.1;source_transcript_name=ENST00000737467;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737467.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG002_chrY_T0001188;gene_id=HG002_chrY_G0000396;Parent=HG002_chrY_T0001188;transcript_name=HG002_chrY_T0001188;gene_name=ENSG00000290435;ID=intron:HG002_chrY_T0001188:0;Name=ENSG00000290435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13254405	13254784	.	+	.	source_transcript=ENST00000737467.1;source_transcript_name=ENST00000737467;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737467.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG002_chrY_T0001188;gene_id=HG002_chrY_G0000396;Parent=HG002_chrY_T0001188;transcript_name=HG002_chrY_T0001188;gene_name=ENSG00000290435;ID=exon:HG002_chrY_T0001188:1;Name=ENSG00000290435;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13235204	13247188	1000	+	.	source_transcript=ENST00000737469.1;source_transcript_name=ENST00000737469;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737469.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG002_chrY_T0001189;gene_id=HG002_chrY_G0000396;Parent=HG002_chrY_G0000396;transcript_name=HG002_chrY_T0001189;gene_name=ENSG00000290435;ID=HG002_chrY_T0001189;Name=ENSG00000290435
HG002_chrY	CAT	exon	13235204	13235318	.	+	.	source_transcript=ENST00000737469.1;source_transcript_name=ENST00000737469;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737469.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG002_chrY_T0001189;gene_id=HG002_chrY_G0000396;Parent=HG002_chrY_T0001189;transcript_name=HG002_chrY_T0001189;gene_name=ENSG00000290435;ID=exon:HG002_chrY_T0001189:0;Name=ENSG00000290435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13235319	13247085	.	+	.	source_transcript=ENST00000737469.1;source_transcript_name=ENST00000737469;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737469.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG002_chrY_T0001189;gene_id=HG002_chrY_G0000396;Parent=HG002_chrY_T0001189;transcript_name=HG002_chrY_T0001189;gene_name=ENSG00000290435;ID=intron:HG002_chrY_T0001189:0;Name=ENSG00000290435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13247086	13247188	.	+	.	source_transcript=ENST00000737469.1;source_transcript_name=ENST00000737469;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737469.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG002_chrY_T0001189;gene_id=HG002_chrY_G0000396;Parent=HG002_chrY_T0001189;transcript_name=HG002_chrY_T0001189;gene_name=ENSG00000290435;ID=exon:HG002_chrY_T0001189:1;Name=ENSG00000290435;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13239348	13254951	1000	+	.	source_transcript=ENST00000737468.1;source_transcript_name=ENST00000737468;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737468.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG002_chrY_T0001190;gene_id=HG002_chrY_G0000396;Parent=HG002_chrY_G0000396;transcript_name=HG002_chrY_T0001190;gene_name=ENSG00000290435;ID=HG002_chrY_T0001190;Name=ENSG00000290435
HG002_chrY	CAT	exon	13239348	13239567	.	+	.	source_transcript=ENST00000737468.1;source_transcript_name=ENST00000737468;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG002_chrY_T0001190;gene_id=HG002_chrY_G0000396;Parent=HG002_chrY_T0001190;transcript_name=HG002_chrY_T0001190;gene_name=ENSG00000290435;ID=exon:HG002_chrY_T0001190:0;Name=ENSG00000290435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13239568	13254404	.	+	.	source_transcript=ENST00000737468.1;source_transcript_name=ENST00000737468;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG002_chrY_T0001190;gene_id=HG002_chrY_G0000396;Parent=HG002_chrY_T0001190;transcript_name=HG002_chrY_T0001190;gene_name=ENSG00000290435;ID=intron:HG002_chrY_T0001190:0;Name=ENSG00000290435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13254405	13254951	.	+	.	source_transcript=ENST00000737468.1;source_transcript_name=ENST00000737468;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG002_chrY_T0001190;gene_id=HG002_chrY_G0000396;Parent=HG002_chrY_T0001190;transcript_name=HG002_chrY_T0001190;gene_name=ENSG00000290435;ID=exon:HG002_chrY_T0001190:1;Name=ENSG00000290435;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13252350	13254764	1000	+	.	source_transcript=ENST00000430152.1;source_transcript_name=ENST00000430152;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430152.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG002_chrY_T0001193;gene_id=HG002_chrY_G0000396;Parent=HG002_chrY_G0000396;transcript_name=HG002_chrY_T0001193;gene_name=ENSG00000290435;ID=HG002_chrY_T0001193;Name=ENSG00000290435
HG002_chrY	CAT	exon	13252350	13252488	.	+	.	source_transcript=ENST00000430152.1;source_transcript_name=ENST00000430152;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430152.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG002_chrY_T0001193;gene_id=HG002_chrY_G0000396;Parent=HG002_chrY_T0001193;transcript_name=HG002_chrY_T0001193;gene_name=ENSG00000290435;ID=exon:HG002_chrY_T0001193:0;Name=ENSG00000290435;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13252489	13254404	.	+	.	source_transcript=ENST00000430152.1;source_transcript_name=ENST00000430152;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430152.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG002_chrY_T0001193;gene_id=HG002_chrY_G0000396;Parent=HG002_chrY_T0001193;transcript_name=HG002_chrY_T0001193;gene_name=ENSG00000290435;ID=intron:HG002_chrY_T0001193:0;Name=ENSG00000290435;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13254405	13254764	.	+	.	source_transcript=ENST00000430152.1;source_transcript_name=ENST00000430152;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430152.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG002_chrY_T0001193;gene_id=HG002_chrY_G0000396;Parent=HG002_chrY_T0001193;transcript_name=HG002_chrY_T0001193;gene_name=ENSG00000290435;ID=exon:HG002_chrY_T0001193:1;Name=ENSG00000290435;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	13247086	13254756	.	+	.	source_gene_common_name=ARSLP1;source_gene=ENSG00000224060.4;gene_id=HG002_chrY_G0000397;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ARSLP1;gene_sources=liftoff;ID=HG002_chrY_G0000397;Name=ARSLP1
HG002_chrY	CAT	transcript	13247086	13254756	1000	+	.	source_transcript=ENST00000420443.1;source_transcript_name=ARSLP1-201;source_gene=ENSG00000224060.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224060.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420443.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSLP1;transcript_id=HG002_chrY_T0001192;gene_id=HG002_chrY_G0000397;Parent=HG002_chrY_G0000397;transcript_name=HG002_chrY_T0001192;gene_name=ARSLP1;ID=HG002_chrY_T0001192;Name=ARSLP1
HG002_chrY	CAT	exon	13247086	13247248	.	+	.	source_transcript=ENST00000420443.1;source_transcript_name=ARSLP1-201;source_gene=ENSG00000224060.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224060.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSLP1;transcript_id=HG002_chrY_T0001192;gene_id=HG002_chrY_G0000397;Parent=HG002_chrY_T0001192;transcript_name=HG002_chrY_T0001192;gene_name=ARSLP1;ID=exon:HG002_chrY_T0001192:0;Name=ARSLP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13247249	13248448	.	+	.	source_transcript=ENST00000420443.1;source_transcript_name=ARSLP1-201;source_gene=ENSG00000224060.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224060.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSLP1;transcript_id=HG002_chrY_T0001192;gene_id=HG002_chrY_G0000397;Parent=HG002_chrY_T0001192;transcript_name=HG002_chrY_T0001192;gene_name=ARSLP1;ID=intron:HG002_chrY_T0001192:0;Name=ARSLP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13248449	13248568	.	+	.	source_transcript=ENST00000420443.1;source_transcript_name=ARSLP1-201;source_gene=ENSG00000224060.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224060.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSLP1;transcript_id=HG002_chrY_T0001192;gene_id=HG002_chrY_G0000397;Parent=HG002_chrY_T0001192;transcript_name=HG002_chrY_T0001192;gene_name=ARSLP1;ID=exon:HG002_chrY_T0001192:1;Name=ARSLP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13248569	13254404	.	+	.	source_transcript=ENST00000420443.1;source_transcript_name=ARSLP1-201;source_gene=ENSG00000224060.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224060.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSLP1;transcript_id=HG002_chrY_T0001192;gene_id=HG002_chrY_G0000397;Parent=HG002_chrY_T0001192;transcript_name=HG002_chrY_T0001192;gene_name=ARSLP1;ID=intron:HG002_chrY_T0001192:1;Name=ARSLP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13254405	13254756	.	+	.	source_transcript=ENST00000420443.1;source_transcript_name=ARSLP1-201;source_gene=ENSG00000224060.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224060.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSLP1;transcript_id=HG002_chrY_T0001192;gene_id=HG002_chrY_G0000397;Parent=HG002_chrY_T0001192;transcript_name=HG002_chrY_T0001192;gene_name=ARSLP1;ID=exon:HG002_chrY_T0001192:2;Name=ARSLP1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	13261365	13294798	.	+	.	source_gene_common_name=ARSDP1;source_gene=ENSG00000225117.2;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;gene_id=HG002_chrY_G0000398;gene_biotype=unprocessed_pseudogene;gene_name=ARSDP1;gene_sources=liftoff;ID=HG002_chrY_G0000398;Name=ARSDP1
HG002_chrY	CAT	transcript	13261365	13294798	1000	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG002_chrY_T0001194;gene_id=HG002_chrY_G0000398;Parent=HG002_chrY_G0000398;transcript_name=HG002_chrY_T0001194;gene_name=ARSDP1;ID=HG002_chrY_T0001194;Name=ARSDP1
HG002_chrY	CAT	exon	13261365	13261407	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG002_chrY_T0001194;gene_id=HG002_chrY_G0000398;Parent=HG002_chrY_T0001194;transcript_name=HG002_chrY_T0001194;gene_name=ARSDP1;ID=exon:HG002_chrY_T0001194:0;Name=ARSDP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13261408	13269493	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG002_chrY_T0001194;gene_id=HG002_chrY_G0000398;Parent=HG002_chrY_T0001194;transcript_name=HG002_chrY_T0001194;gene_name=ARSDP1;ID=intron:HG002_chrY_T0001194:0;Name=ARSDP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13269494	13269643	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG002_chrY_T0001194;gene_id=HG002_chrY_G0000398;Parent=HG002_chrY_T0001194;transcript_name=HG002_chrY_T0001194;gene_name=ARSDP1;ID=exon:HG002_chrY_T0001194:1;Name=ARSDP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13269644	13273210	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG002_chrY_T0001194;gene_id=HG002_chrY_G0000398;Parent=HG002_chrY_T0001194;transcript_name=HG002_chrY_T0001194;gene_name=ARSDP1;ID=intron:HG002_chrY_T0001194:1;Name=ARSDP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13273211	13273332	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG002_chrY_T0001194;gene_id=HG002_chrY_G0000398;Parent=HG002_chrY_T0001194;transcript_name=HG002_chrY_T0001194;gene_name=ARSDP1;ID=exon:HG002_chrY_T0001194:2;Name=ARSDP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13273333	13274467	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG002_chrY_T0001194;gene_id=HG002_chrY_G0000398;Parent=HG002_chrY_T0001194;transcript_name=HG002_chrY_T0001194;gene_name=ARSDP1;ID=intron:HG002_chrY_T0001194:2;Name=ARSDP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13274468	13274589	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG002_chrY_T0001194;gene_id=HG002_chrY_G0000398;Parent=HG002_chrY_T0001194;transcript_name=HG002_chrY_T0001194;gene_name=ARSDP1;ID=exon:HG002_chrY_T0001194:3;Name=ARSDP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13274590	13281133	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG002_chrY_T0001194;gene_id=HG002_chrY_G0000398;Parent=HG002_chrY_T0001194;transcript_name=HG002_chrY_T0001194;gene_name=ARSDP1;ID=intron:HG002_chrY_T0001194:3;Name=ARSDP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13281134	13281548	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG002_chrY_T0001194;gene_id=HG002_chrY_G0000398;Parent=HG002_chrY_T0001194;transcript_name=HG002_chrY_T0001194;gene_name=ARSDP1;ID=exon:HG002_chrY_T0001194:4;Name=ARSDP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13281549	13285153	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG002_chrY_T0001194;gene_id=HG002_chrY_G0000398;Parent=HG002_chrY_T0001194;transcript_name=HG002_chrY_T0001194;gene_name=ARSDP1;ID=intron:HG002_chrY_T0001194:4;Name=ARSDP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13285154	13285290	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG002_chrY_T0001194;gene_id=HG002_chrY_G0000398;Parent=HG002_chrY_T0001194;transcript_name=HG002_chrY_T0001194;gene_name=ARSDP1;ID=exon:HG002_chrY_T0001194:5;Name=ARSDP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13285291	13289803	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG002_chrY_T0001194;gene_id=HG002_chrY_G0000398;Parent=HG002_chrY_T0001194;transcript_name=HG002_chrY_T0001194;gene_name=ARSDP1;ID=intron:HG002_chrY_T0001194:5;Name=ARSDP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13289804	13289937	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG002_chrY_T0001194;gene_id=HG002_chrY_G0000398;Parent=HG002_chrY_T0001194;transcript_name=HG002_chrY_T0001194;gene_name=ARSDP1;ID=exon:HG002_chrY_T0001194:6;Name=ARSDP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13289938	13290608	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG002_chrY_T0001194;gene_id=HG002_chrY_G0000398;Parent=HG002_chrY_T0001194;transcript_name=HG002_chrY_T0001194;gene_name=ARSDP1;ID=intron:HG002_chrY_T0001194:6;Name=ARSDP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13290609	13290771	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG002_chrY_T0001194;gene_id=HG002_chrY_G0000398;Parent=HG002_chrY_T0001194;transcript_name=HG002_chrY_T0001194;gene_name=ARSDP1;ID=exon:HG002_chrY_T0001194:7;Name=ARSDP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13290772	13291778	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG002_chrY_T0001194;gene_id=HG002_chrY_G0000398;Parent=HG002_chrY_T0001194;transcript_name=HG002_chrY_T0001194;gene_name=ARSDP1;ID=intron:HG002_chrY_T0001194:7;Name=ARSDP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13291779	13291900	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG002_chrY_T0001194;gene_id=HG002_chrY_G0000398;Parent=HG002_chrY_T0001194;transcript_name=HG002_chrY_T0001194;gene_name=ARSDP1;ID=exon:HG002_chrY_T0001194:8;Name=ARSDP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13291901	13294439	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG002_chrY_T0001194;gene_id=HG002_chrY_G0000398;Parent=HG002_chrY_T0001194;transcript_name=HG002_chrY_T0001194;gene_name=ARSDP1;ID=intron:HG002_chrY_T0001194:8;Name=ARSDP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13294440	13294798	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG002_chrY_T0001194;gene_id=HG002_chrY_G0000398;Parent=HG002_chrY_T0001194;transcript_name=HG002_chrY_T0001194;gene_name=ARSDP1;ID=exon:HG002_chrY_T0001194:9;Name=ARSDP1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	13314258	13327784	.	-	.	source_gene_common_name=GYG2P1;source_gene=ENSG00000206159.14;gene_id=HG002_chrY_G0000399;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=GYG2P1;gene_sources=liftoff;ID=HG002_chrY_G0000399;Name=GYG2P1
HG002_chrY	CAT	transcript	13314258	13327784	1000	-	.	source_transcript=ENST00000382965.4;source_transcript_name=GYG2P1-201;source_gene=ENSG00000206159.14;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000206159.14;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382965.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382965.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;transcript_id=HG002_chrY_T0001213;gene_id=HG002_chrY_G0000399;Parent=HG002_chrY_G0000399;transcript_name=HG002_chrY_T0001213;gene_name=GYG2P1;ID=HG002_chrY_T0001213;Name=GYG2P1
HG002_chrY	CAT	exon	13314258	13314399	.	-	.	source_transcript=ENST00000382965.4;source_transcript_name=GYG2P1-201;source_gene=ENSG00000206159.14;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000206159.14;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382965.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382965.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;transcript_id=HG002_chrY_T0001213;gene_id=HG002_chrY_G0000399;Parent=HG002_chrY_T0001213;transcript_name=HG002_chrY_T0001213;gene_name=GYG2P1;ID=exon:HG002_chrY_T0001213:0;Name=GYG2P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13314400	13327777	.	-	.	source_transcript=ENST00000382965.4;source_transcript_name=GYG2P1-201;source_gene=ENSG00000206159.14;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000206159.14;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382965.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382965.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;transcript_id=HG002_chrY_T0001213;gene_id=HG002_chrY_G0000399;Parent=HG002_chrY_T0001213;transcript_name=HG002_chrY_T0001213;gene_name=GYG2P1;ID=intron:HG002_chrY_T0001213:0;Name=GYG2P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13327778	13327784	.	-	.	source_transcript=ENST00000382965.4;source_transcript_name=GYG2P1-201;source_gene=ENSG00000206159.14;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000206159.14;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382965.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382965.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;transcript_id=HG002_chrY_T0001213;gene_id=HG002_chrY_G0000399;Parent=HG002_chrY_T0001213;transcript_name=HG002_chrY_T0001213;gene_name=GYG2P1;ID=exon:HG002_chrY_T0001213:1;Name=GYG2P1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	13347508	13414817	.	-	.	source_gene_common_name=XGY1;source_gene=ENSG00000227447.1;gene_id=HG002_chrY_G0000400;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=XGY1;gene_sources=liftoff;ID=HG002_chrY_G0000400;Name=XGY1
HG002_chrY	CAT	transcript	13347508	13414817	1000	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG002_chrY_T0001215;gene_id=HG002_chrY_G0000400;Parent=HG002_chrY_G0000400;transcript_name=HG002_chrY_T0001215;gene_name=XGY1;ID=HG002_chrY_T0001215;Name=XGY1
HG002_chrY	CAT	exon	13347508	13347624	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG002_chrY_T0001215;gene_id=HG002_chrY_G0000400;Parent=HG002_chrY_T0001215;transcript_name=HG002_chrY_T0001215;gene_name=XGY1;ID=exon:HG002_chrY_T0001215:0;Name=XGY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13347625	13350726	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG002_chrY_T0001215;gene_id=HG002_chrY_G0000400;Parent=HG002_chrY_T0001215;transcript_name=HG002_chrY_T0001215;gene_name=XGY1;ID=intron:HG002_chrY_T0001215:0;Name=XGY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13350727	13350762	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG002_chrY_T0001215;gene_id=HG002_chrY_G0000400;Parent=HG002_chrY_T0001215;transcript_name=HG002_chrY_T0001215;gene_name=XGY1;ID=exon:HG002_chrY_T0001215:1;Name=XGY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13350763	13363596	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG002_chrY_T0001215;gene_id=HG002_chrY_G0000400;Parent=HG002_chrY_T0001215;transcript_name=HG002_chrY_T0001215;gene_name=XGY1;ID=intron:HG002_chrY_T0001215:1;Name=XGY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13363597	13363647	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG002_chrY_T0001215;gene_id=HG002_chrY_G0000400;Parent=HG002_chrY_T0001215;transcript_name=HG002_chrY_T0001215;gene_name=XGY1;ID=exon:HG002_chrY_T0001215:2;Name=XGY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13363648	13367153	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG002_chrY_T0001215;gene_id=HG002_chrY_G0000400;Parent=HG002_chrY_T0001215;transcript_name=HG002_chrY_T0001215;gene_name=XGY1;ID=intron:HG002_chrY_T0001215:2;Name=XGY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13367154	13367211	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG002_chrY_T0001215;gene_id=HG002_chrY_G0000400;Parent=HG002_chrY_T0001215;transcript_name=HG002_chrY_T0001215;gene_name=XGY1;ID=exon:HG002_chrY_T0001215:3;Name=XGY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13367212	13375894	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG002_chrY_T0001215;gene_id=HG002_chrY_G0000400;Parent=HG002_chrY_T0001215;transcript_name=HG002_chrY_T0001215;gene_name=XGY1;ID=intron:HG002_chrY_T0001215:3;Name=XGY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13375895	13375957	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG002_chrY_T0001215;gene_id=HG002_chrY_G0000400;Parent=HG002_chrY_T0001215;transcript_name=HG002_chrY_T0001215;gene_name=XGY1;ID=exon:HG002_chrY_T0001215:4;Name=XGY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13375958	13392179	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG002_chrY_T0001215;gene_id=HG002_chrY_G0000400;Parent=HG002_chrY_T0001215;transcript_name=HG002_chrY_T0001215;gene_name=XGY1;ID=intron:HG002_chrY_T0001215:4;Name=XGY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13392180	13392203	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG002_chrY_T0001215;gene_id=HG002_chrY_G0000400;Parent=HG002_chrY_T0001215;transcript_name=HG002_chrY_T0001215;gene_name=XGY1;ID=exon:HG002_chrY_T0001215:5;Name=XGY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13392204	13395882	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG002_chrY_T0001215;gene_id=HG002_chrY_G0000400;Parent=HG002_chrY_T0001215;transcript_name=HG002_chrY_T0001215;gene_name=XGY1;ID=intron:HG002_chrY_T0001215:5;Name=XGY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13395883	13395918	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG002_chrY_T0001215;gene_id=HG002_chrY_G0000400;Parent=HG002_chrY_T0001215;transcript_name=HG002_chrY_T0001215;gene_name=XGY1;ID=exon:HG002_chrY_T0001215:6;Name=XGY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13395919	13414756	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG002_chrY_T0001215;gene_id=HG002_chrY_G0000400;Parent=HG002_chrY_T0001215;transcript_name=HG002_chrY_T0001215;gene_name=XGY1;ID=intron:HG002_chrY_T0001215:6;Name=XGY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13414757	13414817	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG002_chrY_T0001215;gene_id=HG002_chrY_G0000400;Parent=HG002_chrY_T0001215;transcript_name=HG002_chrY_T0001215;gene_name=XGY1;ID=exon:HG002_chrY_T0001215:7;Name=XGY1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	13386242	13415164	.	-	.	source_gene_common_name=ENSG00000296286;source_gene=ENSG00000296286.1;gene_id=HG002_chrY_G0000401;gene_biotype=lncRNA;gene_name=ENSG00000296286;gene_sources=liftoff;ID=HG002_chrY_G0000401;Name=ENSG00000296286
HG002_chrY	CAT	transcript	13386242	13415164	1000	-	.	source_transcript=ENST00000737822.1;source_transcript_name=ENST00000737822;source_gene=ENSG00000296286.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296286.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737822.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296286;transcript_id=HG002_chrY_T0001216;gene_id=HG002_chrY_G0000401;Parent=HG002_chrY_G0000401;transcript_name=HG002_chrY_T0001216;gene_name=ENSG00000296286;ID=HG002_chrY_T0001216;Name=ENSG00000296286
HG002_chrY	CAT	exon	13386242	13386737	.	-	.	source_transcript=ENST00000737822.1;source_transcript_name=ENST00000737822;source_gene=ENSG00000296286.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296286.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737822.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296286;transcript_id=HG002_chrY_T0001216;gene_id=HG002_chrY_G0000401;Parent=HG002_chrY_T0001216;transcript_name=HG002_chrY_T0001216;gene_name=ENSG00000296286;ID=exon:HG002_chrY_T0001216:0;Name=ENSG00000296286;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13386738	13392179	.	-	.	source_transcript=ENST00000737822.1;source_transcript_name=ENST00000737822;source_gene=ENSG00000296286.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296286.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737822.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296286;transcript_id=HG002_chrY_T0001216;gene_id=HG002_chrY_G0000401;Parent=HG002_chrY_T0001216;transcript_name=HG002_chrY_T0001216;gene_name=ENSG00000296286;ID=intron:HG002_chrY_T0001216:0;Name=ENSG00000296286;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13392180	13392203	.	-	.	source_transcript=ENST00000737822.1;source_transcript_name=ENST00000737822;source_gene=ENSG00000296286.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296286.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737822.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296286;transcript_id=HG002_chrY_T0001216;gene_id=HG002_chrY_G0000401;Parent=HG002_chrY_T0001216;transcript_name=HG002_chrY_T0001216;gene_name=ENSG00000296286;ID=exon:HG002_chrY_T0001216:1;Name=ENSG00000296286;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13392204	13414756	.	-	.	source_transcript=ENST00000737822.1;source_transcript_name=ENST00000737822;source_gene=ENSG00000296286.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296286.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737822.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296286;transcript_id=HG002_chrY_T0001216;gene_id=HG002_chrY_G0000401;Parent=HG002_chrY_T0001216;transcript_name=HG002_chrY_T0001216;gene_name=ENSG00000296286;ID=intron:HG002_chrY_T0001216:1;Name=ENSG00000296286;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13414757	13415164	.	-	.	source_transcript=ENST00000737822.1;source_transcript_name=ENST00000737822;source_gene=ENSG00000296286.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296286.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737822.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296286;transcript_id=HG002_chrY_T0001216;gene_id=HG002_chrY_G0000401;Parent=HG002_chrY_T0001216;transcript_name=HG002_chrY_T0001216;gene_name=ENSG00000296286;ID=exon:HG002_chrY_T0001216:2;Name=ENSG00000296286;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	13445298	13768947	.	+	.	source_gene_common_name=USP9Y;source_gene=ENSG00000114374.13;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;gene_id=HG002_chrY_G0000402;gene_biotype=protein_coding;gene_name=USP9Y;gene_sources=liftoff;ID=HG002_chrY_G0000402;Name=USP9Y
HG002_chrY	CAT	transcript	13445298	13616982	1000	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG002_chrY_T0001217;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_G0000402;transcript_name=HG002_chrY_T0001217;gene_name=USP9Y;ID=HG002_chrY_T0001217;Name=USP9Y
HG002_chrY	CAT	exon	13445298	13445655	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG002_chrY_T0001217;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001217;transcript_name=HG002_chrY_T0001217;gene_name=USP9Y;ID=exon:HG002_chrY_T0001217:0;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13445656	13452431	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG002_chrY_T0001217;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001217;transcript_name=HG002_chrY_T0001217;gene_name=USP9Y;ID=intron:HG002_chrY_T0001217:0;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13452432	13452586	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG002_chrY_T0001217;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001217;transcript_name=HG002_chrY_T0001217;gene_name=USP9Y;ID=exon:HG002_chrY_T0001217:1;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13452587	13453758	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG002_chrY_T0001217;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001217;transcript_name=HG002_chrY_T0001217;gene_name=USP9Y;ID=intron:HG002_chrY_T0001217:1;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13453759	13453898	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG002_chrY_T0001217;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001217;transcript_name=HG002_chrY_T0001217;gene_name=USP9Y;ID=exon:HG002_chrY_T0001217:2;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13453899	13570466	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG002_chrY_T0001217;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001217;transcript_name=HG002_chrY_T0001217;gene_name=USP9Y;ID=intron:HG002_chrY_T0001217:2;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13570467	13570817	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG002_chrY_T0001217;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001217;transcript_name=HG002_chrY_T0001217;gene_name=USP9Y;ID=exon:HG002_chrY_T0001217:3;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13570818	13572750	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG002_chrY_T0001217;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001217;transcript_name=HG002_chrY_T0001217;gene_name=USP9Y;ID=intron:HG002_chrY_T0001217:3;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13572751	13572797	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG002_chrY_T0001217;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001217;transcript_name=HG002_chrY_T0001217;gene_name=USP9Y;ID=exon:HG002_chrY_T0001217:4;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13572798	13594621	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG002_chrY_T0001217;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001217;transcript_name=HG002_chrY_T0001217;gene_name=USP9Y;ID=intron:HG002_chrY_T0001217:4;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13594622	13594715	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG002_chrY_T0001217;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001217;transcript_name=HG002_chrY_T0001217;gene_name=USP9Y;ID=exon:HG002_chrY_T0001217:5;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13594716	13598434	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG002_chrY_T0001217;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001217;transcript_name=HG002_chrY_T0001217;gene_name=USP9Y;ID=intron:HG002_chrY_T0001217:5;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13598435	13598550	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG002_chrY_T0001217;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001217;transcript_name=HG002_chrY_T0001217;gene_name=USP9Y;ID=exon:HG002_chrY_T0001217:6;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13598551	13610118	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG002_chrY_T0001217;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001217;transcript_name=HG002_chrY_T0001217;gene_name=USP9Y;ID=intron:HG002_chrY_T0001217:6;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13610119	13610164	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG002_chrY_T0001217;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001217;transcript_name=HG002_chrY_T0001217;gene_name=USP9Y;ID=exon:HG002_chrY_T0001217:7;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13610165	13615872	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG002_chrY_T0001217;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001217;transcript_name=HG002_chrY_T0001217;gene_name=USP9Y;ID=intron:HG002_chrY_T0001217:7;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13615873	13616982	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG002_chrY_T0001217;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001217;transcript_name=HG002_chrY_T0001217;gene_name=USP9Y;ID=exon:HG002_chrY_T0001217:8;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13570445	13600342	1000	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=HG002_chrY_T0001225;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_G0000402;transcript_name=HG002_chrY_T0001225;gene_name=USP9Y;ID=HG002_chrY_T0001225;Name=USP9Y
HG002_chrY	CAT	exon	13570445	13570817	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=HG002_chrY_T0001225;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001225;transcript_name=HG002_chrY_T0001225;gene_name=USP9Y;ID=exon:HG002_chrY_T0001225:0;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13570818	13572750	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=HG002_chrY_T0001225;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001225;transcript_name=HG002_chrY_T0001225;gene_name=USP9Y;ID=intron:HG002_chrY_T0001225:0;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13572751	13572797	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=HG002_chrY_T0001225;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001225;transcript_name=HG002_chrY_T0001225;gene_name=USP9Y;ID=exon:HG002_chrY_T0001225:1;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13572798	13594621	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=HG002_chrY_T0001225;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001225;transcript_name=HG002_chrY_T0001225;gene_name=USP9Y;ID=intron:HG002_chrY_T0001225:1;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13594622	13594715	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=HG002_chrY_T0001225;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001225;transcript_name=HG002_chrY_T0001225;gene_name=USP9Y;ID=exon:HG002_chrY_T0001225:2;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13594716	13595572	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=HG002_chrY_T0001225;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001225;transcript_name=HG002_chrY_T0001225;gene_name=USP9Y;ID=intron:HG002_chrY_T0001225:2;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13595573	13600342	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=HG002_chrY_T0001225;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001225;transcript_name=HG002_chrY_T0001225;gene_name=USP9Y;ID=exon:HG002_chrY_T0001225:3;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13570479	13768910	100	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_G0000402;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=HG002_chrY_T0001226;Name=USP9Y
HG002_chrY	CAT	exon	13570479	13570817	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:0;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13570818	13572750	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:0;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13572751	13572797	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:1;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13572798	13594621	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:1;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13594622	13594715	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:2;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13594716	13610118	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:2;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13610119	13610164	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:3;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13610165	13617500	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:3;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13617501	13617656	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:4;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13617561	13617656	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:0;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	13617561	13617563	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=start_codon:HG002_chrY_T0001226;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13617657	13628702	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:4;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13628703	13628851	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:5;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13628703	13628851	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:1;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13628852	13630220	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:5;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13630221	13630300	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:6;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13630221	13630300	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:2;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13630301	13633225	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:6;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13633226	13633338	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:7;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13633226	13633338	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:3;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13633339	13634687	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:7;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13634688	13634906	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:8;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13634688	13634906	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:4;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13634907	13643724	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:8;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13643725	13643840	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:9;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13643725	13643840	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:5;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13643841	13644110	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:9;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13644111	13644362	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:10;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13644111	13644362	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:6;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13644363	13644523	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:10;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13644524	13644662	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:11;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13644524	13644662	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:7;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13644663	13646269	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:11;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13646270	13646422	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:12;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13646270	13646422	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:8;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13646423	13647637	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:12;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13647638	13647742	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:13;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13647638	13647742	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:9;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13647743	13665304	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:13;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13665305	13665511	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:14;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13665305	13665511	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:10;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13665512	13666618	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:14;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13666619	13666755	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:15;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13666619	13666755	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:11;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13666756	13668596	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:15;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13668597	13668730	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:16;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13668597	13668730	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:12;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13668731	13679181	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:16;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13679182	13679269	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:17;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13679182	13679269	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:13;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13679270	13681696	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:17;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13681697	13682039	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:18;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13681697	13682039	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:14;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13682040	13683584	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:18;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13683585	13683680	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:19;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13683585	13683680	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:15;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13683681	13684762	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:19;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13684763	13684974	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:20;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13684763	13684974	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:16;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13684975	13686132	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:20;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13686133	13686373	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:21;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13686133	13686373	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:17;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13686374	13686719	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:21;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13686720	13686869	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:22;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13686720	13686869	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:18;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13686870	13687639	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:22;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13687640	13687760	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:23;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13687640	13687760	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:19;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13687761	13694316	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:23;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13694317	13694447	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:24;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13694317	13694447	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:20;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13694448	13694634	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:24;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13694635	13694913	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:25;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13694635	13694913	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:21;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13694914	13698519	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:25;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13698520	13698645	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:26;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13698520	13698645	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:22;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13698646	13699611	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:26;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13699612	13699737	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:27;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13699612	13699737	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:23;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13699738	13701144	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:27;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13701145	13701314	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:28;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13701145	13701314	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:24;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13701315	13718291	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:28;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13718292	13718400	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:29;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13718292	13718400	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:25;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13718401	13718784	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:29;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13718785	13718931	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:30;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13718785	13718931	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:26;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13718932	13719747	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:30;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13719748	13719894	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:31;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13719748	13719894	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:27;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13719895	13720942	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:31;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13720943	13721165	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:32;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13720943	13721165	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:28;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13721166	13724236	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:32;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13724237	13724457	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:33;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13724237	13724457	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:29;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13724458	13726532	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:33;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13726533	13726723	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:34;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13726533	13726723	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:30;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13726724	13741797	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:34;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13741798	13741971	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:35;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13741798	13741971	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:31;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13741972	13746020	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:35;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13746021	13746162	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:36;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13746021	13746162	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:32;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13746163	13747973	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:36;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13747974	13748724	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:37;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13747974	13748724	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:33;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13748725	13749119	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:37;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13749120	13749243	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:38;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13749120	13749243	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:34;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13749244	13750347	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:38;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13750348	13750573	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:39;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13750348	13750573	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:35;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13750574	13751171	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:39;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13751172	13751301	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:40;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13751172	13751301	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:36;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13751302	13754440	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:40;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13754441	13754626	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:41;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13754441	13754626	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:37;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13754627	13755040	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:41;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13755041	13755261	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:42;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13755041	13755261	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:38;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13755262	13755346	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:42;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13755347	13755435	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:43;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13755347	13755435	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:39;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13755436	13764447	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:43;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13764448	13764604	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:44;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13764448	13764604	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:40;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13764605	13764740	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:44;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13764741	13764953	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:45;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13764741	13764953	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:41;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13764954	13765673	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:45;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13765674	13765769	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:46;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13765674	13765769	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:42;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13765770	13767386	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=intron:HG002_chrY_T0001226:46;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13767387	13768910	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=exon:HG002_chrY_T0001226:47;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13767387	13767524	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001226:43;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	13767522	13767524	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG002_chrY_T0001226;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001226;transcript_name=HG002_chrY_T0001226;gene_name=USP9Y;ID=stop_codon:HG002_chrY_T0001226;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13570648	13596364	1000	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=HG002_chrY_T0001227;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_G0000402;transcript_name=HG002_chrY_T0001227;gene_name=USP9Y;ID=HG002_chrY_T0001227;Name=USP9Y
HG002_chrY	CAT	exon	13570648	13570817	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=HG002_chrY_T0001227;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001227;transcript_name=HG002_chrY_T0001227;gene_name=USP9Y;ID=exon:HG002_chrY_T0001227:0;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13570818	13572750	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=HG002_chrY_T0001227;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001227;transcript_name=HG002_chrY_T0001227;gene_name=USP9Y;ID=intron:HG002_chrY_T0001227:0;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13572751	13572797	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=HG002_chrY_T0001227;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001227;transcript_name=HG002_chrY_T0001227;gene_name=USP9Y;ID=exon:HG002_chrY_T0001227:1;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13572798	13594621	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=HG002_chrY_T0001227;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001227;transcript_name=HG002_chrY_T0001227;gene_name=USP9Y;ID=intron:HG002_chrY_T0001227:1;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13594622	13594715	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=HG002_chrY_T0001227;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001227;transcript_name=HG002_chrY_T0001227;gene_name=USP9Y;ID=exon:HG002_chrY_T0001227:2;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13594716	13595793	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=HG002_chrY_T0001227;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001227;transcript_name=HG002_chrY_T0001227;gene_name=USP9Y;ID=intron:HG002_chrY_T0001227:2;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13595794	13596364	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=HG002_chrY_T0001227;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001227;transcript_name=HG002_chrY_T0001227;gene_name=USP9Y;ID=exon:HG002_chrY_T0001227:3;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13609340	13768947	100	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_G0000402;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=HG002_chrY_T0001228;Name=USP9Y
HG002_chrY	CAT	exon	13609340	13610164	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:0;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13610165	13616746	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:0;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13616747	13616806	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:1;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13616807	13617500	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:1;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13617501	13617656	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:2;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13617561	13617656	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:0;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	13617561	13617563	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=start_codon:HG002_chrY_T0001228;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13617657	13628702	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:2;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13628703	13628851	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:3;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13628703	13628851	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:1;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13628852	13630220	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:3;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13630221	13630300	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:4;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13630221	13630300	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:2;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13630301	13633225	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:4;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13633226	13633338	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:5;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13633226	13633338	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:3;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13633339	13634687	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:5;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13634688	13634906	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:6;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13634688	13634906	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:4;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13634907	13643724	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:6;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13643725	13643840	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:7;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13643725	13643840	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:5;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13643841	13644110	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:7;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13644111	13644362	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:8;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13644111	13644362	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:6;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13644363	13644523	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:8;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13644524	13644662	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:9;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13644524	13644662	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:7;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13644663	13646269	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:9;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13646270	13646422	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:10;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13646270	13646422	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:8;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13646423	13647637	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:10;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13647638	13647742	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:11;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13647638	13647742	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:9;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13647743	13665304	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:11;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13665305	13665511	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:12;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13665305	13665511	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:10;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13665512	13666618	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:12;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13666619	13666755	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:13;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13666619	13666755	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:11;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13666756	13668596	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:13;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13668597	13668730	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:14;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13668597	13668730	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:12;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13668731	13679181	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:14;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13679182	13679269	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:15;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13679182	13679269	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:13;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13679270	13681696	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:15;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13681697	13682039	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:16;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13681697	13682039	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:14;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13682040	13683584	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:16;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13683585	13683680	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:17;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13683585	13683680	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:15;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13683681	13684762	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:17;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13684763	13684974	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:18;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13684763	13684974	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:16;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13684975	13686132	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:18;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13686133	13686373	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:19;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13686133	13686373	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:17;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13686374	13686719	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:19;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13686720	13686869	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:20;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13686720	13686869	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:18;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13686870	13687639	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:20;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13687640	13687760	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:21;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13687640	13687760	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:19;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13687761	13694316	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:21;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13694317	13694447	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:22;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13694317	13694447	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:20;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13694448	13694634	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:22;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13694635	13694913	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:23;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13694635	13694913	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:21;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13694914	13698519	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:23;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13698520	13698645	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:24;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13698520	13698645	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:22;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13698646	13699611	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:24;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13699612	13699737	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:25;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13699612	13699737	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:23;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13699738	13701144	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:25;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13701145	13701314	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:26;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13701145	13701314	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:24;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13701315	13718291	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:26;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13718292	13718400	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:27;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13718292	13718400	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:25;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13718401	13718784	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:27;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13718785	13718931	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:28;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13718785	13718931	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:26;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13718932	13719747	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:28;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13719748	13719894	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:29;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13719748	13719894	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:27;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13719895	13720942	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:29;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13720943	13721165	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:30;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13720943	13721165	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:28;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13721166	13724236	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:30;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13724237	13724457	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:31;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13724237	13724457	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:29;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13724458	13726532	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:31;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13726533	13726723	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:32;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13726533	13726723	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:30;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13726724	13741797	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:32;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13741798	13741971	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:33;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13741798	13741971	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:31;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13741972	13746020	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:33;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13746021	13746162	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:34;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13746021	13746162	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:32;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13746163	13747973	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:34;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13747974	13748724	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:35;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13747974	13748724	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:33;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13748725	13749119	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:35;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13749120	13749243	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:36;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13749120	13749243	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:34;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13749244	13750347	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:36;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13750348	13750573	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:37;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13750348	13750573	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:35;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13750574	13751171	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:37;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13751172	13751301	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:38;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13751172	13751301	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:36;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13751302	13754440	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:38;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13754441	13754626	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:39;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13754441	13754626	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:37;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13754627	13755040	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:39;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13755041	13755261	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:40;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13755041	13755261	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:38;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13755262	13755346	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:40;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13755347	13755435	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:41;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13755347	13755435	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:39;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13755436	13764447	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:41;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13764448	13764604	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:42;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13764448	13764604	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:40;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13764605	13764740	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:42;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13764741	13764953	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:43;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13764741	13764953	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:41;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13764954	13765673	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:43;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13765674	13765769	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:44;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13765674	13765769	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:42;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13765770	13767386	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=intron:HG002_chrY_T0001228:44;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13767387	13768947	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=exon:HG002_chrY_T0001228:45;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13767387	13767524	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001228:43;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	13767522	13767524	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG002_chrY_T0001228;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001228;transcript_name=HG002_chrY_T0001228;gene_name=USP9Y;ID=stop_codon:HG002_chrY_T0001228;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13610149	13629317	1000	+	.	source_transcript=ENST00000493168.1;source_transcript_name=USP9Y-208;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493168.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000493168.1,ENST00000493168.1;transcript_id=HG002_chrY_T0001229;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_G0000402;transcript_name=HG002_chrY_T0001229;gene_name=USP9Y;ID=HG002_chrY_T0001229;Name=USP9Y
HG002_chrY	CAT	exon	13610149	13610164	.	+	.	source_transcript=ENST00000493168.1;source_transcript_name=USP9Y-208;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493168.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000493168.1,ENST00000493168.1;transcript_id=HG002_chrY_T0001229;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001229;transcript_name=HG002_chrY_T0001229;gene_name=USP9Y;ID=exon:HG002_chrY_T0001229:0;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13610165	13617500	.	+	.	source_transcript=ENST00000493168.1;source_transcript_name=USP9Y-208;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493168.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000493168.1,ENST00000493168.1;transcript_id=HG002_chrY_T0001229;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001229;transcript_name=HG002_chrY_T0001229;gene_name=USP9Y;ID=intron:HG002_chrY_T0001229:0;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13617501	13617656	.	+	.	source_transcript=ENST00000493168.1;source_transcript_name=USP9Y-208;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493168.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000493168.1,ENST00000493168.1;transcript_id=HG002_chrY_T0001229;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001229;transcript_name=HG002_chrY_T0001229;gene_name=USP9Y;ID=exon:HG002_chrY_T0001229:1;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13617657	13628702	.	+	.	source_transcript=ENST00000493168.1;source_transcript_name=USP9Y-208;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493168.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000493168.1,ENST00000493168.1;transcript_id=HG002_chrY_T0001229;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001229;transcript_name=HG002_chrY_T0001229;gene_name=USP9Y;ID=intron:HG002_chrY_T0001229:1;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13628703	13629317	.	+	.	source_transcript=ENST00000493168.1;source_transcript_name=USP9Y-208;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493168.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000493168.1,ENST00000493168.1;transcript_id=HG002_chrY_T0001229;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001229;transcript_name=HG002_chrY_T0001229;gene_name=USP9Y;ID=exon:HG002_chrY_T0001229:2;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13617549	13768947	1000	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_G0000402;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=HG002_chrY_T0001230;Name=USP9Y
HG002_chrY	CAT	exon	13617549	13617656	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:0;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13617657	13628702	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:0;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13628703	13628851	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:1;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13628852	13630220	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:1;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13630221	13630300	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:2;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13630301	13633225	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:2;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13633226	13633338	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:3;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13633339	13634687	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:3;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13634688	13634906	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:4;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13634907	13643724	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:4;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13643725	13643840	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:5;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13643841	13644110	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:5;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13644111	13644362	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:6;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13644363	13644523	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:6;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13644524	13644662	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:7;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13644663	13646269	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:7;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13646270	13646422	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:8;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13646423	13647637	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:8;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13647638	13647742	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:9;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13647743	13665304	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:9;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13665305	13665511	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:10;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13665512	13666618	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:10;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13666619	13666755	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:11;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13666756	13668596	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:11;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13668597	13668730	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:12;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13668731	13679181	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:12;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13679182	13679269	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:13;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13679270	13681696	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:13;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13681697	13682039	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:14;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13682040	13683584	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:14;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13683585	13683680	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:15;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13683681	13684762	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:15;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13684763	13684974	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:16;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13684975	13686132	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:16;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13686133	13686373	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:17;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13686374	13686719	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:17;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13686720	13686869	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:18;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13686870	13687639	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:18;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13687640	13687760	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:19;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13687761	13694316	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:19;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13694317	13694447	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:20;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13694448	13694634	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:20;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13694635	13694913	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:21;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13694914	13698519	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:21;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13698520	13698645	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:22;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13698646	13699611	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:22;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13699612	13699737	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:23;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13699738	13701144	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:23;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13701145	13701314	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:24;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13701315	13718291	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:24;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13718292	13718400	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:25;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13718401	13718784	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:25;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13718785	13718931	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:26;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13718932	13719747	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:26;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13719748	13719894	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:27;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13719895	13720942	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:27;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13720943	13721165	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:28;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13721166	13724236	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:28;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13724237	13724457	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:29;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13724458	13726532	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:29;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13726533	13726723	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:30;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13726724	13741797	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:30;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13741798	13741971	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:31;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13741972	13746020	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:31;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13746021	13746162	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:32;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13746163	13747973	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:32;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13747974	13748724	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:33;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13748725	13749119	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:33;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13749120	13749243	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:34;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13749244	13750332	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:34;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13750333	13750573	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:35;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13750574	13751171	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:35;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13751172	13751301	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:36;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13751302	13754440	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:36;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13754441	13754626	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:37;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13754627	13755040	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:37;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13755041	13755261	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:38;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13755262	13755346	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:38;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13755347	13755435	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:39;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13755436	13764447	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:39;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13764448	13764604	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:40;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13764605	13764740	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:40;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13764741	13764953	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:41;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13764954	13765673	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:41;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13765674	13765769	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:42;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13765770	13767386	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=intron:HG002_chrY_T0001230:42;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13767387	13768947	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG002_chrY_T0001230;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001230;transcript_name=HG002_chrY_T0001230;gene_name=USP9Y;ID=exon:HG002_chrY_T0001230:43;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13755153	13767720	100	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG002_chrY_T0001232;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_G0000402;transcript_name=HG002_chrY_T0001232;gene_name=USP9Y;ID=HG002_chrY_T0001232;Name=USP9Y
HG002_chrY	CAT	exon	13755153	13755261	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG002_chrY_T0001232;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001232;transcript_name=HG002_chrY_T0001232;gene_name=USP9Y;ID=exon:HG002_chrY_T0001232:0;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13755153	13755261	.	+	2	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG002_chrY_T0001232;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001232;transcript_name=HG002_chrY_T0001232;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001232:0;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13755262	13764447	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG002_chrY_T0001232;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001232;transcript_name=HG002_chrY_T0001232;gene_name=USP9Y;ID=intron:HG002_chrY_T0001232:0;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13764448	13764604	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG002_chrY_T0001232;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001232;transcript_name=HG002_chrY_T0001232;gene_name=USP9Y;ID=exon:HG002_chrY_T0001232:1;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13764448	13764604	.	+	1	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG002_chrY_T0001232;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001232;transcript_name=HG002_chrY_T0001232;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001232:1;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13764605	13764740	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG002_chrY_T0001232;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001232;transcript_name=HG002_chrY_T0001232;gene_name=USP9Y;ID=intron:HG002_chrY_T0001232:1;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13764741	13764953	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG002_chrY_T0001232;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001232;transcript_name=HG002_chrY_T0001232;gene_name=USP9Y;ID=exon:HG002_chrY_T0001232:2;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13764741	13764953	.	+	0	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG002_chrY_T0001232;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001232;transcript_name=HG002_chrY_T0001232;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001232:2;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13764954	13765673	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG002_chrY_T0001232;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001232;transcript_name=HG002_chrY_T0001232;gene_name=USP9Y;ID=intron:HG002_chrY_T0001232:2;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13765674	13765769	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG002_chrY_T0001232;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001232;transcript_name=HG002_chrY_T0001232;gene_name=USP9Y;ID=exon:HG002_chrY_T0001232:3;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13765674	13765769	.	+	0	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG002_chrY_T0001232;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001232;transcript_name=HG002_chrY_T0001232;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001232:3;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13765770	13767386	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG002_chrY_T0001232;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001232;transcript_name=HG002_chrY_T0001232;gene_name=USP9Y;ID=intron:HG002_chrY_T0001232:3;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13767387	13767720	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG002_chrY_T0001232;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001232;transcript_name=HG002_chrY_T0001232;gene_name=USP9Y;ID=exon:HG002_chrY_T0001232:4;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13767387	13767524	.	+	0	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG002_chrY_T0001232;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001232;transcript_name=HG002_chrY_T0001232;gene_name=USP9Y;ID=CDS:HG002_chrY_T0001232:4;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	13767522	13767524	.	+	0	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG002_chrY_T0001232;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001232;transcript_name=HG002_chrY_T0001232;gene_name=USP9Y;ID=stop_codon:HG002_chrY_T0001232;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13764921	13768947	1000	+	.	source_transcript=ENST00000471409.1;source_transcript_name=USP9Y-207;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471409.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471409.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000471409.1,ENST00000471409.1;transcript_id=HG002_chrY_T0001233;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_G0000402;transcript_name=HG002_chrY_T0001233;gene_name=USP9Y;ID=HG002_chrY_T0001233;Name=USP9Y
HG002_chrY	CAT	exon	13764921	13765769	.	+	.	source_transcript=ENST00000471409.1;source_transcript_name=USP9Y-207;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471409.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471409.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000471409.1,ENST00000471409.1;transcript_id=HG002_chrY_T0001233;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001233;transcript_name=HG002_chrY_T0001233;gene_name=USP9Y;ID=exon:HG002_chrY_T0001233:0;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13765770	13767386	.	+	.	source_transcript=ENST00000471409.1;source_transcript_name=USP9Y-207;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471409.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471409.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000471409.1,ENST00000471409.1;transcript_id=HG002_chrY_T0001233;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001233;transcript_name=HG002_chrY_T0001233;gene_name=USP9Y;ID=intron:HG002_chrY_T0001233:0;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13767387	13768947	.	+	.	source_transcript=ENST00000471409.1;source_transcript_name=USP9Y-207;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471409.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471409.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000471409.1,ENST00000471409.1;transcript_id=HG002_chrY_T0001233;gene_id=HG002_chrY_G0000402;Parent=HG002_chrY_T0001233;transcript_name=HG002_chrY_T0001233;gene_name=USP9Y;ID=exon:HG002_chrY_T0001233:1;Name=USP9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	13445421	13452531	.	+	.	source_gene_common_name=SHROOM2P1;source_gene=ENSG00000226863.1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;gene_id=HG002_chrY_G0000403;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=SHROOM2P1;gene_sources=liftoff;ID=HG002_chrY_G0000403;Name=SHROOM2P1
HG002_chrY	CAT	transcript	13445421	13452531	1000	+	.	source_transcript=ENST00000434773.1;source_transcript_name=SHROOM2P1-201;source_gene=ENSG00000226863.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226863.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434773.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHROOM2P1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;transcript_id=HG002_chrY_T0001218;gene_id=HG002_chrY_G0000403;Parent=HG002_chrY_G0000403;transcript_name=HG002_chrY_T0001218;gene_name=SHROOM2P1;ID=HG002_chrY_T0001218;Name=SHROOM2P1
HG002_chrY	CAT	exon	13445421	13445549	.	+	.	source_transcript=ENST00000434773.1;source_transcript_name=SHROOM2P1-201;source_gene=ENSG00000226863.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226863.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434773.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHROOM2P1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;transcript_id=HG002_chrY_T0001218;gene_id=HG002_chrY_G0000403;Parent=HG002_chrY_T0001218;transcript_name=HG002_chrY_T0001218;gene_name=SHROOM2P1;ID=exon:HG002_chrY_T0001218:0;Name=SHROOM2P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13445550	13448707	.	+	.	source_transcript=ENST00000434773.1;source_transcript_name=SHROOM2P1-201;source_gene=ENSG00000226863.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226863.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434773.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHROOM2P1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;transcript_id=HG002_chrY_T0001218;gene_id=HG002_chrY_G0000403;Parent=HG002_chrY_T0001218;transcript_name=HG002_chrY_T0001218;gene_name=SHROOM2P1;ID=intron:HG002_chrY_T0001218:0;Name=SHROOM2P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13448708	13450862	.	+	.	source_transcript=ENST00000434773.1;source_transcript_name=SHROOM2P1-201;source_gene=ENSG00000226863.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226863.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434773.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHROOM2P1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;transcript_id=HG002_chrY_T0001218;gene_id=HG002_chrY_G0000403;Parent=HG002_chrY_T0001218;transcript_name=HG002_chrY_T0001218;gene_name=SHROOM2P1;ID=exon:HG002_chrY_T0001218:1;Name=SHROOM2P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13450863	13452431	.	+	.	source_transcript=ENST00000434773.1;source_transcript_name=SHROOM2P1-201;source_gene=ENSG00000226863.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226863.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434773.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHROOM2P1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;transcript_id=HG002_chrY_T0001218;gene_id=HG002_chrY_G0000403;Parent=HG002_chrY_T0001218;transcript_name=HG002_chrY_T0001218;gene_name=SHROOM2P1;ID=intron:HG002_chrY_T0001218:1;Name=SHROOM2P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13452432	13452531	.	+	.	source_transcript=ENST00000434773.1;source_transcript_name=SHROOM2P1-201;source_gene=ENSG00000226863.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226863.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434773.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHROOM2P1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;transcript_id=HG002_chrY_T0001218;gene_id=HG002_chrY_G0000403;Parent=HG002_chrY_T0001218;transcript_name=HG002_chrY_T0001218;gene_name=SHROOM2P1;ID=exon:HG002_chrY_T0001218:2;Name=SHROOM2P1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	13526632	13542050	.	-	.	source_gene_common_name=MED14P1;source_gene=ENSG00000233774.1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;gene_id=HG002_chrY_G0000404;gene_biotype=unprocessed_pseudogene;gene_name=MED14P1;gene_sources=liftoff;ID=HG002_chrY_G0000404;Name=MED14P1
HG002_chrY	CAT	transcript	13526632	13542050	1000	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=HG002_chrY_T0001219;gene_id=HG002_chrY_G0000404;Parent=HG002_chrY_G0000404;transcript_name=HG002_chrY_T0001219;gene_name=MED14P1;ID=HG002_chrY_T0001219;Name=MED14P1
HG002_chrY	CAT	exon	13526632	13526772	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=HG002_chrY_T0001219;gene_id=HG002_chrY_G0000404;Parent=HG002_chrY_T0001219;transcript_name=HG002_chrY_T0001219;gene_name=MED14P1;ID=exon:HG002_chrY_T0001219:0;Name=MED14P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13526773	13527274	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=HG002_chrY_T0001219;gene_id=HG002_chrY_G0000404;Parent=HG002_chrY_T0001219;transcript_name=HG002_chrY_T0001219;gene_name=MED14P1;ID=intron:HG002_chrY_T0001219:0;Name=MED14P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13527275	13527382	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=HG002_chrY_T0001219;gene_id=HG002_chrY_G0000404;Parent=HG002_chrY_T0001219;transcript_name=HG002_chrY_T0001219;gene_name=MED14P1;ID=exon:HG002_chrY_T0001219:1;Name=MED14P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13527383	13527678	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=HG002_chrY_T0001219;gene_id=HG002_chrY_G0000404;Parent=HG002_chrY_T0001219;transcript_name=HG002_chrY_T0001219;gene_name=MED14P1;ID=intron:HG002_chrY_T0001219:1;Name=MED14P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13527679	13527814	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=HG002_chrY_T0001219;gene_id=HG002_chrY_G0000404;Parent=HG002_chrY_T0001219;transcript_name=HG002_chrY_T0001219;gene_name=MED14P1;ID=exon:HG002_chrY_T0001219:2;Name=MED14P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13527815	13540377	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=HG002_chrY_T0001219;gene_id=HG002_chrY_G0000404;Parent=HG002_chrY_T0001219;transcript_name=HG002_chrY_T0001219;gene_name=MED14P1;ID=intron:HG002_chrY_T0001219:2;Name=MED14P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13540378	13540522	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=HG002_chrY_T0001219;gene_id=HG002_chrY_G0000404;Parent=HG002_chrY_T0001219;transcript_name=HG002_chrY_T0001219;gene_name=MED14P1;ID=exon:HG002_chrY_T0001219:3;Name=MED14P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13540523	13541932	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=HG002_chrY_T0001219;gene_id=HG002_chrY_G0000404;Parent=HG002_chrY_T0001219;transcript_name=HG002_chrY_T0001219;gene_name=MED14P1;ID=intron:HG002_chrY_T0001219:3;Name=MED14P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13541933	13542050	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=HG002_chrY_T0001219;gene_id=HG002_chrY_G0000404;Parent=HG002_chrY_T0001219;transcript_name=HG002_chrY_T0001219;gene_name=MED14P1;ID=exon:HG002_chrY_T0001219:4;Name=MED14P1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	13569421	13571651	.	-	.	source_gene_common_name=ENSG00000286009;source_gene=ENSG00000286009.3;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;gene_id=HG002_chrY_G0000405;gene_biotype=lncRNA;gene_name=ENSG00000286009;gene_sources=liftoff;ID=HG002_chrY_G0000405;Name=ENSG00000286009
HG002_chrY	CAT	transcript	13569421	13571646	1000	-	.	source_transcript=ENST00000652216.2;source_transcript_name=ENST00000652216;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652216.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000652216.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;transcript_id=HG002_chrY_T0001220;gene_id=HG002_chrY_G0000405;Parent=HG002_chrY_G0000405;transcript_name=HG002_chrY_T0001220;gene_name=ENSG00000286009;ID=HG002_chrY_T0001220;Name=ENSG00000286009
HG002_chrY	CAT	exon	13569421	13570233	.	-	.	source_transcript=ENST00000652216.2;source_transcript_name=ENST00000652216;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652216.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000652216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;transcript_id=HG002_chrY_T0001220;gene_id=HG002_chrY_G0000405;Parent=HG002_chrY_T0001220;transcript_name=HG002_chrY_T0001220;gene_name=ENSG00000286009;ID=exon:HG002_chrY_T0001220:0;Name=ENSG00000286009;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13570234	13570636	.	-	.	source_transcript=ENST00000652216.2;source_transcript_name=ENST00000652216;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652216.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000652216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;transcript_id=HG002_chrY_T0001220;gene_id=HG002_chrY_G0000405;Parent=HG002_chrY_T0001220;transcript_name=HG002_chrY_T0001220;gene_name=ENSG00000286009;ID=intron:HG002_chrY_T0001220:0;Name=ENSG00000286009;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13570637	13570862	.	-	.	source_transcript=ENST00000652216.2;source_transcript_name=ENST00000652216;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652216.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000652216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;transcript_id=HG002_chrY_T0001220;gene_id=HG002_chrY_G0000405;Parent=HG002_chrY_T0001220;transcript_name=HG002_chrY_T0001220;gene_name=ENSG00000286009;ID=exon:HG002_chrY_T0001220:1;Name=ENSG00000286009;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13570863	13571471	.	-	.	source_transcript=ENST00000652216.2;source_transcript_name=ENST00000652216;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652216.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000652216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;transcript_id=HG002_chrY_T0001220;gene_id=HG002_chrY_G0000405;Parent=HG002_chrY_T0001220;transcript_name=HG002_chrY_T0001220;gene_name=ENSG00000286009;ID=intron:HG002_chrY_T0001220:1;Name=ENSG00000286009;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13571472	13571646	.	-	.	source_transcript=ENST00000652216.2;source_transcript_name=ENST00000652216;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652216.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000652216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;transcript_id=HG002_chrY_T0001220;gene_id=HG002_chrY_G0000405;Parent=HG002_chrY_T0001220;transcript_name=HG002_chrY_T0001220;gene_name=ENSG00000286009;ID=exon:HG002_chrY_T0001220:2;Name=ENSG00000286009;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13569424	13571617	1000	-	.	source_transcript=ENST00000662422.2;source_transcript_name=ENST00000662422;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662422.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000662422.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000662422.2,ENST00000662422.2;transcript_id=HG002_chrY_T0001221;gene_id=HG002_chrY_G0000405;Parent=HG002_chrY_G0000405;transcript_name=HG002_chrY_T0001221;gene_name=ENSG00000286009;ID=HG002_chrY_T0001221;Name=ENSG00000286009
HG002_chrY	CAT	exon	13569424	13570236	.	-	.	source_transcript=ENST00000662422.2;source_transcript_name=ENST00000662422;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662422.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000662422.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000662422.2,ENST00000662422.2;transcript_id=HG002_chrY_T0001221;gene_id=HG002_chrY_G0000405;Parent=HG002_chrY_T0001221;transcript_name=HG002_chrY_T0001221;gene_name=ENSG00000286009;ID=exon:HG002_chrY_T0001221:0;Name=ENSG00000286009;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13570237	13570636	.	-	.	source_transcript=ENST00000662422.2;source_transcript_name=ENST00000662422;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662422.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000662422.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000662422.2,ENST00000662422.2;transcript_id=HG002_chrY_T0001221;gene_id=HG002_chrY_G0000405;Parent=HG002_chrY_T0001221;transcript_name=HG002_chrY_T0001221;gene_name=ENSG00000286009;ID=intron:HG002_chrY_T0001221:0;Name=ENSG00000286009;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13570637	13570862	.	-	.	source_transcript=ENST00000662422.2;source_transcript_name=ENST00000662422;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662422.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000662422.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000662422.2,ENST00000662422.2;transcript_id=HG002_chrY_T0001221;gene_id=HG002_chrY_G0000405;Parent=HG002_chrY_T0001221;transcript_name=HG002_chrY_T0001221;gene_name=ENSG00000286009;ID=exon:HG002_chrY_T0001221:1;Name=ENSG00000286009;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13570863	13571414	.	-	.	source_transcript=ENST00000662422.2;source_transcript_name=ENST00000662422;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662422.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000662422.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000662422.2,ENST00000662422.2;transcript_id=HG002_chrY_T0001221;gene_id=HG002_chrY_G0000405;Parent=HG002_chrY_T0001221;transcript_name=HG002_chrY_T0001221;gene_name=ENSG00000286009;ID=intron:HG002_chrY_T0001221:1;Name=ENSG00000286009;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13571415	13571617	.	-	.	source_transcript=ENST00000662422.2;source_transcript_name=ENST00000662422;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662422.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000662422.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000662422.2,ENST00000662422.2;transcript_id=HG002_chrY_T0001221;gene_id=HG002_chrY_G0000405;Parent=HG002_chrY_T0001221;transcript_name=HG002_chrY_T0001221;gene_name=ENSG00000286009;ID=exon:HG002_chrY_T0001221:2;Name=ENSG00000286009;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13569427	13571585	1000	-	.	source_transcript=ENST00000651143.2;source_transcript_name=ENST00000651143;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651143.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651143.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000651143.2,ENST00000651143.2;transcript_id=HG002_chrY_T0001222;gene_id=HG002_chrY_G0000405;Parent=HG002_chrY_G0000405;transcript_name=HG002_chrY_T0001222;gene_name=ENSG00000286009;ID=HG002_chrY_T0001222;Name=ENSG00000286009
HG002_chrY	CAT	exon	13569427	13570236	.	-	.	source_transcript=ENST00000651143.2;source_transcript_name=ENST00000651143;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651143.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651143.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000651143.2,ENST00000651143.2;transcript_id=HG002_chrY_T0001222;gene_id=HG002_chrY_G0000405;Parent=HG002_chrY_T0001222;transcript_name=HG002_chrY_T0001222;gene_name=ENSG00000286009;ID=exon:HG002_chrY_T0001222:0;Name=ENSG00000286009;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13570237	13570767	.	-	.	source_transcript=ENST00000651143.2;source_transcript_name=ENST00000651143;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651143.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651143.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000651143.2,ENST00000651143.2;transcript_id=HG002_chrY_T0001222;gene_id=HG002_chrY_G0000405;Parent=HG002_chrY_T0001222;transcript_name=HG002_chrY_T0001222;gene_name=ENSG00000286009;ID=intron:HG002_chrY_T0001222:0;Name=ENSG00000286009;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13570768	13570862	.	-	.	source_transcript=ENST00000651143.2;source_transcript_name=ENST00000651143;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651143.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651143.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000651143.2,ENST00000651143.2;transcript_id=HG002_chrY_T0001222;gene_id=HG002_chrY_G0000405;Parent=HG002_chrY_T0001222;transcript_name=HG002_chrY_T0001222;gene_name=ENSG00000286009;ID=exon:HG002_chrY_T0001222:1;Name=ENSG00000286009;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13570863	13571414	.	-	.	source_transcript=ENST00000651143.2;source_transcript_name=ENST00000651143;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651143.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651143.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000651143.2,ENST00000651143.2;transcript_id=HG002_chrY_T0001222;gene_id=HG002_chrY_G0000405;Parent=HG002_chrY_T0001222;transcript_name=HG002_chrY_T0001222;gene_name=ENSG00000286009;ID=intron:HG002_chrY_T0001222:1;Name=ENSG00000286009;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13571415	13571585	.	-	.	source_transcript=ENST00000651143.2;source_transcript_name=ENST00000651143;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651143.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651143.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000651143.2,ENST00000651143.2;transcript_id=HG002_chrY_T0001222;gene_id=HG002_chrY_G0000405;Parent=HG002_chrY_T0001222;transcript_name=HG002_chrY_T0001222;gene_name=ENSG00000286009;ID=exon:HG002_chrY_T0001222:2;Name=ENSG00000286009;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13569427	13571589	1000	-	.	source_transcript=ENST00000656670.1;source_transcript_name=ENST00000656670;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656670.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000656670.1,ENST00000656670.1;transcript_id=HG002_chrY_T0001223;gene_id=HG002_chrY_G0000405;Parent=HG002_chrY_G0000405;transcript_name=HG002_chrY_T0001223;gene_name=ENSG00000286009;ID=HG002_chrY_T0001223;Name=ENSG00000286009
HG002_chrY	CAT	exon	13569427	13570236	.	-	.	source_transcript=ENST00000656670.1;source_transcript_name=ENST00000656670;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000656670.1,ENST00000656670.1;transcript_id=HG002_chrY_T0001223;gene_id=HG002_chrY_G0000405;Parent=HG002_chrY_T0001223;transcript_name=HG002_chrY_T0001223;gene_name=ENSG00000286009;ID=exon:HG002_chrY_T0001223:0;Name=ENSG00000286009;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13570237	13570767	.	-	.	source_transcript=ENST00000656670.1;source_transcript_name=ENST00000656670;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000656670.1,ENST00000656670.1;transcript_id=HG002_chrY_T0001223;gene_id=HG002_chrY_G0000405;Parent=HG002_chrY_T0001223;transcript_name=HG002_chrY_T0001223;gene_name=ENSG00000286009;ID=intron:HG002_chrY_T0001223:0;Name=ENSG00000286009;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13570768	13570862	.	-	.	source_transcript=ENST00000656670.1;source_transcript_name=ENST00000656670;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000656670.1,ENST00000656670.1;transcript_id=HG002_chrY_T0001223;gene_id=HG002_chrY_G0000405;Parent=HG002_chrY_T0001223;transcript_name=HG002_chrY_T0001223;gene_name=ENSG00000286009;ID=exon:HG002_chrY_T0001223:1;Name=ENSG00000286009;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13570863	13571471	.	-	.	source_transcript=ENST00000656670.1;source_transcript_name=ENST00000656670;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000656670.1,ENST00000656670.1;transcript_id=HG002_chrY_T0001223;gene_id=HG002_chrY_G0000405;Parent=HG002_chrY_T0001223;transcript_name=HG002_chrY_T0001223;gene_name=ENSG00000286009;ID=intron:HG002_chrY_T0001223:1;Name=ENSG00000286009;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13571472	13571589	.	-	.	source_transcript=ENST00000656670.1;source_transcript_name=ENST00000656670;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000656670.1,ENST00000656670.1;transcript_id=HG002_chrY_T0001223;gene_id=HG002_chrY_G0000405;Parent=HG002_chrY_T0001223;transcript_name=HG002_chrY_T0001223;gene_name=ENSG00000286009;ID=exon:HG002_chrY_T0001223:2;Name=ENSG00000286009;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13569427	13571651	1000	-	.	source_transcript=ENST00000826919.1;source_transcript_name=ENST00000826919;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000826919.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000826919.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000826919.1,ENST00000826919.1;transcript_id=HG002_chrY_T0001224;gene_id=HG002_chrY_G0000405;Parent=HG002_chrY_G0000405;transcript_name=HG002_chrY_T0001224;gene_name=ENSG00000286009;ID=HG002_chrY_T0001224;Name=ENSG00000286009
HG002_chrY	CAT	exon	13569427	13570236	.	-	.	source_transcript=ENST00000826919.1;source_transcript_name=ENST00000826919;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000826919.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000826919.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000826919.1,ENST00000826919.1;transcript_id=HG002_chrY_T0001224;gene_id=HG002_chrY_G0000405;Parent=HG002_chrY_T0001224;transcript_name=HG002_chrY_T0001224;gene_name=ENSG00000286009;ID=exon:HG002_chrY_T0001224:0;Name=ENSG00000286009;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13570237	13570636	.	-	.	source_transcript=ENST00000826919.1;source_transcript_name=ENST00000826919;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000826919.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000826919.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000826919.1,ENST00000826919.1;transcript_id=HG002_chrY_T0001224;gene_id=HG002_chrY_G0000405;Parent=HG002_chrY_T0001224;transcript_name=HG002_chrY_T0001224;gene_name=ENSG00000286009;ID=intron:HG002_chrY_T0001224:0;Name=ENSG00000286009;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13570637	13570862	.	-	.	source_transcript=ENST00000826919.1;source_transcript_name=ENST00000826919;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000826919.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000826919.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000826919.1,ENST00000826919.1;transcript_id=HG002_chrY_T0001224;gene_id=HG002_chrY_G0000405;Parent=HG002_chrY_T0001224;transcript_name=HG002_chrY_T0001224;gene_name=ENSG00000286009;ID=exon:HG002_chrY_T0001224:1;Name=ENSG00000286009;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13570863	13571471	.	-	.	source_transcript=ENST00000826919.1;source_transcript_name=ENST00000826919;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000826919.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000826919.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000826919.1,ENST00000826919.1;transcript_id=HG002_chrY_T0001224;gene_id=HG002_chrY_G0000405;Parent=HG002_chrY_T0001224;transcript_name=HG002_chrY_T0001224;gene_name=ENSG00000286009;ID=intron:HG002_chrY_T0001224:1;Name=ENSG00000286009;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13571472	13571651	.	-	.	source_transcript=ENST00000826919.1;source_transcript_name=ENST00000826919;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000826919.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000826919.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000826919.1,ENST00000826919.1;transcript_id=HG002_chrY_T0001224;gene_id=HG002_chrY_G0000405;Parent=HG002_chrY_T0001224;transcript_name=HG002_chrY_T0001224;gene_name=ENSG00000286009;ID=exon:HG002_chrY_T0001224:2;Name=ENSG00000286009;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	13710086	13711943	.	-	.	source_gene_common_name=CDY4P;source_gene=ENSG00000228411.1;alternative_source_transcripts=ENST00000418290.1,ENST00000418290.1;gene_id=HG002_chrY_G0000406;gene_biotype=processed_pseudogene;gene_name=CDY4P;gene_sources=liftoff;ID=HG002_chrY_G0000406;Name=CDY4P
HG002_chrY	CAT	transcript	13710086	13711943	1000	-	.	source_transcript=ENST00000418290.1;source_transcript_name=CDY4P-201;source_gene=ENSG00000228411.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228411.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418290.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY4P;alternative_source_transcripts=ENST00000418290.1,ENST00000418290.1;transcript_id=HG002_chrY_T0001231;gene_id=HG002_chrY_G0000406;Parent=HG002_chrY_G0000406;transcript_name=HG002_chrY_T0001231;gene_name=CDY4P;ID=HG002_chrY_T0001231;Name=CDY4P
HG002_chrY	CAT	exon	13710086	13710829	.	-	.	source_transcript=ENST00000418290.1;source_transcript_name=CDY4P-201;source_gene=ENSG00000228411.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228411.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY4P;alternative_source_transcripts=ENST00000418290.1,ENST00000418290.1;transcript_id=HG002_chrY_T0001231;gene_id=HG002_chrY_G0000406;Parent=HG002_chrY_T0001231;transcript_name=HG002_chrY_T0001231;gene_name=CDY4P;ID=exon:HG002_chrY_T0001231:0;Name=CDY4P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13710830	13711174	.	-	.	source_transcript=ENST00000418290.1;source_transcript_name=CDY4P-201;source_gene=ENSG00000228411.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228411.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY4P;alternative_source_transcripts=ENST00000418290.1,ENST00000418290.1;transcript_id=HG002_chrY_T0001231;gene_id=HG002_chrY_G0000406;Parent=HG002_chrY_T0001231;transcript_name=HG002_chrY_T0001231;gene_name=CDY4P;ID=intron:HG002_chrY_T0001231:0;Name=CDY4P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13711175	13711943	.	-	.	source_transcript=ENST00000418290.1;source_transcript_name=CDY4P-201;source_gene=ENSG00000228411.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228411.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY4P;alternative_source_transcripts=ENST00000418290.1,ENST00000418290.1;transcript_id=HG002_chrY_T0001231;gene_id=HG002_chrY_G0000406;Parent=HG002_chrY_T0001231;transcript_name=HG002_chrY_T0001231;gene_name=CDY4P;ID=exon:HG002_chrY_T0001231:1;Name=CDY4P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	13812212	13828582	.	+	.	source_gene_common_name=DDX3Y;source_gene=ENSG00000067048.17;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;gene_id=HG002_chrY_G0000407;gene_biotype=protein_coding;gene_name=DDX3Y;gene_sources=liftoff;ID=HG002_chrY_G0000407;Name=DDX3Y
HG002_chrY	CAT	transcript	13812212	13826643	100	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_G0000407;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=HG002_chrY_T0001234;Name=DDX3Y
HG002_chrY	CAT	exon	13812212	13812518	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001234:0;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13812519	13813038	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001234:0;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13813039	13813085	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001234:1;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13813041	13813085	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001234:0;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	13813041	13813043	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=start_codon:HG002_chrY_T0001234;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13813086	13815640	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001234:1;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13815641	13815698	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001234:2;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13815641	13815698	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001234:1;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13815699	13817463	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001234:2;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13817464	13817511	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001234:3;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13817464	13817511	.	+	2	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001234:2;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13817512	13819942	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001234:3;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13819943	13820072	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001234:4;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13819943	13820072	.	+	2	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001234:3;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13820073	13820830	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001234:4;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13820831	13820986	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001234:5;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13820831	13820986	.	+	1	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001234:4;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13820987	13821066	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001234:5;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13821067	13821166	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001234:6;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13821067	13821166	.	+	1	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001234:5;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13821167	13821821	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001234:6;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13821822	13821957	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001234:7;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13821822	13821957	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001234:6;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13821958	13822667	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001234:7;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13822668	13822753	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001234:8;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13822668	13822753	.	+	2	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001234:7;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13822754	13822987	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001234:8;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13822988	13823086	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001234:9;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13822988	13823086	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001234:8;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13823087	13823170	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001234:9;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13823171	13823331	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001234:10;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13823171	13823331	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001234:9;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13823332	13823733	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001234:10;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13823734	13823878	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001234:11;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13823734	13823878	.	+	1	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001234:10;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13823879	13823986	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001234:11;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13823987	13824131	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001234:12;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13823987	13824131	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001234:11;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13824132	13824364	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001234:12;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13824365	13824546	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001234:13;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13824365	13824546	.	+	2	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001234:12;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13824547	13824620	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001234:13;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13824621	13824738	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001234:14;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13824621	13824738	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001234:13;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13824739	13825010	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001234:14;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13825011	13825164	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001234:15;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13825011	13825164	.	+	2	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001234:14;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13825165	13825506	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001234:15;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13825507	13825646	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001234:16;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13825507	13825646	.	+	1	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001234:15;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13825647	13826146	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001234:16;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13826147	13826643	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001234:17;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13826147	13826226	.	+	2	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001234:16;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	13826224	13826226	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG002_chrY_T0001234;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001234;transcript_name=HG002_chrY_T0001234;gene_name=DDX3Y;ID=stop_codon:HG002_chrY_T0001234;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13812222	13821957	100	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG002_chrY_T0001235;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_G0000407;transcript_name=HG002_chrY_T0001235;gene_name=DDX3Y;ID=HG002_chrY_T0001235;Name=DDX3Y
HG002_chrY	CAT	exon	13812222	13812518	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG002_chrY_T0001235;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001235;transcript_name=HG002_chrY_T0001235;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001235:0;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13812519	13812961	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG002_chrY_T0001235;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001235;transcript_name=HG002_chrY_T0001235;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001235:0;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13812962	13813085	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG002_chrY_T0001235;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001235;transcript_name=HG002_chrY_T0001235;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001235:1;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13813041	13813085	.	+	0	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG002_chrY_T0001235;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001235;transcript_name=HG002_chrY_T0001235;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001235:0;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	13813041	13813043	.	+	0	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG002_chrY_T0001235;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001235;transcript_name=HG002_chrY_T0001235;gene_name=DDX3Y;ID=start_codon:HG002_chrY_T0001235;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13813086	13815640	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG002_chrY_T0001235;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001235;transcript_name=HG002_chrY_T0001235;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001235:1;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13815641	13815698	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG002_chrY_T0001235;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001235;transcript_name=HG002_chrY_T0001235;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001235:2;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13815641	13815698	.	+	0	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG002_chrY_T0001235;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001235;transcript_name=HG002_chrY_T0001235;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001235:1;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13815699	13817463	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG002_chrY_T0001235;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001235;transcript_name=HG002_chrY_T0001235;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001235:2;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13817464	13817511	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG002_chrY_T0001235;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001235;transcript_name=HG002_chrY_T0001235;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001235:3;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13817464	13817511	.	+	2	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG002_chrY_T0001235;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001235;transcript_name=HG002_chrY_T0001235;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001235:2;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13817512	13819942	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG002_chrY_T0001235;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001235;transcript_name=HG002_chrY_T0001235;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001235:3;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13819943	13820072	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG002_chrY_T0001235;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001235;transcript_name=HG002_chrY_T0001235;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001235:4;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13819943	13820072	.	+	2	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG002_chrY_T0001235;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001235;transcript_name=HG002_chrY_T0001235;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001235:3;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13820073	13820830	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG002_chrY_T0001235;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001235;transcript_name=HG002_chrY_T0001235;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001235:4;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13820831	13820986	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG002_chrY_T0001235;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001235;transcript_name=HG002_chrY_T0001235;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001235:5;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13820831	13820986	.	+	1	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG002_chrY_T0001235;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001235;transcript_name=HG002_chrY_T0001235;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001235:4;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13820987	13821066	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG002_chrY_T0001235;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001235;transcript_name=HG002_chrY_T0001235;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001235:5;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13821067	13821166	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG002_chrY_T0001235;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001235;transcript_name=HG002_chrY_T0001235;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001235:6;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13821067	13821166	.	+	1	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG002_chrY_T0001235;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001235;transcript_name=HG002_chrY_T0001235;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001235:5;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13821167	13821821	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG002_chrY_T0001235;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001235;transcript_name=HG002_chrY_T0001235;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001235:6;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13821822	13821957	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG002_chrY_T0001235;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001235;transcript_name=HG002_chrY_T0001235;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001235:7;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13821822	13821957	.	+	0	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG002_chrY_T0001235;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001235;transcript_name=HG002_chrY_T0001235;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001235:6;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13812953	13817800	1000	+	.	source_transcript=ENST00000493363.1;source_transcript_name=DDX3Y-208;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493363.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493363.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000493363.1,ENST00000493363.1;transcript_id=HG002_chrY_T0001236;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_G0000407;transcript_name=HG002_chrY_T0001236;gene_name=DDX3Y;ID=HG002_chrY_T0001236;Name=DDX3Y
HG002_chrY	CAT	exon	13812953	13813085	.	+	.	source_transcript=ENST00000493363.1;source_transcript_name=DDX3Y-208;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493363.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493363.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000493363.1,ENST00000493363.1;transcript_id=HG002_chrY_T0001236;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001236;transcript_name=HG002_chrY_T0001236;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001236:0;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13813086	13815640	.	+	.	source_transcript=ENST00000493363.1;source_transcript_name=DDX3Y-208;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493363.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493363.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000493363.1,ENST00000493363.1;transcript_id=HG002_chrY_T0001236;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001236;transcript_name=HG002_chrY_T0001236;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001236:0;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13815641	13815698	.	+	.	source_transcript=ENST00000493363.1;source_transcript_name=DDX3Y-208;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493363.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493363.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000493363.1,ENST00000493363.1;transcript_id=HG002_chrY_T0001236;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001236;transcript_name=HG002_chrY_T0001236;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001236:1;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13815699	13817463	.	+	.	source_transcript=ENST00000493363.1;source_transcript_name=DDX3Y-208;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493363.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493363.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000493363.1,ENST00000493363.1;transcript_id=HG002_chrY_T0001236;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001236;transcript_name=HG002_chrY_T0001236;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001236:1;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13817464	13817800	.	+	.	source_transcript=ENST00000493363.1;source_transcript_name=DDX3Y-208;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493363.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493363.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000493363.1,ENST00000493363.1;transcript_id=HG002_chrY_T0001236;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001236;transcript_name=HG002_chrY_T0001236;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001236:2;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13812972	13828582	100	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_G0000407;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=HG002_chrY_T0001237;Name=DDX3Y
HG002_chrY	CAT	exon	13812972	13813085	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001237:0;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13813041	13813085	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001237:0;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	13813041	13813043	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=start_codon:HG002_chrY_T0001237;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13813086	13815640	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001237:0;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13815641	13815698	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001237:1;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13815641	13815698	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001237:1;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13815699	13817463	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001237:1;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13817464	13817511	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001237:2;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13817464	13817511	.	+	2	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001237:2;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13817512	13819942	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001237:2;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13819943	13820072	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001237:3;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13819943	13820072	.	+	2	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001237:3;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13820073	13820830	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001237:3;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13820831	13820986	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001237:4;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13820831	13820986	.	+	1	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001237:4;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13820987	13821066	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001237:4;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13821067	13821166	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001237:5;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13821067	13821166	.	+	1	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001237:5;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13821167	13821821	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001237:5;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13821822	13821957	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001237:6;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13821822	13821957	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001237:6;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13821958	13822667	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001237:6;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13822668	13822753	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001237:7;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13822668	13822753	.	+	2	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001237:7;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13822754	13822987	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001237:7;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13822988	13823086	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001237:8;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13822988	13823086	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001237:8;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13823087	13823170	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001237:8;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13823171	13823331	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001237:9;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13823171	13823331	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001237:9;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13823332	13823733	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001237:9;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13823734	13823878	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001237:10;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13823734	13823878	.	+	1	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001237:10;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13823879	13823986	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001237:10;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13823987	13824131	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001237:11;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13823987	13824131	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001237:11;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13824132	13824364	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001237:11;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13824365	13824546	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001237:12;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13824365	13824546	.	+	2	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001237:12;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13824547	13824620	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001237:12;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13824621	13824738	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001237:13;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13824621	13824738	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001237:13;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13824739	13825010	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001237:13;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13825011	13825164	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001237:14;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13825011	13825164	.	+	2	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001237:14;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13825165	13825506	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001237:14;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13825507	13825646	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001237:15;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13825507	13825646	.	+	1	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001237:15;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13825647	13826146	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001237:15;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13826147	13828582	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001237:16;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13826147	13826226	.	+	2	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001237:16;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	13826224	13826226	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG002_chrY_T0001237;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001237;transcript_name=HG002_chrY_T0001237;gene_name=DDX3Y;ID=stop_codon:HG002_chrY_T0001237;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13813842	13822753	100	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG002_chrY_T0001238;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_G0000407;transcript_name=HG002_chrY_T0001238;gene_name=DDX3Y;ID=HG002_chrY_T0001238;Name=DDX3Y
HG002_chrY	CAT	exon	13813842	13813919	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG002_chrY_T0001238;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001238;transcript_name=HG002_chrY_T0001238;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001238:0;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13813884	13813919	.	+	0	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG002_chrY_T0001238;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001238;transcript_name=HG002_chrY_T0001238;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001238:0;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	13813884	13813886	.	+	0	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG002_chrY_T0001238;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001238;transcript_name=HG002_chrY_T0001238;gene_name=DDX3Y;ID=start_codon:HG002_chrY_T0001238;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13813920	13815640	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG002_chrY_T0001238;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001238;transcript_name=HG002_chrY_T0001238;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001238:0;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13815641	13815698	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG002_chrY_T0001238;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001238;transcript_name=HG002_chrY_T0001238;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001238:1;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13815641	13815698	.	+	0	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG002_chrY_T0001238;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001238;transcript_name=HG002_chrY_T0001238;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001238:1;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13815699	13817463	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG002_chrY_T0001238;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001238;transcript_name=HG002_chrY_T0001238;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001238:1;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13817464	13817511	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG002_chrY_T0001238;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001238;transcript_name=HG002_chrY_T0001238;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001238:2;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13817464	13817511	.	+	2	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG002_chrY_T0001238;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001238;transcript_name=HG002_chrY_T0001238;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001238:2;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13817512	13819942	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG002_chrY_T0001238;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001238;transcript_name=HG002_chrY_T0001238;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001238:2;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13819943	13820072	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG002_chrY_T0001238;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001238;transcript_name=HG002_chrY_T0001238;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001238:3;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13819943	13820072	.	+	2	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG002_chrY_T0001238;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001238;transcript_name=HG002_chrY_T0001238;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001238:3;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13820073	13820830	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG002_chrY_T0001238;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001238;transcript_name=HG002_chrY_T0001238;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001238:3;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13820831	13820986	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG002_chrY_T0001238;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001238;transcript_name=HG002_chrY_T0001238;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001238:4;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13820831	13820986	.	+	1	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG002_chrY_T0001238;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001238;transcript_name=HG002_chrY_T0001238;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001238:4;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13820987	13821066	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG002_chrY_T0001238;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001238;transcript_name=HG002_chrY_T0001238;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001238:4;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13821067	13821166	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG002_chrY_T0001238;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001238;transcript_name=HG002_chrY_T0001238;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001238:5;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13821067	13821166	.	+	1	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG002_chrY_T0001238;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001238;transcript_name=HG002_chrY_T0001238;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001238:5;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13821167	13821821	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG002_chrY_T0001238;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001238;transcript_name=HG002_chrY_T0001238;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001238:5;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13821822	13821957	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG002_chrY_T0001238;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001238;transcript_name=HG002_chrY_T0001238;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001238:6;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13821822	13821957	.	+	0	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG002_chrY_T0001238;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001238;transcript_name=HG002_chrY_T0001238;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001238:6;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13821958	13822667	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG002_chrY_T0001238;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001238;transcript_name=HG002_chrY_T0001238;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001238:6;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13822668	13822753	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG002_chrY_T0001238;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001238;transcript_name=HG002_chrY_T0001238;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001238:7;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	13822668	13822753	.	+	2	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG002_chrY_T0001238;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001238;transcript_name=HG002_chrY_T0001238;gene_name=DDX3Y;ID=CDS:HG002_chrY_T0001238:7;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13820744	13821905	1000	+	.	source_transcript=ENST00000469101.1;source_transcript_name=DDX3Y-206;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469101.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469101.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000469101.1,ENST00000469101.1;transcript_id=HG002_chrY_T0001239;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_G0000407;transcript_name=HG002_chrY_T0001239;gene_name=DDX3Y;ID=HG002_chrY_T0001239;Name=DDX3Y
HG002_chrY	CAT	exon	13820744	13821166	.	+	.	source_transcript=ENST00000469101.1;source_transcript_name=DDX3Y-206;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469101.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469101.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000469101.1,ENST00000469101.1;transcript_id=HG002_chrY_T0001239;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001239;transcript_name=HG002_chrY_T0001239;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001239:0;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13821167	13821821	.	+	.	source_transcript=ENST00000469101.1;source_transcript_name=DDX3Y-206;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469101.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469101.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000469101.1,ENST00000469101.1;transcript_id=HG002_chrY_T0001239;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001239;transcript_name=HG002_chrY_T0001239;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001239:0;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13821822	13821905	.	+	.	source_transcript=ENST00000469101.1;source_transcript_name=DDX3Y-206;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469101.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469101.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000469101.1,ENST00000469101.1;transcript_id=HG002_chrY_T0001239;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001239;transcript_name=HG002_chrY_T0001239;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001239:1;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13821067	13823003	1000	+	.	source_transcript=ENST00000472510.5;source_transcript_name=DDX3Y-207;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000472510.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472510.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000472510.5,ENST00000472510.5;transcript_id=HG002_chrY_T0001240;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_G0000407;transcript_name=HG002_chrY_T0001240;gene_name=DDX3Y;ID=HG002_chrY_T0001240;Name=DDX3Y
HG002_chrY	CAT	exon	13821067	13821166	.	+	.	source_transcript=ENST00000472510.5;source_transcript_name=DDX3Y-207;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000472510.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472510.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000472510.5,ENST00000472510.5;transcript_id=HG002_chrY_T0001240;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001240;transcript_name=HG002_chrY_T0001240;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001240:0;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13821167	13821821	.	+	.	source_transcript=ENST00000472510.5;source_transcript_name=DDX3Y-207;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000472510.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472510.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000472510.5,ENST00000472510.5;transcript_id=HG002_chrY_T0001240;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001240;transcript_name=HG002_chrY_T0001240;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001240:0;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13821822	13821957	.	+	.	source_transcript=ENST00000472510.5;source_transcript_name=DDX3Y-207;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000472510.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472510.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000472510.5,ENST00000472510.5;transcript_id=HG002_chrY_T0001240;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001240;transcript_name=HG002_chrY_T0001240;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001240:1;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13821958	13822667	.	+	.	source_transcript=ENST00000472510.5;source_transcript_name=DDX3Y-207;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000472510.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472510.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000472510.5,ENST00000472510.5;transcript_id=HG002_chrY_T0001240;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001240;transcript_name=HG002_chrY_T0001240;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001240:1;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13822668	13823003	.	+	.	source_transcript=ENST00000472510.5;source_transcript_name=DDX3Y-207;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000472510.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472510.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000472510.5,ENST00000472510.5;transcript_id=HG002_chrY_T0001240;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001240;transcript_name=HG002_chrY_T0001240;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001240:2;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13821112	13823331	1000	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=HG002_chrY_T0001241;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_G0000407;transcript_name=HG002_chrY_T0001241;gene_name=DDX3Y;ID=HG002_chrY_T0001241;Name=DDX3Y
HG002_chrY	CAT	exon	13821112	13821166	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=HG002_chrY_T0001241;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001241;transcript_name=HG002_chrY_T0001241;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001241:0;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13821167	13821821	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=HG002_chrY_T0001241;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001241;transcript_name=HG002_chrY_T0001241;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001241:0;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13821822	13821957	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=HG002_chrY_T0001241;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001241;transcript_name=HG002_chrY_T0001241;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001241:1;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13821958	13822667	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=HG002_chrY_T0001241;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001241;transcript_name=HG002_chrY_T0001241;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001241:1;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13822668	13822753	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=HG002_chrY_T0001241;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001241;transcript_name=HG002_chrY_T0001241;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001241:2;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13822754	13822987	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=HG002_chrY_T0001241;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001241;transcript_name=HG002_chrY_T0001241;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001241:2;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13822988	13823331	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=HG002_chrY_T0001241;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001241;transcript_name=HG002_chrY_T0001241;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001241:3;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	13823600	13824457	1000	+	.	source_transcript=ENST00000495478.1;source_transcript_name=DDX3Y-209;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495478.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000495478.1,ENST00000495478.1;transcript_id=HG002_chrY_T0001242;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_G0000407;transcript_name=HG002_chrY_T0001242;gene_name=DDX3Y;ID=HG002_chrY_T0001242;Name=DDX3Y
HG002_chrY	CAT	exon	13823600	13823878	.	+	.	source_transcript=ENST00000495478.1;source_transcript_name=DDX3Y-209;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000495478.1,ENST00000495478.1;transcript_id=HG002_chrY_T0001242;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001242;transcript_name=HG002_chrY_T0001242;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001242:0;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13823879	13823986	.	+	.	source_transcript=ENST00000495478.1;source_transcript_name=DDX3Y-209;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000495478.1,ENST00000495478.1;transcript_id=HG002_chrY_T0001242;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001242;transcript_name=HG002_chrY_T0001242;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001242:0;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13823987	13824131	.	+	.	source_transcript=ENST00000495478.1;source_transcript_name=DDX3Y-209;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000495478.1,ENST00000495478.1;transcript_id=HG002_chrY_T0001242;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001242;transcript_name=HG002_chrY_T0001242;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001242:1;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13824132	13824364	.	+	.	source_transcript=ENST00000495478.1;source_transcript_name=DDX3Y-209;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000495478.1,ENST00000495478.1;transcript_id=HG002_chrY_T0001242;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001242;transcript_name=HG002_chrY_T0001242;gene_name=DDX3Y;ID=intron:HG002_chrY_T0001242:1;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13824365	13824457	.	+	.	source_transcript=ENST00000495478.1;source_transcript_name=DDX3Y-209;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000495478.1,ENST00000495478.1;transcript_id=HG002_chrY_T0001242;gene_id=HG002_chrY_G0000407;Parent=HG002_chrY_T0001242;transcript_name=HG002_chrY_T0001242;gene_name=DDX3Y;ID=exon:HG002_chrY_T0001242:2;Name=DDX3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	13838269	13856285	.	-	.	source_gene_common_name=CASKP1;source_gene=ENSG00000234059.1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;gene_id=HG002_chrY_G0000408;gene_biotype=unprocessed_pseudogene;gene_name=CASKP1;gene_sources=liftoff;ID=HG002_chrY_G0000408;Name=CASKP1
HG002_chrY	CAT	transcript	13838269	13856285	1000	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG002_chrY_T0001243;gene_id=HG002_chrY_G0000408;Parent=HG002_chrY_G0000408;transcript_name=HG002_chrY_T0001243;gene_name=CASKP1;ID=HG002_chrY_T0001243;Name=CASKP1
HG002_chrY	CAT	exon	13838269	13838431	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG002_chrY_T0001243;gene_id=HG002_chrY_G0000408;Parent=HG002_chrY_T0001243;transcript_name=HG002_chrY_T0001243;gene_name=CASKP1;ID=exon:HG002_chrY_T0001243:0;Name=CASKP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13838432	13843305	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG002_chrY_T0001243;gene_id=HG002_chrY_G0000408;Parent=HG002_chrY_T0001243;transcript_name=HG002_chrY_T0001243;gene_name=CASKP1;ID=intron:HG002_chrY_T0001243:0;Name=CASKP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13843306	13843390	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG002_chrY_T0001243;gene_id=HG002_chrY_G0000408;Parent=HG002_chrY_T0001243;transcript_name=HG002_chrY_T0001243;gene_name=CASKP1;ID=exon:HG002_chrY_T0001243:1;Name=CASKP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13843391	13853722	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG002_chrY_T0001243;gene_id=HG002_chrY_G0000408;Parent=HG002_chrY_T0001243;transcript_name=HG002_chrY_T0001243;gene_name=CASKP1;ID=intron:HG002_chrY_T0001243:1;Name=CASKP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13853723	13853766	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG002_chrY_T0001243;gene_id=HG002_chrY_G0000408;Parent=HG002_chrY_T0001243;transcript_name=HG002_chrY_T0001243;gene_name=CASKP1;ID=exon:HG002_chrY_T0001243:2;Name=CASKP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13853767	13853991	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG002_chrY_T0001243;gene_id=HG002_chrY_G0000408;Parent=HG002_chrY_T0001243;transcript_name=HG002_chrY_T0001243;gene_name=CASKP1;ID=intron:HG002_chrY_T0001243:2;Name=CASKP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13853992	13854026	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG002_chrY_T0001243;gene_id=HG002_chrY_G0000408;Parent=HG002_chrY_T0001243;transcript_name=HG002_chrY_T0001243;gene_name=CASKP1;ID=exon:HG002_chrY_T0001243:3;Name=CASKP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13854027	13854127	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG002_chrY_T0001243;gene_id=HG002_chrY_G0000408;Parent=HG002_chrY_T0001243;transcript_name=HG002_chrY_T0001243;gene_name=CASKP1;ID=intron:HG002_chrY_T0001243:3;Name=CASKP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13854128	13854175	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG002_chrY_T0001243;gene_id=HG002_chrY_G0000408;Parent=HG002_chrY_T0001243;transcript_name=HG002_chrY_T0001243;gene_name=CASKP1;ID=exon:HG002_chrY_T0001243:4;Name=CASKP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13854176	13854390	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG002_chrY_T0001243;gene_id=HG002_chrY_G0000408;Parent=HG002_chrY_T0001243;transcript_name=HG002_chrY_T0001243;gene_name=CASKP1;ID=intron:HG002_chrY_T0001243:4;Name=CASKP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13854391	13854410	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG002_chrY_T0001243;gene_id=HG002_chrY_G0000408;Parent=HG002_chrY_T0001243;transcript_name=HG002_chrY_T0001243;gene_name=CASKP1;ID=exon:HG002_chrY_T0001243:5;Name=CASKP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13854411	13855777	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG002_chrY_T0001243;gene_id=HG002_chrY_G0000408;Parent=HG002_chrY_T0001243;transcript_name=HG002_chrY_T0001243;gene_name=CASKP1;ID=intron:HG002_chrY_T0001243:5;Name=CASKP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13855778	13855881	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG002_chrY_T0001243;gene_id=HG002_chrY_G0000408;Parent=HG002_chrY_T0001243;transcript_name=HG002_chrY_T0001243;gene_name=CASKP1;ID=exon:HG002_chrY_T0001243:6;Name=CASKP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13855882	13856202	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG002_chrY_T0001243;gene_id=HG002_chrY_G0000408;Parent=HG002_chrY_T0001243;transcript_name=HG002_chrY_T0001243;gene_name=CASKP1;ID=intron:HG002_chrY_T0001243:6;Name=CASKP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	13856203	13856285	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG002_chrY_T0001243;gene_id=HG002_chrY_G0000408;Parent=HG002_chrY_T0001243;transcript_name=HG002_chrY_T0001243;gene_name=CASKP1;ID=exon:HG002_chrY_T0001243:7;Name=CASKP1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	13991895	14003910	.	+	.	source_gene_common_name=SFPQP1;source_gene=ENSG00000224035.1;alternative_source_transcripts=ENST00000446621.1,ENST00000446621.1;gene_id=HG002_chrY_G0000409;gene_biotype=processed_pseudogene;gene_name=SFPQP1;gene_sources=liftoff;ID=HG002_chrY_G0000409;Name=SFPQP1
HG002_chrY	CAT	transcript	13991895	14003910	1000	+	.	source_transcript=ENST00000446621.1;source_transcript_name=SFPQP1-201;source_gene=ENSG00000224035.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224035.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000446621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446621.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SFPQP1;alternative_source_transcripts=ENST00000446621.1,ENST00000446621.1;transcript_id=HG002_chrY_T0001244;gene_id=HG002_chrY_G0000409;Parent=HG002_chrY_G0000409;transcript_name=HG002_chrY_T0001244;gene_name=SFPQP1;ID=HG002_chrY_T0001244;Name=SFPQP1
HG002_chrY	CAT	exon	13991895	13992449	.	+	.	source_transcript=ENST00000446621.1;source_transcript_name=SFPQP1-201;source_gene=ENSG00000224035.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224035.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000446621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SFPQP1;alternative_source_transcripts=ENST00000446621.1,ENST00000446621.1;transcript_id=HG002_chrY_T0001244;gene_id=HG002_chrY_G0000409;Parent=HG002_chrY_T0001244;transcript_name=HG002_chrY_T0001244;gene_name=SFPQP1;ID=exon:HG002_chrY_T0001244:0;Name=SFPQP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	13992450	14002679	.	+	.	source_transcript=ENST00000446621.1;source_transcript_name=SFPQP1-201;source_gene=ENSG00000224035.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224035.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000446621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SFPQP1;alternative_source_transcripts=ENST00000446621.1,ENST00000446621.1;transcript_id=HG002_chrY_T0001244;gene_id=HG002_chrY_G0000409;Parent=HG002_chrY_T0001244;transcript_name=HG002_chrY_T0001244;gene_name=SFPQP1;ID=intron:HG002_chrY_T0001244:0;Name=SFPQP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14002680	14003910	.	+	.	source_transcript=ENST00000446621.1;source_transcript_name=SFPQP1-201;source_gene=ENSG00000224035.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224035.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000446621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SFPQP1;alternative_source_transcripts=ENST00000446621.1,ENST00000446621.1;transcript_id=HG002_chrY_T0001244;gene_id=HG002_chrY_G0000409;Parent=HG002_chrY_T0001244;transcript_name=HG002_chrY_T0001244;gene_name=SFPQP1;ID=exon:HG002_chrY_T0001244:1;Name=SFPQP1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	14060467	14068750	.	-	.	source_gene_common_name=TAB3P1;source_gene=ENSG00000235462.2;gene_id=HG002_chrY_G0000410;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TAB3P1;gene_sources=liftoff;ID=HG002_chrY_G0000410;Name=TAB3P1
HG002_chrY	CAT	transcript	14060467	14068750	1000	-	.	source_transcript=ENST00000452645.1;source_transcript_name=TAB3P1-201;source_gene=ENSG00000235462.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235462.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000452645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452645.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAB3P1;transcript_id=HG002_chrY_T0001245;gene_id=HG002_chrY_G0000410;Parent=HG002_chrY_G0000410;transcript_name=HG002_chrY_T0001245;gene_name=TAB3P1;ID=HG002_chrY_T0001245;Name=TAB3P1
HG002_chrY	CAT	exon	14060467	14060560	.	-	.	source_transcript=ENST00000452645.1;source_transcript_name=TAB3P1-201;source_gene=ENSG00000235462.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235462.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000452645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAB3P1;transcript_id=HG002_chrY_T0001245;gene_id=HG002_chrY_G0000410;Parent=HG002_chrY_T0001245;transcript_name=HG002_chrY_T0001245;gene_name=TAB3P1;ID=exon:HG002_chrY_T0001245:0;Name=TAB3P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14060561	14066491	.	-	.	source_transcript=ENST00000452645.1;source_transcript_name=TAB3P1-201;source_gene=ENSG00000235462.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235462.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000452645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAB3P1;transcript_id=HG002_chrY_T0001245;gene_id=HG002_chrY_G0000410;Parent=HG002_chrY_T0001245;transcript_name=HG002_chrY_T0001245;gene_name=TAB3P1;ID=intron:HG002_chrY_T0001245:0;Name=TAB3P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14066492	14066652	.	-	.	source_transcript=ENST00000452645.1;source_transcript_name=TAB3P1-201;source_gene=ENSG00000235462.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235462.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000452645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAB3P1;transcript_id=HG002_chrY_T0001245;gene_id=HG002_chrY_G0000410;Parent=HG002_chrY_T0001245;transcript_name=HG002_chrY_T0001245;gene_name=TAB3P1;ID=exon:HG002_chrY_T0001245:1;Name=TAB3P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14066653	14067371	.	-	.	source_transcript=ENST00000452645.1;source_transcript_name=TAB3P1-201;source_gene=ENSG00000235462.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235462.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000452645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAB3P1;transcript_id=HG002_chrY_T0001245;gene_id=HG002_chrY_G0000410;Parent=HG002_chrY_T0001245;transcript_name=HG002_chrY_T0001245;gene_name=TAB3P1;ID=intron:HG002_chrY_T0001245:1;Name=TAB3P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14067372	14068750	.	-	.	source_transcript=ENST00000452645.1;source_transcript_name=TAB3P1-201;source_gene=ENSG00000235462.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235462.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000452645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAB3P1;transcript_id=HG002_chrY_T0001245;gene_id=HG002_chrY_G0000410;Parent=HG002_chrY_T0001245;transcript_name=HG002_chrY_T0001245;gene_name=TAB3P1;ID=exon:HG002_chrY_T0001245:2;Name=TAB3P1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	14065809	14068085	.	-	.	source_gene_common_name=ENSG00000290852;source_gene=ENSG00000290852.1;gene_id=HG002_chrY_G0000411;gene_biotype=lncRNA;gene_name=ENSG00000290852;gene_sources=liftoff;ID=HG002_chrY_G0000411;Name=ENSG00000290852
HG002_chrY	CAT	transcript	14065809	14068085	1000	-	.	source_transcript=ENST00000439217.1;source_transcript_name=ENST00000439217;source_gene=ENSG00000290852.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290852.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439217.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290852;transcript_id=HG002_chrY_T0001246;gene_id=HG002_chrY_G0000411;Parent=HG002_chrY_G0000411;transcript_name=HG002_chrY_T0001246;gene_name=ENSG00000290852;ID=HG002_chrY_T0001246;Name=ENSG00000290852
HG002_chrY	CAT	exon	14065809	14066005	.	-	.	source_transcript=ENST00000439217.1;source_transcript_name=ENST00000439217;source_gene=ENSG00000290852.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290852.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290852;transcript_id=HG002_chrY_T0001246;gene_id=HG002_chrY_G0000411;Parent=HG002_chrY_T0001246;transcript_name=HG002_chrY_T0001246;gene_name=ENSG00000290852;ID=exon:HG002_chrY_T0001246:0;Name=ENSG00000290852;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14066006	14067429	.	-	.	source_transcript=ENST00000439217.1;source_transcript_name=ENST00000439217;source_gene=ENSG00000290852.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290852.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290852;transcript_id=HG002_chrY_T0001246;gene_id=HG002_chrY_G0000411;Parent=HG002_chrY_T0001246;transcript_name=HG002_chrY_T0001246;gene_name=ENSG00000290852;ID=intron:HG002_chrY_T0001246:0;Name=ENSG00000290852;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14067430	14068085	.	-	.	source_transcript=ENST00000439217.1;source_transcript_name=ENST00000439217;source_gene=ENSG00000290852.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290852.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290852;transcript_id=HG002_chrY_T0001246;gene_id=HG002_chrY_G0000411;Parent=HG002_chrY_T0001246;transcript_name=HG002_chrY_T0001246;gene_name=ENSG00000290852;ID=exon:HG002_chrY_T0001246:1;Name=ENSG00000290852;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	14137421	14137976	.	+	.	source_gene_common_name=DPPA2P1;source_gene=ENSG00000223915.1;alternative_source_transcripts=ENST00000428060.1,ENST00000428060.1;gene_id=HG002_chrY_G0000412;gene_biotype=processed_pseudogene;gene_name=DPPA2P1;gene_sources=liftoff;ID=HG002_chrY_G0000412;Name=DPPA2P1
HG002_chrY	CAT	transcript	14137421	14137976	1000	+	.	source_transcript=ENST00000428060.1;source_transcript_name=DPPA2P1-201;source_gene=ENSG00000223915.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223915.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428060.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DPPA2P1;alternative_source_transcripts=ENST00000428060.1,ENST00000428060.1;transcript_id=HG002_chrY_T0001247;gene_id=HG002_chrY_G0000412;Parent=HG002_chrY_G0000412;transcript_name=HG002_chrY_T0001247;gene_name=DPPA2P1;ID=HG002_chrY_T0001247;Name=DPPA2P1
HG002_chrY	CAT	exon	14137421	14137976	.	+	.	source_transcript=ENST00000428060.1;source_transcript_name=DPPA2P1-201;source_gene=ENSG00000223915.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223915.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428060.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DPPA2P1;alternative_source_transcripts=ENST00000428060.1,ENST00000428060.1;transcript_id=HG002_chrY_T0001247;gene_id=HG002_chrY_G0000412;Parent=HG002_chrY_T0001247;transcript_name=HG002_chrY_T0001247;gene_name=DPPA2P1;ID=exon:HG002_chrY_T0001247:0;Name=DPPA2P1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	14141114	14387192	.	-	.	source_gene_common_name=UTY;source_gene=ENSG00000183878.16;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;gene_id=HG002_chrY_G0000413;gene_biotype=protein_coding;gene_name=UTY;gene_sources=liftoff,transMap;ID=HG002_chrY_G0000413;Name=UTY
HG002_chrY	CAT	transcript	14141114	14386488	1000	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_G0000413;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=HG002_chrY_T0001248;Name=UTY
HG002_chrY	CAT	exon	14141114	14141363	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=exon:HG002_chrY_T0001248:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14141114	14141363	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=CDS:HG002_chrY_T0001248:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14141364	14157552	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=intron:HG002_chrY_T0001248:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14157553	14157723	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=exon:HG002_chrY_T0001248:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14157553	14157723	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=CDS:HG002_chrY_T0001248:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14157724	14166813	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=intron:HG002_chrY_T0001248:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14166814	14166940	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=exon:HG002_chrY_T0001248:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14166814	14166940	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=CDS:HG002_chrY_T0001248:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14166941	14204242	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=intron:HG002_chrY_T0001248:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14204243	14204384	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=exon:HG002_chrY_T0001248:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14204243	14204384	.	-	2	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=CDS:HG002_chrY_T0001248:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14204385	14205492	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=intron:HG002_chrY_T0001248:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14205493	14205680	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=exon:HG002_chrY_T0001248:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14205493	14205680	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=CDS:HG002_chrY_T0001248:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14205681	14209411	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=intron:HG002_chrY_T0001248:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14209412	14209526	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=exon:HG002_chrY_T0001248:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14209412	14209526	.	-	2	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=CDS:HG002_chrY_T0001248:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14209527	14211933	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=intron:HG002_chrY_T0001248:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14211934	14212082	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=exon:HG002_chrY_T0001248:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14211934	14212082	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=CDS:HG002_chrY_T0001248:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212083	14212572	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=intron:HG002_chrY_T0001248:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14212573	14212647	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=exon:HG002_chrY_T0001248:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14212573	14212647	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=CDS:HG002_chrY_T0001248:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212648	14212720	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=intron:HG002_chrY_T0001248:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14212721	14212785	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=exon:HG002_chrY_T0001248:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14212721	14212785	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=CDS:HG002_chrY_T0001248:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212786	14230088	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=intron:HG002_chrY_T0001248:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14230089	14230294	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=exon:HG002_chrY_T0001248:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14230089	14230294	.	-	2	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=CDS:HG002_chrY_T0001248:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14230295	14231134	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=intron:HG002_chrY_T0001248:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14231135	14231240	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=exon:HG002_chrY_T0001248:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14231135	14231240	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=CDS:HG002_chrY_T0001248:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14231241	14232754	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=intron:HG002_chrY_T0001248:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14232755	14232884	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=exon:HG002_chrY_T0001248:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14232755	14232884	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=CDS:HG002_chrY_T0001248:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14232885	14242096	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=intron:HG002_chrY_T0001248:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14242097	14242869	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=exon:HG002_chrY_T0001248:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14242097	14242869	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=CDS:HG002_chrY_T0001248:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14242870	14261536	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=intron:HG002_chrY_T0001248:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14261537	14261932	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=exon:HG002_chrY_T0001248:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14261537	14261932	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=CDS:HG002_chrY_T0001248:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14261933	14262456	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=intron:HG002_chrY_T0001248:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14262457	14262552	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=exon:HG002_chrY_T0001248:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14262457	14262552	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=CDS:HG002_chrY_T0001248:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14262553	14264410	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=intron:HG002_chrY_T0001248:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14264411	14264503	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=exon:HG002_chrY_T0001248:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14264411	14264503	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=CDS:HG002_chrY_T0001248:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14264504	14266300	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=intron:HG002_chrY_T0001248:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14266301	14266520	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=exon:HG002_chrY_T0001248:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14266301	14266520	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=CDS:HG002_chrY_T0001248:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14266521	14266963	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=intron:HG002_chrY_T0001248:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14266964	14267062	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=exon:HG002_chrY_T0001248:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14266964	14267062	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=CDS:HG002_chrY_T0001248:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14267063	14272800	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=intron:HG002_chrY_T0001248:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14272801	14272927	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=exon:HG002_chrY_T0001248:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14272801	14272927	.	-	2	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=CDS:HG002_chrY_T0001248:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14272928	14275789	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=intron:HG002_chrY_T0001248:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14275790	14275883	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=exon:HG002_chrY_T0001248:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14275790	14275883	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=CDS:HG002_chrY_T0001248:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14275884	14300394	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=intron:HG002_chrY_T0001248:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14300395	14300429	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=exon:HG002_chrY_T0001248:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14300395	14300429	.	-	2	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=CDS:HG002_chrY_T0001248:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14300430	14303453	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=intron:HG002_chrY_T0001248:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14303454	14303508	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=exon:HG002_chrY_T0001248:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14303454	14303508	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=CDS:HG002_chrY_T0001248:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14303509	14317527	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=intron:HG002_chrY_T0001248:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14317528	14317648	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=exon:HG002_chrY_T0001248:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14317528	14317648	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=CDS:HG002_chrY_T0001248:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14317649	14321269	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=intron:HG002_chrY_T0001248:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14321270	14321328	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=exon:HG002_chrY_T0001248:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14321270	14321328	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=CDS:HG002_chrY_T0001248:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14321329	14355535	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=intron:HG002_chrY_T0001248:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14355536	14355585	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=exon:HG002_chrY_T0001248:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14355536	14355585	.	-	2	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=CDS:HG002_chrY_T0001248:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14355586	14376639	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=intron:HG002_chrY_T0001248:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14376640	14376748	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=exon:HG002_chrY_T0001248:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14376640	14376748	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=CDS:HG002_chrY_T0001248:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14376749	14385772	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=intron:HG002_chrY_T0001248:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14385773	14385836	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=exon:HG002_chrY_T0001248:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14385773	14385836	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=CDS:HG002_chrY_T0001248:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14385837	14386032	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=intron:HG002_chrY_T0001248:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14386033	14386488	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=exon:HG002_chrY_T0001248:27;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14386033	14386184	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=CDS:HG002_chrY_T0001248:27;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	14386182	14386184	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG002_chrY_T0001248;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001248;transcript_name=HG002_chrY_T0001248;gene_name=UTY;ID=start_codon:HG002_chrY_T0001248;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	14141117	14266321	1000	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_G0000413;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=HG002_chrY_T0001249;Name=UTY
HG002_chrY	CAT	exon	14141117	14141363	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=exon:HG002_chrY_T0001249:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14141117	14141363	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=CDS:HG002_chrY_T0001249:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14141364	14157552	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=intron:HG002_chrY_T0001249:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14157553	14157723	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=exon:HG002_chrY_T0001249:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14157553	14157723	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=CDS:HG002_chrY_T0001249:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14157724	14166813	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=intron:HG002_chrY_T0001249:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14166814	14166940	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=exon:HG002_chrY_T0001249:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14166814	14166940	.	-	1	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=CDS:HG002_chrY_T0001249:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14166941	14204242	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=intron:HG002_chrY_T0001249:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14204243	14204384	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=exon:HG002_chrY_T0001249:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14204243	14204384	.	-	2	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=CDS:HG002_chrY_T0001249:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14204385	14205492	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=intron:HG002_chrY_T0001249:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14205493	14205680	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=exon:HG002_chrY_T0001249:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14205493	14205680	.	-	1	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=CDS:HG002_chrY_T0001249:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14205681	14209411	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=intron:HG002_chrY_T0001249:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14209412	14209526	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=exon:HG002_chrY_T0001249:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14209412	14209526	.	-	2	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=CDS:HG002_chrY_T0001249:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14209527	14211933	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=intron:HG002_chrY_T0001249:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14211934	14212082	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=exon:HG002_chrY_T0001249:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14211934	14212082	.	-	1	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=CDS:HG002_chrY_T0001249:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212083	14212572	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=intron:HG002_chrY_T0001249:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14212573	14212647	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=exon:HG002_chrY_T0001249:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14212573	14212647	.	-	1	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=CDS:HG002_chrY_T0001249:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212648	14212720	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=intron:HG002_chrY_T0001249:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14212721	14212785	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=exon:HG002_chrY_T0001249:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14212721	14212785	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=CDS:HG002_chrY_T0001249:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212786	14230088	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=intron:HG002_chrY_T0001249:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14230089	14230294	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=exon:HG002_chrY_T0001249:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14230089	14230294	.	-	2	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=CDS:HG002_chrY_T0001249:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14230295	14231134	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=intron:HG002_chrY_T0001249:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14231135	14231240	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=exon:HG002_chrY_T0001249:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14231135	14231240	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=CDS:HG002_chrY_T0001249:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14231241	14232754	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=intron:HG002_chrY_T0001249:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14232755	14232884	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=exon:HG002_chrY_T0001249:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14232755	14232884	.	-	1	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=CDS:HG002_chrY_T0001249:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14232885	14242096	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=intron:HG002_chrY_T0001249:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14242097	14242869	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=exon:HG002_chrY_T0001249:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14242097	14242869	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=CDS:HG002_chrY_T0001249:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14242870	14261536	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=intron:HG002_chrY_T0001249:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14261537	14261932	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=exon:HG002_chrY_T0001249:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14261537	14261932	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=CDS:HG002_chrY_T0001249:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14261933	14262456	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=intron:HG002_chrY_T0001249:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14262457	14262552	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=exon:HG002_chrY_T0001249:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14262457	14262552	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=CDS:HG002_chrY_T0001249:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14262553	14264410	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=intron:HG002_chrY_T0001249:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14264411	14264503	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=exon:HG002_chrY_T0001249:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14264411	14264503	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=CDS:HG002_chrY_T0001249:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14264504	14264997	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=intron:HG002_chrY_T0001249:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14264998	14265153	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=exon:HG002_chrY_T0001249:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14264998	14265153	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=CDS:HG002_chrY_T0001249:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14265154	14265621	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=intron:HG002_chrY_T0001249:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14265622	14265756	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=exon:HG002_chrY_T0001249:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14265622	14265756	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=CDS:HG002_chrY_T0001249:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14265757	14266300	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=intron:HG002_chrY_T0001249:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14266301	14266321	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=exon:HG002_chrY_T0001249:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14266301	14266321	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG002_chrY_T0001249;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001249;transcript_name=HG002_chrY_T0001249;gene_name=UTY;ID=CDS:HG002_chrY_T0001249:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	14141118	14151902	1000	-	.	source_transcript=ENST00000684326.1;source_transcript_name=UTY-222;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000684326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684326.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684326.1,ENST00000684326.1;transcript_id=HG002_chrY_T0001250;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_G0000413;transcript_name=HG002_chrY_T0001250;gene_name=UTY;ID=HG002_chrY_T0001250;Name=UTY
HG002_chrY	CAT	exon	14141118	14141363	.	-	.	source_transcript=ENST00000684326.1;source_transcript_name=UTY-222;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000684326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684326.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684326.1,ENST00000684326.1;transcript_id=HG002_chrY_T0001250;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001250;transcript_name=HG002_chrY_T0001250;gene_name=UTY;ID=exon:HG002_chrY_T0001250:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14141364	14151750	.	-	.	source_transcript=ENST00000684326.1;source_transcript_name=UTY-222;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000684326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684326.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684326.1,ENST00000684326.1;transcript_id=HG002_chrY_T0001250;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001250;transcript_name=HG002_chrY_T0001250;gene_name=UTY;ID=intron:HG002_chrY_T0001250:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14151751	14151902	.	-	.	source_transcript=ENST00000684326.1;source_transcript_name=UTY-222;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000684326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684326.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684326.1,ENST00000684326.1;transcript_id=HG002_chrY_T0001250;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001250;transcript_name=HG002_chrY_T0001250;gene_name=UTY;ID=exon:HG002_chrY_T0001250:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	14141136	14386521	1000	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_G0000413;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=HG002_chrY_T0001251;Name=UTY
HG002_chrY	CAT	exon	14141136	14141363	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=exon:HG002_chrY_T0001251:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14141364	14157552	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=intron:HG002_chrY_T0001251:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14157553	14157723	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=exon:HG002_chrY_T0001251:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14157724	14166813	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=intron:HG002_chrY_T0001251:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14166814	14166940	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=exon:HG002_chrY_T0001251:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14166941	14204242	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=intron:HG002_chrY_T0001251:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14204243	14204384	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=exon:HG002_chrY_T0001251:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14204385	14205492	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=intron:HG002_chrY_T0001251:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14205493	14205680	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=exon:HG002_chrY_T0001251:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14205681	14209411	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=intron:HG002_chrY_T0001251:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14209412	14209526	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=exon:HG002_chrY_T0001251:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14209527	14211933	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=intron:HG002_chrY_T0001251:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14211934	14212082	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=exon:HG002_chrY_T0001251:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212083	14212572	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=intron:HG002_chrY_T0001251:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14212573	14212785	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=exon:HG002_chrY_T0001251:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212786	14230088	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=intron:HG002_chrY_T0001251:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14230089	14230294	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=exon:HG002_chrY_T0001251:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14230295	14231134	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=intron:HG002_chrY_T0001251:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14231135	14231240	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=exon:HG002_chrY_T0001251:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14231241	14232754	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=intron:HG002_chrY_T0001251:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14232755	14232884	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=exon:HG002_chrY_T0001251:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14232885	14240751	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=intron:HG002_chrY_T0001251:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14240752	14240874	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=exon:HG002_chrY_T0001251:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14240754	14240874	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=CDS:HG002_chrY_T0001251:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	14240754	14240756	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=stop_codon:HG002_chrY_T0001251;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14240875	14242096	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=intron:HG002_chrY_T0001251:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14242097	14242869	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=exon:HG002_chrY_T0001251:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14242097	14242869	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=CDS:HG002_chrY_T0001251:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14242870	14261536	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=intron:HG002_chrY_T0001251:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14261537	14261932	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=exon:HG002_chrY_T0001251:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14261537	14261932	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=CDS:HG002_chrY_T0001251:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14261933	14262456	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=intron:HG002_chrY_T0001251:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14262457	14262552	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=exon:HG002_chrY_T0001251:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14262457	14262552	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=CDS:HG002_chrY_T0001251:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14262553	14264410	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=intron:HG002_chrY_T0001251:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14264411	14264503	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=exon:HG002_chrY_T0001251:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14264411	14264503	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=CDS:HG002_chrY_T0001251:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14264504	14266300	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=intron:HG002_chrY_T0001251:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14266301	14266520	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=exon:HG002_chrY_T0001251:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14266301	14266520	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=CDS:HG002_chrY_T0001251:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14266521	14266963	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=intron:HG002_chrY_T0001251:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14266964	14267062	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=exon:HG002_chrY_T0001251:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14266964	14267062	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=CDS:HG002_chrY_T0001251:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14267063	14272800	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=intron:HG002_chrY_T0001251:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14272801	14272927	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=exon:HG002_chrY_T0001251:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14272801	14272927	.	-	2	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=CDS:HG002_chrY_T0001251:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14272928	14275789	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=intron:HG002_chrY_T0001251:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14275790	14275883	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=exon:HG002_chrY_T0001251:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14275790	14275883	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=CDS:HG002_chrY_T0001251:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14275884	14300394	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=intron:HG002_chrY_T0001251:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14300395	14300429	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=exon:HG002_chrY_T0001251:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14300395	14300429	.	-	2	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=CDS:HG002_chrY_T0001251:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14300430	14303453	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=intron:HG002_chrY_T0001251:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14303454	14303508	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=exon:HG002_chrY_T0001251:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14303454	14303508	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=CDS:HG002_chrY_T0001251:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14303509	14317527	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=intron:HG002_chrY_T0001251:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14317528	14317648	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=exon:HG002_chrY_T0001251:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14317528	14317648	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=CDS:HG002_chrY_T0001251:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14317649	14321269	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=intron:HG002_chrY_T0001251:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14321270	14321328	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=exon:HG002_chrY_T0001251:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14321270	14321328	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=CDS:HG002_chrY_T0001251:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14321329	14355535	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=intron:HG002_chrY_T0001251:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14355536	14355585	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=exon:HG002_chrY_T0001251:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14355536	14355585	.	-	2	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=CDS:HG002_chrY_T0001251:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14355586	14376639	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=intron:HG002_chrY_T0001251:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14376640	14376748	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=exon:HG002_chrY_T0001251:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14376640	14376748	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=CDS:HG002_chrY_T0001251:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14376749	14385772	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=intron:HG002_chrY_T0001251:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14385773	14385836	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=exon:HG002_chrY_T0001251:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14385773	14385836	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=CDS:HG002_chrY_T0001251:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14385837	14386032	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=intron:HG002_chrY_T0001251:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14386033	14386521	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=exon:HG002_chrY_T0001251:27;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14386033	14386184	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=CDS:HG002_chrY_T0001251:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	14386182	14386184	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG002_chrY_T0001251;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001251;transcript_name=HG002_chrY_T0001251;gene_name=UTY;ID=start_codon:HG002_chrY_T0001251;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	14141136	14242663	1000	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_G0000413;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=HG002_chrY_T0001252;Name=UTY
HG002_chrY	CAT	exon	14141136	14141363	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=exon:HG002_chrY_T0001252:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14141136	14141363	.	-	0	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=CDS:HG002_chrY_T0001252:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14141364	14166813	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=intron:HG002_chrY_T0001252:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14166814	14166940	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=exon:HG002_chrY_T0001252:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14166814	14166940	.	-	1	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=CDS:HG002_chrY_T0001252:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14166941	14204242	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=intron:HG002_chrY_T0001252:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14204243	14204384	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=exon:HG002_chrY_T0001252:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14204243	14204384	.	-	2	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=CDS:HG002_chrY_T0001252:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14204385	14205492	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=intron:HG002_chrY_T0001252:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14205493	14205680	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=exon:HG002_chrY_T0001252:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14205493	14205680	.	-	1	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=CDS:HG002_chrY_T0001252:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14205681	14209411	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=intron:HG002_chrY_T0001252:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14209412	14209526	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=exon:HG002_chrY_T0001252:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14209412	14209526	.	-	2	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=CDS:HG002_chrY_T0001252:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14209527	14211933	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=intron:HG002_chrY_T0001252:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14211934	14212082	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=exon:HG002_chrY_T0001252:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14211934	14212082	.	-	1	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=CDS:HG002_chrY_T0001252:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212083	14212572	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=intron:HG002_chrY_T0001252:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14212573	14212647	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=exon:HG002_chrY_T0001252:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14212573	14212647	.	-	1	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=CDS:HG002_chrY_T0001252:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212648	14212720	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=intron:HG002_chrY_T0001252:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14212721	14212785	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=exon:HG002_chrY_T0001252:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14212721	14212785	.	-	0	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=CDS:HG002_chrY_T0001252:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212786	14230088	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=intron:HG002_chrY_T0001252:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14230089	14230294	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=exon:HG002_chrY_T0001252:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14230089	14230294	.	-	2	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=CDS:HG002_chrY_T0001252:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14230295	14231134	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=intron:HG002_chrY_T0001252:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14231135	14231240	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=exon:HG002_chrY_T0001252:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14231135	14231240	.	-	0	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=CDS:HG002_chrY_T0001252:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14231241	14232754	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=intron:HG002_chrY_T0001252:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14232755	14232884	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=exon:HG002_chrY_T0001252:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14232755	14232884	.	-	1	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=CDS:HG002_chrY_T0001252:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14232885	14242096	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=intron:HG002_chrY_T0001252:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14242097	14242663	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=exon:HG002_chrY_T0001252:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14242097	14242663	.	-	1	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG002_chrY_T0001252;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001252;transcript_name=HG002_chrY_T0001252;gene_name=UTY;ID=CDS:HG002_chrY_T0001252:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	14141136	14386521	1000	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_G0000413;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=HG002_chrY_T0001253;Name=UTY
HG002_chrY	CAT	exon	14141136	14141363	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=exon:HG002_chrY_T0001253:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14141364	14157552	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=intron:HG002_chrY_T0001253:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14157553	14157723	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=exon:HG002_chrY_T0001253:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14157724	14166813	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=intron:HG002_chrY_T0001253:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14166814	14166940	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=exon:HG002_chrY_T0001253:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14166941	14204242	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=intron:HG002_chrY_T0001253:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14204243	14204384	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=exon:HG002_chrY_T0001253:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14204385	14205492	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=intron:HG002_chrY_T0001253:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14205493	14205680	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=exon:HG002_chrY_T0001253:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14205681	14209411	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=intron:HG002_chrY_T0001253:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14209412	14209526	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=exon:HG002_chrY_T0001253:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14209527	14211933	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=intron:HG002_chrY_T0001253:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14211934	14212082	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=exon:HG002_chrY_T0001253:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212083	14212572	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=intron:HG002_chrY_T0001253:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14212573	14212647	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=exon:HG002_chrY_T0001253:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212648	14212720	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=intron:HG002_chrY_T0001253:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14212721	14212785	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=exon:HG002_chrY_T0001253:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212786	14230088	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=intron:HG002_chrY_T0001253:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14230089	14230294	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=exon:HG002_chrY_T0001253:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14230295	14231134	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=intron:HG002_chrY_T0001253:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14231135	14231240	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=exon:HG002_chrY_T0001253:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14231241	14232754	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=intron:HG002_chrY_T0001253:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14232755	14232884	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=exon:HG002_chrY_T0001253:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14232885	14240751	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=intron:HG002_chrY_T0001253:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14240752	14240874	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=exon:HG002_chrY_T0001253:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14240754	14240874	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=CDS:HG002_chrY_T0001253:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	14240754	14240756	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=stop_codon:HG002_chrY_T0001253;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14240875	14242096	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=intron:HG002_chrY_T0001253:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14242097	14242869	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=exon:HG002_chrY_T0001253:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14242097	14242869	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=CDS:HG002_chrY_T0001253:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14242870	14261536	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=intron:HG002_chrY_T0001253:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14261537	14261932	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=exon:HG002_chrY_T0001253:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14261537	14261932	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=CDS:HG002_chrY_T0001253:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14261933	14262456	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=intron:HG002_chrY_T0001253:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14262457	14262552	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=exon:HG002_chrY_T0001253:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14262457	14262552	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=CDS:HG002_chrY_T0001253:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14262553	14264410	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=intron:HG002_chrY_T0001253:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14264411	14264503	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=exon:HG002_chrY_T0001253:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14264411	14264503	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=CDS:HG002_chrY_T0001253:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14264504	14266300	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=intron:HG002_chrY_T0001253:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14266301	14266520	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=exon:HG002_chrY_T0001253:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14266301	14266520	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=CDS:HG002_chrY_T0001253:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14266521	14266963	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=intron:HG002_chrY_T0001253:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14266964	14267062	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=exon:HG002_chrY_T0001253:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14266964	14267062	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=CDS:HG002_chrY_T0001253:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14267063	14272800	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=intron:HG002_chrY_T0001253:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14272801	14272927	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=exon:HG002_chrY_T0001253:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14272801	14272927	.	-	2	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=CDS:HG002_chrY_T0001253:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14272928	14275789	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=intron:HG002_chrY_T0001253:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14275790	14275883	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=exon:HG002_chrY_T0001253:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14275790	14275883	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=CDS:HG002_chrY_T0001253:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14275884	14300394	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=intron:HG002_chrY_T0001253:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14300395	14300429	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=exon:HG002_chrY_T0001253:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14300395	14300429	.	-	2	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=CDS:HG002_chrY_T0001253:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14300430	14303453	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=intron:HG002_chrY_T0001253:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14303454	14303508	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=exon:HG002_chrY_T0001253:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14303454	14303508	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=CDS:HG002_chrY_T0001253:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14303509	14317527	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=intron:HG002_chrY_T0001253:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14317528	14317648	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=exon:HG002_chrY_T0001253:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14317528	14317648	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=CDS:HG002_chrY_T0001253:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14317649	14321269	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=intron:HG002_chrY_T0001253:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14321270	14321328	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=exon:HG002_chrY_T0001253:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14321270	14321328	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=CDS:HG002_chrY_T0001253:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14321329	14355535	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=intron:HG002_chrY_T0001253:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14355536	14355585	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=exon:HG002_chrY_T0001253:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14355536	14355585	.	-	2	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=CDS:HG002_chrY_T0001253:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14355586	14376639	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=intron:HG002_chrY_T0001253:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14376640	14376748	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=exon:HG002_chrY_T0001253:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14376640	14376748	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=CDS:HG002_chrY_T0001253:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14376749	14385772	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=intron:HG002_chrY_T0001253:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14385773	14385836	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=exon:HG002_chrY_T0001253:27;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14385773	14385836	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=CDS:HG002_chrY_T0001253:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14385837	14386032	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=intron:HG002_chrY_T0001253:27;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14386033	14386521	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=exon:HG002_chrY_T0001253:28;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14386033	14386184	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=CDS:HG002_chrY_T0001253:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	14386182	14386184	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG002_chrY_T0001253;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001253;transcript_name=HG002_chrY_T0001253;gene_name=UTY;ID=start_codon:HG002_chrY_T0001253;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	14154915	14387192	100	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_G0000413;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=HG002_chrY_T0001254;Name=UTY
HG002_chrY	CAT	exon	14154915	14156418	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=exon:HG002_chrY_T0001254:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14156392	14156418	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=CDS:HG002_chrY_T0001254:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	14156392	14156394	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=stop_codon:HG002_chrY_T0001254;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14156419	14157552	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=intron:HG002_chrY_T0001254:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14157553	14157723	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=exon:HG002_chrY_T0001254:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14157553	14157723	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=CDS:HG002_chrY_T0001254:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14157724	14166813	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=intron:HG002_chrY_T0001254:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14166814	14166940	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=exon:HG002_chrY_T0001254:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14166814	14166940	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=CDS:HG002_chrY_T0001254:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14166941	14204242	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=intron:HG002_chrY_T0001254:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14204243	14204384	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=exon:HG002_chrY_T0001254:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14204243	14204384	.	-	2	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=CDS:HG002_chrY_T0001254:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14204385	14205492	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=intron:HG002_chrY_T0001254:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14205493	14205680	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=exon:HG002_chrY_T0001254:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14205493	14205680	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=CDS:HG002_chrY_T0001254:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14205681	14209411	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=intron:HG002_chrY_T0001254:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14209412	14209526	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=exon:HG002_chrY_T0001254:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14209412	14209526	.	-	2	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=CDS:HG002_chrY_T0001254:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14209527	14211933	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=intron:HG002_chrY_T0001254:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14211934	14212082	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=exon:HG002_chrY_T0001254:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14211934	14212082	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=CDS:HG002_chrY_T0001254:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212083	14212572	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=intron:HG002_chrY_T0001254:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14212573	14212647	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=exon:HG002_chrY_T0001254:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14212573	14212647	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=CDS:HG002_chrY_T0001254:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212648	14212720	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=intron:HG002_chrY_T0001254:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14212721	14212785	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=exon:HG002_chrY_T0001254:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14212721	14212785	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=CDS:HG002_chrY_T0001254:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212786	14230088	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=intron:HG002_chrY_T0001254:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14230089	14230294	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=exon:HG002_chrY_T0001254:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14230089	14230294	.	-	2	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=CDS:HG002_chrY_T0001254:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14230295	14231134	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=intron:HG002_chrY_T0001254:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14231135	14231240	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=exon:HG002_chrY_T0001254:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14231135	14231240	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=CDS:HG002_chrY_T0001254:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14231241	14232754	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=intron:HG002_chrY_T0001254:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14232755	14232884	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=exon:HG002_chrY_T0001254:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14232755	14232884	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=CDS:HG002_chrY_T0001254:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14232885	14242096	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=intron:HG002_chrY_T0001254:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14242097	14242869	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=exon:HG002_chrY_T0001254:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14242097	14242869	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=CDS:HG002_chrY_T0001254:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14242870	14261536	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=intron:HG002_chrY_T0001254:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14261537	14261932	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=exon:HG002_chrY_T0001254:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14261537	14261932	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=CDS:HG002_chrY_T0001254:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14261933	14262456	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=intron:HG002_chrY_T0001254:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14262457	14262552	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=exon:HG002_chrY_T0001254:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14262457	14262552	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=CDS:HG002_chrY_T0001254:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14262553	14264410	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=intron:HG002_chrY_T0001254:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14264411	14264503	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=exon:HG002_chrY_T0001254:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14264411	14264503	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=CDS:HG002_chrY_T0001254:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14264504	14266300	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=intron:HG002_chrY_T0001254:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14266301	14266520	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=exon:HG002_chrY_T0001254:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14266301	14266520	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=CDS:HG002_chrY_T0001254:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14266521	14266963	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=intron:HG002_chrY_T0001254:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14266964	14267062	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=exon:HG002_chrY_T0001254:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14266964	14267062	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=CDS:HG002_chrY_T0001254:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14267063	14272800	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=intron:HG002_chrY_T0001254:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14272801	14272927	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=exon:HG002_chrY_T0001254:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14272801	14272927	.	-	2	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=CDS:HG002_chrY_T0001254:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14272928	14275789	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=intron:HG002_chrY_T0001254:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14275790	14275883	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=exon:HG002_chrY_T0001254:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14275790	14275883	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=CDS:HG002_chrY_T0001254:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14275884	14300394	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=intron:HG002_chrY_T0001254:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14300395	14300429	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=exon:HG002_chrY_T0001254:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14300395	14300429	.	-	2	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=CDS:HG002_chrY_T0001254:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14300430	14303453	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=intron:HG002_chrY_T0001254:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14303454	14303508	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=exon:HG002_chrY_T0001254:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14303454	14303508	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=CDS:HG002_chrY_T0001254:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14303509	14317527	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=intron:HG002_chrY_T0001254:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14317528	14317648	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=exon:HG002_chrY_T0001254:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14317528	14317648	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=CDS:HG002_chrY_T0001254:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14317649	14321269	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=intron:HG002_chrY_T0001254:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14321270	14321328	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=exon:HG002_chrY_T0001254:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14321270	14321328	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=CDS:HG002_chrY_T0001254:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14321329	14355535	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=intron:HG002_chrY_T0001254:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14355536	14355585	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=exon:HG002_chrY_T0001254:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14355536	14355585	.	-	2	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=CDS:HG002_chrY_T0001254:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14355586	14376639	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=intron:HG002_chrY_T0001254:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14376640	14376748	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=exon:HG002_chrY_T0001254:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14376640	14376748	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=CDS:HG002_chrY_T0001254:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14376749	14385772	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=intron:HG002_chrY_T0001254:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14385773	14385836	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=exon:HG002_chrY_T0001254:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14385773	14385836	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=CDS:HG002_chrY_T0001254:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14385837	14386032	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=intron:HG002_chrY_T0001254:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14386033	14387192	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=exon:HG002_chrY_T0001254:27;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14386033	14386184	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=CDS:HG002_chrY_T0001254:27;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	14386182	14386184	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG002_chrY_T0001254;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001254;transcript_name=HG002_chrY_T0001254;gene_name=UTY;ID=start_codon:HG002_chrY_T0001254;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	14154921	14386552	100	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_G0000413;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=HG002_chrY_T0001255;Name=UTY
HG002_chrY	CAT	exon	14154921	14156418	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=exon:HG002_chrY_T0001255:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14156392	14156418	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=CDS:HG002_chrY_T0001255:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	14156392	14156394	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=stop_codon:HG002_chrY_T0001255;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14156419	14157552	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=intron:HG002_chrY_T0001255:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14157553	14157723	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=exon:HG002_chrY_T0001255:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14157553	14157723	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=CDS:HG002_chrY_T0001255:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14157724	14166813	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=intron:HG002_chrY_T0001255:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14166814	14166940	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=exon:HG002_chrY_T0001255:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14166814	14166940	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=CDS:HG002_chrY_T0001255:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14166941	14204242	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=intron:HG002_chrY_T0001255:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14204243	14204384	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=exon:HG002_chrY_T0001255:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14204243	14204384	.	-	2	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=CDS:HG002_chrY_T0001255:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14204385	14205492	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=intron:HG002_chrY_T0001255:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14205493	14205680	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=exon:HG002_chrY_T0001255:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14205493	14205680	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=CDS:HG002_chrY_T0001255:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14205681	14209411	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=intron:HG002_chrY_T0001255:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14209412	14209526	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=exon:HG002_chrY_T0001255:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14209412	14209526	.	-	2	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=CDS:HG002_chrY_T0001255:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14209527	14211933	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=intron:HG002_chrY_T0001255:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14211934	14212082	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=exon:HG002_chrY_T0001255:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14211934	14212082	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=CDS:HG002_chrY_T0001255:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212083	14212572	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=intron:HG002_chrY_T0001255:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14212573	14212647	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=exon:HG002_chrY_T0001255:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14212573	14212647	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=CDS:HG002_chrY_T0001255:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212648	14212720	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=intron:HG002_chrY_T0001255:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14212721	14212785	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=exon:HG002_chrY_T0001255:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14212721	14212785	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=CDS:HG002_chrY_T0001255:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212786	14230088	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=intron:HG002_chrY_T0001255:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14230089	14230294	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=exon:HG002_chrY_T0001255:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14230089	14230294	.	-	2	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=CDS:HG002_chrY_T0001255:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14230295	14231134	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=intron:HG002_chrY_T0001255:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14231135	14231240	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=exon:HG002_chrY_T0001255:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14231135	14231240	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=CDS:HG002_chrY_T0001255:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14231241	14232754	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=intron:HG002_chrY_T0001255:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14232755	14232884	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=exon:HG002_chrY_T0001255:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14232755	14232884	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=CDS:HG002_chrY_T0001255:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14232885	14242096	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=intron:HG002_chrY_T0001255:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14242097	14242869	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=exon:HG002_chrY_T0001255:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14242097	14242869	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=CDS:HG002_chrY_T0001255:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14242870	14261536	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=intron:HG002_chrY_T0001255:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14261537	14261932	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=exon:HG002_chrY_T0001255:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14261537	14261932	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=CDS:HG002_chrY_T0001255:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14261933	14262456	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=intron:HG002_chrY_T0001255:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14262457	14262552	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=exon:HG002_chrY_T0001255:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14262457	14262552	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=CDS:HG002_chrY_T0001255:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14262553	14264410	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=intron:HG002_chrY_T0001255:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14264411	14264503	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=exon:HG002_chrY_T0001255:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14264411	14264503	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=CDS:HG002_chrY_T0001255:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14264504	14264997	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=intron:HG002_chrY_T0001255:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14264998	14265153	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=exon:HG002_chrY_T0001255:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14264998	14265153	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=CDS:HG002_chrY_T0001255:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14265154	14265621	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=intron:HG002_chrY_T0001255:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14265622	14265756	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=exon:HG002_chrY_T0001255:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14265622	14265756	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=CDS:HG002_chrY_T0001255:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14265757	14266300	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=intron:HG002_chrY_T0001255:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14266301	14266520	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=exon:HG002_chrY_T0001255:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14266301	14266520	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=CDS:HG002_chrY_T0001255:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14266521	14266963	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=intron:HG002_chrY_T0001255:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14266964	14267062	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=exon:HG002_chrY_T0001255:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14266964	14267062	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=CDS:HG002_chrY_T0001255:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14267063	14272800	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=intron:HG002_chrY_T0001255:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14272801	14272927	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=exon:HG002_chrY_T0001255:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14272801	14272927	.	-	2	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=CDS:HG002_chrY_T0001255:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14272928	14275789	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=intron:HG002_chrY_T0001255:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14275790	14275883	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=exon:HG002_chrY_T0001255:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14275790	14275883	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=CDS:HG002_chrY_T0001255:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14275884	14300394	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=intron:HG002_chrY_T0001255:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14300395	14300429	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=exon:HG002_chrY_T0001255:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14300395	14300429	.	-	2	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=CDS:HG002_chrY_T0001255:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14300430	14303453	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=intron:HG002_chrY_T0001255:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14303454	14303508	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=exon:HG002_chrY_T0001255:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14303454	14303508	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=CDS:HG002_chrY_T0001255:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14303509	14317527	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=intron:HG002_chrY_T0001255:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14317528	14317648	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=exon:HG002_chrY_T0001255:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14317528	14317648	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=CDS:HG002_chrY_T0001255:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14317649	14321269	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=intron:HG002_chrY_T0001255:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14321270	14321328	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=exon:HG002_chrY_T0001255:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14321270	14321328	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=CDS:HG002_chrY_T0001255:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14321329	14355535	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=intron:HG002_chrY_T0001255:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14355536	14355585	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=exon:HG002_chrY_T0001255:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14355536	14355585	.	-	2	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=CDS:HG002_chrY_T0001255:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14355586	14376639	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=intron:HG002_chrY_T0001255:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14376640	14376748	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=exon:HG002_chrY_T0001255:27;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14376640	14376748	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=CDS:HG002_chrY_T0001255:27;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14376749	14385772	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=intron:HG002_chrY_T0001255:27;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14385773	14385836	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=exon:HG002_chrY_T0001255:28;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14385773	14385836	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=CDS:HG002_chrY_T0001255:28;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14385837	14386032	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=intron:HG002_chrY_T0001255:28;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14386033	14386552	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=exon:HG002_chrY_T0001255:29;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14386033	14386184	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=CDS:HG002_chrY_T0001255:29;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	14386182	14386184	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG002_chrY_T0001255;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001255;transcript_name=HG002_chrY_T0001255;gene_name=UTY;ID=start_codon:HG002_chrY_T0001255;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	14155678	14386510	100	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_G0000413;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=HG002_chrY_T0001256;Name=UTY
HG002_chrY	CAT	exon	14155678	14156348	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=exon:HG002_chrY_T0001256:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14156322	14156348	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=CDS:HG002_chrY_T0001256:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	14156322	14156324	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=stop_codon:HG002_chrY_T0001256;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14156349	14157552	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=intron:HG002_chrY_T0001256:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14157553	14157723	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=exon:HG002_chrY_T0001256:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14157553	14157723	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=CDS:HG002_chrY_T0001256:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14157724	14166813	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=intron:HG002_chrY_T0001256:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14166814	14166940	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=exon:HG002_chrY_T0001256:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14166814	14166940	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=CDS:HG002_chrY_T0001256:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14166941	14204242	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=intron:HG002_chrY_T0001256:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14204243	14204384	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=exon:HG002_chrY_T0001256:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14204243	14204384	.	-	2	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=CDS:HG002_chrY_T0001256:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14204385	14205492	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=intron:HG002_chrY_T0001256:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14205493	14205680	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=exon:HG002_chrY_T0001256:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14205493	14205680	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=CDS:HG002_chrY_T0001256:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14205681	14209411	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=intron:HG002_chrY_T0001256:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14209412	14209526	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=exon:HG002_chrY_T0001256:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14209412	14209526	.	-	2	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=CDS:HG002_chrY_T0001256:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14209527	14211933	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=intron:HG002_chrY_T0001256:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14211934	14212082	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=exon:HG002_chrY_T0001256:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14211934	14212082	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=CDS:HG002_chrY_T0001256:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212083	14212572	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=intron:HG002_chrY_T0001256:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14212573	14212647	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=exon:HG002_chrY_T0001256:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14212573	14212647	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=CDS:HG002_chrY_T0001256:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212648	14212720	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=intron:HG002_chrY_T0001256:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14212721	14212785	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=exon:HG002_chrY_T0001256:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14212721	14212785	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=CDS:HG002_chrY_T0001256:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212786	14230088	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=intron:HG002_chrY_T0001256:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14230089	14230294	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=exon:HG002_chrY_T0001256:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14230089	14230294	.	-	2	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=CDS:HG002_chrY_T0001256:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14230295	14231134	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=intron:HG002_chrY_T0001256:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14231135	14231240	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=exon:HG002_chrY_T0001256:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14231135	14231240	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=CDS:HG002_chrY_T0001256:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14231241	14232754	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=intron:HG002_chrY_T0001256:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14232755	14232884	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=exon:HG002_chrY_T0001256:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14232755	14232884	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=CDS:HG002_chrY_T0001256:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14232885	14242096	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=intron:HG002_chrY_T0001256:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14242097	14242869	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=exon:HG002_chrY_T0001256:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14242097	14242869	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=CDS:HG002_chrY_T0001256:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14242870	14261536	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=intron:HG002_chrY_T0001256:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14261537	14261932	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=exon:HG002_chrY_T0001256:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14261537	14261932	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=CDS:HG002_chrY_T0001256:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14261933	14262456	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=intron:HG002_chrY_T0001256:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14262457	14262552	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=exon:HG002_chrY_T0001256:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14262457	14262552	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=CDS:HG002_chrY_T0001256:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14262553	14264410	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=intron:HG002_chrY_T0001256:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14264411	14264503	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=exon:HG002_chrY_T0001256:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14264411	14264503	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=CDS:HG002_chrY_T0001256:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14264504	14264997	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=intron:HG002_chrY_T0001256:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14264998	14265087	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=exon:HG002_chrY_T0001256:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14264998	14265087	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=CDS:HG002_chrY_T0001256:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14265088	14265621	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=intron:HG002_chrY_T0001256:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14265622	14265756	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=exon:HG002_chrY_T0001256:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14265622	14265756	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=CDS:HG002_chrY_T0001256:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14265757	14266300	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=intron:HG002_chrY_T0001256:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14266301	14266520	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=exon:HG002_chrY_T0001256:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14266301	14266520	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=CDS:HG002_chrY_T0001256:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14266521	14266963	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=intron:HG002_chrY_T0001256:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14266964	14267062	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=exon:HG002_chrY_T0001256:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14266964	14267062	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=CDS:HG002_chrY_T0001256:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14267063	14272800	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=intron:HG002_chrY_T0001256:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14272801	14272927	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=exon:HG002_chrY_T0001256:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14272801	14272927	.	-	2	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=CDS:HG002_chrY_T0001256:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14272928	14275789	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=intron:HG002_chrY_T0001256:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14275790	14275883	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=exon:HG002_chrY_T0001256:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14275790	14275883	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=CDS:HG002_chrY_T0001256:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14275884	14300394	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=intron:HG002_chrY_T0001256:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14300395	14300429	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=exon:HG002_chrY_T0001256:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14300395	14300429	.	-	2	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=CDS:HG002_chrY_T0001256:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14300430	14303453	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=intron:HG002_chrY_T0001256:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14303454	14303508	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=exon:HG002_chrY_T0001256:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14303454	14303508	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=CDS:HG002_chrY_T0001256:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14303509	14317527	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=intron:HG002_chrY_T0001256:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14317528	14317648	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=exon:HG002_chrY_T0001256:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14317528	14317648	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=CDS:HG002_chrY_T0001256:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14317649	14321269	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=intron:HG002_chrY_T0001256:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14321270	14321328	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=exon:HG002_chrY_T0001256:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14321270	14321328	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=CDS:HG002_chrY_T0001256:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14321329	14355535	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=intron:HG002_chrY_T0001256:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14355536	14355585	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=exon:HG002_chrY_T0001256:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14355536	14355585	.	-	2	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=CDS:HG002_chrY_T0001256:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14355586	14376639	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=intron:HG002_chrY_T0001256:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14376640	14376748	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=exon:HG002_chrY_T0001256:27;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14376640	14376748	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=CDS:HG002_chrY_T0001256:27;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14376749	14385772	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=intron:HG002_chrY_T0001256:27;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14385773	14385836	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=exon:HG002_chrY_T0001256:28;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14385773	14385836	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=CDS:HG002_chrY_T0001256:28;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14385837	14386032	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=intron:HG002_chrY_T0001256:28;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14386033	14386510	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=exon:HG002_chrY_T0001256:29;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14386033	14386184	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=CDS:HG002_chrY_T0001256:29;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	14386182	14386184	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG002_chrY_T0001256;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001256;transcript_name=HG002_chrY_T0001256;gene_name=UTY;ID=start_codon:HG002_chrY_T0001256;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	14156392	14386184	100	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_G0000413;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=HG002_chrY_T0001257;Name=UTY
HG002_chrY	CAT	exon	14156392	14156418	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=exon:HG002_chrY_T0001257:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14156392	14156418	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=CDS:HG002_chrY_T0001257:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	14156392	14156394	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=stop_codon:HG002_chrY_T0001257;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14156419	14166813	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=intron:HG002_chrY_T0001257:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14166814	14166940	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=exon:HG002_chrY_T0001257:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14166814	14166940	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=CDS:HG002_chrY_T0001257:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14166941	14204242	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=intron:HG002_chrY_T0001257:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14204243	14204384	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=exon:HG002_chrY_T0001257:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14204243	14204384	.	-	2	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=CDS:HG002_chrY_T0001257:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14204385	14205492	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=intron:HG002_chrY_T0001257:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14205493	14205680	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=exon:HG002_chrY_T0001257:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14205493	14205680	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=CDS:HG002_chrY_T0001257:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14205681	14209411	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=intron:HG002_chrY_T0001257:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14209412	14209526	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=exon:HG002_chrY_T0001257:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14209412	14209526	.	-	2	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=CDS:HG002_chrY_T0001257:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14209527	14211933	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=intron:HG002_chrY_T0001257:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14211934	14212082	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=exon:HG002_chrY_T0001257:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14211934	14212082	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=CDS:HG002_chrY_T0001257:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212083	14212572	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=intron:HG002_chrY_T0001257:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14212573	14212647	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=exon:HG002_chrY_T0001257:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14212573	14212647	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=CDS:HG002_chrY_T0001257:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212648	14212720	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=intron:HG002_chrY_T0001257:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14212721	14212785	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=exon:HG002_chrY_T0001257:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14212721	14212785	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=CDS:HG002_chrY_T0001257:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212786	14230088	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=intron:HG002_chrY_T0001257:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14230089	14230294	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=exon:HG002_chrY_T0001257:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14230089	14230294	.	-	2	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=CDS:HG002_chrY_T0001257:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14230295	14231134	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=intron:HG002_chrY_T0001257:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14231135	14231240	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=exon:HG002_chrY_T0001257:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14231135	14231240	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=CDS:HG002_chrY_T0001257:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14231241	14232754	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=intron:HG002_chrY_T0001257:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14232755	14232884	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=exon:HG002_chrY_T0001257:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14232755	14232884	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=CDS:HG002_chrY_T0001257:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14232885	14242096	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=intron:HG002_chrY_T0001257:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14242097	14242869	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=exon:HG002_chrY_T0001257:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14242097	14242869	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=CDS:HG002_chrY_T0001257:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14242870	14261536	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=intron:HG002_chrY_T0001257:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14261537	14261932	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=exon:HG002_chrY_T0001257:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14261537	14261932	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=CDS:HG002_chrY_T0001257:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14261933	14262456	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=intron:HG002_chrY_T0001257:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14262457	14262552	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=exon:HG002_chrY_T0001257:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14262457	14262552	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=CDS:HG002_chrY_T0001257:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14262553	14264410	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=intron:HG002_chrY_T0001257:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14264411	14264503	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=exon:HG002_chrY_T0001257:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14264411	14264503	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=CDS:HG002_chrY_T0001257:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14264504	14265621	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=intron:HG002_chrY_T0001257:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14265622	14265756	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=exon:HG002_chrY_T0001257:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14265622	14265756	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=CDS:HG002_chrY_T0001257:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14265757	14266300	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=intron:HG002_chrY_T0001257:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14266301	14266520	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=exon:HG002_chrY_T0001257:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14266301	14266520	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=CDS:HG002_chrY_T0001257:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14266521	14266963	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=intron:HG002_chrY_T0001257:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14266964	14267062	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=exon:HG002_chrY_T0001257:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14266964	14267062	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=CDS:HG002_chrY_T0001257:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14267063	14272800	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=intron:HG002_chrY_T0001257:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14272801	14272927	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=exon:HG002_chrY_T0001257:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14272801	14272927	.	-	2	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=CDS:HG002_chrY_T0001257:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14272928	14275789	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=intron:HG002_chrY_T0001257:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14275790	14275883	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=exon:HG002_chrY_T0001257:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14275790	14275883	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=CDS:HG002_chrY_T0001257:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14275884	14300394	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=intron:HG002_chrY_T0001257:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14300395	14300429	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=exon:HG002_chrY_T0001257:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14300395	14300429	.	-	2	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=CDS:HG002_chrY_T0001257:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14300430	14303453	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=intron:HG002_chrY_T0001257:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14303454	14303508	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=exon:HG002_chrY_T0001257:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14303454	14303508	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=CDS:HG002_chrY_T0001257:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14303509	14317527	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=intron:HG002_chrY_T0001257:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14317528	14317648	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=exon:HG002_chrY_T0001257:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14317528	14317648	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=CDS:HG002_chrY_T0001257:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14317649	14321269	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=intron:HG002_chrY_T0001257:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14321270	14321328	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=exon:HG002_chrY_T0001257:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14321270	14321328	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=CDS:HG002_chrY_T0001257:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14321329	14355535	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=intron:HG002_chrY_T0001257:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14355536	14355585	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=exon:HG002_chrY_T0001257:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14355536	14355585	.	-	2	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=CDS:HG002_chrY_T0001257:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14355586	14376639	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=intron:HG002_chrY_T0001257:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14376640	14376748	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=exon:HG002_chrY_T0001257:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14376640	14376748	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=CDS:HG002_chrY_T0001257:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14376749	14385772	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=intron:HG002_chrY_T0001257:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14385773	14385836	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=exon:HG002_chrY_T0001257:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14385773	14385836	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=CDS:HG002_chrY_T0001257:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14385837	14386032	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=intron:HG002_chrY_T0001257:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14386033	14386184	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=exon:HG002_chrY_T0001257:27;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14386033	14386184	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=CDS:HG002_chrY_T0001257:27;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	14386182	14386184	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG002_chrY_T0001257;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001257;transcript_name=HG002_chrY_T0001257;gene_name=UTY;ID=start_codon:HG002_chrY_T0001257;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	14156392	14386184	100	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_G0000413;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=HG002_chrY_T0001258;Name=UTY
HG002_chrY	CAT	exon	14156392	14156418	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=exon:HG002_chrY_T0001258:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14156392	14156418	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=CDS:HG002_chrY_T0001258:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	14156392	14156394	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=stop_codon:HG002_chrY_T0001258;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14156419	14157552	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=intron:HG002_chrY_T0001258:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14157553	14157723	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=exon:HG002_chrY_T0001258:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14157553	14157723	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=CDS:HG002_chrY_T0001258:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14157724	14166813	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=intron:HG002_chrY_T0001258:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14166814	14166940	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=exon:HG002_chrY_T0001258:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14166814	14166940	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=CDS:HG002_chrY_T0001258:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14166941	14204242	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=intron:HG002_chrY_T0001258:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14204243	14204384	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=exon:HG002_chrY_T0001258:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14204243	14204384	.	-	2	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=CDS:HG002_chrY_T0001258:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14204385	14205492	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=intron:HG002_chrY_T0001258:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14205493	14205680	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=exon:HG002_chrY_T0001258:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14205493	14205680	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=CDS:HG002_chrY_T0001258:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14205681	14209411	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=intron:HG002_chrY_T0001258:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14209412	14209526	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=exon:HG002_chrY_T0001258:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14209412	14209526	.	-	2	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=CDS:HG002_chrY_T0001258:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14209527	14211933	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=intron:HG002_chrY_T0001258:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14211934	14212082	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=exon:HG002_chrY_T0001258:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14211934	14212082	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=CDS:HG002_chrY_T0001258:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212083	14212572	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=intron:HG002_chrY_T0001258:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14212573	14212647	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=exon:HG002_chrY_T0001258:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14212573	14212647	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=CDS:HG002_chrY_T0001258:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212648	14212720	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=intron:HG002_chrY_T0001258:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14212721	14212785	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=exon:HG002_chrY_T0001258:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14212721	14212785	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=CDS:HG002_chrY_T0001258:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212786	14230088	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=intron:HG002_chrY_T0001258:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14230089	14230294	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=exon:HG002_chrY_T0001258:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14230089	14230294	.	-	2	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=CDS:HG002_chrY_T0001258:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14230295	14231134	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=intron:HG002_chrY_T0001258:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14231135	14231240	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=exon:HG002_chrY_T0001258:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14231135	14231240	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=CDS:HG002_chrY_T0001258:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14231241	14232754	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=intron:HG002_chrY_T0001258:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14232755	14232884	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=exon:HG002_chrY_T0001258:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14232755	14232884	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=CDS:HG002_chrY_T0001258:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14232885	14242096	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=intron:HG002_chrY_T0001258:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14242097	14242869	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=exon:HG002_chrY_T0001258:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14242097	14242869	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=CDS:HG002_chrY_T0001258:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14242870	14261319	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=intron:HG002_chrY_T0001258:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14261320	14261367	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=exon:HG002_chrY_T0001258:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14261320	14261367	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=CDS:HG002_chrY_T0001258:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14261368	14261536	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=intron:HG002_chrY_T0001258:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14261537	14261932	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=exon:HG002_chrY_T0001258:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14261537	14261932	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=CDS:HG002_chrY_T0001258:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14261933	14262456	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=intron:HG002_chrY_T0001258:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14262457	14262552	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=exon:HG002_chrY_T0001258:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14262457	14262552	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=CDS:HG002_chrY_T0001258:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14262553	14264410	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=intron:HG002_chrY_T0001258:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14264411	14264503	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=exon:HG002_chrY_T0001258:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14264411	14264503	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=CDS:HG002_chrY_T0001258:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14264504	14266300	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=intron:HG002_chrY_T0001258:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14266301	14266520	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=exon:HG002_chrY_T0001258:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14266301	14266520	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=CDS:HG002_chrY_T0001258:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14266521	14266963	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=intron:HG002_chrY_T0001258:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14266964	14267062	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=exon:HG002_chrY_T0001258:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14266964	14267062	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=CDS:HG002_chrY_T0001258:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14267063	14272800	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=intron:HG002_chrY_T0001258:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14272801	14272927	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=exon:HG002_chrY_T0001258:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14272801	14272927	.	-	2	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=CDS:HG002_chrY_T0001258:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14272928	14275789	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=intron:HG002_chrY_T0001258:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14275790	14275883	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=exon:HG002_chrY_T0001258:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14275790	14275883	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=CDS:HG002_chrY_T0001258:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14275884	14300394	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=intron:HG002_chrY_T0001258:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14300395	14300429	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=exon:HG002_chrY_T0001258:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14300395	14300429	.	-	2	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=CDS:HG002_chrY_T0001258:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14300430	14303453	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=intron:HG002_chrY_T0001258:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14303454	14303508	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=exon:HG002_chrY_T0001258:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14303454	14303508	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=CDS:HG002_chrY_T0001258:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14303509	14317527	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=intron:HG002_chrY_T0001258:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14317528	14317648	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=exon:HG002_chrY_T0001258:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14317528	14317648	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=CDS:HG002_chrY_T0001258:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14317649	14321269	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=intron:HG002_chrY_T0001258:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14321270	14321328	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=exon:HG002_chrY_T0001258:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14321270	14321328	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=CDS:HG002_chrY_T0001258:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14321329	14355535	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=intron:HG002_chrY_T0001258:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14355536	14355585	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=exon:HG002_chrY_T0001258:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14355536	14355585	.	-	2	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=CDS:HG002_chrY_T0001258:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14355586	14376639	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=intron:HG002_chrY_T0001258:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14376640	14376748	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=exon:HG002_chrY_T0001258:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14376640	14376748	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=CDS:HG002_chrY_T0001258:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14376749	14385772	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=intron:HG002_chrY_T0001258:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14385773	14385836	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=exon:HG002_chrY_T0001258:27;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14385773	14385836	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=CDS:HG002_chrY_T0001258:27;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14385837	14386032	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=intron:HG002_chrY_T0001258:27;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14386033	14386184	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=exon:HG002_chrY_T0001258:28;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14386033	14386184	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=CDS:HG002_chrY_T0001258:28;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	14386182	14386184	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG002_chrY_T0001258;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001258;transcript_name=HG002_chrY_T0001258;gene_name=UTY;ID=start_codon:HG002_chrY_T0001258;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	14156392	14386184	100	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_G0000413;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=HG002_chrY_T0001259;Name=UTY
HG002_chrY	CAT	exon	14156392	14156418	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=exon:HG002_chrY_T0001259:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14156392	14156418	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=CDS:HG002_chrY_T0001259:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	14156392	14156394	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=stop_codon:HG002_chrY_T0001259;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14156419	14157552	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=intron:HG002_chrY_T0001259:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14157553	14157723	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=exon:HG002_chrY_T0001259:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14157553	14157723	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=CDS:HG002_chrY_T0001259:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14157724	14166813	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=intron:HG002_chrY_T0001259:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14166814	14166940	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=exon:HG002_chrY_T0001259:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14166814	14166940	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=CDS:HG002_chrY_T0001259:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14166941	14204242	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=intron:HG002_chrY_T0001259:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14204243	14204384	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=exon:HG002_chrY_T0001259:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14204243	14204384	.	-	2	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=CDS:HG002_chrY_T0001259:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14204385	14205492	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=intron:HG002_chrY_T0001259:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14205493	14205680	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=exon:HG002_chrY_T0001259:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14205493	14205680	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=CDS:HG002_chrY_T0001259:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14205681	14209411	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=intron:HG002_chrY_T0001259:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14209412	14209526	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=exon:HG002_chrY_T0001259:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14209412	14209526	.	-	2	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=CDS:HG002_chrY_T0001259:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14209527	14211933	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=intron:HG002_chrY_T0001259:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14211934	14212082	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=exon:HG002_chrY_T0001259:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14211934	14212082	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=CDS:HG002_chrY_T0001259:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212083	14212572	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=intron:HG002_chrY_T0001259:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14212573	14212647	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=exon:HG002_chrY_T0001259:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14212573	14212647	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=CDS:HG002_chrY_T0001259:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212648	14212720	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=intron:HG002_chrY_T0001259:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14212721	14212785	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=exon:HG002_chrY_T0001259:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14212721	14212785	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=CDS:HG002_chrY_T0001259:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212786	14230088	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=intron:HG002_chrY_T0001259:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14230089	14230294	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=exon:HG002_chrY_T0001259:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14230089	14230294	.	-	2	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=CDS:HG002_chrY_T0001259:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14230295	14231134	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=intron:HG002_chrY_T0001259:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14231135	14231240	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=exon:HG002_chrY_T0001259:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14231135	14231240	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=CDS:HG002_chrY_T0001259:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14231241	14232754	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=intron:HG002_chrY_T0001259:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14232755	14232884	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=exon:HG002_chrY_T0001259:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14232755	14232884	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=CDS:HG002_chrY_T0001259:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14232885	14242096	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=intron:HG002_chrY_T0001259:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14242097	14242869	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=exon:HG002_chrY_T0001259:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14242097	14242869	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=CDS:HG002_chrY_T0001259:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14242870	14261536	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=intron:HG002_chrY_T0001259:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14261537	14261932	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=exon:HG002_chrY_T0001259:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14261537	14261932	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=CDS:HG002_chrY_T0001259:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14261933	14262456	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=intron:HG002_chrY_T0001259:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14262457	14262552	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=exon:HG002_chrY_T0001259:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14262457	14262552	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=CDS:HG002_chrY_T0001259:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14262553	14264410	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=intron:HG002_chrY_T0001259:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14264411	14264503	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=exon:HG002_chrY_T0001259:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14264411	14264503	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=CDS:HG002_chrY_T0001259:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14264504	14264997	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=intron:HG002_chrY_T0001259:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14264998	14265087	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=exon:HG002_chrY_T0001259:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14264998	14265087	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=CDS:HG002_chrY_T0001259:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14265088	14265621	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=intron:HG002_chrY_T0001259:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14265622	14265756	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=exon:HG002_chrY_T0001259:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14265622	14265756	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=CDS:HG002_chrY_T0001259:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14265757	14266300	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=intron:HG002_chrY_T0001259:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14266301	14266520	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=exon:HG002_chrY_T0001259:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14266301	14266520	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=CDS:HG002_chrY_T0001259:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14266521	14272800	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=intron:HG002_chrY_T0001259:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14272801	14272927	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=exon:HG002_chrY_T0001259:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14272801	14272927	.	-	2	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=CDS:HG002_chrY_T0001259:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14272928	14275789	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=intron:HG002_chrY_T0001259:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14275790	14275883	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=exon:HG002_chrY_T0001259:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14275790	14275883	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=CDS:HG002_chrY_T0001259:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14275884	14300394	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=intron:HG002_chrY_T0001259:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14300395	14300429	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=exon:HG002_chrY_T0001259:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14300395	14300429	.	-	2	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=CDS:HG002_chrY_T0001259:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14300430	14303453	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=intron:HG002_chrY_T0001259:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14303454	14303508	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=exon:HG002_chrY_T0001259:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14303454	14303508	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=CDS:HG002_chrY_T0001259:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14303509	14317527	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=intron:HG002_chrY_T0001259:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14317528	14317648	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=exon:HG002_chrY_T0001259:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14317528	14317648	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=CDS:HG002_chrY_T0001259:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14317649	14321269	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=intron:HG002_chrY_T0001259:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14321270	14321328	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=exon:HG002_chrY_T0001259:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14321270	14321328	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=CDS:HG002_chrY_T0001259:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14321329	14355535	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=intron:HG002_chrY_T0001259:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14355536	14355585	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=exon:HG002_chrY_T0001259:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14355536	14355585	.	-	2	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=CDS:HG002_chrY_T0001259:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14355586	14376639	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=intron:HG002_chrY_T0001259:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14376640	14376748	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=exon:HG002_chrY_T0001259:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14376640	14376748	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=CDS:HG002_chrY_T0001259:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14376749	14385772	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=intron:HG002_chrY_T0001259:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14385773	14385836	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=exon:HG002_chrY_T0001259:27;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14385773	14385836	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=CDS:HG002_chrY_T0001259:27;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14385837	14386032	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=intron:HG002_chrY_T0001259:27;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14386033	14386184	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=exon:HG002_chrY_T0001259:28;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14386033	14386184	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=CDS:HG002_chrY_T0001259:28;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	14386182	14386184	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG002_chrY_T0001259;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001259;transcript_name=HG002_chrY_T0001259;gene_name=UTY;ID=start_codon:HG002_chrY_T0001259;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	14156392	14386184	100	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_G0000413;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=HG002_chrY_T0001260;Name=UTY
HG002_chrY	CAT	exon	14156392	14156418	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=exon:HG002_chrY_T0001260:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14156392	14156418	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=CDS:HG002_chrY_T0001260:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	14156392	14156394	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=stop_codon:HG002_chrY_T0001260;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14156419	14157552	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=intron:HG002_chrY_T0001260:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14157553	14157723	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=exon:HG002_chrY_T0001260:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14157553	14157723	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=CDS:HG002_chrY_T0001260:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14157724	14166813	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=intron:HG002_chrY_T0001260:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14166814	14166940	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=exon:HG002_chrY_T0001260:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14166814	14166940	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=CDS:HG002_chrY_T0001260:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14166941	14204242	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=intron:HG002_chrY_T0001260:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14204243	14204384	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=exon:HG002_chrY_T0001260:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14204243	14204384	.	-	2	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=CDS:HG002_chrY_T0001260:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14204385	14205492	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=intron:HG002_chrY_T0001260:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14205493	14205680	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=exon:HG002_chrY_T0001260:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14205493	14205680	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=CDS:HG002_chrY_T0001260:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14205681	14209411	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=intron:HG002_chrY_T0001260:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14209412	14209526	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=exon:HG002_chrY_T0001260:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14209412	14209526	.	-	2	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=CDS:HG002_chrY_T0001260:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14209527	14211933	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=intron:HG002_chrY_T0001260:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14211934	14212082	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=exon:HG002_chrY_T0001260:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14211934	14212082	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=CDS:HG002_chrY_T0001260:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212083	14212720	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=intron:HG002_chrY_T0001260:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14212721	14212785	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=exon:HG002_chrY_T0001260:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14212721	14212785	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=CDS:HG002_chrY_T0001260:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212786	14230088	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=intron:HG002_chrY_T0001260:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14230089	14230294	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=exon:HG002_chrY_T0001260:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14230089	14230294	.	-	2	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=CDS:HG002_chrY_T0001260:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14230295	14231134	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=intron:HG002_chrY_T0001260:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14231135	14231240	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=exon:HG002_chrY_T0001260:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14231135	14231240	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=CDS:HG002_chrY_T0001260:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14231241	14232754	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=intron:HG002_chrY_T0001260:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14232755	14232884	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=exon:HG002_chrY_T0001260:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14232755	14232884	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=CDS:HG002_chrY_T0001260:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14232885	14242096	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=intron:HG002_chrY_T0001260:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14242097	14242869	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=exon:HG002_chrY_T0001260:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14242097	14242869	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=CDS:HG002_chrY_T0001260:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14242870	14261536	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=intron:HG002_chrY_T0001260:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14261537	14261932	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=exon:HG002_chrY_T0001260:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14261537	14261932	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=CDS:HG002_chrY_T0001260:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14261933	14262456	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=intron:HG002_chrY_T0001260:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14262457	14262552	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=exon:HG002_chrY_T0001260:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14262457	14262552	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=CDS:HG002_chrY_T0001260:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14262553	14264410	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=intron:HG002_chrY_T0001260:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14264411	14264503	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=exon:HG002_chrY_T0001260:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14264411	14264503	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=CDS:HG002_chrY_T0001260:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14264504	14265621	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=intron:HG002_chrY_T0001260:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14265622	14265756	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=exon:HG002_chrY_T0001260:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14265622	14265756	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=CDS:HG002_chrY_T0001260:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14265757	14266300	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=intron:HG002_chrY_T0001260:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14266301	14266520	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=exon:HG002_chrY_T0001260:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14266301	14266520	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=CDS:HG002_chrY_T0001260:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14266521	14266963	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=intron:HG002_chrY_T0001260:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14266964	14267062	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=exon:HG002_chrY_T0001260:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14266964	14267062	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=CDS:HG002_chrY_T0001260:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14267063	14272800	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=intron:HG002_chrY_T0001260:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14272801	14272927	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=exon:HG002_chrY_T0001260:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14272801	14272927	.	-	2	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=CDS:HG002_chrY_T0001260:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14272928	14275789	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=intron:HG002_chrY_T0001260:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14275790	14275883	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=exon:HG002_chrY_T0001260:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14275790	14275883	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=CDS:HG002_chrY_T0001260:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14275884	14300394	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=intron:HG002_chrY_T0001260:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14300395	14300429	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=exon:HG002_chrY_T0001260:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14300395	14300429	.	-	2	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=CDS:HG002_chrY_T0001260:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14300430	14303453	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=intron:HG002_chrY_T0001260:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14303454	14303508	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=exon:HG002_chrY_T0001260:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14303454	14303508	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=CDS:HG002_chrY_T0001260:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14303509	14317527	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=intron:HG002_chrY_T0001260:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14317528	14317648	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=exon:HG002_chrY_T0001260:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14317528	14317648	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=CDS:HG002_chrY_T0001260:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14317649	14321269	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=intron:HG002_chrY_T0001260:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14321270	14321328	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=exon:HG002_chrY_T0001260:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14321270	14321328	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=CDS:HG002_chrY_T0001260:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14321329	14355535	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=intron:HG002_chrY_T0001260:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14355536	14355585	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=exon:HG002_chrY_T0001260:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14355536	14355585	.	-	2	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=CDS:HG002_chrY_T0001260:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14355586	14376639	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=intron:HG002_chrY_T0001260:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14376640	14376748	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=exon:HG002_chrY_T0001260:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14376640	14376748	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=CDS:HG002_chrY_T0001260:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14376749	14385772	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=intron:HG002_chrY_T0001260:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14385773	14385836	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=exon:HG002_chrY_T0001260:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14385773	14385836	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=CDS:HG002_chrY_T0001260:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14385837	14386032	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=intron:HG002_chrY_T0001260:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14386033	14386184	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=exon:HG002_chrY_T0001260:27;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14386033	14386184	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=CDS:HG002_chrY_T0001260:27;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	14386182	14386184	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG002_chrY_T0001260;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001260;transcript_name=HG002_chrY_T0001260;gene_name=UTY;ID=start_codon:HG002_chrY_T0001260;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	14156392	14386184	100	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_G0000413;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=HG002_chrY_T0001261;Name=UTY
HG002_chrY	CAT	exon	14156392	14156418	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=exon:HG002_chrY_T0001261:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14156392	14156418	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=CDS:HG002_chrY_T0001261:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	14156392	14156394	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=stop_codon:HG002_chrY_T0001261;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14156419	14157552	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=intron:HG002_chrY_T0001261:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14157553	14157723	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=exon:HG002_chrY_T0001261:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14157553	14157723	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=CDS:HG002_chrY_T0001261:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14157724	14166813	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=intron:HG002_chrY_T0001261:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14166814	14166940	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=exon:HG002_chrY_T0001261:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14166814	14166940	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=CDS:HG002_chrY_T0001261:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14166941	14204242	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=intron:HG002_chrY_T0001261:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14204243	14204384	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=exon:HG002_chrY_T0001261:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14204243	14204384	.	-	2	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=CDS:HG002_chrY_T0001261:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14204385	14205492	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=intron:HG002_chrY_T0001261:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14205493	14205680	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=exon:HG002_chrY_T0001261:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14205493	14205680	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=CDS:HG002_chrY_T0001261:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14205681	14209411	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=intron:HG002_chrY_T0001261:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14209412	14209526	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=exon:HG002_chrY_T0001261:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14209412	14209526	.	-	2	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=CDS:HG002_chrY_T0001261:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14209527	14211933	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=intron:HG002_chrY_T0001261:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14211934	14212082	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=exon:HG002_chrY_T0001261:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14211934	14212082	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=CDS:HG002_chrY_T0001261:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212083	14212572	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=intron:HG002_chrY_T0001261:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14212573	14212647	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=exon:HG002_chrY_T0001261:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14212573	14212647	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=CDS:HG002_chrY_T0001261:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212648	14212720	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=intron:HG002_chrY_T0001261:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14212721	14212785	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=exon:HG002_chrY_T0001261:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14212721	14212785	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=CDS:HG002_chrY_T0001261:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212786	14230088	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=intron:HG002_chrY_T0001261:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14230089	14230294	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=exon:HG002_chrY_T0001261:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14230089	14230294	.	-	2	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=CDS:HG002_chrY_T0001261:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14230295	14231134	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=intron:HG002_chrY_T0001261:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14231135	14231240	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=exon:HG002_chrY_T0001261:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14231135	14231240	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=CDS:HG002_chrY_T0001261:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14231241	14232754	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=intron:HG002_chrY_T0001261:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14232755	14232884	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=exon:HG002_chrY_T0001261:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14232755	14232884	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=CDS:HG002_chrY_T0001261:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14232885	14242096	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=intron:HG002_chrY_T0001261:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14242097	14242869	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=exon:HG002_chrY_T0001261:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14242097	14242869	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=CDS:HG002_chrY_T0001261:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14242870	14261536	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=intron:HG002_chrY_T0001261:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14261537	14261932	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=exon:HG002_chrY_T0001261:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14261537	14261932	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=CDS:HG002_chrY_T0001261:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14261933	14262456	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=intron:HG002_chrY_T0001261:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14262457	14262552	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=exon:HG002_chrY_T0001261:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14262457	14262552	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=CDS:HG002_chrY_T0001261:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14262553	14264410	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=intron:HG002_chrY_T0001261:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14264411	14264503	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=exon:HG002_chrY_T0001261:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14264411	14264503	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=CDS:HG002_chrY_T0001261:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14264504	14264997	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=intron:HG002_chrY_T0001261:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14264998	14265153	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=exon:HG002_chrY_T0001261:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14264998	14265153	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=CDS:HG002_chrY_T0001261:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14265154	14266300	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=intron:HG002_chrY_T0001261:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14266301	14266520	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=exon:HG002_chrY_T0001261:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14266301	14266520	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=CDS:HG002_chrY_T0001261:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14266521	14266963	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=intron:HG002_chrY_T0001261:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14266964	14267062	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=exon:HG002_chrY_T0001261:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14266964	14267062	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=CDS:HG002_chrY_T0001261:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14267063	14272800	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=intron:HG002_chrY_T0001261:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14272801	14272927	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=exon:HG002_chrY_T0001261:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14272801	14272927	.	-	2	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=CDS:HG002_chrY_T0001261:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14272928	14275789	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=intron:HG002_chrY_T0001261:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14275790	14275883	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=exon:HG002_chrY_T0001261:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14275790	14275883	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=CDS:HG002_chrY_T0001261:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14275884	14300394	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=intron:HG002_chrY_T0001261:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14300395	14300429	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=exon:HG002_chrY_T0001261:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14300395	14300429	.	-	2	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=CDS:HG002_chrY_T0001261:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14300430	14303453	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=intron:HG002_chrY_T0001261:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14303454	14303508	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=exon:HG002_chrY_T0001261:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14303454	14303508	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=CDS:HG002_chrY_T0001261:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14303509	14317527	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=intron:HG002_chrY_T0001261:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14317528	14317648	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=exon:HG002_chrY_T0001261:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14317528	14317648	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=CDS:HG002_chrY_T0001261:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14317649	14321269	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=intron:HG002_chrY_T0001261:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14321270	14321328	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=exon:HG002_chrY_T0001261:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14321270	14321328	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=CDS:HG002_chrY_T0001261:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14321329	14355535	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=intron:HG002_chrY_T0001261:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14355536	14355585	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=exon:HG002_chrY_T0001261:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14355536	14355585	.	-	2	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=CDS:HG002_chrY_T0001261:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14355586	14376639	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=intron:HG002_chrY_T0001261:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14376640	14376748	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=exon:HG002_chrY_T0001261:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14376640	14376748	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=CDS:HG002_chrY_T0001261:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14376749	14385772	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=intron:HG002_chrY_T0001261:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14385773	14385836	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=exon:HG002_chrY_T0001261:27;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14385773	14385836	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=CDS:HG002_chrY_T0001261:27;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14385837	14386032	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=intron:HG002_chrY_T0001261:27;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14386033	14386184	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=exon:HG002_chrY_T0001261:28;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14386033	14386184	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=CDS:HG002_chrY_T0001261:28;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	14386182	14386184	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG002_chrY_T0001261;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001261;transcript_name=HG002_chrY_T0001261;gene_name=UTY;ID=start_codon:HG002_chrY_T0001261;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	14156392	14386184	100	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_G0000413;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=HG002_chrY_T0001262;Name=UTY
HG002_chrY	CAT	exon	14156392	14156418	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=exon:HG002_chrY_T0001262:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14156392	14156418	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=CDS:HG002_chrY_T0001262:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	14156392	14156394	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=stop_codon:HG002_chrY_T0001262;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14156419	14157552	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=intron:HG002_chrY_T0001262:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14157553	14157723	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=exon:HG002_chrY_T0001262:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14157553	14157723	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=CDS:HG002_chrY_T0001262:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14157724	14166813	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=intron:HG002_chrY_T0001262:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14166814	14166940	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=exon:HG002_chrY_T0001262:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14166814	14166940	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=CDS:HG002_chrY_T0001262:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14166941	14204242	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=intron:HG002_chrY_T0001262:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14204243	14204384	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=exon:HG002_chrY_T0001262:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14204243	14204384	.	-	2	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=CDS:HG002_chrY_T0001262:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14204385	14205492	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=intron:HG002_chrY_T0001262:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14205493	14205680	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=exon:HG002_chrY_T0001262:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14205493	14205680	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=CDS:HG002_chrY_T0001262:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14205681	14209411	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=intron:HG002_chrY_T0001262:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14209412	14209526	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=exon:HG002_chrY_T0001262:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14209412	14209526	.	-	2	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=CDS:HG002_chrY_T0001262:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14209527	14211933	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=intron:HG002_chrY_T0001262:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14211934	14212082	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=exon:HG002_chrY_T0001262:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14211934	14212082	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=CDS:HG002_chrY_T0001262:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212083	14212572	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=intron:HG002_chrY_T0001262:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14212573	14212647	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=exon:HG002_chrY_T0001262:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14212573	14212647	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=CDS:HG002_chrY_T0001262:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212648	14212720	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=intron:HG002_chrY_T0001262:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14212721	14212785	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=exon:HG002_chrY_T0001262:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14212721	14212785	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=CDS:HG002_chrY_T0001262:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212786	14230088	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=intron:HG002_chrY_T0001262:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14230089	14230294	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=exon:HG002_chrY_T0001262:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14230089	14230294	.	-	2	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=CDS:HG002_chrY_T0001262:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14230295	14231134	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=intron:HG002_chrY_T0001262:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14231135	14231240	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=exon:HG002_chrY_T0001262:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14231135	14231240	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=CDS:HG002_chrY_T0001262:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14231241	14232754	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=intron:HG002_chrY_T0001262:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14232755	14232884	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=exon:HG002_chrY_T0001262:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14232755	14232884	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=CDS:HG002_chrY_T0001262:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14232885	14242096	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=intron:HG002_chrY_T0001262:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14242097	14242869	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=exon:HG002_chrY_T0001262:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14242097	14242869	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=CDS:HG002_chrY_T0001262:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14242870	14261536	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=intron:HG002_chrY_T0001262:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14261537	14261932	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=exon:HG002_chrY_T0001262:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14261537	14261932	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=CDS:HG002_chrY_T0001262:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14261933	14262456	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=intron:HG002_chrY_T0001262:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14262457	14262552	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=exon:HG002_chrY_T0001262:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14262457	14262552	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=CDS:HG002_chrY_T0001262:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14262553	14264410	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=intron:HG002_chrY_T0001262:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14264411	14264503	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=exon:HG002_chrY_T0001262:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14264411	14264503	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=CDS:HG002_chrY_T0001262:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14264504	14266300	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=intron:HG002_chrY_T0001262:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14266301	14266520	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=exon:HG002_chrY_T0001262:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14266301	14266520	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=CDS:HG002_chrY_T0001262:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14266521	14266963	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=intron:HG002_chrY_T0001262:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14266964	14267062	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=exon:HG002_chrY_T0001262:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14266964	14267062	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=CDS:HG002_chrY_T0001262:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14267063	14272800	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=intron:HG002_chrY_T0001262:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14272801	14272927	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=exon:HG002_chrY_T0001262:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14272801	14272927	.	-	2	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=CDS:HG002_chrY_T0001262:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14272928	14275789	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=intron:HG002_chrY_T0001262:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14275790	14275883	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=exon:HG002_chrY_T0001262:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14275790	14275883	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=CDS:HG002_chrY_T0001262:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14275884	14317527	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=intron:HG002_chrY_T0001262:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14317528	14317648	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=exon:HG002_chrY_T0001262:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14317528	14317648	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=CDS:HG002_chrY_T0001262:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14317649	14321269	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=intron:HG002_chrY_T0001262:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14321270	14321328	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=exon:HG002_chrY_T0001262:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14321270	14321328	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=CDS:HG002_chrY_T0001262:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14321329	14385772	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=intron:HG002_chrY_T0001262:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14385773	14385836	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=exon:HG002_chrY_T0001262:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14385773	14385836	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=CDS:HG002_chrY_T0001262:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14385837	14386032	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=intron:HG002_chrY_T0001262:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14386033	14386184	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=exon:HG002_chrY_T0001262:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14386033	14386184	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=CDS:HG002_chrY_T0001262:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	14386182	14386184	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG002_chrY_T0001262;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001262;transcript_name=HG002_chrY_T0001262;gene_name=UTY;ID=start_codon:HG002_chrY_T0001262;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	14156392	14386184	100	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_G0000413;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=HG002_chrY_T0001263;Name=UTY
HG002_chrY	CAT	exon	14156392	14156418	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=exon:HG002_chrY_T0001263:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14156392	14156418	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=CDS:HG002_chrY_T0001263:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	14156392	14156394	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=stop_codon:HG002_chrY_T0001263;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14156419	14166813	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=intron:HG002_chrY_T0001263:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14166814	14166940	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=exon:HG002_chrY_T0001263:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14166814	14166940	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=CDS:HG002_chrY_T0001263:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14166941	14204242	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=intron:HG002_chrY_T0001263:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14204243	14204384	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=exon:HG002_chrY_T0001263:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14204243	14204384	.	-	2	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=CDS:HG002_chrY_T0001263:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14204385	14205492	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=intron:HG002_chrY_T0001263:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14205493	14205680	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=exon:HG002_chrY_T0001263:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14205493	14205680	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=CDS:HG002_chrY_T0001263:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14205681	14209411	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=intron:HG002_chrY_T0001263:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14209412	14209526	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=exon:HG002_chrY_T0001263:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14209412	14209526	.	-	2	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=CDS:HG002_chrY_T0001263:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14209527	14211933	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=intron:HG002_chrY_T0001263:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14211934	14212082	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=exon:HG002_chrY_T0001263:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14211934	14212082	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=CDS:HG002_chrY_T0001263:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212083	14212572	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=intron:HG002_chrY_T0001263:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14212573	14212647	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=exon:HG002_chrY_T0001263:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14212573	14212647	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=CDS:HG002_chrY_T0001263:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212648	14212720	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=intron:HG002_chrY_T0001263:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14212721	14212785	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=exon:HG002_chrY_T0001263:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14212721	14212785	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=CDS:HG002_chrY_T0001263:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212786	14230088	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=intron:HG002_chrY_T0001263:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14230089	14230294	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=exon:HG002_chrY_T0001263:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14230089	14230294	.	-	2	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=CDS:HG002_chrY_T0001263:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14230295	14231134	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=intron:HG002_chrY_T0001263:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14231135	14231240	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=exon:HG002_chrY_T0001263:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14231135	14231240	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=CDS:HG002_chrY_T0001263:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14231241	14232754	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=intron:HG002_chrY_T0001263:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14232755	14232884	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=exon:HG002_chrY_T0001263:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14232755	14232884	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=CDS:HG002_chrY_T0001263:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14232885	14242096	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=intron:HG002_chrY_T0001263:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14242097	14242869	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=exon:HG002_chrY_T0001263:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14242097	14242869	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=CDS:HG002_chrY_T0001263:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14242870	14261908	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=intron:HG002_chrY_T0001263:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14261909	14261932	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=exon:HG002_chrY_T0001263:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14261909	14261932	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=CDS:HG002_chrY_T0001263:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14261933	14262456	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=intron:HG002_chrY_T0001263:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14262457	14262552	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=exon:HG002_chrY_T0001263:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14262457	14262552	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=CDS:HG002_chrY_T0001263:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14262553	14264410	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=intron:HG002_chrY_T0001263:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14264411	14264503	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=exon:HG002_chrY_T0001263:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14264411	14264503	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=CDS:HG002_chrY_T0001263:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14264504	14265621	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=intron:HG002_chrY_T0001263:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14265622	14265756	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=exon:HG002_chrY_T0001263:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14265622	14265756	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=CDS:HG002_chrY_T0001263:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14265757	14266300	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=intron:HG002_chrY_T0001263:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14266301	14266520	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=exon:HG002_chrY_T0001263:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14266301	14266520	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=CDS:HG002_chrY_T0001263:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14266521	14266963	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=intron:HG002_chrY_T0001263:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14266964	14267062	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=exon:HG002_chrY_T0001263:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14266964	14267062	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=CDS:HG002_chrY_T0001263:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14267063	14272800	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=intron:HG002_chrY_T0001263:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14272801	14272927	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=exon:HG002_chrY_T0001263:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14272801	14272927	.	-	2	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=CDS:HG002_chrY_T0001263:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14272928	14275789	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=intron:HG002_chrY_T0001263:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14275790	14275883	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=exon:HG002_chrY_T0001263:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14275790	14275883	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=CDS:HG002_chrY_T0001263:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14275884	14300394	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=intron:HG002_chrY_T0001263:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14300395	14300429	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=exon:HG002_chrY_T0001263:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14300395	14300429	.	-	2	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=CDS:HG002_chrY_T0001263:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14300430	14303453	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=intron:HG002_chrY_T0001263:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14303454	14303508	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=exon:HG002_chrY_T0001263:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14303454	14303508	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=CDS:HG002_chrY_T0001263:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14303509	14317527	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=intron:HG002_chrY_T0001263:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14317528	14317648	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=exon:HG002_chrY_T0001263:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14317528	14317648	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=CDS:HG002_chrY_T0001263:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14317649	14321269	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=intron:HG002_chrY_T0001263:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14321270	14321328	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=exon:HG002_chrY_T0001263:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14321270	14321328	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=CDS:HG002_chrY_T0001263:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14321329	14355535	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=intron:HG002_chrY_T0001263:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14355536	14355585	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=exon:HG002_chrY_T0001263:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14355536	14355585	.	-	2	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=CDS:HG002_chrY_T0001263:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14355586	14376639	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=intron:HG002_chrY_T0001263:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14376640	14376748	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=exon:HG002_chrY_T0001263:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14376640	14376748	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=CDS:HG002_chrY_T0001263:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14376749	14385772	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=intron:HG002_chrY_T0001263:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14385773	14385836	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=exon:HG002_chrY_T0001263:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14385773	14385836	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=CDS:HG002_chrY_T0001263:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14385837	14386032	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=intron:HG002_chrY_T0001263:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14386033	14386184	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=exon:HG002_chrY_T0001263:27;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14386033	14386184	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=CDS:HG002_chrY_T0001263:27;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	14386182	14386184	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG002_chrY_T0001263;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001263;transcript_name=HG002_chrY_T0001263;gene_name=UTY;ID=start_codon:HG002_chrY_T0001263;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	14156392	14386184	100	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_G0000413;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=HG002_chrY_T0001264;Name=UTY
HG002_chrY	CAT	exon	14156392	14156418	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=exon:HG002_chrY_T0001264:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14156392	14156418	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=CDS:HG002_chrY_T0001264:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	14156392	14156394	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=stop_codon:HG002_chrY_T0001264;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14156419	14157552	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=intron:HG002_chrY_T0001264:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14157553	14157723	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=exon:HG002_chrY_T0001264:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14157553	14157723	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=CDS:HG002_chrY_T0001264:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14157724	14166813	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=intron:HG002_chrY_T0001264:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14166814	14166940	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=exon:HG002_chrY_T0001264:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14166814	14166940	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=CDS:HG002_chrY_T0001264:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14166941	14204242	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=intron:HG002_chrY_T0001264:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14204243	14204384	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=exon:HG002_chrY_T0001264:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14204243	14204384	.	-	2	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=CDS:HG002_chrY_T0001264:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14204385	14205492	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=intron:HG002_chrY_T0001264:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14205493	14205680	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=exon:HG002_chrY_T0001264:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14205493	14205680	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=CDS:HG002_chrY_T0001264:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14205681	14209411	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=intron:HG002_chrY_T0001264:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14209412	14209526	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=exon:HG002_chrY_T0001264:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14209412	14209526	.	-	2	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=CDS:HG002_chrY_T0001264:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14209527	14211933	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=intron:HG002_chrY_T0001264:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14211934	14212082	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=exon:HG002_chrY_T0001264:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14211934	14212082	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=CDS:HG002_chrY_T0001264:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212083	14212572	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=intron:HG002_chrY_T0001264:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14212573	14212647	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=exon:HG002_chrY_T0001264:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14212573	14212647	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=CDS:HG002_chrY_T0001264:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212648	14212720	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=intron:HG002_chrY_T0001264:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14212721	14212785	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=exon:HG002_chrY_T0001264:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14212721	14212785	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=CDS:HG002_chrY_T0001264:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212786	14230088	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=intron:HG002_chrY_T0001264:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14230089	14230294	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=exon:HG002_chrY_T0001264:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14230089	14230294	.	-	2	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=CDS:HG002_chrY_T0001264:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14230295	14231134	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=intron:HG002_chrY_T0001264:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14231135	14231240	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=exon:HG002_chrY_T0001264:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14231135	14231240	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=CDS:HG002_chrY_T0001264:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14231241	14232754	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=intron:HG002_chrY_T0001264:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14232755	14232884	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=exon:HG002_chrY_T0001264:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14232755	14232884	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=CDS:HG002_chrY_T0001264:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14232885	14242096	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=intron:HG002_chrY_T0001264:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14242097	14242869	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=exon:HG002_chrY_T0001264:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14242097	14242869	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=CDS:HG002_chrY_T0001264:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14242870	14261536	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=intron:HG002_chrY_T0001264:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14261537	14261932	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=exon:HG002_chrY_T0001264:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14261537	14261932	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=CDS:HG002_chrY_T0001264:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14261933	14262456	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=intron:HG002_chrY_T0001264:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14262457	14262552	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=exon:HG002_chrY_T0001264:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14262457	14262552	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=CDS:HG002_chrY_T0001264:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14262553	14264410	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=intron:HG002_chrY_T0001264:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14264411	14264503	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=exon:HG002_chrY_T0001264:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14264411	14264503	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=CDS:HG002_chrY_T0001264:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14264504	14265621	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=intron:HG002_chrY_T0001264:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14265622	14265756	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=exon:HG002_chrY_T0001264:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14265622	14265756	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=CDS:HG002_chrY_T0001264:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14265757	14266300	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=intron:HG002_chrY_T0001264:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14266301	14266520	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=exon:HG002_chrY_T0001264:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14266301	14266520	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=CDS:HG002_chrY_T0001264:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14266521	14266963	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=intron:HG002_chrY_T0001264:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14266964	14267062	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=exon:HG002_chrY_T0001264:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14266964	14267062	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=CDS:HG002_chrY_T0001264:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14267063	14272800	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=intron:HG002_chrY_T0001264:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14272801	14272927	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=exon:HG002_chrY_T0001264:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14272801	14272927	.	-	2	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=CDS:HG002_chrY_T0001264:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14272928	14275789	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=intron:HG002_chrY_T0001264:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14275790	14275883	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=exon:HG002_chrY_T0001264:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14275790	14275883	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=CDS:HG002_chrY_T0001264:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14275884	14300394	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=intron:HG002_chrY_T0001264:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14300395	14300429	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=exon:HG002_chrY_T0001264:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14300395	14300429	.	-	2	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=CDS:HG002_chrY_T0001264:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14300430	14303453	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=intron:HG002_chrY_T0001264:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14303454	14303508	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=exon:HG002_chrY_T0001264:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14303454	14303508	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=CDS:HG002_chrY_T0001264:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14303509	14317527	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=intron:HG002_chrY_T0001264:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14317528	14317648	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=exon:HG002_chrY_T0001264:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14317528	14317648	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=CDS:HG002_chrY_T0001264:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14317649	14321269	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=intron:HG002_chrY_T0001264:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14321270	14321328	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=exon:HG002_chrY_T0001264:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14321270	14321328	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=CDS:HG002_chrY_T0001264:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14321329	14355535	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=intron:HG002_chrY_T0001264:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14355536	14355585	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=exon:HG002_chrY_T0001264:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14355536	14355585	.	-	2	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=CDS:HG002_chrY_T0001264:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14355586	14376639	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=intron:HG002_chrY_T0001264:25;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14376640	14376748	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=exon:HG002_chrY_T0001264:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14376640	14376748	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=CDS:HG002_chrY_T0001264:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14376749	14385772	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=intron:HG002_chrY_T0001264:26;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14385773	14385836	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=exon:HG002_chrY_T0001264:27;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14385773	14385836	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=CDS:HG002_chrY_T0001264:27;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14385837	14386032	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=intron:HG002_chrY_T0001264:27;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14386033	14386184	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=exon:HG002_chrY_T0001264:28;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14386033	14386184	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=CDS:HG002_chrY_T0001264:28;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	14386182	14386184	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG002_chrY_T0001264;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001264;transcript_name=HG002_chrY_T0001264;gene_name=UTY;ID=start_codon:HG002_chrY_T0001264;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	14203977	14387189	100	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_G0000413;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=HG002_chrY_T0001266;Name=UTY
HG002_chrY	CAT	exon	14203977	14204384	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=exon:HG002_chrY_T0001266:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14204239	14204384	.	-	2	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=CDS:HG002_chrY_T0001266:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	14204239	14204241	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=stop_codon:HG002_chrY_T0001266;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14204385	14205492	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=intron:HG002_chrY_T0001266:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14205493	14205680	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=exon:HG002_chrY_T0001266:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14205493	14205680	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=CDS:HG002_chrY_T0001266:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14205681	14209411	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=intron:HG002_chrY_T0001266:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14209412	14209526	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=exon:HG002_chrY_T0001266:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14209412	14209526	.	-	2	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=CDS:HG002_chrY_T0001266:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14209527	14211933	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=intron:HG002_chrY_T0001266:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14211934	14212082	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=exon:HG002_chrY_T0001266:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14211934	14212082	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=CDS:HG002_chrY_T0001266:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212083	14212572	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=intron:HG002_chrY_T0001266:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14212573	14212647	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=exon:HG002_chrY_T0001266:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14212573	14212647	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=CDS:HG002_chrY_T0001266:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212648	14212720	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=intron:HG002_chrY_T0001266:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14212721	14212785	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=exon:HG002_chrY_T0001266:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14212721	14212785	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=CDS:HG002_chrY_T0001266:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14212786	14230088	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=intron:HG002_chrY_T0001266:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14230089	14230294	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=exon:HG002_chrY_T0001266:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14230089	14230294	.	-	2	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=CDS:HG002_chrY_T0001266:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14230295	14231134	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=intron:HG002_chrY_T0001266:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14231135	14231240	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=exon:HG002_chrY_T0001266:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14231135	14231240	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=CDS:HG002_chrY_T0001266:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14231241	14232754	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=intron:HG002_chrY_T0001266:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14232755	14232884	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=exon:HG002_chrY_T0001266:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14232755	14232884	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=CDS:HG002_chrY_T0001266:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14232885	14242096	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=intron:HG002_chrY_T0001266:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14242097	14242869	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=exon:HG002_chrY_T0001266:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14242097	14242869	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=CDS:HG002_chrY_T0001266:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14242870	14261536	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=intron:HG002_chrY_T0001266:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14261537	14261932	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=exon:HG002_chrY_T0001266:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14261537	14261932	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=CDS:HG002_chrY_T0001266:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14261933	14262456	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=intron:HG002_chrY_T0001266:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14262457	14262552	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=exon:HG002_chrY_T0001266:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14262457	14262552	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=CDS:HG002_chrY_T0001266:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14262553	14264410	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=intron:HG002_chrY_T0001266:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14264411	14264503	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=exon:HG002_chrY_T0001266:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14264411	14264503	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=CDS:HG002_chrY_T0001266:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14264504	14266300	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=intron:HG002_chrY_T0001266:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14266301	14266520	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=exon:HG002_chrY_T0001266:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14266301	14266520	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=CDS:HG002_chrY_T0001266:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14266521	14266963	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=intron:HG002_chrY_T0001266:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14266964	14267062	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=exon:HG002_chrY_T0001266:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14266964	14267062	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=CDS:HG002_chrY_T0001266:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14267063	14272800	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=intron:HG002_chrY_T0001266:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14272801	14272927	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=exon:HG002_chrY_T0001266:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14272801	14272927	.	-	2	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=CDS:HG002_chrY_T0001266:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14272928	14275789	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=intron:HG002_chrY_T0001266:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14275790	14275883	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=exon:HG002_chrY_T0001266:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14275790	14275883	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=CDS:HG002_chrY_T0001266:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14275884	14300394	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=intron:HG002_chrY_T0001266:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14300395	14300429	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=exon:HG002_chrY_T0001266:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14300395	14300429	.	-	2	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=CDS:HG002_chrY_T0001266:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14300430	14303453	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=intron:HG002_chrY_T0001266:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14303454	14303508	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=exon:HG002_chrY_T0001266:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14303454	14303508	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=CDS:HG002_chrY_T0001266:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14303509	14317527	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=intron:HG002_chrY_T0001266:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14317528	14317648	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=exon:HG002_chrY_T0001266:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14317528	14317648	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=CDS:HG002_chrY_T0001266:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14317649	14321269	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=intron:HG002_chrY_T0001266:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14321270	14321328	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=exon:HG002_chrY_T0001266:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14321270	14321328	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=CDS:HG002_chrY_T0001266:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14321329	14355535	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=intron:HG002_chrY_T0001266:20;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14355536	14355585	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=exon:HG002_chrY_T0001266:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14355536	14355585	.	-	2	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=CDS:HG002_chrY_T0001266:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14355586	14376639	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=intron:HG002_chrY_T0001266:21;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14376640	14376748	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=exon:HG002_chrY_T0001266:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14376640	14376748	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=CDS:HG002_chrY_T0001266:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14376749	14385772	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=intron:HG002_chrY_T0001266:22;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14385773	14385836	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=exon:HG002_chrY_T0001266:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14385773	14385836	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=CDS:HG002_chrY_T0001266:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14385837	14386032	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=intron:HG002_chrY_T0001266:23;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14386033	14387189	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=exon:HG002_chrY_T0001266:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14386033	14386184	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=CDS:HG002_chrY_T0001266:24;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	14386182	14386184	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG002_chrY_T0001266;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001266;transcript_name=HG002_chrY_T0001266;gene_name=UTY;ID=start_codon:HG002_chrY_T0001266;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	14229568	14387189	100	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_G0000413;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=HG002_chrY_T0001267;Name=UTY
HG002_chrY	CAT	exon	14229568	14229902	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=exon:HG002_chrY_T0001267:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14229648	14229902	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=CDS:HG002_chrY_T0001267:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	14229648	14229650	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=stop_codon:HG002_chrY_T0001267;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14229903	14230088	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=intron:HG002_chrY_T0001267:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14230089	14230294	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=exon:HG002_chrY_T0001267:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14230089	14230294	.	-	2	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=CDS:HG002_chrY_T0001267:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14230295	14231134	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=intron:HG002_chrY_T0001267:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14231135	14231240	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=exon:HG002_chrY_T0001267:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14231135	14231240	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=CDS:HG002_chrY_T0001267:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14231241	14232754	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=intron:HG002_chrY_T0001267:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14232755	14232884	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=exon:HG002_chrY_T0001267:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14232755	14232884	.	-	1	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=CDS:HG002_chrY_T0001267:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14232885	14242096	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=intron:HG002_chrY_T0001267:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14242097	14242869	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=exon:HG002_chrY_T0001267:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14242097	14242869	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=CDS:HG002_chrY_T0001267:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14242870	14261536	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=intron:HG002_chrY_T0001267:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14261537	14261932	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=exon:HG002_chrY_T0001267:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14261537	14261932	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=CDS:HG002_chrY_T0001267:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14261933	14262456	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=intron:HG002_chrY_T0001267:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14262457	14262552	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=exon:HG002_chrY_T0001267:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14262457	14262552	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=CDS:HG002_chrY_T0001267:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14262553	14264410	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=intron:HG002_chrY_T0001267:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14264411	14264503	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=exon:HG002_chrY_T0001267:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14264411	14264503	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=CDS:HG002_chrY_T0001267:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14264504	14266300	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=intron:HG002_chrY_T0001267:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14266301	14266520	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=exon:HG002_chrY_T0001267:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14266301	14266520	.	-	1	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=CDS:HG002_chrY_T0001267:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14266521	14266963	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=intron:HG002_chrY_T0001267:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14266964	14267062	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=exon:HG002_chrY_T0001267:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14266964	14267062	.	-	1	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=CDS:HG002_chrY_T0001267:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14267063	14272800	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=intron:HG002_chrY_T0001267:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14272801	14272927	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=exon:HG002_chrY_T0001267:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14272801	14272927	.	-	2	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=CDS:HG002_chrY_T0001267:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14272928	14275789	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=intron:HG002_chrY_T0001267:10;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14275790	14275883	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=exon:HG002_chrY_T0001267:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14275790	14275883	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=CDS:HG002_chrY_T0001267:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14275884	14300394	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=intron:HG002_chrY_T0001267:11;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14300395	14300429	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=exon:HG002_chrY_T0001267:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14300395	14300429	.	-	2	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=CDS:HG002_chrY_T0001267:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14300430	14303453	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=intron:HG002_chrY_T0001267:12;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14303454	14303508	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=exon:HG002_chrY_T0001267:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14303454	14303508	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=CDS:HG002_chrY_T0001267:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14303509	14317527	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=intron:HG002_chrY_T0001267:13;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14317528	14317648	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=exon:HG002_chrY_T0001267:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14317528	14317648	.	-	1	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=CDS:HG002_chrY_T0001267:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14317649	14321269	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=intron:HG002_chrY_T0001267:14;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14321270	14321328	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=exon:HG002_chrY_T0001267:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14321270	14321328	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=CDS:HG002_chrY_T0001267:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14321329	14355535	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=intron:HG002_chrY_T0001267:15;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14355536	14355585	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=exon:HG002_chrY_T0001267:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14355536	14355585	.	-	2	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=CDS:HG002_chrY_T0001267:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14355586	14376639	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=intron:HG002_chrY_T0001267:16;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14376640	14376748	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=exon:HG002_chrY_T0001267:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14376640	14376748	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=CDS:HG002_chrY_T0001267:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14376749	14385772	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=intron:HG002_chrY_T0001267:17;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14385773	14385836	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=exon:HG002_chrY_T0001267:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14385773	14385836	.	-	1	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=CDS:HG002_chrY_T0001267:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14385837	14386032	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=intron:HG002_chrY_T0001267:18;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14386033	14387189	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=exon:HG002_chrY_T0001267:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14386033	14386184	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=CDS:HG002_chrY_T0001267:19;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	14386182	14386184	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG002_chrY_T0001267;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001267;transcript_name=HG002_chrY_T0001267;gene_name=UTY;ID=start_codon:HG002_chrY_T0001267;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	14267022	14386059	1000	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG002_chrY_T0001268;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_G0000413;transcript_name=HG002_chrY_T0001268;gene_name=UTY;ID=HG002_chrY_T0001268;Name=UTY
HG002_chrY	CAT	exon	14267022	14267062	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG002_chrY_T0001268;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001268;transcript_name=HG002_chrY_T0001268;gene_name=UTY;ID=exon:HG002_chrY_T0001268:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14267063	14272800	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG002_chrY_T0001268;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001268;transcript_name=HG002_chrY_T0001268;gene_name=UTY;ID=intron:HG002_chrY_T0001268:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14272801	14272927	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG002_chrY_T0001268;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001268;transcript_name=HG002_chrY_T0001268;gene_name=UTY;ID=exon:HG002_chrY_T0001268:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14272928	14275789	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG002_chrY_T0001268;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001268;transcript_name=HG002_chrY_T0001268;gene_name=UTY;ID=intron:HG002_chrY_T0001268:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14275790	14275883	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG002_chrY_T0001268;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001268;transcript_name=HG002_chrY_T0001268;gene_name=UTY;ID=exon:HG002_chrY_T0001268:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14275852	14275883	.	-	2	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG002_chrY_T0001268;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001268;transcript_name=HG002_chrY_T0001268;gene_name=UTY;ID=CDS:HG002_chrY_T0001268:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	14275852	14275854	.	-	0	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG002_chrY_T0001268;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001268;transcript_name=HG002_chrY_T0001268;gene_name=UTY;ID=stop_codon:HG002_chrY_T0001268;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14275884	14303453	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG002_chrY_T0001268;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001268;transcript_name=HG002_chrY_T0001268;gene_name=UTY;ID=intron:HG002_chrY_T0001268:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14303454	14303508	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG002_chrY_T0001268;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001268;transcript_name=HG002_chrY_T0001268;gene_name=UTY;ID=exon:HG002_chrY_T0001268:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14303454	14303508	.	-	0	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG002_chrY_T0001268;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001268;transcript_name=HG002_chrY_T0001268;gene_name=UTY;ID=CDS:HG002_chrY_T0001268:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14303509	14317527	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG002_chrY_T0001268;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001268;transcript_name=HG002_chrY_T0001268;gene_name=UTY;ID=intron:HG002_chrY_T0001268:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14317528	14317648	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG002_chrY_T0001268;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001268;transcript_name=HG002_chrY_T0001268;gene_name=UTY;ID=exon:HG002_chrY_T0001268:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14317528	14317648	.	-	1	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG002_chrY_T0001268;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001268;transcript_name=HG002_chrY_T0001268;gene_name=UTY;ID=CDS:HG002_chrY_T0001268:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14317649	14321269	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG002_chrY_T0001268;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001268;transcript_name=HG002_chrY_T0001268;gene_name=UTY;ID=intron:HG002_chrY_T0001268:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14321270	14321328	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG002_chrY_T0001268;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001268;transcript_name=HG002_chrY_T0001268;gene_name=UTY;ID=exon:HG002_chrY_T0001268:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14321270	14321328	.	-	0	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG002_chrY_T0001268;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001268;transcript_name=HG002_chrY_T0001268;gene_name=UTY;ID=CDS:HG002_chrY_T0001268:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14321329	14355535	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG002_chrY_T0001268;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001268;transcript_name=HG002_chrY_T0001268;gene_name=UTY;ID=intron:HG002_chrY_T0001268:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14355536	14355585	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG002_chrY_T0001268;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001268;transcript_name=HG002_chrY_T0001268;gene_name=UTY;ID=exon:HG002_chrY_T0001268:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14355536	14355585	.	-	2	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG002_chrY_T0001268;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001268;transcript_name=HG002_chrY_T0001268;gene_name=UTY;ID=CDS:HG002_chrY_T0001268:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14355586	14376639	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG002_chrY_T0001268;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001268;transcript_name=HG002_chrY_T0001268;gene_name=UTY;ID=intron:HG002_chrY_T0001268:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14376640	14376748	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG002_chrY_T0001268;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001268;transcript_name=HG002_chrY_T0001268;gene_name=UTY;ID=exon:HG002_chrY_T0001268:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14376640	14376748	.	-	0	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG002_chrY_T0001268;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001268;transcript_name=HG002_chrY_T0001268;gene_name=UTY;ID=CDS:HG002_chrY_T0001268:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14376749	14385772	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG002_chrY_T0001268;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001268;transcript_name=HG002_chrY_T0001268;gene_name=UTY;ID=intron:HG002_chrY_T0001268:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14385773	14385836	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG002_chrY_T0001268;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001268;transcript_name=HG002_chrY_T0001268;gene_name=UTY;ID=exon:HG002_chrY_T0001268:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14385773	14385836	.	-	1	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG002_chrY_T0001268;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001268;transcript_name=HG002_chrY_T0001268;gene_name=UTY;ID=CDS:HG002_chrY_T0001268:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14385837	14386032	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG002_chrY_T0001268;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001268;transcript_name=HG002_chrY_T0001268;gene_name=UTY;ID=intron:HG002_chrY_T0001268:8;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14386033	14386059	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG002_chrY_T0001268;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001268;transcript_name=HG002_chrY_T0001268;gene_name=UTY;ID=exon:HG002_chrY_T0001268:9;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14386033	14386059	.	-	1	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG002_chrY_T0001268;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001268;transcript_name=HG002_chrY_T0001268;gene_name=UTY;ID=CDS:HG002_chrY_T0001268:7;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	14299688	14386023	1000	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG002_chrY_T0001269;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_G0000413;transcript_name=HG002_chrY_T0001269;gene_name=UTY;ID=HG002_chrY_T0001269;Name=UTY
HG002_chrY	CAT	exon	14299688	14300429	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG002_chrY_T0001269;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001269;transcript_name=HG002_chrY_T0001269;gene_name=UTY;ID=exon:HG002_chrY_T0001269:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14300430	14303453	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG002_chrY_T0001269;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001269;transcript_name=HG002_chrY_T0001269;gene_name=UTY;ID=intron:HG002_chrY_T0001269:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14303454	14303508	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG002_chrY_T0001269;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001269;transcript_name=HG002_chrY_T0001269;gene_name=UTY;ID=exon:HG002_chrY_T0001269:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14303509	14317527	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG002_chrY_T0001269;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001269;transcript_name=HG002_chrY_T0001269;gene_name=UTY;ID=intron:HG002_chrY_T0001269:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14317528	14317648	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG002_chrY_T0001269;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001269;transcript_name=HG002_chrY_T0001269;gene_name=UTY;ID=exon:HG002_chrY_T0001269:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14317649	14321269	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG002_chrY_T0001269;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001269;transcript_name=HG002_chrY_T0001269;gene_name=UTY;ID=intron:HG002_chrY_T0001269:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14321270	14321328	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG002_chrY_T0001269;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001269;transcript_name=HG002_chrY_T0001269;gene_name=UTY;ID=exon:HG002_chrY_T0001269:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14321329	14355535	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG002_chrY_T0001269;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001269;transcript_name=HG002_chrY_T0001269;gene_name=UTY;ID=intron:HG002_chrY_T0001269:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14355536	14355585	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG002_chrY_T0001269;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001269;transcript_name=HG002_chrY_T0001269;gene_name=UTY;ID=exon:HG002_chrY_T0001269:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14355586	14376639	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG002_chrY_T0001269;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001269;transcript_name=HG002_chrY_T0001269;gene_name=UTY;ID=intron:HG002_chrY_T0001269:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14376640	14376748	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG002_chrY_T0001269;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001269;transcript_name=HG002_chrY_T0001269;gene_name=UTY;ID=exon:HG002_chrY_T0001269:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14376749	14385772	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG002_chrY_T0001269;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001269;transcript_name=HG002_chrY_T0001269;gene_name=UTY;ID=intron:HG002_chrY_T0001269:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14385773	14386023	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG002_chrY_T0001269;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001269;transcript_name=HG002_chrY_T0001269;gene_name=UTY;ID=exon:HG002_chrY_T0001269:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	14302838	14386497	100	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG002_chrY_T0001270;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_G0000413;transcript_name=HG002_chrY_T0001270;gene_name=UTY;ID=HG002_chrY_T0001270;Name=UTY
HG002_chrY	CAT	exon	14302838	14303508	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG002_chrY_T0001270;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001270;transcript_name=HG002_chrY_T0001270;gene_name=UTY;ID=exon:HG002_chrY_T0001270:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14303440	14303508	.	-	0	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG002_chrY_T0001270;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001270;transcript_name=HG002_chrY_T0001270;gene_name=UTY;ID=CDS:HG002_chrY_T0001270:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	14303440	14303442	.	-	0	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG002_chrY_T0001270;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001270;transcript_name=HG002_chrY_T0001270;gene_name=UTY;ID=stop_codon:HG002_chrY_T0001270;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14303509	14317527	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG002_chrY_T0001270;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001270;transcript_name=HG002_chrY_T0001270;gene_name=UTY;ID=intron:HG002_chrY_T0001270:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14317528	14317648	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG002_chrY_T0001270;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001270;transcript_name=HG002_chrY_T0001270;gene_name=UTY;ID=exon:HG002_chrY_T0001270:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14317528	14317648	.	-	1	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG002_chrY_T0001270;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001270;transcript_name=HG002_chrY_T0001270;gene_name=UTY;ID=CDS:HG002_chrY_T0001270:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14317649	14321269	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG002_chrY_T0001270;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001270;transcript_name=HG002_chrY_T0001270;gene_name=UTY;ID=intron:HG002_chrY_T0001270:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14321270	14321328	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG002_chrY_T0001270;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001270;transcript_name=HG002_chrY_T0001270;gene_name=UTY;ID=exon:HG002_chrY_T0001270:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14321270	14321328	.	-	0	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG002_chrY_T0001270;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001270;transcript_name=HG002_chrY_T0001270;gene_name=UTY;ID=CDS:HG002_chrY_T0001270:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14321329	14355535	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG002_chrY_T0001270;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001270;transcript_name=HG002_chrY_T0001270;gene_name=UTY;ID=intron:HG002_chrY_T0001270:2;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14355536	14355585	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG002_chrY_T0001270;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001270;transcript_name=HG002_chrY_T0001270;gene_name=UTY;ID=exon:HG002_chrY_T0001270:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14355536	14355585	.	-	2	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG002_chrY_T0001270;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001270;transcript_name=HG002_chrY_T0001270;gene_name=UTY;ID=CDS:HG002_chrY_T0001270:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14355586	14376639	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG002_chrY_T0001270;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001270;transcript_name=HG002_chrY_T0001270;gene_name=UTY;ID=intron:HG002_chrY_T0001270:3;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14376640	14376748	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG002_chrY_T0001270;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001270;transcript_name=HG002_chrY_T0001270;gene_name=UTY;ID=exon:HG002_chrY_T0001270:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14376640	14376748	.	-	0	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG002_chrY_T0001270;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001270;transcript_name=HG002_chrY_T0001270;gene_name=UTY;ID=CDS:HG002_chrY_T0001270:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14376749	14385772	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG002_chrY_T0001270;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001270;transcript_name=HG002_chrY_T0001270;gene_name=UTY;ID=intron:HG002_chrY_T0001270:4;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14385773	14385836	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG002_chrY_T0001270;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001270;transcript_name=HG002_chrY_T0001270;gene_name=UTY;ID=exon:HG002_chrY_T0001270:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14385773	14385836	.	-	1	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG002_chrY_T0001270;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001270;transcript_name=HG002_chrY_T0001270;gene_name=UTY;ID=CDS:HG002_chrY_T0001270:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14385837	14386032	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG002_chrY_T0001270;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001270;transcript_name=HG002_chrY_T0001270;gene_name=UTY;ID=intron:HG002_chrY_T0001270:5;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14386033	14386497	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG002_chrY_T0001270;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001270;transcript_name=HG002_chrY_T0001270;gene_name=UTY;ID=exon:HG002_chrY_T0001270:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14386033	14386184	.	-	0	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG002_chrY_T0001270;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001270;transcript_name=HG002_chrY_T0001270;gene_name=UTY;ID=CDS:HG002_chrY_T0001270:6;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	14386182	14386184	.	-	0	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG002_chrY_T0001270;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001270;transcript_name=HG002_chrY_T0001270;gene_name=UTY;ID=start_codon:HG002_chrY_T0001270;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	14385561	14386442	1000	-	.	source_transcript=ENST00000479713.1;source_transcript_name=UTY-208;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000479713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000479713.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000479713.1,ENST00000479713.1;transcript_id=HG002_chrY_T0001271;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_G0000413;transcript_name=HG002_chrY_T0001271;gene_name=UTY;ID=HG002_chrY_T0001271;Name=UTY
HG002_chrY	CAT	exon	14385561	14385836	.	-	.	source_transcript=ENST00000479713.1;source_transcript_name=UTY-208;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000479713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000479713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000479713.1,ENST00000479713.1;transcript_id=HG002_chrY_T0001271;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001271;transcript_name=HG002_chrY_T0001271;gene_name=UTY;ID=exon:HG002_chrY_T0001271:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14385837	14386032	.	-	.	source_transcript=ENST00000479713.1;source_transcript_name=UTY-208;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000479713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000479713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000479713.1,ENST00000479713.1;transcript_id=HG002_chrY_T0001271;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001271;transcript_name=HG002_chrY_T0001271;gene_name=UTY;ID=intron:HG002_chrY_T0001271:0;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14386033	14386442	.	-	.	source_transcript=ENST00000479713.1;source_transcript_name=UTY-208;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000479713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000479713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000479713.1,ENST00000479713.1;transcript_id=HG002_chrY_T0001271;gene_id=HG002_chrY_G0000413;Parent=HG002_chrY_T0001271;transcript_name=HG002_chrY_T0001271;gene_name=UTY;ID=exon:HG002_chrY_T0001271:1;Name=UTY;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	14193174	14193914	.	+	.	source_gene_common_name=PSMA6P1;source_gene=ENSG00000215414.4;alternative_source_transcripts=ENST00000400275.2,ENST00000400275.2;gene_id=HG002_chrY_G0000414;gene_biotype=processed_pseudogene;gene_name=PSMA6P1;gene_sources=liftoff;ID=HG002_chrY_G0000414;Name=PSMA6P1
HG002_chrY	CAT	transcript	14193174	14193914	1000	+	.	source_transcript=ENST00000400275.2;source_transcript_name=PSMA6P1-201;source_gene=ENSG00000215414.4;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215414.4;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000400275.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000400275.2;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PSMA6P1;alternative_source_transcripts=ENST00000400275.2,ENST00000400275.2;transcript_id=HG002_chrY_T0001265;gene_id=HG002_chrY_G0000414;Parent=HG002_chrY_G0000414;transcript_name=HG002_chrY_T0001265;gene_name=PSMA6P1;ID=HG002_chrY_T0001265;Name=PSMA6P1
HG002_chrY	CAT	exon	14193174	14193914	.	+	.	source_transcript=ENST00000400275.2;source_transcript_name=PSMA6P1-201;source_gene=ENSG00000215414.4;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215414.4;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000400275.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000400275.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PSMA6P1;alternative_source_transcripts=ENST00000400275.2,ENST00000400275.2;transcript_id=HG002_chrY_T0001265;gene_id=HG002_chrY_G0000414;Parent=HG002_chrY_T0001265;transcript_name=HG002_chrY_T0001265;gene_name=PSMA6P1;ID=exon:HG002_chrY_T0001265:0;Name=PSMA6P1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	14472427	14532765	.	+	.	source_gene_common_name=ENSG00000297994;source_gene=ENSG00000297994.1;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;gene_id=HG002_chrY_G0000415;gene_biotype=lncRNA;gene_name=ENSG00000297994;gene_sources=liftoff;ID=HG002_chrY_G0000415;Name=ENSG00000297994
HG002_chrY	CAT	transcript	14472427	14532765	1000	+	.	source_transcript=ENST00000752374.1;source_transcript_name=ENST00000752374;source_gene=ENSG00000297994.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297994.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752374.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297994;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;transcript_id=HG002_chrY_T0001272;gene_id=HG002_chrY_G0000415;Parent=HG002_chrY_G0000415;transcript_name=HG002_chrY_T0001272;gene_name=ENSG00000297994;ID=HG002_chrY_T0001272;Name=ENSG00000297994
HG002_chrY	CAT	exon	14472427	14472470	.	+	.	source_transcript=ENST00000752374.1;source_transcript_name=ENST00000752374;source_gene=ENSG00000297994.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297994.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297994;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;transcript_id=HG002_chrY_T0001272;gene_id=HG002_chrY_G0000415;Parent=HG002_chrY_T0001272;transcript_name=HG002_chrY_T0001272;gene_name=ENSG00000297994;ID=exon:HG002_chrY_T0001272:0;Name=ENSG00000297994;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14472471	14473239	.	+	.	source_transcript=ENST00000752374.1;source_transcript_name=ENST00000752374;source_gene=ENSG00000297994.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297994.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297994;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;transcript_id=HG002_chrY_T0001272;gene_id=HG002_chrY_G0000415;Parent=HG002_chrY_T0001272;transcript_name=HG002_chrY_T0001272;gene_name=ENSG00000297994;ID=intron:HG002_chrY_T0001272:0;Name=ENSG00000297994;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14473240	14473311	.	+	.	source_transcript=ENST00000752374.1;source_transcript_name=ENST00000752374;source_gene=ENSG00000297994.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297994.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297994;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;transcript_id=HG002_chrY_T0001272;gene_id=HG002_chrY_G0000415;Parent=HG002_chrY_T0001272;transcript_name=HG002_chrY_T0001272;gene_name=ENSG00000297994;ID=exon:HG002_chrY_T0001272:1;Name=ENSG00000297994;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14473312	14532444	.	+	.	source_transcript=ENST00000752374.1;source_transcript_name=ENST00000752374;source_gene=ENSG00000297994.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297994.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297994;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;transcript_id=HG002_chrY_T0001272;gene_id=HG002_chrY_G0000415;Parent=HG002_chrY_T0001272;transcript_name=HG002_chrY_T0001272;gene_name=ENSG00000297994;ID=intron:HG002_chrY_T0001272:1;Name=ENSG00000297994;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14532445	14532765	.	+	.	source_transcript=ENST00000752374.1;source_transcript_name=ENST00000752374;source_gene=ENSG00000297994.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297994.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297994;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;transcript_id=HG002_chrY_T0001272;gene_id=HG002_chrY_G0000415;Parent=HG002_chrY_T0001272;transcript_name=HG002_chrY_T0001272;gene_name=ENSG00000297994;ID=exon:HG002_chrY_T0001272:2;Name=ENSG00000297994;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	14610359	14612484	.	+	.	source_gene_common_name=TMSB4Y;source_gene=ENSG00000154620.6;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;gene_id=HG002_chrY_G0000416;gene_biotype=protein_coding;gene_name=TMSB4Y;gene_sources=liftoff;ID=HG002_chrY_G0000416;Name=TMSB4Y
HG002_chrY	CAT	transcript	14610359	14612484	100	+	.	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=HG002_chrY_T0001273;gene_id=HG002_chrY_G0000416;Parent=HG002_chrY_G0000416;transcript_name=HG002_chrY_T0001273;gene_name=TMSB4Y;ID=HG002_chrY_T0001273;Name=TMSB4Y
HG002_chrY	CAT	exon	14610359	14610895	.	+	.	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=HG002_chrY_T0001273;gene_id=HG002_chrY_G0000416;Parent=HG002_chrY_T0001273;transcript_name=HG002_chrY_T0001273;gene_name=TMSB4Y;ID=exon:HG002_chrY_T0001273:0;Name=TMSB4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14610796	14610895	.	+	0	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=HG002_chrY_T0001273;gene_id=HG002_chrY_G0000416;Parent=HG002_chrY_T0001273;transcript_name=HG002_chrY_T0001273;gene_name=TMSB4Y;ID=CDS:HG002_chrY_T0001273:0;Name=TMSB4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	14610796	14610798	.	+	0	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=HG002_chrY_T0001273;gene_id=HG002_chrY_G0000416;Parent=HG002_chrY_T0001273;transcript_name=HG002_chrY_T0001273;gene_name=TMSB4Y;ID=start_codon:HG002_chrY_T0001273;Name=TMSB4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14610896	14611684	.	+	.	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=HG002_chrY_T0001273;gene_id=HG002_chrY_G0000416;Parent=HG002_chrY_T0001273;transcript_name=HG002_chrY_T0001273;gene_name=TMSB4Y;ID=intron:HG002_chrY_T0001273:0;Name=TMSB4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14611685	14612484	.	+	.	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=HG002_chrY_T0001273;gene_id=HG002_chrY_G0000416;Parent=HG002_chrY_T0001273;transcript_name=HG002_chrY_T0001273;gene_name=TMSB4Y;ID=exon:HG002_chrY_T0001273:1;Name=TMSB4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14611685	14611719	.	+	2	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=HG002_chrY_T0001273;gene_id=HG002_chrY_G0000416;Parent=HG002_chrY_T0001273;transcript_name=HG002_chrY_T0001273;gene_name=TMSB4Y;ID=CDS:HG002_chrY_T0001273:1;Name=TMSB4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	14611717	14611719	.	+	0	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=HG002_chrY_T0001273;gene_id=HG002_chrY_G0000416;Parent=HG002_chrY_T0001273;transcript_name=HG002_chrY_T0001273;gene_name=TMSB4Y;ID=stop_codon:HG002_chrY_T0001273;Name=TMSB4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	14610362	14822725	.	+	.	source_gene_common_name=ENSG00000290853;source_gene=ENSG00000290853.2;gene_id=HG002_chrY_G0000417;gene_biotype=lncRNA;gene_name=ENSG00000290853;gene_sources=liftoff;ID=HG002_chrY_G0000417;Name=ENSG00000290853
HG002_chrY	CAT	transcript	14610362	14795460	1000	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001274;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_G0000417;transcript_name=HG002_chrY_T0001274;gene_name=ENSG00000290853;ID=HG002_chrY_T0001274;Name=ENSG00000290853
HG002_chrY	CAT	exon	14610362	14610895	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001274;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001274;transcript_name=HG002_chrY_T0001274;gene_name=ENSG00000290853;ID=exon:HG002_chrY_T0001274:0;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14610896	14661095	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001274;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001274;transcript_name=HG002_chrY_T0001274;gene_name=ENSG00000290853;ID=intron:HG002_chrY_T0001274:0;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14661096	14661245	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001274;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001274;transcript_name=HG002_chrY_T0001274;gene_name=ENSG00000290853;ID=exon:HG002_chrY_T0001274:1;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14661246	14764996	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001274;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001274;transcript_name=HG002_chrY_T0001274;gene_name=ENSG00000290853;ID=intron:HG002_chrY_T0001274:1;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14764997	14765126	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001274;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001274;transcript_name=HG002_chrY_T0001274;gene_name=ENSG00000290853;ID=exon:HG002_chrY_T0001274:2;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14765127	14766147	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001274;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001274;transcript_name=HG002_chrY_T0001274;gene_name=ENSG00000290853;ID=intron:HG002_chrY_T0001274:2;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14766148	14766301	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001274;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001274;transcript_name=HG002_chrY_T0001274;gene_name=ENSG00000290853;ID=exon:HG002_chrY_T0001274:3;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14766302	14775546	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001274;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001274;transcript_name=HG002_chrY_T0001274;gene_name=ENSG00000290853;ID=intron:HG002_chrY_T0001274:3;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14775547	14775608	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001274;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001274;transcript_name=HG002_chrY_T0001274;gene_name=ENSG00000290853;ID=exon:HG002_chrY_T0001274:4;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14775609	14778112	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001274;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001274;transcript_name=HG002_chrY_T0001274;gene_name=ENSG00000290853;ID=intron:HG002_chrY_T0001274:4;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14778113	14778278	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001274;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001274;transcript_name=HG002_chrY_T0001274;gene_name=ENSG00000290853;ID=exon:HG002_chrY_T0001274:5;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14778279	14793737	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001274;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001274;transcript_name=HG002_chrY_T0001274;gene_name=ENSG00000290853;ID=intron:HG002_chrY_T0001274:5;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14793738	14795460	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001274;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001274;transcript_name=HG002_chrY_T0001274;gene_name=ENSG00000290853;ID=exon:HG002_chrY_T0001274:6;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	14658253	14765074	1000	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001276;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_G0000417;transcript_name=HG002_chrY_T0001276;gene_name=ENSG00000290853;ID=HG002_chrY_T0001276;Name=ENSG00000290853
HG002_chrY	CAT	exon	14658253	14658465	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001276;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001276;transcript_name=HG002_chrY_T0001276;gene_name=ENSG00000290853;ID=exon:HG002_chrY_T0001276:0;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14658466	14659553	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001276;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001276;transcript_name=HG002_chrY_T0001276;gene_name=ENSG00000290853;ID=intron:HG002_chrY_T0001276:0;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14659554	14659619	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001276;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001276;transcript_name=HG002_chrY_T0001276;gene_name=ENSG00000290853;ID=exon:HG002_chrY_T0001276:1;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14659620	14661095	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001276;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001276;transcript_name=HG002_chrY_T0001276;gene_name=ENSG00000290853;ID=intron:HG002_chrY_T0001276:1;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14661096	14661245	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001276;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001276;transcript_name=HG002_chrY_T0001276;gene_name=ENSG00000290853;ID=exon:HG002_chrY_T0001276:2;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14661246	14697374	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001276;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001276;transcript_name=HG002_chrY_T0001276;gene_name=ENSG00000290853;ID=intron:HG002_chrY_T0001276:2;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14697375	14697422	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001276;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001276;transcript_name=HG002_chrY_T0001276;gene_name=ENSG00000290853;ID=exon:HG002_chrY_T0001276:3;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14697423	14760924	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001276;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001276;transcript_name=HG002_chrY_T0001276;gene_name=ENSG00000290853;ID=intron:HG002_chrY_T0001276:3;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14760925	14761058	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001276;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001276;transcript_name=HG002_chrY_T0001276;gene_name=ENSG00000290853;ID=exon:HG002_chrY_T0001276:4;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14761059	14764996	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001276;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001276;transcript_name=HG002_chrY_T0001276;gene_name=ENSG00000290853;ID=intron:HG002_chrY_T0001276:4;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14764997	14765074	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001276;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001276;transcript_name=HG002_chrY_T0001276;gene_name=ENSG00000290853;ID=exon:HG002_chrY_T0001276:5;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	14659558	14778186	1000	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001277;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_G0000417;transcript_name=HG002_chrY_T0001277;gene_name=ENSG00000290853;ID=HG002_chrY_T0001277;Name=ENSG00000290853
HG002_chrY	CAT	exon	14659558	14659619	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001277;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001277;transcript_name=HG002_chrY_T0001277;gene_name=ENSG00000290853;ID=exon:HG002_chrY_T0001277:0;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14659620	14661095	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001277;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001277;transcript_name=HG002_chrY_T0001277;gene_name=ENSG00000290853;ID=intron:HG002_chrY_T0001277:0;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14661096	14661245	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001277;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001277;transcript_name=HG002_chrY_T0001277;gene_name=ENSG00000290853;ID=exon:HG002_chrY_T0001277:1;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14661246	14697374	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001277;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001277;transcript_name=HG002_chrY_T0001277;gene_name=ENSG00000290853;ID=intron:HG002_chrY_T0001277:1;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14697375	14697422	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001277;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001277;transcript_name=HG002_chrY_T0001277;gene_name=ENSG00000290853;ID=exon:HG002_chrY_T0001277:2;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14697423	14764996	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001277;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001277;transcript_name=HG002_chrY_T0001277;gene_name=ENSG00000290853;ID=intron:HG002_chrY_T0001277:2;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14764997	14765126	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001277;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001277;transcript_name=HG002_chrY_T0001277;gene_name=ENSG00000290853;ID=exon:HG002_chrY_T0001277:3;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14765127	14766147	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001277;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001277;transcript_name=HG002_chrY_T0001277;gene_name=ENSG00000290853;ID=intron:HG002_chrY_T0001277:3;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14766148	14766301	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001277;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001277;transcript_name=HG002_chrY_T0001277;gene_name=ENSG00000290853;ID=exon:HG002_chrY_T0001277:4;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14766302	14775546	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001277;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001277;transcript_name=HG002_chrY_T0001277;gene_name=ENSG00000290853;ID=intron:HG002_chrY_T0001277:4;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14775547	14775608	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001277;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001277;transcript_name=HG002_chrY_T0001277;gene_name=ENSG00000290853;ID=exon:HG002_chrY_T0001277:5;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14775609	14778112	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001277;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001277;transcript_name=HG002_chrY_T0001277;gene_name=ENSG00000290853;ID=intron:HG002_chrY_T0001277:5;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14778113	14778186	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001277;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001277;transcript_name=HG002_chrY_T0001277;gene_name=ENSG00000290853;ID=exon:HG002_chrY_T0001277:6;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	14778162	14822725	1000	+	.	source_transcript=ENST00000766958.1;source_transcript_name=ENST00000766958;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766958.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001278;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_G0000417;transcript_name=HG002_chrY_T0001278;gene_name=ENSG00000290853;ID=HG002_chrY_T0001278;Name=ENSG00000290853
HG002_chrY	CAT	exon	14778162	14778278	.	+	.	source_transcript=ENST00000766958.1;source_transcript_name=ENST00000766958;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001278;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001278;transcript_name=HG002_chrY_T0001278;gene_name=ENSG00000290853;ID=exon:HG002_chrY_T0001278:0;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14778279	14793737	.	+	.	source_transcript=ENST00000766958.1;source_transcript_name=ENST00000766958;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001278;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001278;transcript_name=HG002_chrY_T0001278;gene_name=ENSG00000290853;ID=intron:HG002_chrY_T0001278:0;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14793738	14793943	.	+	.	source_transcript=ENST00000766958.1;source_transcript_name=ENST00000766958;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001278;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001278;transcript_name=HG002_chrY_T0001278;gene_name=ENSG00000290853;ID=exon:HG002_chrY_T0001278:1;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14793944	14822246	.	+	.	source_transcript=ENST00000766958.1;source_transcript_name=ENST00000766958;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001278;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001278;transcript_name=HG002_chrY_T0001278;gene_name=ENSG00000290853;ID=intron:HG002_chrY_T0001278:1;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14822247	14822725	.	+	.	source_transcript=ENST00000766958.1;source_transcript_name=ENST00000766958;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG002_chrY_T0001278;gene_id=HG002_chrY_G0000417;Parent=HG002_chrY_T0001278;transcript_name=HG002_chrY_T0001278;gene_name=ENSG00000290853;ID=exon:HG002_chrY_T0001278:2;Name=ENSG00000290853;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	14658116	14822305	.	+	.	source_gene_common_name=ANOS2P;source_gene=ENSG00000241859.8;gene_id=HG002_chrY_G0000418;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ANOS2P;gene_sources=liftoff;ID=HG002_chrY_G0000418;Name=ANOS2P
HG002_chrY	CAT	transcript	14658116	14822305	1000	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG002_chrY_T0001275;gene_id=HG002_chrY_G0000418;Parent=HG002_chrY_G0000418;transcript_name=HG002_chrY_T0001275;gene_name=ANOS2P;ID=HG002_chrY_T0001275;Name=ANOS2P
HG002_chrY	CAT	exon	14658116	14658465	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG002_chrY_T0001275;gene_id=HG002_chrY_G0000418;Parent=HG002_chrY_T0001275;transcript_name=HG002_chrY_T0001275;gene_name=ANOS2P;ID=exon:HG002_chrY_T0001275:0;Name=ANOS2P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14658466	14697374	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG002_chrY_T0001275;gene_id=HG002_chrY_G0000418;Parent=HG002_chrY_T0001275;transcript_name=HG002_chrY_T0001275;gene_name=ANOS2P;ID=intron:HG002_chrY_T0001275:0;Name=ANOS2P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14697375	14697422	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG002_chrY_T0001275;gene_id=HG002_chrY_G0000418;Parent=HG002_chrY_T0001275;transcript_name=HG002_chrY_T0001275;gene_name=ANOS2P;ID=exon:HG002_chrY_T0001275:1;Name=ANOS2P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14697423	14764981	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG002_chrY_T0001275;gene_id=HG002_chrY_G0000418;Parent=HG002_chrY_T0001275;transcript_name=HG002_chrY_T0001275;gene_name=ANOS2P;ID=intron:HG002_chrY_T0001275:1;Name=ANOS2P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14764982	14765204	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG002_chrY_T0001275;gene_id=HG002_chrY_G0000418;Parent=HG002_chrY_T0001275;transcript_name=HG002_chrY_T0001275;gene_name=ANOS2P;ID=exon:HG002_chrY_T0001275:2;Name=ANOS2P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14765205	14775546	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG002_chrY_T0001275;gene_id=HG002_chrY_G0000418;Parent=HG002_chrY_T0001275;transcript_name=HG002_chrY_T0001275;gene_name=ANOS2P;ID=intron:HG002_chrY_T0001275:2;Name=ANOS2P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14775547	14775730	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG002_chrY_T0001275;gene_id=HG002_chrY_G0000418;Parent=HG002_chrY_T0001275;transcript_name=HG002_chrY_T0001275;gene_name=ANOS2P;ID=exon:HG002_chrY_T0001275:3;Name=ANOS2P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14775731	14778161	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG002_chrY_T0001275;gene_id=HG002_chrY_G0000418;Parent=HG002_chrY_T0001275;transcript_name=HG002_chrY_T0001275;gene_name=ANOS2P;ID=intron:HG002_chrY_T0001275:3;Name=ANOS2P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14778162	14778278	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG002_chrY_T0001275;gene_id=HG002_chrY_G0000418;Parent=HG002_chrY_T0001275;transcript_name=HG002_chrY_T0001275;gene_name=ANOS2P;ID=exon:HG002_chrY_T0001275:4;Name=ANOS2P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14778279	14793737	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG002_chrY_T0001275;gene_id=HG002_chrY_G0000418;Parent=HG002_chrY_T0001275;transcript_name=HG002_chrY_T0001275;gene_name=ANOS2P;ID=intron:HG002_chrY_T0001275:4;Name=ANOS2P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14793738	14793943	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG002_chrY_T0001275;gene_id=HG002_chrY_G0000418;Parent=HG002_chrY_T0001275;transcript_name=HG002_chrY_T0001275;gene_name=ANOS2P;ID=exon:HG002_chrY_T0001275:5;Name=ANOS2P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14793944	14809353	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG002_chrY_T0001275;gene_id=HG002_chrY_G0000418;Parent=HG002_chrY_T0001275;transcript_name=HG002_chrY_T0001275;gene_name=ANOS2P;ID=intron:HG002_chrY_T0001275:5;Name=ANOS2P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14809354	14809448	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG002_chrY_T0001275;gene_id=HG002_chrY_G0000418;Parent=HG002_chrY_T0001275;transcript_name=HG002_chrY_T0001275;gene_name=ANOS2P;ID=exon:HG002_chrY_T0001275:6;Name=ANOS2P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14809449	14812160	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG002_chrY_T0001275;gene_id=HG002_chrY_G0000418;Parent=HG002_chrY_T0001275;transcript_name=HG002_chrY_T0001275;gene_name=ANOS2P;ID=intron:HG002_chrY_T0001275:6;Name=ANOS2P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14812161	14812331	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG002_chrY_T0001275;gene_id=HG002_chrY_G0000418;Parent=HG002_chrY_T0001275;transcript_name=HG002_chrY_T0001275;gene_name=ANOS2P;ID=exon:HG002_chrY_T0001275:7;Name=ANOS2P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14812332	14813305	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG002_chrY_T0001275;gene_id=HG002_chrY_G0000418;Parent=HG002_chrY_T0001275;transcript_name=HG002_chrY_T0001275;gene_name=ANOS2P;ID=intron:HG002_chrY_T0001275:7;Name=ANOS2P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14813306	14813526	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG002_chrY_T0001275;gene_id=HG002_chrY_G0000418;Parent=HG002_chrY_T0001275;transcript_name=HG002_chrY_T0001275;gene_name=ANOS2P;ID=exon:HG002_chrY_T0001275:8;Name=ANOS2P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14813527	14814651	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG002_chrY_T0001275;gene_id=HG002_chrY_G0000418;Parent=HG002_chrY_T0001275;transcript_name=HG002_chrY_T0001275;gene_name=ANOS2P;ID=intron:HG002_chrY_T0001275:8;Name=ANOS2P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14814652	14814793	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG002_chrY_T0001275;gene_id=HG002_chrY_G0000418;Parent=HG002_chrY_T0001275;transcript_name=HG002_chrY_T0001275;gene_name=ANOS2P;ID=exon:HG002_chrY_T0001275:9;Name=ANOS2P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14814794	14822246	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG002_chrY_T0001275;gene_id=HG002_chrY_G0000418;Parent=HG002_chrY_T0001275;transcript_name=HG002_chrY_T0001275;gene_name=ANOS2P;ID=intron:HG002_chrY_T0001275:9;Name=ANOS2P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14822247	14822305	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG002_chrY_T0001275;gene_id=HG002_chrY_G0000418;Parent=HG002_chrY_T0001275;transcript_name=HG002_chrY_T0001275;gene_name=ANOS2P;ID=exon:HG002_chrY_T0001275:10;Name=ANOS2P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	14892219	14892920	.	-	.	source_gene_common_name=VCY;source_gene=ENSG00000129864.7;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;gene_id=HG002_chrY_G0000419;gene_biotype=protein_coding;gene_name=VCY;gene_sources=liftoff;ID=HG002_chrY_G0000419;Name=VCY
HG002_chrY	CAT	transcript	14892219	14892920	100	-	.	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=HG002_chrY_T0001279;gene_id=HG002_chrY_G0000419;Parent=HG002_chrY_G0000419;transcript_name=HG002_chrY_T0001279;gene_name=VCY;ID=HG002_chrY_T0001279;Name=VCY
HG002_chrY	CAT	exon	14892219	14892593	.	-	.	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=HG002_chrY_T0001279;gene_id=HG002_chrY_G0000419;Parent=HG002_chrY_T0001279;transcript_name=HG002_chrY_T0001279;gene_name=VCY;ID=exon:HG002_chrY_T0001279:0;Name=VCY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14892318	14892593	.	-	0	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=HG002_chrY_T0001279;gene_id=HG002_chrY_G0000419;Parent=HG002_chrY_T0001279;transcript_name=HG002_chrY_T0001279;gene_name=VCY;ID=CDS:HG002_chrY_T0001279:0;Name=VCY;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	14892318	14892320	.	-	0	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=HG002_chrY_T0001279;gene_id=HG002_chrY_G0000419;Parent=HG002_chrY_T0001279;transcript_name=HG002_chrY_T0001279;gene_name=VCY;ID=stop_codon:HG002_chrY_T0001279;Name=VCY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14892594	14892785	.	-	.	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=HG002_chrY_T0001279;gene_id=HG002_chrY_G0000419;Parent=HG002_chrY_T0001279;transcript_name=HG002_chrY_T0001279;gene_name=VCY;ID=intron:HG002_chrY_T0001279:0;Name=VCY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14892786	14892920	.	-	.	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=HG002_chrY_T0001279;gene_id=HG002_chrY_G0000419;Parent=HG002_chrY_T0001279;transcript_name=HG002_chrY_T0001279;gene_name=VCY;ID=exon:HG002_chrY_T0001279:1;Name=VCY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14892786	14892887	.	-	0	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=HG002_chrY_T0001279;gene_id=HG002_chrY_G0000419;Parent=HG002_chrY_T0001279;transcript_name=HG002_chrY_T0001279;gene_name=VCY;ID=CDS:HG002_chrY_T0001279:1;Name=VCY;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	14892885	14892887	.	-	0	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=HG002_chrY_T0001279;gene_id=HG002_chrY_G0000419;Parent=HG002_chrY_T0001279;transcript_name=HG002_chrY_T0001279;gene_name=VCY;ID=start_codon:HG002_chrY_T0001279;Name=VCY;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	14962707	14963438	.	+	.	source_gene_common_name=VCY1B;source_gene=ENSG00000129862.7;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;gene_id=HG002_chrY_G0000420;gene_biotype=protein_coding;gene_name=VCY1B;gene_sources=liftoff;ID=HG002_chrY_G0000420;Name=VCY1B
HG002_chrY	CAT	transcript	14962707	14963438	100	+	.	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=HG002_chrY_T0001280;gene_id=HG002_chrY_G0000420;Parent=HG002_chrY_G0000420;transcript_name=HG002_chrY_T0001280;gene_name=VCY1B;ID=HG002_chrY_T0001280;Name=VCY1B
HG002_chrY	CAT	exon	14962707	14962871	.	+	.	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=HG002_chrY_T0001280;gene_id=HG002_chrY_G0000420;Parent=HG002_chrY_T0001280;transcript_name=HG002_chrY_T0001280;gene_name=VCY1B;ID=exon:HG002_chrY_T0001280:0;Name=VCY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14962770	14962871	.	+	0	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=HG002_chrY_T0001280;gene_id=HG002_chrY_G0000420;Parent=HG002_chrY_T0001280;transcript_name=HG002_chrY_T0001280;gene_name=VCY1B;ID=CDS:HG002_chrY_T0001280:0;Name=VCY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	14962770	14962772	.	+	0	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=HG002_chrY_T0001280;gene_id=HG002_chrY_G0000420;Parent=HG002_chrY_T0001280;transcript_name=HG002_chrY_T0001280;gene_name=VCY1B;ID=start_codon:HG002_chrY_T0001280;Name=VCY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14962872	14963063	.	+	.	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=HG002_chrY_T0001280;gene_id=HG002_chrY_G0000420;Parent=HG002_chrY_T0001280;transcript_name=HG002_chrY_T0001280;gene_name=VCY1B;ID=intron:HG002_chrY_T0001280:0;Name=VCY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14963064	14963438	.	+	.	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=HG002_chrY_T0001280;gene_id=HG002_chrY_G0000420;Parent=HG002_chrY_T0001280;transcript_name=HG002_chrY_T0001280;gene_name=VCY1B;ID=exon:HG002_chrY_T0001280:1;Name=VCY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	14963064	14963339	.	+	0	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=HG002_chrY_T0001280;gene_id=HG002_chrY_G0000420;Parent=HG002_chrY_T0001280;transcript_name=HG002_chrY_T0001280;gene_name=VCY1B;ID=CDS:HG002_chrY_T0001280:1;Name=VCY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	14963337	14963339	.	+	0	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=HG002_chrY_T0001280;gene_id=HG002_chrY_G0000420;Parent=HG002_chrY_T0001280;transcript_name=HG002_chrY_T0001280;gene_name=VCY1B;ID=stop_codon:HG002_chrY_T0001280;Name=VCY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	14987555	14993080	.	+	.	source_gene_common_name=PNPLA4P1;source_gene=ENSG00000235451.1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;gene_id=HG002_chrY_G0000421;gene_biotype=unprocessed_pseudogene;gene_name=PNPLA4P1;gene_sources=liftoff;ID=HG002_chrY_G0000421;Name=PNPLA4P1
HG002_chrY	CAT	transcript	14987555	14993080	1000	+	.	source_transcript=ENST00000458328.1;source_transcript_name=PNPLA4P1-201;source_gene=ENSG00000235451.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235451.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000458328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458328.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PNPLA4P1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;transcript_id=HG002_chrY_T0001281;gene_id=HG002_chrY_G0000421;Parent=HG002_chrY_G0000421;transcript_name=HG002_chrY_T0001281;gene_name=PNPLA4P1;ID=HG002_chrY_T0001281;Name=PNPLA4P1
HG002_chrY	CAT	exon	14987555	14987649	.	+	.	source_transcript=ENST00000458328.1;source_transcript_name=PNPLA4P1-201;source_gene=ENSG00000235451.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235451.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000458328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PNPLA4P1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;transcript_id=HG002_chrY_T0001281;gene_id=HG002_chrY_G0000421;Parent=HG002_chrY_T0001281;transcript_name=HG002_chrY_T0001281;gene_name=PNPLA4P1;ID=exon:HG002_chrY_T0001281:0;Name=PNPLA4P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14987650	14987785	.	+	.	source_transcript=ENST00000458328.1;source_transcript_name=PNPLA4P1-201;source_gene=ENSG00000235451.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235451.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000458328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PNPLA4P1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;transcript_id=HG002_chrY_T0001281;gene_id=HG002_chrY_G0000421;Parent=HG002_chrY_T0001281;transcript_name=HG002_chrY_T0001281;gene_name=PNPLA4P1;ID=intron:HG002_chrY_T0001281:0;Name=PNPLA4P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14987786	14987929	.	+	.	source_transcript=ENST00000458328.1;source_transcript_name=PNPLA4P1-201;source_gene=ENSG00000235451.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235451.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000458328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PNPLA4P1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;transcript_id=HG002_chrY_T0001281;gene_id=HG002_chrY_G0000421;Parent=HG002_chrY_T0001281;transcript_name=HG002_chrY_T0001281;gene_name=PNPLA4P1;ID=exon:HG002_chrY_T0001281:1;Name=PNPLA4P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	14987930	14993014	.	+	.	source_transcript=ENST00000458328.1;source_transcript_name=PNPLA4P1-201;source_gene=ENSG00000235451.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235451.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000458328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PNPLA4P1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;transcript_id=HG002_chrY_T0001281;gene_id=HG002_chrY_G0000421;Parent=HG002_chrY_T0001281;transcript_name=HG002_chrY_T0001281;gene_name=PNPLA4P1;ID=intron:HG002_chrY_T0001281:1;Name=PNPLA4P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	14993015	14993080	.	+	.	source_transcript=ENST00000458328.1;source_transcript_name=PNPLA4P1-201;source_gene=ENSG00000235451.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235451.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000458328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PNPLA4P1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;transcript_id=HG002_chrY_T0001281;gene_id=HG002_chrY_G0000421;Parent=HG002_chrY_T0001281;transcript_name=HG002_chrY_T0001281;gene_name=PNPLA4P1;ID=exon:HG002_chrY_T0001281:2;Name=PNPLA4P1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	15008068	15008203	.	-	.	source_gene_common_name=ENSG00000289706;source_gene=ENSG00000289706.1;alternative_source_transcripts=ENST00000696463.1,ENST00000696463.1;gene_id=HG002_chrY_G0000422;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000289706;gene_sources=liftoff;ID=HG002_chrY_G0000422;Name=ENSG00000289706
HG002_chrY	CAT	transcript	15008068	15008203	1000	-	.	source_transcript=ENST00000696463.1;source_transcript_name=ENST00000696463;source_gene=ENSG00000289706.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000289706.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000696463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696463.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289706;alternative_source_transcripts=ENST00000696463.1,ENST00000696463.1;transcript_id=HG002_chrY_T0001282;gene_id=HG002_chrY_G0000422;Parent=HG002_chrY_G0000422;transcript_name=HG002_chrY_T0001282;gene_name=ENSG00000289706;ID=HG002_chrY_T0001282;Name=ENSG00000289706
HG002_chrY	CAT	exon	15008068	15008203	.	-	.	source_transcript=ENST00000696463.1;source_transcript_name=ENST00000696463;source_gene=ENSG00000289706.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000289706.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000696463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289706;alternative_source_transcripts=ENST00000696463.1,ENST00000696463.1;transcript_id=HG002_chrY_T0001282;gene_id=HG002_chrY_G0000422;Parent=HG002_chrY_T0001282;transcript_name=HG002_chrY_T0001282;gene_name=ENSG00000289706;ID=exon:HG002_chrY_T0001282:0;Name=ENSG00000289706;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	15182660	15183937	.	-	.	source_gene_common_name=ENSG00000223517;source_gene=ENSG00000223517.1;alternative_source_transcripts=ENST00000435111.1,ENST00000435111.1;gene_id=HG002_chrY_G0000423;gene_biotype=lncRNA;gene_name=ENSG00000223517;gene_sources=liftoff;ID=HG002_chrY_G0000423;Name=ENSG00000223517
HG002_chrY	CAT	transcript	15182660	15183937	1000	-	.	source_transcript=ENST00000435111.1;source_transcript_name=ENST00000435111;source_gene=ENSG00000223517.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223517.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000435111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435111.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223517;alternative_source_transcripts=ENST00000435111.1,ENST00000435111.1;transcript_id=HG002_chrY_T0001283;gene_id=HG002_chrY_G0000423;Parent=HG002_chrY_G0000423;transcript_name=HG002_chrY_T0001283;gene_name=ENSG00000223517;ID=HG002_chrY_T0001283;Name=ENSG00000223517
HG002_chrY	CAT	exon	15182660	15183059	.	-	.	source_transcript=ENST00000435111.1;source_transcript_name=ENST00000435111;source_gene=ENSG00000223517.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223517.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000435111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223517;alternative_source_transcripts=ENST00000435111.1,ENST00000435111.1;transcript_id=HG002_chrY_T0001283;gene_id=HG002_chrY_G0000423;Parent=HG002_chrY_T0001283;transcript_name=HG002_chrY_T0001283;gene_name=ENSG00000223517;ID=exon:HG002_chrY_T0001283:0;Name=ENSG00000223517;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15183060	15183797	.	-	.	source_transcript=ENST00000435111.1;source_transcript_name=ENST00000435111;source_gene=ENSG00000223517.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223517.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000435111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223517;alternative_source_transcripts=ENST00000435111.1,ENST00000435111.1;transcript_id=HG002_chrY_T0001283;gene_id=HG002_chrY_G0000423;Parent=HG002_chrY_T0001283;transcript_name=HG002_chrY_T0001283;gene_name=ENSG00000223517;ID=intron:HG002_chrY_T0001283:0;Name=ENSG00000223517;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15183798	15183937	.	-	.	source_transcript=ENST00000435111.1;source_transcript_name=ENST00000435111;source_gene=ENSG00000223517.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223517.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000435111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223517;alternative_source_transcripts=ENST00000435111.1,ENST00000435111.1;transcript_id=HG002_chrY_T0001283;gene_id=HG002_chrY_G0000423;Parent=HG002_chrY_T0001283;transcript_name=HG002_chrY_T0001283;gene_name=ENSG00000223517;ID=exon:HG002_chrY_T0001283:1;Name=ENSG00000223517;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	15429020	15752033	.	+	.	source_gene_common_name=NLGN4Y;source_gene=ENSG00000165246.15;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;gene_id=HG002_chrY_G0000424;gene_biotype=protein_coding;gene_name=NLGN4Y;gene_sources=liftoff;ID=HG002_chrY_G0000424;Name=NLGN4Y
HG002_chrY	CAT	transcript	15429020	15752018	100	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG002_chrY_T0001284;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_G0000424;transcript_name=HG002_chrY_T0001284;gene_name=NLGN4Y;ID=HG002_chrY_T0001284;Name=NLGN4Y
HG002_chrY	CAT	exon	15429020	15429388	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG002_chrY_T0001284;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001284;transcript_name=HG002_chrY_T0001284;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001284:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15429389	15528469	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG002_chrY_T0001284;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001284;transcript_name=HG002_chrY_T0001284;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001284:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15528470	15529052	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG002_chrY_T0001284;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001284;transcript_name=HG002_chrY_T0001284;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001284:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15528581	15529052	.	+	0	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG002_chrY_T0001284;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001284;transcript_name=HG002_chrY_T0001284;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001284:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	15528581	15528583	.	+	0	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG002_chrY_T0001284;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001284;transcript_name=HG002_chrY_T0001284;gene_name=NLGN4Y;ID=start_codon:HG002_chrY_T0001284;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15529053	15625930	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG002_chrY_T0001284;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001284;transcript_name=HG002_chrY_T0001284;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001284:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15625931	15625990	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG002_chrY_T0001284;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001284;transcript_name=HG002_chrY_T0001284;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001284:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15625931	15625990	.	+	2	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG002_chrY_T0001284;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001284;transcript_name=HG002_chrY_T0001284;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001284:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15625991	15629567	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG002_chrY_T0001284;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001284;transcript_name=HG002_chrY_T0001284;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001284:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15629568	15629720	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG002_chrY_T0001284;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001284;transcript_name=HG002_chrY_T0001284;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001284:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15629568	15629720	.	+	2	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG002_chrY_T0001284;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001284;transcript_name=HG002_chrY_T0001284;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001284:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15629721	15730592	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG002_chrY_T0001284;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001284;transcript_name=HG002_chrY_T0001284;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001284:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15730593	15730778	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG002_chrY_T0001284;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001284;transcript_name=HG002_chrY_T0001284;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001284:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15730593	15730778	.	+	2	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG002_chrY_T0001284;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001284;transcript_name=HG002_chrY_T0001284;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001284:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15730779	15736108	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG002_chrY_T0001284;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001284;transcript_name=HG002_chrY_T0001284;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001284:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15736109	15736898	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG002_chrY_T0001284;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001284;transcript_name=HG002_chrY_T0001284;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001284:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15736109	15736898	.	+	2	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG002_chrY_T0001284;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001284;transcript_name=HG002_chrY_T0001284;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001284:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15736899	15746791	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG002_chrY_T0001284;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001284;transcript_name=HG002_chrY_T0001284;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001284:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15746792	15752018	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG002_chrY_T0001284;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001284;transcript_name=HG002_chrY_T0001284;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001284:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15746792	15747641	.	+	1	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG002_chrY_T0001284;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001284;transcript_name=HG002_chrY_T0001284;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001284:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	15747639	15747641	.	+	0	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG002_chrY_T0001284;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001284;transcript_name=HG002_chrY_T0001284;gene_name=NLGN4Y;ID=stop_codon:HG002_chrY_T0001284;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	15429085	15528958	1000	+	.	source_transcript=ENST00000471252.1;source_transcript_name=NLGN4Y-206;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471252.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000471252.1,ENST00000471252.1;transcript_id=HG002_chrY_T0001285;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_G0000424;transcript_name=HG002_chrY_T0001285;gene_name=NLGN4Y;ID=HG002_chrY_T0001285;Name=NLGN4Y
HG002_chrY	CAT	exon	15429085	15429388	.	+	.	source_transcript=ENST00000471252.1;source_transcript_name=NLGN4Y-206;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471252.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000471252.1,ENST00000471252.1;transcript_id=HG002_chrY_T0001285;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001285;transcript_name=HG002_chrY_T0001285;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001285:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15429389	15528469	.	+	.	source_transcript=ENST00000471252.1;source_transcript_name=NLGN4Y-206;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471252.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000471252.1,ENST00000471252.1;transcript_id=HG002_chrY_T0001285;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001285;transcript_name=HG002_chrY_T0001285;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001285:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15528470	15528958	.	+	.	source_transcript=ENST00000471252.1;source_transcript_name=NLGN4Y-206;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471252.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000471252.1,ENST00000471252.1;transcript_id=HG002_chrY_T0001285;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001285;transcript_name=HG002_chrY_T0001285;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001285:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	15429199	15752029	100	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG002_chrY_T0001286;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_G0000424;transcript_name=HG002_chrY_T0001286;gene_name=NLGN4Y;ID=HG002_chrY_T0001286;Name=NLGN4Y
HG002_chrY	CAT	exon	15429199	15429388	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG002_chrY_T0001286;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001286;transcript_name=HG002_chrY_T0001286;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001286:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15429389	15625930	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG002_chrY_T0001286;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001286;transcript_name=HG002_chrY_T0001286;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001286:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15625931	15625990	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG002_chrY_T0001286;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001286;transcript_name=HG002_chrY_T0001286;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001286:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15625991	15629567	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG002_chrY_T0001286;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001286;transcript_name=HG002_chrY_T0001286;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001286:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15629568	15629720	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG002_chrY_T0001286;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001286;transcript_name=HG002_chrY_T0001286;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001286:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15629600	15629720	.	+	0	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG002_chrY_T0001286;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001286;transcript_name=HG002_chrY_T0001286;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001286:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	15629600	15629602	.	+	0	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG002_chrY_T0001286;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001286;transcript_name=HG002_chrY_T0001286;gene_name=NLGN4Y;ID=start_codon:HG002_chrY_T0001286;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15629721	15730592	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG002_chrY_T0001286;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001286;transcript_name=HG002_chrY_T0001286;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001286:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15730593	15730778	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG002_chrY_T0001286;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001286;transcript_name=HG002_chrY_T0001286;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001286:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15730593	15730778	.	+	2	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG002_chrY_T0001286;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001286;transcript_name=HG002_chrY_T0001286;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001286:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15730779	15736108	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG002_chrY_T0001286;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001286;transcript_name=HG002_chrY_T0001286;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001286:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15736109	15736898	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG002_chrY_T0001286;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001286;transcript_name=HG002_chrY_T0001286;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001286:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15736109	15736898	.	+	2	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG002_chrY_T0001286;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001286;transcript_name=HG002_chrY_T0001286;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001286:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15736899	15746791	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG002_chrY_T0001286;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001286;transcript_name=HG002_chrY_T0001286;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001286:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15746792	15752029	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG002_chrY_T0001286;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001286;transcript_name=HG002_chrY_T0001286;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001286:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15746792	15747641	.	+	1	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG002_chrY_T0001286;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001286;transcript_name=HG002_chrY_T0001286;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001286:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	15747639	15747641	.	+	0	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG002_chrY_T0001286;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001286;transcript_name=HG002_chrY_T0001286;gene_name=NLGN4Y;ID=stop_codon:HG002_chrY_T0001286;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	15430193	15750105	100	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG002_chrY_T0001287;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_G0000424;transcript_name=HG002_chrY_T0001287;gene_name=NLGN4Y;ID=HG002_chrY_T0001287;Name=NLGN4Y
HG002_chrY	CAT	exon	15430193	15430345	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG002_chrY_T0001287;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001287;transcript_name=HG002_chrY_T0001287;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001287:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15430346	15528481	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG002_chrY_T0001287;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001287;transcript_name=HG002_chrY_T0001287;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001287:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15528482	15529052	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG002_chrY_T0001287;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001287;transcript_name=HG002_chrY_T0001287;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001287:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15528581	15529052	.	+	0	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG002_chrY_T0001287;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001287;transcript_name=HG002_chrY_T0001287;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001287:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	15528581	15528583	.	+	0	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG002_chrY_T0001287;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001287;transcript_name=HG002_chrY_T0001287;gene_name=NLGN4Y;ID=start_codon:HG002_chrY_T0001287;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15529053	15629567	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG002_chrY_T0001287;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001287;transcript_name=HG002_chrY_T0001287;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001287:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15629568	15629720	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG002_chrY_T0001287;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001287;transcript_name=HG002_chrY_T0001287;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001287:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15629568	15629720	.	+	2	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG002_chrY_T0001287;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001287;transcript_name=HG002_chrY_T0001287;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001287:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15629721	15730592	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG002_chrY_T0001287;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001287;transcript_name=HG002_chrY_T0001287;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001287:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15730593	15730778	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG002_chrY_T0001287;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001287;transcript_name=HG002_chrY_T0001287;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001287:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15730593	15730778	.	+	2	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG002_chrY_T0001287;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001287;transcript_name=HG002_chrY_T0001287;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001287:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15730779	15736108	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG002_chrY_T0001287;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001287;transcript_name=HG002_chrY_T0001287;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001287:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15736109	15736898	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG002_chrY_T0001287;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001287;transcript_name=HG002_chrY_T0001287;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001287:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15736109	15736898	.	+	2	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG002_chrY_T0001287;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001287;transcript_name=HG002_chrY_T0001287;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001287:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15736899	15746791	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG002_chrY_T0001287;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001287;transcript_name=HG002_chrY_T0001287;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001287:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15746792	15750105	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG002_chrY_T0001287;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001287;transcript_name=HG002_chrY_T0001287;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001287:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15746792	15747641	.	+	1	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG002_chrY_T0001287;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001287;transcript_name=HG002_chrY_T0001287;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001287:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	15747639	15747641	.	+	0	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG002_chrY_T0001287;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001287;transcript_name=HG002_chrY_T0001287;gene_name=NLGN4Y;ID=stop_codon:HG002_chrY_T0001287;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	15430193	15750105	100	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG002_chrY_T0001288;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_G0000424;transcript_name=HG002_chrY_T0001288;gene_name=NLGN4Y;ID=HG002_chrY_T0001288;Name=NLGN4Y
HG002_chrY	CAT	exon	15430193	15430345	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG002_chrY_T0001288;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001288;transcript_name=HG002_chrY_T0001288;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001288:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15430346	15528481	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG002_chrY_T0001288;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001288;transcript_name=HG002_chrY_T0001288;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001288:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15528482	15529052	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG002_chrY_T0001288;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001288;transcript_name=HG002_chrY_T0001288;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001288:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15528581	15529052	.	+	0	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG002_chrY_T0001288;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001288;transcript_name=HG002_chrY_T0001288;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001288:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	15528581	15528583	.	+	0	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG002_chrY_T0001288;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001288;transcript_name=HG002_chrY_T0001288;gene_name=NLGN4Y;ID=start_codon:HG002_chrY_T0001288;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15529053	15625930	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG002_chrY_T0001288;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001288;transcript_name=HG002_chrY_T0001288;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001288:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15625931	15625990	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG002_chrY_T0001288;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001288;transcript_name=HG002_chrY_T0001288;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001288:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15625931	15625990	.	+	2	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG002_chrY_T0001288;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001288;transcript_name=HG002_chrY_T0001288;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001288:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15625991	15629567	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG002_chrY_T0001288;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001288;transcript_name=HG002_chrY_T0001288;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001288:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15629568	15629720	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG002_chrY_T0001288;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001288;transcript_name=HG002_chrY_T0001288;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001288:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15629568	15629720	.	+	2	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG002_chrY_T0001288;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001288;transcript_name=HG002_chrY_T0001288;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001288:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15629721	15655071	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG002_chrY_T0001288;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001288;transcript_name=HG002_chrY_T0001288;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001288:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15655072	15655182	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG002_chrY_T0001288;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001288;transcript_name=HG002_chrY_T0001288;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001288:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15655072	15655182	.	+	2	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG002_chrY_T0001288;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001288;transcript_name=HG002_chrY_T0001288;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001288:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15655183	15730592	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG002_chrY_T0001288;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001288;transcript_name=HG002_chrY_T0001288;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001288:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15730593	15730778	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG002_chrY_T0001288;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001288;transcript_name=HG002_chrY_T0001288;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001288:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15730593	15730778	.	+	2	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG002_chrY_T0001288;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001288;transcript_name=HG002_chrY_T0001288;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001288:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15730779	15736108	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG002_chrY_T0001288;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001288;transcript_name=HG002_chrY_T0001288;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001288:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15736109	15736898	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG002_chrY_T0001288;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001288;transcript_name=HG002_chrY_T0001288;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001288:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15736109	15736898	.	+	2	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG002_chrY_T0001288;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001288;transcript_name=HG002_chrY_T0001288;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001288:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15736899	15746791	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG002_chrY_T0001288;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001288;transcript_name=HG002_chrY_T0001288;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001288:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15746792	15750105	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG002_chrY_T0001288;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001288;transcript_name=HG002_chrY_T0001288;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001288:7;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15746792	15747641	.	+	1	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG002_chrY_T0001288;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001288;transcript_name=HG002_chrY_T0001288;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001288:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	15747639	15747641	.	+	0	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG002_chrY_T0001288;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001288;transcript_name=HG002_chrY_T0001288;gene_name=NLGN4Y;ID=stop_codon:HG002_chrY_T0001288;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	15430193	15750105	1000	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG002_chrY_T0001289;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_G0000424;transcript_name=HG002_chrY_T0001289;gene_name=NLGN4Y;ID=HG002_chrY_T0001289;Name=NLGN4Y
HG002_chrY	CAT	exon	15430193	15430345	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG002_chrY_T0001289;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001289;transcript_name=HG002_chrY_T0001289;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001289:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15430346	15528481	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG002_chrY_T0001289;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001289;transcript_name=HG002_chrY_T0001289;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001289:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15528482	15529052	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG002_chrY_T0001289;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001289;transcript_name=HG002_chrY_T0001289;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001289:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15529053	15625930	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG002_chrY_T0001289;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001289;transcript_name=HG002_chrY_T0001289;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001289:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15625931	15625990	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG002_chrY_T0001289;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001289;transcript_name=HG002_chrY_T0001289;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001289:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15625991	15629567	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG002_chrY_T0001289;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001289;transcript_name=HG002_chrY_T0001289;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001289:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15629568	15629720	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG002_chrY_T0001289;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001289;transcript_name=HG002_chrY_T0001289;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001289:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15629721	15655071	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG002_chrY_T0001289;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001289;transcript_name=HG002_chrY_T0001289;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001289:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15655072	15655182	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG002_chrY_T0001289;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001289;transcript_name=HG002_chrY_T0001289;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001289:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15655183	15658129	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG002_chrY_T0001289;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001289;transcript_name=HG002_chrY_T0001289;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001289:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15658130	15658251	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG002_chrY_T0001289;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001289;transcript_name=HG002_chrY_T0001289;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001289:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15658252	15730592	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG002_chrY_T0001289;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001289;transcript_name=HG002_chrY_T0001289;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001289:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15730593	15730778	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG002_chrY_T0001289;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001289;transcript_name=HG002_chrY_T0001289;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001289:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15730779	15736108	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG002_chrY_T0001289;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001289;transcript_name=HG002_chrY_T0001289;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001289:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15736109	15736898	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG002_chrY_T0001289;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001289;transcript_name=HG002_chrY_T0001289;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001289:7;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15736899	15746791	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG002_chrY_T0001289;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001289;transcript_name=HG002_chrY_T0001289;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001289:7;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15746792	15750105	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG002_chrY_T0001289;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001289;transcript_name=HG002_chrY_T0001289;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001289:8;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	15430414	15528681	100	+	.	source_transcript=ENST00000645399.1;source_transcript_name=NLGN4Y-210;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000645399.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645399.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000645399.1,ENST00000645399.1;transcript_id=HG002_chrY_T0001290;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_G0000424;transcript_name=HG002_chrY_T0001290;gene_name=NLGN4Y;ID=HG002_chrY_T0001290;Name=NLGN4Y
HG002_chrY	CAT	exon	15430414	15430731	.	+	.	source_transcript=ENST00000645399.1;source_transcript_name=NLGN4Y-210;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000645399.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645399.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000645399.1,ENST00000645399.1;transcript_id=HG002_chrY_T0001290;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001290;transcript_name=HG002_chrY_T0001290;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001290:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15430732	15528469	.	+	.	source_transcript=ENST00000645399.1;source_transcript_name=NLGN4Y-210;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000645399.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645399.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000645399.1,ENST00000645399.1;transcript_id=HG002_chrY_T0001290;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001290;transcript_name=HG002_chrY_T0001290;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001290:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15528470	15528681	.	+	.	source_transcript=ENST00000645399.1;source_transcript_name=NLGN4Y-210;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000645399.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645399.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000645399.1,ENST00000645399.1;transcript_id=HG002_chrY_T0001290;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001290;transcript_name=HG002_chrY_T0001290;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001290:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15528581	15528681	.	+	0	source_transcript=ENST00000645399.1;source_transcript_name=NLGN4Y-210;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000645399.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645399.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000645399.1,ENST00000645399.1;transcript_id=HG002_chrY_T0001290;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001290;transcript_name=HG002_chrY_T0001290;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001290:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	15528581	15528583	.	+	0	source_transcript=ENST00000645399.1;source_transcript_name=NLGN4Y-210;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000645399.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645399.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000645399.1,ENST00000645399.1;transcript_id=HG002_chrY_T0001290;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001290;transcript_name=HG002_chrY_T0001290;gene_name=NLGN4Y;ID=start_codon:HG002_chrY_T0001290;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	15430976	15752033	100	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG002_chrY_T0001291;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_G0000424;transcript_name=HG002_chrY_T0001291;gene_name=NLGN4Y;ID=HG002_chrY_T0001291;Name=NLGN4Y
HG002_chrY	CAT	exon	15430976	15431155	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG002_chrY_T0001291;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001291;transcript_name=HG002_chrY_T0001291;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001291:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15431156	15528469	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG002_chrY_T0001291;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001291;transcript_name=HG002_chrY_T0001291;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001291:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15528470	15529052	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG002_chrY_T0001291;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001291;transcript_name=HG002_chrY_T0001291;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001291:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15528581	15529052	.	+	0	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG002_chrY_T0001291;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001291;transcript_name=HG002_chrY_T0001291;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001291:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	15528581	15528583	.	+	0	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG002_chrY_T0001291;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001291;transcript_name=HG002_chrY_T0001291;gene_name=NLGN4Y;ID=start_codon:HG002_chrY_T0001291;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15529053	15625930	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG002_chrY_T0001291;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001291;transcript_name=HG002_chrY_T0001291;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001291:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15625931	15625990	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG002_chrY_T0001291;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001291;transcript_name=HG002_chrY_T0001291;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001291:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15625931	15625990	.	+	2	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG002_chrY_T0001291;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001291;transcript_name=HG002_chrY_T0001291;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001291:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15625991	15629567	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG002_chrY_T0001291;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001291;transcript_name=HG002_chrY_T0001291;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001291:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15629568	15629720	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG002_chrY_T0001291;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001291;transcript_name=HG002_chrY_T0001291;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001291:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15629568	15629720	.	+	2	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG002_chrY_T0001291;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001291;transcript_name=HG002_chrY_T0001291;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001291:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15629721	15730592	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG002_chrY_T0001291;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001291;transcript_name=HG002_chrY_T0001291;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001291:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15730593	15730778	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG002_chrY_T0001291;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001291;transcript_name=HG002_chrY_T0001291;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001291:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15730593	15730778	.	+	2	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG002_chrY_T0001291;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001291;transcript_name=HG002_chrY_T0001291;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001291:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15730779	15736108	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG002_chrY_T0001291;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001291;transcript_name=HG002_chrY_T0001291;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001291:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15736109	15736898	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG002_chrY_T0001291;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001291;transcript_name=HG002_chrY_T0001291;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001291:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15736109	15736898	.	+	2	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG002_chrY_T0001291;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001291;transcript_name=HG002_chrY_T0001291;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001291:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15736899	15746791	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG002_chrY_T0001291;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001291;transcript_name=HG002_chrY_T0001291;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001291:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15746792	15752033	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG002_chrY_T0001291;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001291;transcript_name=HG002_chrY_T0001291;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001291:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15746792	15747641	.	+	1	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG002_chrY_T0001291;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001291;transcript_name=HG002_chrY_T0001291;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001291:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	15747639	15747641	.	+	0	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG002_chrY_T0001291;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001291;transcript_name=HG002_chrY_T0001291;gene_name=NLGN4Y;ID=stop_codon:HG002_chrY_T0001291;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	15430976	15528829	1000	+	.	source_transcript=ENST00000481089.1;source_transcript_name=NLGN4Y-208;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481089.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000481089.1,ENST00000481089.1;transcript_id=HG002_chrY_T0001292;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_G0000424;transcript_name=HG002_chrY_T0001292;gene_name=NLGN4Y;ID=HG002_chrY_T0001292;Name=NLGN4Y
HG002_chrY	CAT	exon	15430976	15431155	.	+	.	source_transcript=ENST00000481089.1;source_transcript_name=NLGN4Y-208;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481089.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000481089.1,ENST00000481089.1;transcript_id=HG002_chrY_T0001292;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001292;transcript_name=HG002_chrY_T0001292;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001292:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15431156	15528469	.	+	.	source_transcript=ENST00000481089.1;source_transcript_name=NLGN4Y-208;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481089.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000481089.1,ENST00000481089.1;transcript_id=HG002_chrY_T0001292;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001292;transcript_name=HG002_chrY_T0001292;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001292:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15528470	15528829	.	+	.	source_transcript=ENST00000481089.1;source_transcript_name=NLGN4Y-208;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481089.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000481089.1,ENST00000481089.1;transcript_id=HG002_chrY_T0001292;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001292;transcript_name=HG002_chrY_T0001292;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001292:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	15431021	15750026	100	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG002_chrY_T0001293;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_G0000424;transcript_name=HG002_chrY_T0001293;gene_name=NLGN4Y;ID=HG002_chrY_T0001293;Name=NLGN4Y
HG002_chrY	CAT	exon	15431021	15431383	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG002_chrY_T0001293;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001293;transcript_name=HG002_chrY_T0001293;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001293:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15431384	15528469	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG002_chrY_T0001293;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001293;transcript_name=HG002_chrY_T0001293;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001293:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15528470	15529052	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG002_chrY_T0001293;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001293;transcript_name=HG002_chrY_T0001293;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001293:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15528581	15529052	.	+	0	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG002_chrY_T0001293;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001293;transcript_name=HG002_chrY_T0001293;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001293:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	15528581	15528583	.	+	0	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG002_chrY_T0001293;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001293;transcript_name=HG002_chrY_T0001293;gene_name=NLGN4Y;ID=start_codon:HG002_chrY_T0001293;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15529053	15629567	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG002_chrY_T0001293;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001293;transcript_name=HG002_chrY_T0001293;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001293:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15629568	15629720	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG002_chrY_T0001293;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001293;transcript_name=HG002_chrY_T0001293;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001293:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15629568	15629720	.	+	2	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG002_chrY_T0001293;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001293;transcript_name=HG002_chrY_T0001293;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001293:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15629721	15730592	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG002_chrY_T0001293;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001293;transcript_name=HG002_chrY_T0001293;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001293:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15730593	15730778	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG002_chrY_T0001293;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001293;transcript_name=HG002_chrY_T0001293;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001293:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15730593	15730778	.	+	2	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG002_chrY_T0001293;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001293;transcript_name=HG002_chrY_T0001293;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001293:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15730779	15736108	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG002_chrY_T0001293;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001293;transcript_name=HG002_chrY_T0001293;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001293:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15736109	15736898	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG002_chrY_T0001293;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001293;transcript_name=HG002_chrY_T0001293;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001293:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15736109	15736898	.	+	2	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG002_chrY_T0001293;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001293;transcript_name=HG002_chrY_T0001293;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001293:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15736899	15746791	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG002_chrY_T0001293;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001293;transcript_name=HG002_chrY_T0001293;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001293:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15746792	15750026	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG002_chrY_T0001293;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001293;transcript_name=HG002_chrY_T0001293;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001293:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15746792	15747641	.	+	1	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG002_chrY_T0001293;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001293;transcript_name=HG002_chrY_T0001293;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001293:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	15747639	15747641	.	+	0	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG002_chrY_T0001293;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001293;transcript_name=HG002_chrY_T0001293;gene_name=NLGN4Y;ID=stop_codon:HG002_chrY_T0001293;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	15528642	15640002	100	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG002_chrY_T0001294;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_G0000424;transcript_name=HG002_chrY_T0001294;gene_name=NLGN4Y;ID=HG002_chrY_T0001294;Name=NLGN4Y
HG002_chrY	CAT	exon	15528642	15529052	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG002_chrY_T0001294;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001294;transcript_name=HG002_chrY_T0001294;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001294:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15528642	15529052	.	+	2	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG002_chrY_T0001294;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001294;transcript_name=HG002_chrY_T0001294;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001294:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15529053	15625930	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG002_chrY_T0001294;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001294;transcript_name=HG002_chrY_T0001294;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001294:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15625931	15625990	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG002_chrY_T0001294;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001294;transcript_name=HG002_chrY_T0001294;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001294:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15625931	15625990	.	+	2	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG002_chrY_T0001294;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001294;transcript_name=HG002_chrY_T0001294;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001294:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15625991	15629567	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG002_chrY_T0001294;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001294;transcript_name=HG002_chrY_T0001294;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001294:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15629568	15629720	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG002_chrY_T0001294;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001294;transcript_name=HG002_chrY_T0001294;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001294:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15629568	15629720	.	+	2	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG002_chrY_T0001294;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001294;transcript_name=HG002_chrY_T0001294;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001294:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15629721	15639904	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG002_chrY_T0001294;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001294;transcript_name=HG002_chrY_T0001294;gene_name=NLGN4Y;ID=intron:HG002_chrY_T0001294:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15639905	15640002	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG002_chrY_T0001294;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001294;transcript_name=HG002_chrY_T0001294;gene_name=NLGN4Y;ID=exon:HG002_chrY_T0001294:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	15639905	15639990	.	+	2	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG002_chrY_T0001294;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001294;transcript_name=HG002_chrY_T0001294;gene_name=NLGN4Y;ID=CDS:HG002_chrY_T0001294:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	15639988	15639990	.	+	0	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG002_chrY_T0001294;gene_id=HG002_chrY_G0000424;Parent=HG002_chrY_T0001294;transcript_name=HG002_chrY_T0001294;gene_name=NLGN4Y;ID=stop_codon:HG002_chrY_T0001294;Name=NLGN4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	15545556	15546818	.	+	.	source_gene_common_name=AGKP1;source_gene=ENSG00000226555.1;alternative_source_transcripts=ENST00000455254.1,ENST00000455254.1;gene_id=HG002_chrY_G0000425;gene_biotype=processed_pseudogene;gene_name=AGKP1;gene_sources=liftoff;ID=HG002_chrY_G0000425;Name=AGKP1
HG002_chrY	CAT	transcript	15545556	15546818	1000	+	.	source_transcript=ENST00000455254.1;source_transcript_name=AGKP1-201;source_gene=ENSG00000226555.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226555.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000455254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455254.1;transcript_score=199.921;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AGKP1;alternative_source_transcripts=ENST00000455254.1,ENST00000455254.1;transcript_id=HG002_chrY_T0001295;gene_id=HG002_chrY_G0000425;Parent=HG002_chrY_G0000425;transcript_name=HG002_chrY_T0001295;gene_name=AGKP1;ID=HG002_chrY_T0001295;Name=AGKP1
HG002_chrY	CAT	exon	15545556	15546818	.	+	.	source_transcript=ENST00000455254.1;source_transcript_name=AGKP1-201;source_gene=ENSG00000226555.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226555.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000455254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455254.1;transcript_score=199.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AGKP1;alternative_source_transcripts=ENST00000455254.1,ENST00000455254.1;transcript_id=HG002_chrY_T0001295;gene_id=HG002_chrY_G0000425;Parent=HG002_chrY_T0001295;transcript_name=HG002_chrY_T0001295;gene_name=AGKP1;ID=exon:HG002_chrY_T0001295:0;Name=AGKP1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	15700088	15710438	.	-	.	source_gene_common_name=NLGN4Y-AS1;source_gene=ENSG00000228787.1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;gene_id=HG002_chrY_G0000426;gene_biotype=lncRNA;gene_name=NLGN4Y-AS1;gene_sources=liftoff;ID=HG002_chrY_G0000426;Name=NLGN4Y-AS1
HG002_chrY	CAT	transcript	15700088	15710438	1000	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=HG002_chrY_T0001296;gene_id=HG002_chrY_G0000426;Parent=HG002_chrY_G0000426;transcript_name=HG002_chrY_T0001296;gene_name=NLGN4Y-AS1;ID=HG002_chrY_T0001296;Name=NLGN4Y-AS1
HG002_chrY	CAT	exon	15700088	15700433	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=HG002_chrY_T0001296;gene_id=HG002_chrY_G0000426;Parent=HG002_chrY_T0001296;transcript_name=HG002_chrY_T0001296;gene_name=NLGN4Y-AS1;ID=exon:HG002_chrY_T0001296:0;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15700434	15705069	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=HG002_chrY_T0001296;gene_id=HG002_chrY_G0000426;Parent=HG002_chrY_T0001296;transcript_name=HG002_chrY_T0001296;gene_name=NLGN4Y-AS1;ID=intron:HG002_chrY_T0001296:0;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15705070	15705157	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=HG002_chrY_T0001296;gene_id=HG002_chrY_G0000426;Parent=HG002_chrY_T0001296;transcript_name=HG002_chrY_T0001296;gene_name=NLGN4Y-AS1;ID=exon:HG002_chrY_T0001296:1;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15705158	15707723	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=HG002_chrY_T0001296;gene_id=HG002_chrY_G0000426;Parent=HG002_chrY_T0001296;transcript_name=HG002_chrY_T0001296;gene_name=NLGN4Y-AS1;ID=intron:HG002_chrY_T0001296:1;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15707724	15707792	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=HG002_chrY_T0001296;gene_id=HG002_chrY_G0000426;Parent=HG002_chrY_T0001296;transcript_name=HG002_chrY_T0001296;gene_name=NLGN4Y-AS1;ID=exon:HG002_chrY_T0001296:2;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15707793	15710409	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=HG002_chrY_T0001296;gene_id=HG002_chrY_G0000426;Parent=HG002_chrY_T0001296;transcript_name=HG002_chrY_T0001296;gene_name=NLGN4Y-AS1;ID=intron:HG002_chrY_T0001296:2;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15710410	15710438	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=HG002_chrY_T0001296;gene_id=HG002_chrY_G0000426;Parent=HG002_chrY_T0001296;transcript_name=HG002_chrY_T0001296;gene_name=NLGN4Y-AS1;ID=exon:HG002_chrY_T0001296:3;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	15814275	15814445	.	+	.	source_gene_common_name=MED13P1;source_gene=ENSG00000236131.1;alternative_source_transcripts=ENST00000428342.1,ENST00000428342.1;gene_id=HG002_chrY_G0000427;gene_biotype=processed_pseudogene;gene_name=MED13P1;gene_sources=liftoff;ID=HG002_chrY_G0000427;Name=MED13P1
HG002_chrY	CAT	transcript	15814275	15814445	1000	+	.	source_transcript=ENST00000428342.1;source_transcript_name=MED13P1-201;source_gene=ENSG00000236131.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236131.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428342.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428342.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED13P1;alternative_source_transcripts=ENST00000428342.1,ENST00000428342.1;transcript_id=HG002_chrY_T0001297;gene_id=HG002_chrY_G0000427;Parent=HG002_chrY_G0000427;transcript_name=HG002_chrY_T0001297;gene_name=MED13P1;ID=HG002_chrY_T0001297;Name=MED13P1
HG002_chrY	CAT	exon	15814275	15814445	.	+	.	source_transcript=ENST00000428342.1;source_transcript_name=MED13P1-201;source_gene=ENSG00000236131.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236131.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428342.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428342.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED13P1;alternative_source_transcripts=ENST00000428342.1,ENST00000428342.1;transcript_id=HG002_chrY_T0001297;gene_id=HG002_chrY_G0000427;Parent=HG002_chrY_T0001297;transcript_name=HG002_chrY_T0001297;gene_name=MED13P1;ID=exon:HG002_chrY_T0001297:0;Name=MED13P1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	15832074	15833226	.	-	.	source_gene_common_name=ENSG00000304558;source_gene=ENSG00000304558.1;alternative_source_transcripts=ENST00000804523.1,ENST00000804523.1;gene_id=HG002_chrY_G0000428;gene_biotype=lncRNA;gene_name=ENSG00000304558;gene_sources=liftoff;ID=HG002_chrY_G0000428;Name=ENSG00000304558
HG002_chrY	CAT	transcript	15832074	15833226	1000	-	.	source_transcript=ENST00000804523.1;source_transcript_name=ENST00000804523;source_gene=ENSG00000304558.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304558.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000804523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000804523.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304558;alternative_source_transcripts=ENST00000804523.1,ENST00000804523.1;transcript_id=HG002_chrY_T0001298;gene_id=HG002_chrY_G0000428;Parent=HG002_chrY_G0000428;transcript_name=HG002_chrY_T0001298;gene_name=ENSG00000304558;ID=HG002_chrY_T0001298;Name=ENSG00000304558
HG002_chrY	CAT	exon	15832074	15832952	.	-	.	source_transcript=ENST00000804523.1;source_transcript_name=ENST00000804523;source_gene=ENSG00000304558.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304558.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000804523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000804523.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304558;alternative_source_transcripts=ENST00000804523.1,ENST00000804523.1;transcript_id=HG002_chrY_T0001298;gene_id=HG002_chrY_G0000428;Parent=HG002_chrY_T0001298;transcript_name=HG002_chrY_T0001298;gene_name=ENSG00000304558;ID=exon:HG002_chrY_T0001298:0;Name=ENSG00000304558;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15832953	15833108	.	-	.	source_transcript=ENST00000804523.1;source_transcript_name=ENST00000804523;source_gene=ENSG00000304558.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304558.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000804523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000804523.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304558;alternative_source_transcripts=ENST00000804523.1,ENST00000804523.1;transcript_id=HG002_chrY_T0001298;gene_id=HG002_chrY_G0000428;Parent=HG002_chrY_T0001298;transcript_name=HG002_chrY_T0001298;gene_name=ENSG00000304558;ID=intron:HG002_chrY_T0001298:0;Name=ENSG00000304558;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15833109	15833226	.	-	.	source_transcript=ENST00000804523.1;source_transcript_name=ENST00000804523;source_gene=ENSG00000304558.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304558.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000804523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000804523.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304558;alternative_source_transcripts=ENST00000804523.1,ENST00000804523.1;transcript_id=HG002_chrY_T0001298;gene_id=HG002_chrY_G0000428;Parent=HG002_chrY_T0001298;transcript_name=HG002_chrY_T0001298;gene_name=ENSG00000304558;ID=exon:HG002_chrY_T0001298:1;Name=ENSG00000304558;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	15847924	15848127	.	-	.	source_gene_common_name=CYCSP46;source_gene=ENSG00000227949.1;alternative_source_transcripts=ENST00000423569.1,ENST00000423569.1;gene_id=HG002_chrY_G0000429;gene_biotype=processed_pseudogene;gene_name=CYCSP46;gene_sources=liftoff;ID=HG002_chrY_G0000429;Name=CYCSP46
HG002_chrY	CAT	transcript	15847924	15848127	1000	-	.	source_transcript=ENST00000423569.1;source_transcript_name=CYCSP46-201;source_gene=ENSG00000227949.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227949.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000423569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423569.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP46;alternative_source_transcripts=ENST00000423569.1,ENST00000423569.1;transcript_id=HG002_chrY_T0001299;gene_id=HG002_chrY_G0000429;Parent=HG002_chrY_G0000429;transcript_name=HG002_chrY_T0001299;gene_name=CYCSP46;ID=HG002_chrY_T0001299;Name=CYCSP46
HG002_chrY	CAT	exon	15847924	15848127	.	-	.	source_transcript=ENST00000423569.1;source_transcript_name=CYCSP46-201;source_gene=ENSG00000227949.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227949.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000423569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423569.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP46;alternative_source_transcripts=ENST00000423569.1,ENST00000423569.1;transcript_id=HG002_chrY_T0001299;gene_id=HG002_chrY_G0000429;Parent=HG002_chrY_T0001299;transcript_name=HG002_chrY_T0001299;gene_name=CYCSP46;ID=exon:HG002_chrY_T0001299:0;Name=CYCSP46;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	15848123	15849092	.	+	.	source_gene_common_name=ENSG00000224518;source_gene=ENSG00000224518.2;alternative_source_transcripts=ENST00000427212.2,ENST00000427212.2;gene_id=HG002_chrY_G0000430;gene_biotype=processed_pseudogene;gene_name=ENSG00000224518;gene_sources=liftoff;ID=HG002_chrY_G0000430;Name=ENSG00000224518
HG002_chrY	CAT	transcript	15848123	15849092	1000	+	.	source_transcript=ENST00000427212.2;source_transcript_name=ENST00000427212;source_gene=ENSG00000224518.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224518.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000427212.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000427212.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224518;alternative_source_transcripts=ENST00000427212.2,ENST00000427212.2;transcript_id=HG002_chrY_T0001300;gene_id=HG002_chrY_G0000430;Parent=HG002_chrY_G0000430;transcript_name=HG002_chrY_T0001300;gene_name=ENSG00000224518;ID=HG002_chrY_T0001300;Name=ENSG00000224518
HG002_chrY	CAT	exon	15848123	15848198	.	+	.	source_transcript=ENST00000427212.2;source_transcript_name=ENST00000427212;source_gene=ENSG00000224518.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224518.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000427212.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000427212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224518;alternative_source_transcripts=ENST00000427212.2,ENST00000427212.2;transcript_id=HG002_chrY_T0001300;gene_id=HG002_chrY_G0000430;Parent=HG002_chrY_T0001300;transcript_name=HG002_chrY_T0001300;gene_name=ENSG00000224518;ID=exon:HG002_chrY_T0001300:0;Name=ENSG00000224518;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	15848199	15849037	.	+	.	source_transcript=ENST00000427212.2;source_transcript_name=ENST00000427212;source_gene=ENSG00000224518.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224518.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000427212.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000427212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224518;alternative_source_transcripts=ENST00000427212.2,ENST00000427212.2;transcript_id=HG002_chrY_T0001300;gene_id=HG002_chrY_G0000430;Parent=HG002_chrY_T0001300;transcript_name=HG002_chrY_T0001300;gene_name=ENSG00000224518;ID=intron:HG002_chrY_T0001300:0;Name=ENSG00000224518;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	15849038	15849092	.	+	.	source_transcript=ENST00000427212.2;source_transcript_name=ENST00000427212;source_gene=ENSG00000224518.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224518.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000427212.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000427212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224518;alternative_source_transcripts=ENST00000427212.2,ENST00000427212.2;transcript_id=HG002_chrY_T0001300;gene_id=HG002_chrY_G0000430;Parent=HG002_chrY_T0001300;transcript_name=HG002_chrY_T0001300;gene_name=ENSG00000224518;ID=exon:HG002_chrY_T0001300:1;Name=ENSG00000224518;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	16254995	16362402	.	-	.	source_gene_common_name=PUDPP1;source_gene=ENSG00000234620.1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;gene_id=HG002_chrY_G0000431;gene_biotype=unprocessed_pseudogene;gene_name=PUDPP1;gene_sources=liftoff;ID=HG002_chrY_G0000431;Name=PUDPP1
HG002_chrY	CAT	transcript	16254995	16362402	1000	-	.	source_transcript=ENST00000421058.1;source_transcript_name=PUDPP1-201;source_gene=ENSG00000234620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421058.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421058.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PUDPP1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;transcript_id=HG002_chrY_T0001301;gene_id=HG002_chrY_G0000431;Parent=HG002_chrY_G0000431;transcript_name=HG002_chrY_T0001301;gene_name=PUDPP1;ID=HG002_chrY_T0001301;Name=PUDPP1
HG002_chrY	CAT	exon	16254995	16255199	.	-	.	source_transcript=ENST00000421058.1;source_transcript_name=PUDPP1-201;source_gene=ENSG00000234620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421058.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421058.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PUDPP1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;transcript_id=HG002_chrY_T0001301;gene_id=HG002_chrY_G0000431;Parent=HG002_chrY_T0001301;transcript_name=HG002_chrY_T0001301;gene_name=PUDPP1;ID=exon:HG002_chrY_T0001301:0;Name=PUDPP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	16255200	16287923	.	-	.	source_transcript=ENST00000421058.1;source_transcript_name=PUDPP1-201;source_gene=ENSG00000234620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421058.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421058.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PUDPP1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;transcript_id=HG002_chrY_T0001301;gene_id=HG002_chrY_G0000431;Parent=HG002_chrY_T0001301;transcript_name=HG002_chrY_T0001301;gene_name=PUDPP1;ID=intron:HG002_chrY_T0001301:0;Name=PUDPP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	16287924	16288173	.	-	.	source_transcript=ENST00000421058.1;source_transcript_name=PUDPP1-201;source_gene=ENSG00000234620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421058.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421058.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PUDPP1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;transcript_id=HG002_chrY_T0001301;gene_id=HG002_chrY_G0000431;Parent=HG002_chrY_T0001301;transcript_name=HG002_chrY_T0001301;gene_name=PUDPP1;ID=exon:HG002_chrY_T0001301:1;Name=PUDPP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	16288174	16362362	.	-	.	source_transcript=ENST00000421058.1;source_transcript_name=PUDPP1-201;source_gene=ENSG00000234620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421058.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421058.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PUDPP1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;transcript_id=HG002_chrY_T0001301;gene_id=HG002_chrY_G0000431;Parent=HG002_chrY_T0001301;transcript_name=HG002_chrY_T0001301;gene_name=PUDPP1;ID=intron:HG002_chrY_T0001301:1;Name=PUDPP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	16362363	16362402	.	-	.	source_transcript=ENST00000421058.1;source_transcript_name=PUDPP1-201;source_gene=ENSG00000234620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421058.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421058.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PUDPP1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;transcript_id=HG002_chrY_T0001301;gene_id=HG002_chrY_G0000431;Parent=HG002_chrY_T0001301;transcript_name=HG002_chrY_T0001301;gene_name=PUDPP1;ID=exon:HG002_chrY_T0001301:2;Name=PUDPP1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	16362335	16475473	.	+	.	source_gene_common_name=ENSG00000295583;source_gene=ENSG00000295583.1;gene_id=HG002_chrY_G0000432;gene_biotype=lncRNA;gene_name=ENSG00000295583;gene_sources=liftoff;ID=HG002_chrY_G0000432;Name=ENSG00000295583
HG002_chrY	CAT	transcript	16362335	16473465	1000	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001302;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_G0000432;transcript_name=HG002_chrY_T0001302;gene_name=ENSG00000295583;ID=HG002_chrY_T0001302;Name=ENSG00000295583
HG002_chrY	CAT	exon	16362335	16362396	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001302;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001302;transcript_name=HG002_chrY_T0001302;gene_name=ENSG00000295583;ID=exon:HG002_chrY_T0001302:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	16362397	16366620	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001302;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001302;transcript_name=HG002_chrY_T0001302;gene_name=ENSG00000295583;ID=intron:HG002_chrY_T0001302:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	16366621	16366702	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001302;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001302;transcript_name=HG002_chrY_T0001302;gene_name=ENSG00000295583;ID=exon:HG002_chrY_T0001302:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	16366703	16453546	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001302;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001302;transcript_name=HG002_chrY_T0001302;gene_name=ENSG00000295583;ID=intron:HG002_chrY_T0001302:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	16453547	16453687	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001302;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001302;transcript_name=HG002_chrY_T0001302;gene_name=ENSG00000295583;ID=exon:HG002_chrY_T0001302:2;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	16453688	16455939	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001302;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001302;transcript_name=HG002_chrY_T0001302;gene_name=ENSG00000295583;ID=intron:HG002_chrY_T0001302:2;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	16455940	16456061	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001302;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001302;transcript_name=HG002_chrY_T0001302;gene_name=ENSG00000295583;ID=exon:HG002_chrY_T0001302:3;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	16456062	16473095	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001302;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001302;transcript_name=HG002_chrY_T0001302;gene_name=ENSG00000295583;ID=intron:HG002_chrY_T0001302:3;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	16473096	16473465	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001302;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001302;transcript_name=HG002_chrY_T0001302;gene_name=ENSG00000295583;ID=exon:HG002_chrY_T0001302:4;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	16362341	16475473	1000	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001303;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_G0000432;transcript_name=HG002_chrY_T0001303;gene_name=ENSG00000295583;ID=HG002_chrY_T0001303;Name=ENSG00000295583
HG002_chrY	CAT	exon	16362341	16362396	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001303;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001303;transcript_name=HG002_chrY_T0001303;gene_name=ENSG00000295583;ID=exon:HG002_chrY_T0001303:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	16362397	16366620	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001303;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001303;transcript_name=HG002_chrY_T0001303;gene_name=ENSG00000295583;ID=intron:HG002_chrY_T0001303:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	16366621	16366702	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001303;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001303;transcript_name=HG002_chrY_T0001303;gene_name=ENSG00000295583;ID=exon:HG002_chrY_T0001303:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	16366703	16453546	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001303;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001303;transcript_name=HG002_chrY_T0001303;gene_name=ENSG00000295583;ID=intron:HG002_chrY_T0001303:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	16453547	16453687	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001303;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001303;transcript_name=HG002_chrY_T0001303;gene_name=ENSG00000295583;ID=exon:HG002_chrY_T0001303:2;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	16453688	16455939	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001303;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001303;transcript_name=HG002_chrY_T0001303;gene_name=ENSG00000295583;ID=intron:HG002_chrY_T0001303:2;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	16455940	16456061	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001303;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001303;transcript_name=HG002_chrY_T0001303;gene_name=ENSG00000295583;ID=exon:HG002_chrY_T0001303:3;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	16456062	16473095	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001303;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001303;transcript_name=HG002_chrY_T0001303;gene_name=ENSG00000295583;ID=intron:HG002_chrY_T0001303:3;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	16473096	16473232	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001303;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001303;transcript_name=HG002_chrY_T0001303;gene_name=ENSG00000295583;ID=exon:HG002_chrY_T0001303:4;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	16473233	16475356	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001303;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001303;transcript_name=HG002_chrY_T0001303;gene_name=ENSG00000295583;ID=intron:HG002_chrY_T0001303:4;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	16475357	16475473	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001303;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001303;transcript_name=HG002_chrY_T0001303;gene_name=ENSG00000295583;ID=exon:HG002_chrY_T0001303:5;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	16362360	16368010	1000	+	.	source_transcript=ENST00000731062.1;source_transcript_name=ENST00000731062;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001304;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_G0000432;transcript_name=HG002_chrY_T0001304;gene_name=ENSG00000295583;ID=HG002_chrY_T0001304;Name=ENSG00000295583
HG002_chrY	CAT	exon	16362360	16362396	.	+	.	source_transcript=ENST00000731062.1;source_transcript_name=ENST00000731062;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001304;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001304;transcript_name=HG002_chrY_T0001304;gene_name=ENSG00000295583;ID=exon:HG002_chrY_T0001304:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	16362397	16366620	.	+	.	source_transcript=ENST00000731062.1;source_transcript_name=ENST00000731062;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001304;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001304;transcript_name=HG002_chrY_T0001304;gene_name=ENSG00000295583;ID=intron:HG002_chrY_T0001304:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	16366621	16366702	.	+	.	source_transcript=ENST00000731062.1;source_transcript_name=ENST00000731062;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001304;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001304;transcript_name=HG002_chrY_T0001304;gene_name=ENSG00000295583;ID=exon:HG002_chrY_T0001304:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	16366703	16367025	.	+	.	source_transcript=ENST00000731062.1;source_transcript_name=ENST00000731062;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001304;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001304;transcript_name=HG002_chrY_T0001304;gene_name=ENSG00000295583;ID=intron:HG002_chrY_T0001304:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	16367026	16368010	.	+	.	source_transcript=ENST00000731062.1;source_transcript_name=ENST00000731062;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001304;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001304;transcript_name=HG002_chrY_T0001304;gene_name=ENSG00000295583;ID=exon:HG002_chrY_T0001304:2;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	16362368	16366835	1000	+	.	source_transcript=ENST00000731065.1;source_transcript_name=ENST00000731065;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731065.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001305;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_G0000432;transcript_name=HG002_chrY_T0001305;gene_name=ENSG00000295583;ID=HG002_chrY_T0001305;Name=ENSG00000295583
HG002_chrY	CAT	exon	16362368	16363168	.	+	.	source_transcript=ENST00000731065.1;source_transcript_name=ENST00000731065;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001305;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001305;transcript_name=HG002_chrY_T0001305;gene_name=ENSG00000295583;ID=exon:HG002_chrY_T0001305:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	16363169	16366620	.	+	.	source_transcript=ENST00000731065.1;source_transcript_name=ENST00000731065;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001305;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001305;transcript_name=HG002_chrY_T0001305;gene_name=ENSG00000295583;ID=intron:HG002_chrY_T0001305:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	16366621	16366835	.	+	.	source_transcript=ENST00000731065.1;source_transcript_name=ENST00000731065;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001305;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001305;transcript_name=HG002_chrY_T0001305;gene_name=ENSG00000295583;ID=exon:HG002_chrY_T0001305:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	16362533	16368010	1000	+	.	source_transcript=ENST00000731063.1;source_transcript_name=ENST00000731063;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731063.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731063.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001306;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_G0000432;transcript_name=HG002_chrY_T0001306;gene_name=ENSG00000295583;ID=HG002_chrY_T0001306;Name=ENSG00000295583
HG002_chrY	CAT	exon	16362533	16363168	.	+	.	source_transcript=ENST00000731063.1;source_transcript_name=ENST00000731063;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731063.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731063.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001306;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001306;transcript_name=HG002_chrY_T0001306;gene_name=ENSG00000295583;ID=exon:HG002_chrY_T0001306:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	16363169	16366620	.	+	.	source_transcript=ENST00000731063.1;source_transcript_name=ENST00000731063;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731063.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731063.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001306;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001306;transcript_name=HG002_chrY_T0001306;gene_name=ENSG00000295583;ID=intron:HG002_chrY_T0001306:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	16366621	16366702	.	+	.	source_transcript=ENST00000731063.1;source_transcript_name=ENST00000731063;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731063.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731063.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001306;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001306;transcript_name=HG002_chrY_T0001306;gene_name=ENSG00000295583;ID=exon:HG002_chrY_T0001306:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	16366703	16367025	.	+	.	source_transcript=ENST00000731063.1;source_transcript_name=ENST00000731063;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731063.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731063.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001306;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001306;transcript_name=HG002_chrY_T0001306;gene_name=ENSG00000295583;ID=intron:HG002_chrY_T0001306:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	16367026	16368010	.	+	.	source_transcript=ENST00000731063.1;source_transcript_name=ENST00000731063;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731063.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731063.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001306;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001306;transcript_name=HG002_chrY_T0001306;gene_name=ENSG00000295583;ID=exon:HG002_chrY_T0001306:2;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	16362663	16367162	1000	+	.	source_transcript=ENST00000731064.1;source_transcript_name=ENST00000731064;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731064.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731064.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001307;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_G0000432;transcript_name=HG002_chrY_T0001307;gene_name=ENSG00000295583;ID=HG002_chrY_T0001307;Name=ENSG00000295583
HG002_chrY	CAT	exon	16362663	16362812	.	+	.	source_transcript=ENST00000731064.1;source_transcript_name=ENST00000731064;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731064.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731064.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001307;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001307;transcript_name=HG002_chrY_T0001307;gene_name=ENSG00000295583;ID=exon:HG002_chrY_T0001307:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	16362813	16366620	.	+	.	source_transcript=ENST00000731064.1;source_transcript_name=ENST00000731064;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731064.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731064.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001307;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001307;transcript_name=HG002_chrY_T0001307;gene_name=ENSG00000295583;ID=intron:HG002_chrY_T0001307:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	16366621	16366702	.	+	.	source_transcript=ENST00000731064.1;source_transcript_name=ENST00000731064;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731064.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731064.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001307;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001307;transcript_name=HG002_chrY_T0001307;gene_name=ENSG00000295583;ID=exon:HG002_chrY_T0001307:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	16366703	16367025	.	+	.	source_transcript=ENST00000731064.1;source_transcript_name=ENST00000731064;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731064.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731064.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001307;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001307;transcript_name=HG002_chrY_T0001307;gene_name=ENSG00000295583;ID=intron:HG002_chrY_T0001307:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	16367026	16367162	.	+	.	source_transcript=ENST00000731064.1;source_transcript_name=ENST00000731064;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731064.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731064.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001307;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001307;transcript_name=HG002_chrY_T0001307;gene_name=ENSG00000295583;ID=exon:HG002_chrY_T0001307:2;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	16362663	16363705	1000	+	.	source_transcript=ENST00000731067.1;source_transcript_name=ENST00000731067;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731067.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731067.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001308;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_G0000432;transcript_name=HG002_chrY_T0001308;gene_name=ENSG00000295583;ID=HG002_chrY_T0001308;Name=ENSG00000295583
HG002_chrY	CAT	exon	16362663	16363168	.	+	.	source_transcript=ENST00000731067.1;source_transcript_name=ENST00000731067;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731067.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731067.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001308;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001308;transcript_name=HG002_chrY_T0001308;gene_name=ENSG00000295583;ID=exon:HG002_chrY_T0001308:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	16363169	16363252	.	+	.	source_transcript=ENST00000731067.1;source_transcript_name=ENST00000731067;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731067.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731067.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001308;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001308;transcript_name=HG002_chrY_T0001308;gene_name=ENSG00000295583;ID=intron:HG002_chrY_T0001308:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	16363253	16363705	.	+	.	source_transcript=ENST00000731067.1;source_transcript_name=ENST00000731067;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731067.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731067.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001308;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001308;transcript_name=HG002_chrY_T0001308;gene_name=ENSG00000295583;ID=exon:HG002_chrY_T0001308:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	16362667	16366835	1000	+	.	source_transcript=ENST00000731066.1;source_transcript_name=ENST00000731066;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731066.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001309;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_G0000432;transcript_name=HG002_chrY_T0001309;gene_name=ENSG00000295583;ID=HG002_chrY_T0001309;Name=ENSG00000295583
HG002_chrY	CAT	exon	16362667	16363168	.	+	.	source_transcript=ENST00000731066.1;source_transcript_name=ENST00000731066;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731066.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001309;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001309;transcript_name=HG002_chrY_T0001309;gene_name=ENSG00000295583;ID=exon:HG002_chrY_T0001309:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	16363169	16366290	.	+	.	source_transcript=ENST00000731066.1;source_transcript_name=ENST00000731066;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731066.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001309;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001309;transcript_name=HG002_chrY_T0001309;gene_name=ENSG00000295583;ID=intron:HG002_chrY_T0001309:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	16366291	16366410	.	+	.	source_transcript=ENST00000731066.1;source_transcript_name=ENST00000731066;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731066.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001309;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001309;transcript_name=HG002_chrY_T0001309;gene_name=ENSG00000295583;ID=exon:HG002_chrY_T0001309:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	16366411	16366620	.	+	.	source_transcript=ENST00000731066.1;source_transcript_name=ENST00000731066;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731066.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001309;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001309;transcript_name=HG002_chrY_T0001309;gene_name=ENSG00000295583;ID=intron:HG002_chrY_T0001309:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	16366621	16366835	.	+	.	source_transcript=ENST00000731066.1;source_transcript_name=ENST00000731066;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731066.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG002_chrY_T0001309;gene_id=HG002_chrY_G0000432;Parent=HG002_chrY_T0001309;transcript_name=HG002_chrY_T0001309;gene_name=ENSG00000295583;ID=exon:HG002_chrY_T0001309:2;Name=ENSG00000295583;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	16453545	16499659	.	+	.	source_gene_common_name=STSP1;source_gene=ENSG00000227166.1;gene_id=HG002_chrY_G0000433;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=STSP1;gene_sources=liftoff;ID=HG002_chrY_G0000433;Name=STSP1
HG002_chrY	CAT	transcript	16453545	16499659	1000	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=HG002_chrY_T0001310;gene_id=HG002_chrY_G0000433;Parent=HG002_chrY_G0000433;transcript_name=HG002_chrY_T0001310;gene_name=STSP1;ID=HG002_chrY_T0001310;Name=STSP1
HG002_chrY	CAT	exon	16453545	16453687	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=HG002_chrY_T0001310;gene_id=HG002_chrY_G0000433;Parent=HG002_chrY_T0001310;transcript_name=HG002_chrY_T0001310;gene_name=STSP1;ID=exon:HG002_chrY_T0001310:0;Name=STSP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	16453688	16455939	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=HG002_chrY_T0001310;gene_id=HG002_chrY_G0000433;Parent=HG002_chrY_T0001310;transcript_name=HG002_chrY_T0001310;gene_name=STSP1;ID=intron:HG002_chrY_T0001310:0;Name=STSP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	16455940	16456270	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=HG002_chrY_T0001310;gene_id=HG002_chrY_G0000433;Parent=HG002_chrY_T0001310;transcript_name=HG002_chrY_T0001310;gene_name=STSP1;ID=exon:HG002_chrY_T0001310:1;Name=STSP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	16456271	16457907	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=HG002_chrY_T0001310;gene_id=HG002_chrY_G0000433;Parent=HG002_chrY_T0001310;transcript_name=HG002_chrY_T0001310;gene_name=STSP1;ID=intron:HG002_chrY_T0001310:1;Name=STSP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	16457908	16458326	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=HG002_chrY_T0001310;gene_id=HG002_chrY_G0000433;Parent=HG002_chrY_T0001310;transcript_name=HG002_chrY_T0001310;gene_name=STSP1;ID=exon:HG002_chrY_T0001310:2;Name=STSP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	16458327	16473095	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=HG002_chrY_T0001310;gene_id=HG002_chrY_G0000433;Parent=HG002_chrY_T0001310;transcript_name=HG002_chrY_T0001310;gene_name=STSP1;ID=intron:HG002_chrY_T0001310:2;Name=STSP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	16473096	16473252	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=HG002_chrY_T0001310;gene_id=HG002_chrY_G0000433;Parent=HG002_chrY_T0001310;transcript_name=HG002_chrY_T0001310;gene_name=STSP1;ID=exon:HG002_chrY_T0001310:3;Name=STSP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	16473253	16499558	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=HG002_chrY_T0001310;gene_id=HG002_chrY_G0000433;Parent=HG002_chrY_T0001310;transcript_name=HG002_chrY_T0001310;gene_name=STSP1;ID=intron:HG002_chrY_T0001310:3;Name=STSP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	16499559	16499659	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=HG002_chrY_T0001310;gene_id=HG002_chrY_G0000433;Parent=HG002_chrY_T0001310;transcript_name=HG002_chrY_T0001310;gene_name=STSP1;ID=exon:HG002_chrY_T0001310:4;Name=STSP1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	16596642	16604563	.	-	.	source_gene_common_name=ENSG00000295335;source_gene=ENSG00000295335.1;alternative_source_transcripts=ENST00000729374.1,ENST00000729374.1;gene_id=HG002_chrY_G0000434;gene_biotype=lncRNA;gene_name=ENSG00000295335;gene_sources=liftoff;ID=HG002_chrY_G0000434;Name=ENSG00000295335
HG002_chrY	CAT	transcript	16596642	16604563	1000	-	.	source_transcript=ENST00000729374.1;source_transcript_name=ENST00000729374;source_gene=ENSG00000295335.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295335.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729374.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295335;alternative_source_transcripts=ENST00000729374.1,ENST00000729374.1;transcript_id=HG002_chrY_T0001311;gene_id=HG002_chrY_G0000434;Parent=HG002_chrY_G0000434;transcript_name=HG002_chrY_T0001311;gene_name=ENSG00000295335;ID=HG002_chrY_T0001311;Name=ENSG00000295335
HG002_chrY	CAT	exon	16596642	16596996	.	-	.	source_transcript=ENST00000729374.1;source_transcript_name=ENST00000729374;source_gene=ENSG00000295335.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295335.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295335;alternative_source_transcripts=ENST00000729374.1,ENST00000729374.1;transcript_id=HG002_chrY_T0001311;gene_id=HG002_chrY_G0000434;Parent=HG002_chrY_T0001311;transcript_name=HG002_chrY_T0001311;gene_name=ENSG00000295335;ID=exon:HG002_chrY_T0001311:0;Name=ENSG00000295335;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	16596997	16604519	.	-	.	source_transcript=ENST00000729374.1;source_transcript_name=ENST00000729374;source_gene=ENSG00000295335.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295335.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295335;alternative_source_transcripts=ENST00000729374.1,ENST00000729374.1;transcript_id=HG002_chrY_T0001311;gene_id=HG002_chrY_G0000434;Parent=HG002_chrY_T0001311;transcript_name=HG002_chrY_T0001311;gene_name=ENSG00000295335;ID=intron:HG002_chrY_T0001311:0;Name=ENSG00000295335;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	16604520	16604563	.	-	.	source_transcript=ENST00000729374.1;source_transcript_name=ENST00000729374;source_gene=ENSG00000295335.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295335.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295335;alternative_source_transcripts=ENST00000729374.1,ENST00000729374.1;transcript_id=HG002_chrY_T0001311;gene_id=HG002_chrY_G0000434;Parent=HG002_chrY_T0001311;transcript_name=HG002_chrY_T0001311;gene_name=ENSG00000295335;ID=exon:HG002_chrY_T0001311:1;Name=ENSG00000295335;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	16964267	17031158	.	-	.	source_gene_common_name=ENSG00000300212;source_gene=ENSG00000300212.1;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;gene_id=HG002_chrY_G0000435;gene_biotype=lncRNA;gene_name=ENSG00000300212;gene_sources=liftoff;ID=HG002_chrY_G0000435;Name=ENSG00000300212
HG002_chrY	CAT	transcript	16964267	17031158	1000	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=HG002_chrY_T0001312;gene_id=HG002_chrY_G0000435;Parent=HG002_chrY_G0000435;transcript_name=HG002_chrY_T0001312;gene_name=ENSG00000300212;ID=HG002_chrY_T0001312;Name=ENSG00000300212
HG002_chrY	CAT	exon	16964267	16964964	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=HG002_chrY_T0001312;gene_id=HG002_chrY_G0000435;Parent=HG002_chrY_T0001312;transcript_name=HG002_chrY_T0001312;gene_name=ENSG00000300212;ID=exon:HG002_chrY_T0001312:0;Name=ENSG00000300212;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	16964965	17028797	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=HG002_chrY_T0001312;gene_id=HG002_chrY_G0000435;Parent=HG002_chrY_T0001312;transcript_name=HG002_chrY_T0001312;gene_name=ENSG00000300212;ID=intron:HG002_chrY_T0001312:0;Name=ENSG00000300212;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	17028798	17028942	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=HG002_chrY_T0001312;gene_id=HG002_chrY_G0000435;Parent=HG002_chrY_T0001312;transcript_name=HG002_chrY_T0001312;gene_name=ENSG00000300212;ID=exon:HG002_chrY_T0001312:1;Name=ENSG00000300212;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	17028943	17030483	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=HG002_chrY_T0001312;gene_id=HG002_chrY_G0000435;Parent=HG002_chrY_T0001312;transcript_name=HG002_chrY_T0001312;gene_name=ENSG00000300212;ID=intron:HG002_chrY_T0001312:1;Name=ENSG00000300212;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	17030484	17030663	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=HG002_chrY_T0001312;gene_id=HG002_chrY_G0000435;Parent=HG002_chrY_T0001312;transcript_name=HG002_chrY_T0001312;gene_name=ENSG00000300212;ID=exon:HG002_chrY_T0001312:2;Name=ENSG00000300212;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	17030664	17030883	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=HG002_chrY_T0001312;gene_id=HG002_chrY_G0000435;Parent=HG002_chrY_T0001312;transcript_name=HG002_chrY_T0001312;gene_name=ENSG00000300212;ID=intron:HG002_chrY_T0001312:2;Name=ENSG00000300212;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	17030884	17031158	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=HG002_chrY_T0001312;gene_id=HG002_chrY_G0000435;Parent=HG002_chrY_T0001312;transcript_name=HG002_chrY_T0001312;gene_name=ENSG00000300212;ID=exon:HG002_chrY_T0001312:3;Name=ENSG00000300212;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	17044596	17044727	.	-	.	source_gene_common_name=ENSG00000252689;source_gene=ENSG00000252689.1;alternative_source_transcripts=ENST00000516880.1,ENST00000516880.1;gene_id=HG002_chrY_G0000436;gene_biotype=snoRNA;gene_name=ENSG00000252689;gene_sources=liftoff;ID=HG002_chrY_G0000436;Name=ENSG00000252689
HG002_chrY	CAT	transcript	17044596	17044727	1000	-	.	source_transcript=ENST00000516880.1;source_transcript_name=ENST00000516880;source_gene=ENSG00000252689.1;source_gene_biotype=snoRNA;original_gene_id=ENSG00000252689.1;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=ENST00000516880.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516880.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000252689;alternative_source_transcripts=ENST00000516880.1,ENST00000516880.1;transcript_id=HG002_chrY_T0001313;gene_id=HG002_chrY_G0000436;Parent=HG002_chrY_G0000436;transcript_name=HG002_chrY_T0001313;gene_name=ENSG00000252689;ID=HG002_chrY_T0001313;Name=ENSG00000252689
HG002_chrY	CAT	exon	17044596	17044727	.	-	.	source_transcript=ENST00000516880.1;source_transcript_name=ENST00000516880;source_gene=ENSG00000252689.1;source_gene_biotype=snoRNA;original_gene_id=ENSG00000252689.1;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=ENST00000516880.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516880.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000252689;alternative_source_transcripts=ENST00000516880.1,ENST00000516880.1;transcript_id=HG002_chrY_T0001313;gene_id=HG002_chrY_G0000436;Parent=HG002_chrY_T0001313;transcript_name=HG002_chrY_T0001313;gene_name=ENSG00000252689;ID=exon:HG002_chrY_T0001313:0;Name=ENSG00000252689;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	17092494	17097653	.	+	.	source_gene_common_name=ENSG00000309341;source_gene=ENSG00000309341.1;alternative_source_transcripts=ENST00000840368.1,ENST00000840368.1;gene_id=HG002_chrY_G0000437;gene_biotype=lncRNA;gene_name=ENSG00000309341;gene_sources=liftoff;ID=HG002_chrY_G0000437;Name=ENSG00000309341
HG002_chrY	CAT	transcript	17092494	17097653	1000	+	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;alternative_source_transcripts=ENST00000840368.1,ENST00000840368.1;transcript_id=HG002_chrY_T0001314;gene_id=HG002_chrY_G0000437;Parent=HG002_chrY_G0000437;transcript_name=HG002_chrY_T0001314;gene_name=ENSG00000309341;ID=HG002_chrY_T0001314;Name=ENSG00000309341
HG002_chrY	CAT	exon	17092494	17092649	.	+	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;alternative_source_transcripts=ENST00000840368.1,ENST00000840368.1;transcript_id=HG002_chrY_T0001314;gene_id=HG002_chrY_G0000437;Parent=HG002_chrY_T0001314;transcript_name=HG002_chrY_T0001314;gene_name=ENSG00000309341;ID=exon:HG002_chrY_T0001314:0;Name=ENSG00000309341;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	17092650	17097478	.	+	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;alternative_source_transcripts=ENST00000840368.1,ENST00000840368.1;transcript_id=HG002_chrY_T0001314;gene_id=HG002_chrY_G0000437;Parent=HG002_chrY_T0001314;transcript_name=HG002_chrY_T0001314;gene_name=ENSG00000309341;ID=intron:HG002_chrY_T0001314:0;Name=ENSG00000309341;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	17097479	17097653	.	+	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;alternative_source_transcripts=ENST00000840368.1,ENST00000840368.1;transcript_id=HG002_chrY_T0001314;gene_id=HG002_chrY_G0000437;Parent=HG002_chrY_T0001314;transcript_name=HG002_chrY_T0001314;gene_name=ENSG00000309341;ID=exon:HG002_chrY_T0001314:1;Name=ENSG00000309341;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	17155307	17155413	.	+	.	source_gene_common_name=RNU6-109P;source_gene=ENSG00000252173.1;alternative_source_transcripts=ENST00000516364.1,ENST00000516364.1;gene_id=HG002_chrY_G0000438;gene_biotype=snRNA;gene_name=RNU6-109P;gene_sources=liftoff;ID=HG002_chrY_G0000438;Name=RNU6-109P
HG002_chrY	CAT	transcript	17155307	17155413	1000	+	.	source_transcript=ENST00000516364.1;source_transcript_name=RNU6-109P-201;source_gene=ENSG00000252173.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252173.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516364.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516364.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-109P;alternative_source_transcripts=ENST00000516364.1,ENST00000516364.1;transcript_id=HG002_chrY_T0001315;gene_id=HG002_chrY_G0000438;Parent=HG002_chrY_G0000438;transcript_name=HG002_chrY_T0001315;gene_name=RNU6-109P;ID=HG002_chrY_T0001315;Name=RNU6-109P
HG002_chrY	CAT	exon	17155307	17155413	.	+	.	source_transcript=ENST00000516364.1;source_transcript_name=RNU6-109P-201;source_gene=ENSG00000252173.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252173.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516364.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516364.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-109P;alternative_source_transcripts=ENST00000516364.1,ENST00000516364.1;transcript_id=HG002_chrY_T0001315;gene_id=HG002_chrY_G0000438;Parent=HG002_chrY_T0001315;transcript_name=HG002_chrY_T0001315;gene_name=RNU6-109P;ID=exon:HG002_chrY_T0001315:0;Name=RNU6-109P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	17242637	17242743	.	-	.	source_gene_common_name=RNU6-184P;source_gene=ENSG00000252323.1;alternative_source_transcripts=ENST00000516514.1,ENST00000516514.1;gene_id=HG002_chrY_G0000439;gene_biotype=snRNA;gene_name=RNU6-184P;gene_sources=liftoff;ID=HG002_chrY_G0000439;Name=RNU6-184P
HG002_chrY	CAT	transcript	17242637	17242743	1000	-	.	source_transcript=ENST00000516514.1;source_transcript_name=RNU6-184P-201;source_gene=ENSG00000252323.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252323.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516514.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516514.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-184P;alternative_source_transcripts=ENST00000516514.1,ENST00000516514.1;transcript_id=HG002_chrY_T0001316;gene_id=HG002_chrY_G0000439;Parent=HG002_chrY_G0000439;transcript_name=HG002_chrY_T0001316;gene_name=RNU6-184P;ID=HG002_chrY_T0001316;Name=RNU6-184P
HG002_chrY	CAT	exon	17242637	17242743	.	-	.	source_transcript=ENST00000516514.1;source_transcript_name=RNU6-184P-201;source_gene=ENSG00000252323.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252323.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516514.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516514.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-184P;alternative_source_transcripts=ENST00000516514.1,ENST00000516514.1;transcript_id=HG002_chrY_T0001316;gene_id=HG002_chrY_G0000439;Parent=HG002_chrY_T0001316;transcript_name=HG002_chrY_T0001316;gene_name=RNU6-184P;ID=exon:HG002_chrY_T0001316:0;Name=RNU6-184P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	17300393	17305552	.	-	.	source_gene_common_name=ENSG00000309341;source_gene=ENSG00000309341.1;gene_id=HG002_chrY_G0000440;gene_biotype=lncRNA;gene_name=ENSG00000309341;gene_sources=liftoff;ID=HG002_chrY_G0000440;Name=ENSG00000309341
HG002_chrY	CAT	transcript	17300393	17305552	1000	-	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;transcript_id=HG002_chrY_T0001317;gene_id=HG002_chrY_G0000440;Parent=HG002_chrY_G0000440;transcript_name=HG002_chrY_T0001317;gene_name=ENSG00000309341;ID=HG002_chrY_T0001317;Name=ENSG00000309341
HG002_chrY	CAT	exon	17300393	17300567	.	-	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;transcript_id=HG002_chrY_T0001317;gene_id=HG002_chrY_G0000440;Parent=HG002_chrY_T0001317;transcript_name=HG002_chrY_T0001317;gene_name=ENSG00000309341;ID=exon:HG002_chrY_T0001317:0;Name=ENSG00000309341;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	17300568	17305396	.	-	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;transcript_id=HG002_chrY_T0001317;gene_id=HG002_chrY_G0000440;Parent=HG002_chrY_T0001317;transcript_name=HG002_chrY_T0001317;gene_name=ENSG00000309341;ID=intron:HG002_chrY_T0001317:0;Name=ENSG00000309341;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	17305397	17305552	.	-	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;transcript_id=HG002_chrY_T0001317;gene_id=HG002_chrY_G0000440;Parent=HG002_chrY_T0001317;transcript_name=HG002_chrY_T0001317;gene_name=ENSG00000309341;ID=exon:HG002_chrY_T0001317:1;Name=ENSG00000309341;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	17506090	17550890	.	-	.	source_gene_common_name=ENSG00000286201;source_gene=ENSG00000286201.2;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;gene_id=HG002_chrY_G0000441;gene_biotype=lncRNA;gene_name=ENSG00000286201;gene_sources=liftoff;ID=HG002_chrY_G0000441;Name=ENSG00000286201
HG002_chrY	CAT	transcript	17506090	17550890	1000	-	.	source_transcript=ENST00000651678.1;source_transcript_name=ENST00000651678;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651678.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;transcript_id=HG002_chrY_T0001318;gene_id=HG002_chrY_G0000441;Parent=HG002_chrY_G0000441;transcript_name=HG002_chrY_T0001318;gene_name=ENSG00000286201;ID=HG002_chrY_T0001318;Name=ENSG00000286201
HG002_chrY	CAT	exon	17506090	17512203	.	-	.	source_transcript=ENST00000651678.1;source_transcript_name=ENST00000651678;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651678.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;transcript_id=HG002_chrY_T0001318;gene_id=HG002_chrY_G0000441;Parent=HG002_chrY_T0001318;transcript_name=HG002_chrY_T0001318;gene_name=ENSG00000286201;ID=exon:HG002_chrY_T0001318:0;Name=ENSG00000286201;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	17512204	17534897	.	-	.	source_transcript=ENST00000651678.1;source_transcript_name=ENST00000651678;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651678.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;transcript_id=HG002_chrY_T0001318;gene_id=HG002_chrY_G0000441;Parent=HG002_chrY_T0001318;transcript_name=HG002_chrY_T0001318;gene_name=ENSG00000286201;ID=intron:HG002_chrY_T0001318:0;Name=ENSG00000286201;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	17534898	17534940	.	-	.	source_transcript=ENST00000651678.1;source_transcript_name=ENST00000651678;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651678.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;transcript_id=HG002_chrY_T0001318;gene_id=HG002_chrY_G0000441;Parent=HG002_chrY_T0001318;transcript_name=HG002_chrY_T0001318;gene_name=ENSG00000286201;ID=exon:HG002_chrY_T0001318:1;Name=ENSG00000286201;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	17534941	17550394	.	-	.	source_transcript=ENST00000651678.1;source_transcript_name=ENST00000651678;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651678.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;transcript_id=HG002_chrY_T0001318;gene_id=HG002_chrY_G0000441;Parent=HG002_chrY_T0001318;transcript_name=HG002_chrY_T0001318;gene_name=ENSG00000286201;ID=intron:HG002_chrY_T0001318:1;Name=ENSG00000286201;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	17550395	17550890	.	-	.	source_transcript=ENST00000651678.1;source_transcript_name=ENST00000651678;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651678.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;transcript_id=HG002_chrY_T0001318;gene_id=HG002_chrY_G0000441;Parent=HG002_chrY_T0001318;transcript_name=HG002_chrY_T0001318;gene_name=ENSG00000286201;ID=exon:HG002_chrY_T0001318:2;Name=ENSG00000286201;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	17507499	17535047	1000	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=HG002_chrY_T0001319;gene_id=HG002_chrY_G0000441;Parent=HG002_chrY_G0000441;transcript_name=HG002_chrY_T0001319;gene_name=ENSG00000286201;ID=HG002_chrY_T0001319;Name=ENSG00000286201
HG002_chrY	CAT	exon	17507499	17507944	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=HG002_chrY_T0001319;gene_id=HG002_chrY_G0000441;Parent=HG002_chrY_T0001319;transcript_name=HG002_chrY_T0001319;gene_name=ENSG00000286201;ID=exon:HG002_chrY_T0001319:0;Name=ENSG00000286201;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	17507945	17512086	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=HG002_chrY_T0001319;gene_id=HG002_chrY_G0000441;Parent=HG002_chrY_T0001319;transcript_name=HG002_chrY_T0001319;gene_name=ENSG00000286201;ID=intron:HG002_chrY_T0001319:0;Name=ENSG00000286201;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	17512087	17512203	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=HG002_chrY_T0001319;gene_id=HG002_chrY_G0000441;Parent=HG002_chrY_T0001319;transcript_name=HG002_chrY_T0001319;gene_name=ENSG00000286201;ID=exon:HG002_chrY_T0001319:1;Name=ENSG00000286201;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	17512204	17525830	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=HG002_chrY_T0001319;gene_id=HG002_chrY_G0000441;Parent=HG002_chrY_T0001319;transcript_name=HG002_chrY_T0001319;gene_name=ENSG00000286201;ID=intron:HG002_chrY_T0001319:1;Name=ENSG00000286201;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	17525831	17525922	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=HG002_chrY_T0001319;gene_id=HG002_chrY_G0000441;Parent=HG002_chrY_T0001319;transcript_name=HG002_chrY_T0001319;gene_name=ENSG00000286201;ID=exon:HG002_chrY_T0001319:2;Name=ENSG00000286201;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	17525923	17534897	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=HG002_chrY_T0001319;gene_id=HG002_chrY_G0000441;Parent=HG002_chrY_T0001319;transcript_name=HG002_chrY_T0001319;gene_name=ENSG00000286201;ID=intron:HG002_chrY_T0001319:2;Name=ENSG00000286201;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	17534898	17535047	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=HG002_chrY_T0001319;gene_id=HG002_chrY_G0000441;Parent=HG002_chrY_T0001319;transcript_name=HG002_chrY_T0001319;gene_name=ENSG00000286201;ID=exon:HG002_chrY_T0001319:3;Name=ENSG00000286201;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18099141	18099967	.	+	.	source_gene_common_name=SURF6P1;source_gene=ENSG00000228518.1;alternative_source_transcripts=ENST00000451854.1,ENST00000451854.1;gene_id=HG002_chrY_G0000442;gene_biotype=processed_pseudogene;gene_name=SURF6P1;gene_sources=liftoff;ID=HG002_chrY_G0000442;Name=SURF6P1
HG002_chrY	CAT	transcript	18099141	18099967	1000	+	.	source_transcript=ENST00000451854.1;source_transcript_name=SURF6P1-201;source_gene=ENSG00000228518.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228518.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000451854.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451854.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SURF6P1;alternative_source_transcripts=ENST00000451854.1,ENST00000451854.1;transcript_id=HG002_chrY_T0001320;gene_id=HG002_chrY_G0000442;Parent=HG002_chrY_G0000442;transcript_name=HG002_chrY_T0001320;gene_name=SURF6P1;ID=HG002_chrY_T0001320;Name=SURF6P1
HG002_chrY	CAT	exon	18099141	18099967	.	+	.	source_transcript=ENST00000451854.1;source_transcript_name=SURF6P1-201;source_gene=ENSG00000228518.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228518.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000451854.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451854.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SURF6P1;alternative_source_transcripts=ENST00000451854.1,ENST00000451854.1;transcript_id=HG002_chrY_T0001320;gene_id=HG002_chrY_G0000442;Parent=HG002_chrY_T0001320;transcript_name=HG002_chrY_T0001320;gene_name=SURF6P1;ID=exon:HG002_chrY_T0001320:0;Name=SURF6P1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18371191	18371526	.	-	.	source_gene_common_name=ELOCP35;source_gene=ENSG00000271595.1;alternative_source_transcripts=ENST00000604289.1;gene_id=HG002_chrY_G0000443;gene_biotype=processed_pseudogene;gene_name=ELOCP35;gene_sources=liftoff;ID=HG002_chrY_G0000443;Name=ELOCP35
HG002_chrY	CAT	transcript	18371191	18371526	1000	-	.	source_transcript=ENST00000604289.1;source_transcript_name=ELOCP35-201;source_gene=ENSG00000271595.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271595.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604289.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP35;alternative_source_transcripts=ENST00000604289.1;transcript_id=HG002_chrY_T0001321;gene_id=HG002_chrY_G0000443;Parent=HG002_chrY_G0000443;transcript_name=HG002_chrY_T0001321;gene_name=ELOCP35;ID=HG002_chrY_T0001321;Name=ELOCP35
HG002_chrY	CAT	exon	18371191	18371526	.	-	.	source_transcript=ENST00000604289.1;source_transcript_name=ELOCP35-201;source_gene=ENSG00000271595.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271595.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604289.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP35;alternative_source_transcripts=ENST00000604289.1;transcript_id=HG002_chrY_T0001321;gene_id=HG002_chrY_G0000443;Parent=HG002_chrY_T0001321;transcript_name=HG002_chrY_T0001321;gene_name=ELOCP35;ID=exon:HG002_chrY_T0001321:0;Name=ELOCP35;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18407286	18423489	.	+	.	source_gene_common_name=FAM41AY2;source_gene=ENSG00000290726.3_1;gene_id=HG002_chrY_G0000444;gene_biotype=lncRNA;gene_name=FAM41AY2;gene_sources=liftoff;ID=HG002_chrY_G0000444;Name=FAM41AY2
HG002_chrY	CAT	transcript	18407286	18421338	1000	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001322;gene_id=HG002_chrY_G0000444;Parent=HG002_chrY_G0000444;transcript_name=HG002_chrY_T0001322;gene_name=FAM41AY2;ID=HG002_chrY_T0001322;Name=FAM41AY2
HG002_chrY	CAT	exon	18407286	18407443	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001322;gene_id=HG002_chrY_G0000444;Parent=HG002_chrY_T0001322;transcript_name=HG002_chrY_T0001322;gene_name=FAM41AY2;ID=exon:HG002_chrY_T0001322:0;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18407444	18408038	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001322;gene_id=HG002_chrY_G0000444;Parent=HG002_chrY_T0001322;transcript_name=HG002_chrY_T0001322;gene_name=FAM41AY2;ID=intron:HG002_chrY_T0001322:0;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18408039	18408088	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001322;gene_id=HG002_chrY_G0000444;Parent=HG002_chrY_T0001322;transcript_name=HG002_chrY_T0001322;gene_name=FAM41AY2;ID=exon:HG002_chrY_T0001322:1;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18408089	18419417	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001322;gene_id=HG002_chrY_G0000444;Parent=HG002_chrY_T0001322;transcript_name=HG002_chrY_T0001322;gene_name=FAM41AY2;ID=intron:HG002_chrY_T0001322:1;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18419418	18419546	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001322;gene_id=HG002_chrY_G0000444;Parent=HG002_chrY_T0001322;transcript_name=HG002_chrY_T0001322;gene_name=FAM41AY2;ID=exon:HG002_chrY_T0001322:2;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18419547	18419793	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001322;gene_id=HG002_chrY_G0000444;Parent=HG002_chrY_T0001322;transcript_name=HG002_chrY_T0001322;gene_name=FAM41AY2;ID=intron:HG002_chrY_T0001322:2;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18419794	18419887	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001322;gene_id=HG002_chrY_G0000444;Parent=HG002_chrY_T0001322;transcript_name=HG002_chrY_T0001322;gene_name=FAM41AY2;ID=exon:HG002_chrY_T0001322:3;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18419888	18420480	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001322;gene_id=HG002_chrY_G0000444;Parent=HG002_chrY_T0001322;transcript_name=HG002_chrY_T0001322;gene_name=FAM41AY2;ID=intron:HG002_chrY_T0001322:3;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18420481	18420651	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001322;gene_id=HG002_chrY_G0000444;Parent=HG002_chrY_T0001322;transcript_name=HG002_chrY_T0001322;gene_name=FAM41AY2;ID=exon:HG002_chrY_T0001322:4;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18420652	18420760	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001322;gene_id=HG002_chrY_G0000444;Parent=HG002_chrY_T0001322;transcript_name=HG002_chrY_T0001322;gene_name=FAM41AY2;ID=intron:HG002_chrY_T0001322:4;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18420761	18420854	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001322;gene_id=HG002_chrY_G0000444;Parent=HG002_chrY_T0001322;transcript_name=HG002_chrY_T0001322;gene_name=FAM41AY2;ID=exon:HG002_chrY_T0001322:5;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18420855	18421128	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001322;gene_id=HG002_chrY_G0000444;Parent=HG002_chrY_T0001322;transcript_name=HG002_chrY_T0001322;gene_name=FAM41AY2;ID=intron:HG002_chrY_T0001322:5;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18421129	18421338	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001322;gene_id=HG002_chrY_G0000444;Parent=HG002_chrY_T0001322;transcript_name=HG002_chrY_T0001322;gene_name=FAM41AY2;ID=exon:HG002_chrY_T0001322:6;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18421208	18423489	1000	+	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001324;gene_id=HG002_chrY_G0000444;Parent=HG002_chrY_G0000444;transcript_name=HG002_chrY_T0001324;gene_name=FAM41AY2;ID=HG002_chrY_T0001324;Name=FAM41AY2
HG002_chrY	CAT	exon	18421208	18421338	.	+	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001324;gene_id=HG002_chrY_G0000444;Parent=HG002_chrY_T0001324;transcript_name=HG002_chrY_T0001324;gene_name=FAM41AY2;ID=exon:HG002_chrY_T0001324:0;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18421339	18422031	.	+	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001324;gene_id=HG002_chrY_G0000444;Parent=HG002_chrY_T0001324;transcript_name=HG002_chrY_T0001324;gene_name=FAM41AY2;ID=intron:HG002_chrY_T0001324:0;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18422032	18422253	.	+	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001324;gene_id=HG002_chrY_G0000444;Parent=HG002_chrY_T0001324;transcript_name=HG002_chrY_T0001324;gene_name=FAM41AY2;ID=exon:HG002_chrY_T0001324:1;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18422254	18422335	.	+	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001324;gene_id=HG002_chrY_G0000444;Parent=HG002_chrY_T0001324;transcript_name=HG002_chrY_T0001324;gene_name=FAM41AY2;ID=intron:HG002_chrY_T0001324:1;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18422336	18423489	.	+	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001324;gene_id=HG002_chrY_G0000444;Parent=HG002_chrY_T0001324;transcript_name=HG002_chrY_T0001324;gene_name=FAM41AY2;ID=exon:HG002_chrY_T0001324:2;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18420822	18423035	.	+	.	source_gene_common_name=ENSG00000282909;source_gene=ENSG00000282909.3;gene_id=HG002_chrY_G0000445;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000282909;gene_sources=liftoff;ID=HG002_chrY_G0000445;Name=ENSG00000282909
HG002_chrY	CAT	transcript	18420822	18423035	1000	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG002_chrY_T0001323;gene_id=HG002_chrY_G0000445;Parent=HG002_chrY_G0000445;transcript_name=HG002_chrY_T0001323;gene_name=ENSG00000282909;ID=HG002_chrY_T0001323;Name=ENSG00000282909
HG002_chrY	CAT	exon	18420822	18421030	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG002_chrY_T0001323;gene_id=HG002_chrY_G0000445;Parent=HG002_chrY_T0001323;transcript_name=HG002_chrY_T0001323;gene_name=ENSG00000282909;ID=exon:HG002_chrY_T0001323:0;Name=ENSG00000282909;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18421031	18421073	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG002_chrY_T0001323;gene_id=HG002_chrY_G0000445;Parent=HG002_chrY_T0001323;transcript_name=HG002_chrY_T0001323;gene_name=ENSG00000282909;ID=intron:HG002_chrY_T0001323:0;Name=ENSG00000282909;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18421074	18421338	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG002_chrY_T0001323;gene_id=HG002_chrY_G0000445;Parent=HG002_chrY_T0001323;transcript_name=HG002_chrY_T0001323;gene_name=ENSG00000282909;ID=exon:HG002_chrY_T0001323:1;Name=ENSG00000282909;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18421339	18421427	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG002_chrY_T0001323;gene_id=HG002_chrY_G0000445;Parent=HG002_chrY_T0001323;transcript_name=HG002_chrY_T0001323;gene_name=ENSG00000282909;ID=intron:HG002_chrY_T0001323:1;Name=ENSG00000282909;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18421428	18421547	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG002_chrY_T0001323;gene_id=HG002_chrY_G0000445;Parent=HG002_chrY_T0001323;transcript_name=HG002_chrY_T0001323;gene_name=ENSG00000282909;ID=exon:HG002_chrY_T0001323:2;Name=ENSG00000282909;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18421548	18421872	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG002_chrY_T0001323;gene_id=HG002_chrY_G0000445;Parent=HG002_chrY_T0001323;transcript_name=HG002_chrY_T0001323;gene_name=ENSG00000282909;ID=intron:HG002_chrY_T0001323:2;Name=ENSG00000282909;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18421873	18421967	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG002_chrY_T0001323;gene_id=HG002_chrY_G0000445;Parent=HG002_chrY_T0001323;transcript_name=HG002_chrY_T0001323;gene_name=ENSG00000282909;ID=exon:HG002_chrY_T0001323:3;Name=ENSG00000282909;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18421968	18422335	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG002_chrY_T0001323;gene_id=HG002_chrY_G0000445;Parent=HG002_chrY_T0001323;transcript_name=HG002_chrY_T0001323;gene_name=ENSG00000282909;ID=intron:HG002_chrY_T0001323:3;Name=ENSG00000282909;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18422336	18422452	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG002_chrY_T0001323;gene_id=HG002_chrY_G0000445;Parent=HG002_chrY_T0001323;transcript_name=HG002_chrY_T0001323;gene_name=ENSG00000282909;ID=exon:HG002_chrY_T0001323:4;Name=ENSG00000282909;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18422453	18422908	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG002_chrY_T0001323;gene_id=HG002_chrY_G0000445;Parent=HG002_chrY_T0001323;transcript_name=HG002_chrY_T0001323;gene_name=ENSG00000282909;ID=intron:HG002_chrY_T0001323:4;Name=ENSG00000282909;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18422909	18423035	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG002_chrY_T0001323;gene_id=HG002_chrY_G0000445;Parent=HG002_chrY_T0001323;transcript_name=HG002_chrY_T0001323;gene_name=ENSG00000282909;ID=exon:HG002_chrY_T0001323:5;Name=ENSG00000282909;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18423156	18425358	.	-	.	source_gene_common_name=TUBB1P2;source_gene=ENSG00000228578.1;gene_id=HG002_chrY_G0000446;gene_biotype=unprocessed_pseudogene;gene_name=TUBB1P2;gene_sources=liftoff,transMap;ID=HG002_chrY_G0000446;Name=TUBB1P2
HG002_chrY	CAT	transcript	18423156	18425358	1000	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=transMap;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG002_chrY_T0001325;gene_id=HG002_chrY_G0000446;Parent=HG002_chrY_G0000446;transcript_name=HG002_chrY_T0001325;gene_name=TUBB1P2;ID=HG002_chrY_T0001325;Name=TUBB1P2
HG002_chrY	CAT	exon	18423156	18424204	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=transMap;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG002_chrY_T0001325;gene_id=HG002_chrY_G0000446;Parent=HG002_chrY_T0001325;transcript_name=HG002_chrY_T0001325;gene_name=TUBB1P2;ID=exon:HG002_chrY_T0001325:0;Name=TUBB1P2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18424205	18424716	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=transMap;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG002_chrY_T0001325;gene_id=HG002_chrY_G0000446;Parent=HG002_chrY_T0001325;transcript_name=HG002_chrY_T0001325;gene_name=TUBB1P2;ID=intron:HG002_chrY_T0001325:0;Name=TUBB1P2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18424717	18424996	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=transMap;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG002_chrY_T0001325;gene_id=HG002_chrY_G0000446;Parent=HG002_chrY_T0001325;transcript_name=HG002_chrY_T0001325;gene_name=TUBB1P2;ID=exon:HG002_chrY_T0001325:1;Name=TUBB1P2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18424997	18425301	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=transMap;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG002_chrY_T0001325;gene_id=HG002_chrY_G0000446;Parent=HG002_chrY_T0001325;transcript_name=HG002_chrY_T0001325;gene_name=TUBB1P2;ID=intron:HG002_chrY_T0001325:1;Name=TUBB1P2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18425302	18425358	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=transMap;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG002_chrY_T0001325;gene_id=HG002_chrY_G0000446;Parent=HG002_chrY_T0001325;transcript_name=HG002_chrY_T0001325;gene_name=TUBB1P2;ID=exon:HG002_chrY_T0001325:2;Name=TUBB1P2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18423156	18425358	1000	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG002_chrY_T0001326;gene_id=HG002_chrY_G0000446;Parent=HG002_chrY_G0000446;transcript_name=HG002_chrY_T0001326;gene_name=TUBB1P2;ID=HG002_chrY_T0001326;Name=TUBB1P2
HG002_chrY	CAT	exon	18423156	18424204	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG002_chrY_T0001326;gene_id=HG002_chrY_G0000446;Parent=HG002_chrY_T0001326;transcript_name=HG002_chrY_T0001326;gene_name=TUBB1P2;ID=exon:HG002_chrY_T0001326:0;Name=TUBB1P2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18424205	18424716	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG002_chrY_T0001326;gene_id=HG002_chrY_G0000446;Parent=HG002_chrY_T0001326;transcript_name=HG002_chrY_T0001326;gene_name=TUBB1P2;ID=intron:HG002_chrY_T0001326:0;Name=TUBB1P2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18424717	18424807	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG002_chrY_T0001326;gene_id=HG002_chrY_G0000446;Parent=HG002_chrY_T0001326;transcript_name=HG002_chrY_T0001326;gene_name=TUBB1P2;ID=exon:HG002_chrY_T0001326:1;Name=TUBB1P2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18424808	18424887	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG002_chrY_T0001326;gene_id=HG002_chrY_G0000446;Parent=HG002_chrY_T0001326;transcript_name=HG002_chrY_T0001326;gene_name=TUBB1P2;ID=intron:HG002_chrY_T0001326:1;Name=TUBB1P2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18424888	18424996	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG002_chrY_T0001326;gene_id=HG002_chrY_G0000446;Parent=HG002_chrY_T0001326;transcript_name=HG002_chrY_T0001326;gene_name=TUBB1P2;ID=exon:HG002_chrY_T0001326:2;Name=TUBB1P2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18424997	18425301	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG002_chrY_T0001326;gene_id=HG002_chrY_G0000446;Parent=HG002_chrY_T0001326;transcript_name=HG002_chrY_T0001326;gene_name=TUBB1P2;ID=intron:HG002_chrY_T0001326:2;Name=TUBB1P2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18425302	18425358	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG002_chrY_T0001326;gene_id=HG002_chrY_G0000446;Parent=HG002_chrY_T0001326;transcript_name=HG002_chrY_T0001326;gene_name=TUBB1P2;ID=exon:HG002_chrY_T0001326:3;Name=TUBB1P2;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18458408	18486292	.	-	.	source_gene_common_name=FAM224B;source_gene=ENSG00000230663.2;alternative_source_transcripts=ENST00000729283.1;gene_id=HG002_chrY_G0000447;gene_biotype=lncRNA;gene_name=FAM224B;gene_sources=liftoff;ID=HG002_chrY_G0000447;Name=FAM224B
HG002_chrY	CAT	transcript	18458408	18486197	1000	-	.	source_transcript=ENST00000729283.1;source_transcript_name=FAM224B-202;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729283.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729283.1;transcript_id=HG002_chrY_T0001327;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_G0000447;transcript_name=HG002_chrY_T0001327;gene_name=FAM224B;ID=HG002_chrY_T0001327;Name=FAM224B
HG002_chrY	CAT	exon	18458408	18458718	.	-	.	source_transcript=ENST00000729283.1;source_transcript_name=FAM224B-202;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729283.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729283.1;transcript_id=HG002_chrY_T0001327;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001327;transcript_name=HG002_chrY_T0001327;gene_name=FAM224B;ID=exon:HG002_chrY_T0001327:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18458719	18483029	.	-	.	source_transcript=ENST00000729283.1;source_transcript_name=FAM224B-202;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729283.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729283.1;transcript_id=HG002_chrY_T0001327;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001327;transcript_name=HG002_chrY_T0001327;gene_name=FAM224B;ID=intron:HG002_chrY_T0001327:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18483030	18483147	.	-	.	source_transcript=ENST00000729283.1;source_transcript_name=FAM224B-202;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729283.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729283.1;transcript_id=HG002_chrY_T0001327;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001327;transcript_name=HG002_chrY_T0001327;gene_name=FAM224B;ID=exon:HG002_chrY_T0001327:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18483148	18485647	.	-	.	source_transcript=ENST00000729283.1;source_transcript_name=FAM224B-202;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729283.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729283.1;transcript_id=HG002_chrY_T0001327;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001327;transcript_name=HG002_chrY_T0001327;gene_name=FAM224B;ID=intron:HG002_chrY_T0001327:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485648	18486197	.	-	.	source_transcript=ENST00000729283.1;source_transcript_name=FAM224B-202;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729283.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729283.1;transcript_id=HG002_chrY_T0001327;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001327;transcript_name=HG002_chrY_T0001327;gene_name=FAM224B;ID=exon:HG002_chrY_T0001327:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18459123	18486086	1000	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=HG002_chrY_T0001328;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_G0000447;transcript_name=HG002_chrY_T0001328;gene_name=FAM224B;ID=HG002_chrY_T0001328;Name=FAM224B
HG002_chrY	CAT	exon	18459123	18460277	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=HG002_chrY_T0001328;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001328;transcript_name=HG002_chrY_T0001328;gene_name=FAM224B;ID=exon:HG002_chrY_T0001328:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18460278	18460364	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=HG002_chrY_T0001328;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001328;transcript_name=HG002_chrY_T0001328;gene_name=FAM224B;ID=intron:HG002_chrY_T0001328:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18460365	18460449	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=HG002_chrY_T0001328;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001328;transcript_name=HG002_chrY_T0001328;gene_name=FAM224B;ID=exon:HG002_chrY_T0001328:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18460450	18462098	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=HG002_chrY_T0001328;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001328;transcript_name=HG002_chrY_T0001328;gene_name=FAM224B;ID=intron:HG002_chrY_T0001328:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18462099	18462333	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=HG002_chrY_T0001328;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001328;transcript_name=HG002_chrY_T0001328;gene_name=FAM224B;ID=exon:HG002_chrY_T0001328:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18462334	18483029	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=HG002_chrY_T0001328;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001328;transcript_name=HG002_chrY_T0001328;gene_name=FAM224B;ID=intron:HG002_chrY_T0001328:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18483030	18483147	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=HG002_chrY_T0001328;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001328;transcript_name=HG002_chrY_T0001328;gene_name=FAM224B;ID=exon:HG002_chrY_T0001328:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18483148	18485647	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=HG002_chrY_T0001328;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001328;transcript_name=HG002_chrY_T0001328;gene_name=FAM224B;ID=intron:HG002_chrY_T0001328:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485648	18486086	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=HG002_chrY_T0001328;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001328;transcript_name=HG002_chrY_T0001328;gene_name=FAM224B;ID=exon:HG002_chrY_T0001328:4;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18459123	18486194	1000	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1;transcript_id=HG002_chrY_T0001329;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_G0000447;transcript_name=HG002_chrY_T0001329;gene_name=FAM224B;ID=HG002_chrY_T0001329;Name=FAM224B
HG002_chrY	CAT	exon	18459123	18460277	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1;transcript_id=HG002_chrY_T0001329;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001329;transcript_name=HG002_chrY_T0001329;gene_name=FAM224B;ID=exon:HG002_chrY_T0001329:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18460278	18460364	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1;transcript_id=HG002_chrY_T0001329;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001329;transcript_name=HG002_chrY_T0001329;gene_name=FAM224B;ID=intron:HG002_chrY_T0001329:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18460365	18460449	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1;transcript_id=HG002_chrY_T0001329;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001329;transcript_name=HG002_chrY_T0001329;gene_name=FAM224B;ID=exon:HG002_chrY_T0001329:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18460450	18483029	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1;transcript_id=HG002_chrY_T0001329;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001329;transcript_name=HG002_chrY_T0001329;gene_name=FAM224B;ID=intron:HG002_chrY_T0001329:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18483030	18483147	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1;transcript_id=HG002_chrY_T0001329;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001329;transcript_name=HG002_chrY_T0001329;gene_name=FAM224B;ID=exon:HG002_chrY_T0001329:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18483148	18485647	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1;transcript_id=HG002_chrY_T0001329;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001329;transcript_name=HG002_chrY_T0001329;gene_name=FAM224B;ID=intron:HG002_chrY_T0001329:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485648	18486194	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1;transcript_id=HG002_chrY_T0001329;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001329;transcript_name=HG002_chrY_T0001329;gene_name=FAM224B;ID=exon:HG002_chrY_T0001329:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18459126	18486170	1000	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=HG002_chrY_T0001330;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_G0000447;transcript_name=HG002_chrY_T0001330;gene_name=FAM224B;ID=HG002_chrY_T0001330;Name=FAM224B
HG002_chrY	CAT	exon	18459126	18460277	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=HG002_chrY_T0001330;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001330;transcript_name=HG002_chrY_T0001330;gene_name=FAM224B;ID=exon:HG002_chrY_T0001330:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18460278	18460364	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=HG002_chrY_T0001330;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001330;transcript_name=HG002_chrY_T0001330;gene_name=FAM224B;ID=intron:HG002_chrY_T0001330:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18460365	18460449	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=HG002_chrY_T0001330;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001330;transcript_name=HG002_chrY_T0001330;gene_name=FAM224B;ID=exon:HG002_chrY_T0001330:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18460450	18481564	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=HG002_chrY_T0001330;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001330;transcript_name=HG002_chrY_T0001330;gene_name=FAM224B;ID=intron:HG002_chrY_T0001330:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18481565	18481694	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=HG002_chrY_T0001330;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001330;transcript_name=HG002_chrY_T0001330;gene_name=FAM224B;ID=exon:HG002_chrY_T0001330:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18481695	18483029	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=HG002_chrY_T0001330;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001330;transcript_name=HG002_chrY_T0001330;gene_name=FAM224B;ID=intron:HG002_chrY_T0001330:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18483030	18483147	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=HG002_chrY_T0001330;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001330;transcript_name=HG002_chrY_T0001330;gene_name=FAM224B;ID=exon:HG002_chrY_T0001330:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18483148	18485647	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=HG002_chrY_T0001330;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001330;transcript_name=HG002_chrY_T0001330;gene_name=FAM224B;ID=intron:HG002_chrY_T0001330:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485648	18486170	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=HG002_chrY_T0001330;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001330;transcript_name=HG002_chrY_T0001330;gene_name=FAM224B;ID=exon:HG002_chrY_T0001330:4;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18459605	18486165	1000	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG002_chrY_T0001331;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_G0000447;transcript_name=HG002_chrY_T0001331;gene_name=FAM224B;ID=HG002_chrY_T0001331;Name=FAM224B
HG002_chrY	CAT	exon	18459605	18460277	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG002_chrY_T0001331;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001331;transcript_name=HG002_chrY_T0001331;gene_name=FAM224B;ID=exon:HG002_chrY_T0001331:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18460278	18460364	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG002_chrY_T0001331;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001331;transcript_name=HG002_chrY_T0001331;gene_name=FAM224B;ID=intron:HG002_chrY_T0001331:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18460365	18460449	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG002_chrY_T0001331;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001331;transcript_name=HG002_chrY_T0001331;gene_name=FAM224B;ID=exon:HG002_chrY_T0001331:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18460450	18477723	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG002_chrY_T0001331;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001331;transcript_name=HG002_chrY_T0001331;gene_name=FAM224B;ID=intron:HG002_chrY_T0001331:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18477724	18477780	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG002_chrY_T0001331;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001331;transcript_name=HG002_chrY_T0001331;gene_name=FAM224B;ID=exon:HG002_chrY_T0001331:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18477781	18478205	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG002_chrY_T0001331;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001331;transcript_name=HG002_chrY_T0001331;gene_name=FAM224B;ID=intron:HG002_chrY_T0001331:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18478206	18478279	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG002_chrY_T0001331;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001331;transcript_name=HG002_chrY_T0001331;gene_name=FAM224B;ID=exon:HG002_chrY_T0001331:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18478280	18479073	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG002_chrY_T0001331;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001331;transcript_name=HG002_chrY_T0001331;gene_name=FAM224B;ID=intron:HG002_chrY_T0001331:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18479074	18479229	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG002_chrY_T0001331;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001331;transcript_name=HG002_chrY_T0001331;gene_name=FAM224B;ID=exon:HG002_chrY_T0001331:4;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18479230	18481564	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG002_chrY_T0001331;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001331;transcript_name=HG002_chrY_T0001331;gene_name=FAM224B;ID=intron:HG002_chrY_T0001331:4;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18481565	18481694	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG002_chrY_T0001331;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001331;transcript_name=HG002_chrY_T0001331;gene_name=FAM224B;ID=exon:HG002_chrY_T0001331:5;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18481695	18483029	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG002_chrY_T0001331;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001331;transcript_name=HG002_chrY_T0001331;gene_name=FAM224B;ID=intron:HG002_chrY_T0001331:5;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18483030	18483147	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG002_chrY_T0001331;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001331;transcript_name=HG002_chrY_T0001331;gene_name=FAM224B;ID=exon:HG002_chrY_T0001331:6;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18483148	18485647	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG002_chrY_T0001331;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001331;transcript_name=HG002_chrY_T0001331;gene_name=FAM224B;ID=intron:HG002_chrY_T0001331:6;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485648	18485881	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG002_chrY_T0001331;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001331;transcript_name=HG002_chrY_T0001331;gene_name=FAM224B;ID=exon:HG002_chrY_T0001331:7;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18485882	18485997	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG002_chrY_T0001331;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001331;transcript_name=HG002_chrY_T0001331;gene_name=FAM224B;ID=intron:HG002_chrY_T0001331:7;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485998	18486165	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG002_chrY_T0001331;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001331;transcript_name=HG002_chrY_T0001331;gene_name=FAM224B;ID=exon:HG002_chrY_T0001331:8;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18459617	18486206	1000	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=HG002_chrY_T0001332;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_G0000447;transcript_name=HG002_chrY_T0001332;gene_name=FAM224B;ID=HG002_chrY_T0001332;Name=FAM224B
HG002_chrY	CAT	exon	18459617	18460277	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=HG002_chrY_T0001332;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001332;transcript_name=HG002_chrY_T0001332;gene_name=FAM224B;ID=exon:HG002_chrY_T0001332:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18460278	18460364	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=HG002_chrY_T0001332;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001332;transcript_name=HG002_chrY_T0001332;gene_name=FAM224B;ID=intron:HG002_chrY_T0001332:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18460365	18460449	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=HG002_chrY_T0001332;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001332;transcript_name=HG002_chrY_T0001332;gene_name=FAM224B;ID=exon:HG002_chrY_T0001332:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18460450	18483029	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=HG002_chrY_T0001332;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001332;transcript_name=HG002_chrY_T0001332;gene_name=FAM224B;ID=intron:HG002_chrY_T0001332:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18483030	18483147	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=HG002_chrY_T0001332;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001332;transcript_name=HG002_chrY_T0001332;gene_name=FAM224B;ID=exon:HG002_chrY_T0001332:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18483148	18485647	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=HG002_chrY_T0001332;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001332;transcript_name=HG002_chrY_T0001332;gene_name=FAM224B;ID=intron:HG002_chrY_T0001332:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485648	18485807	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=HG002_chrY_T0001332;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001332;transcript_name=HG002_chrY_T0001332;gene_name=FAM224B;ID=exon:HG002_chrY_T0001332:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18485808	18485997	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=HG002_chrY_T0001332;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001332;transcript_name=HG002_chrY_T0001332;gene_name=FAM224B;ID=intron:HG002_chrY_T0001332:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485998	18486206	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=HG002_chrY_T0001332;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001332;transcript_name=HG002_chrY_T0001332;gene_name=FAM224B;ID=exon:HG002_chrY_T0001332:4;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18459617	18486143	1000	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1;transcript_id=HG002_chrY_T0001333;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_G0000447;transcript_name=HG002_chrY_T0001333;gene_name=FAM224B;ID=HG002_chrY_T0001333;Name=FAM224B
HG002_chrY	CAT	exon	18459617	18460277	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1;transcript_id=HG002_chrY_T0001333;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001333;transcript_name=HG002_chrY_T0001333;gene_name=FAM224B;ID=exon:HG002_chrY_T0001333:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18460278	18460364	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1;transcript_id=HG002_chrY_T0001333;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001333;transcript_name=HG002_chrY_T0001333;gene_name=FAM224B;ID=intron:HG002_chrY_T0001333:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18460365	18460449	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1;transcript_id=HG002_chrY_T0001333;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001333;transcript_name=HG002_chrY_T0001333;gene_name=FAM224B;ID=exon:HG002_chrY_T0001333:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18460450	18483029	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1;transcript_id=HG002_chrY_T0001333;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001333;transcript_name=HG002_chrY_T0001333;gene_name=FAM224B;ID=intron:HG002_chrY_T0001333:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18483030	18483119	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1;transcript_id=HG002_chrY_T0001333;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001333;transcript_name=HG002_chrY_T0001333;gene_name=FAM224B;ID=exon:HG002_chrY_T0001333:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18483120	18485647	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1;transcript_id=HG002_chrY_T0001333;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001333;transcript_name=HG002_chrY_T0001333;gene_name=FAM224B;ID=intron:HG002_chrY_T0001333:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485648	18486143	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1;transcript_id=HG002_chrY_T0001333;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001333;transcript_name=HG002_chrY_T0001333;gene_name=FAM224B;ID=exon:HG002_chrY_T0001333:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18459617	18486128	1000	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG002_chrY_T0001334;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_G0000447;transcript_name=HG002_chrY_T0001334;gene_name=FAM224B;ID=HG002_chrY_T0001334;Name=FAM224B
HG002_chrY	CAT	exon	18459617	18459676	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG002_chrY_T0001334;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001334;transcript_name=HG002_chrY_T0001334;gene_name=FAM224B;ID=exon:HG002_chrY_T0001334:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18459677	18460150	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG002_chrY_T0001334;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001334;transcript_name=HG002_chrY_T0001334;gene_name=FAM224B;ID=intron:HG002_chrY_T0001334:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18460151	18460277	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG002_chrY_T0001334;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001334;transcript_name=HG002_chrY_T0001334;gene_name=FAM224B;ID=exon:HG002_chrY_T0001334:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18460278	18460364	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG002_chrY_T0001334;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001334;transcript_name=HG002_chrY_T0001334;gene_name=FAM224B;ID=intron:HG002_chrY_T0001334:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18460365	18460449	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG002_chrY_T0001334;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001334;transcript_name=HG002_chrY_T0001334;gene_name=FAM224B;ID=exon:HG002_chrY_T0001334:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18460450	18483029	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG002_chrY_T0001334;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001334;transcript_name=HG002_chrY_T0001334;gene_name=FAM224B;ID=intron:HG002_chrY_T0001334:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18483030	18483147	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG002_chrY_T0001334;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001334;transcript_name=HG002_chrY_T0001334;gene_name=FAM224B;ID=exon:HG002_chrY_T0001334:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18483148	18485647	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG002_chrY_T0001334;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001334;transcript_name=HG002_chrY_T0001334;gene_name=FAM224B;ID=intron:HG002_chrY_T0001334:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485648	18485807	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG002_chrY_T0001334;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001334;transcript_name=HG002_chrY_T0001334;gene_name=FAM224B;ID=exon:HG002_chrY_T0001334:4;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18485808	18485997	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG002_chrY_T0001334;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001334;transcript_name=HG002_chrY_T0001334;gene_name=FAM224B;ID=intron:HG002_chrY_T0001334:4;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485998	18486128	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG002_chrY_T0001334;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001334;transcript_name=HG002_chrY_T0001334;gene_name=FAM224B;ID=exon:HG002_chrY_T0001334:5;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18459619	18486167	1000	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG002_chrY_T0001335;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_G0000447;transcript_name=HG002_chrY_T0001335;gene_name=FAM224B;ID=HG002_chrY_T0001335;Name=FAM224B
HG002_chrY	CAT	exon	18459619	18460277	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG002_chrY_T0001335;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001335;transcript_name=HG002_chrY_T0001335;gene_name=FAM224B;ID=exon:HG002_chrY_T0001335:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18460278	18460364	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG002_chrY_T0001335;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001335;transcript_name=HG002_chrY_T0001335;gene_name=FAM224B;ID=intron:HG002_chrY_T0001335:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18460365	18460449	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG002_chrY_T0001335;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001335;transcript_name=HG002_chrY_T0001335;gene_name=FAM224B;ID=exon:HG002_chrY_T0001335:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18460450	18481564	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG002_chrY_T0001335;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001335;transcript_name=HG002_chrY_T0001335;gene_name=FAM224B;ID=intron:HG002_chrY_T0001335:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18481565	18481694	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG002_chrY_T0001335;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001335;transcript_name=HG002_chrY_T0001335;gene_name=FAM224B;ID=exon:HG002_chrY_T0001335:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18481695	18483029	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG002_chrY_T0001335;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001335;transcript_name=HG002_chrY_T0001335;gene_name=FAM224B;ID=intron:HG002_chrY_T0001335:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18483030	18483147	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG002_chrY_T0001335;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001335;transcript_name=HG002_chrY_T0001335;gene_name=FAM224B;ID=exon:HG002_chrY_T0001335:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18483148	18485647	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG002_chrY_T0001335;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001335;transcript_name=HG002_chrY_T0001335;gene_name=FAM224B;ID=intron:HG002_chrY_T0001335:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485648	18485807	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG002_chrY_T0001335;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001335;transcript_name=HG002_chrY_T0001335;gene_name=FAM224B;ID=exon:HG002_chrY_T0001335:4;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18485808	18485997	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG002_chrY_T0001335;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001335;transcript_name=HG002_chrY_T0001335;gene_name=FAM224B;ID=intron:HG002_chrY_T0001335:4;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485998	18486167	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG002_chrY_T0001335;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001335;transcript_name=HG002_chrY_T0001335;gene_name=FAM224B;ID=exon:HG002_chrY_T0001335:5;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18459622	18486186	1000	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=HG002_chrY_T0001336;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_G0000447;transcript_name=HG002_chrY_T0001336;gene_name=FAM224B;ID=HG002_chrY_T0001336;Name=FAM224B
HG002_chrY	CAT	exon	18459622	18459676	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=HG002_chrY_T0001336;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001336;transcript_name=HG002_chrY_T0001336;gene_name=FAM224B;ID=exon:HG002_chrY_T0001336:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18459677	18460150	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=HG002_chrY_T0001336;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001336;transcript_name=HG002_chrY_T0001336;gene_name=FAM224B;ID=intron:HG002_chrY_T0001336:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18460151	18460277	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=HG002_chrY_T0001336;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001336;transcript_name=HG002_chrY_T0001336;gene_name=FAM224B;ID=exon:HG002_chrY_T0001336:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18460278	18460364	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=HG002_chrY_T0001336;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001336;transcript_name=HG002_chrY_T0001336;gene_name=FAM224B;ID=intron:HG002_chrY_T0001336:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18460365	18460449	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=HG002_chrY_T0001336;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001336;transcript_name=HG002_chrY_T0001336;gene_name=FAM224B;ID=exon:HG002_chrY_T0001336:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18460450	18483029	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=HG002_chrY_T0001336;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001336;transcript_name=HG002_chrY_T0001336;gene_name=FAM224B;ID=intron:HG002_chrY_T0001336:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18483030	18483147	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=HG002_chrY_T0001336;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001336;transcript_name=HG002_chrY_T0001336;gene_name=FAM224B;ID=exon:HG002_chrY_T0001336:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18483148	18485647	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=HG002_chrY_T0001336;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001336;transcript_name=HG002_chrY_T0001336;gene_name=FAM224B;ID=intron:HG002_chrY_T0001336:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485648	18486186	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=HG002_chrY_T0001336;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001336;transcript_name=HG002_chrY_T0001336;gene_name=FAM224B;ID=exon:HG002_chrY_T0001336:4;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18459889	18486136	1000	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG002_chrY_T0001337;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_G0000447;transcript_name=HG002_chrY_T0001337;gene_name=FAM224B;ID=HG002_chrY_T0001337;Name=FAM224B
HG002_chrY	CAT	exon	18459889	18460277	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG002_chrY_T0001337;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001337;transcript_name=HG002_chrY_T0001337;gene_name=FAM224B;ID=exon:HG002_chrY_T0001337:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18460278	18460364	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG002_chrY_T0001337;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001337;transcript_name=HG002_chrY_T0001337;gene_name=FAM224B;ID=intron:HG002_chrY_T0001337:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18460365	18460449	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG002_chrY_T0001337;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001337;transcript_name=HG002_chrY_T0001337;gene_name=FAM224B;ID=exon:HG002_chrY_T0001337:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18460450	18481564	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG002_chrY_T0001337;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001337;transcript_name=HG002_chrY_T0001337;gene_name=FAM224B;ID=intron:HG002_chrY_T0001337:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18481565	18481694	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG002_chrY_T0001337;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001337;transcript_name=HG002_chrY_T0001337;gene_name=FAM224B;ID=exon:HG002_chrY_T0001337:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18481695	18483029	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG002_chrY_T0001337;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001337;transcript_name=HG002_chrY_T0001337;gene_name=FAM224B;ID=intron:HG002_chrY_T0001337:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18483030	18483147	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG002_chrY_T0001337;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001337;transcript_name=HG002_chrY_T0001337;gene_name=FAM224B;ID=exon:HG002_chrY_T0001337:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18483148	18484001	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG002_chrY_T0001337;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001337;transcript_name=HG002_chrY_T0001337;gene_name=FAM224B;ID=intron:HG002_chrY_T0001337:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18484002	18484099	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG002_chrY_T0001337;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001337;transcript_name=HG002_chrY_T0001337;gene_name=FAM224B;ID=exon:HG002_chrY_T0001337:4;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18484100	18485997	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG002_chrY_T0001337;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001337;transcript_name=HG002_chrY_T0001337;gene_name=FAM224B;ID=intron:HG002_chrY_T0001337:4;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485998	18486136	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG002_chrY_T0001337;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001337;transcript_name=HG002_chrY_T0001337;gene_name=FAM224B;ID=exon:HG002_chrY_T0001337:5;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18459891	18486142	1000	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=HG002_chrY_T0001338;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_G0000447;transcript_name=HG002_chrY_T0001338;gene_name=FAM224B;ID=HG002_chrY_T0001338;Name=FAM224B
HG002_chrY	CAT	exon	18459891	18460277	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=HG002_chrY_T0001338;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001338;transcript_name=HG002_chrY_T0001338;gene_name=FAM224B;ID=exon:HG002_chrY_T0001338:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18460278	18460364	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=HG002_chrY_T0001338;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001338;transcript_name=HG002_chrY_T0001338;gene_name=FAM224B;ID=intron:HG002_chrY_T0001338:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18460365	18460449	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=HG002_chrY_T0001338;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001338;transcript_name=HG002_chrY_T0001338;gene_name=FAM224B;ID=exon:HG002_chrY_T0001338:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18460450	18483029	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=HG002_chrY_T0001338;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001338;transcript_name=HG002_chrY_T0001338;gene_name=FAM224B;ID=intron:HG002_chrY_T0001338:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18483030	18483147	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=HG002_chrY_T0001338;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001338;transcript_name=HG002_chrY_T0001338;gene_name=FAM224B;ID=exon:HG002_chrY_T0001338:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18483148	18485647	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=HG002_chrY_T0001338;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001338;transcript_name=HG002_chrY_T0001338;gene_name=FAM224B;ID=intron:HG002_chrY_T0001338:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485648	18485881	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=HG002_chrY_T0001338;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001338;transcript_name=HG002_chrY_T0001338;gene_name=FAM224B;ID=exon:HG002_chrY_T0001338:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18485882	18485997	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=HG002_chrY_T0001338;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001338;transcript_name=HG002_chrY_T0001338;gene_name=FAM224B;ID=intron:HG002_chrY_T0001338:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485998	18486142	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=HG002_chrY_T0001338;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001338;transcript_name=HG002_chrY_T0001338;gene_name=FAM224B;ID=exon:HG002_chrY_T0001338:4;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18459894	18485982	1000	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=HG002_chrY_T0001339;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_G0000447;transcript_name=HG002_chrY_T0001339;gene_name=FAM224B;ID=HG002_chrY_T0001339;Name=FAM224B
HG002_chrY	CAT	exon	18459894	18460277	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=HG002_chrY_T0001339;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001339;transcript_name=HG002_chrY_T0001339;gene_name=FAM224B;ID=exon:HG002_chrY_T0001339:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18460278	18460364	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=HG002_chrY_T0001339;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001339;transcript_name=HG002_chrY_T0001339;gene_name=FAM224B;ID=intron:HG002_chrY_T0001339:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18460365	18460449	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=HG002_chrY_T0001339;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001339;transcript_name=HG002_chrY_T0001339;gene_name=FAM224B;ID=exon:HG002_chrY_T0001339:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18460450	18477723	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=HG002_chrY_T0001339;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001339;transcript_name=HG002_chrY_T0001339;gene_name=FAM224B;ID=intron:HG002_chrY_T0001339:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18477724	18477780	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=HG002_chrY_T0001339;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001339;transcript_name=HG002_chrY_T0001339;gene_name=FAM224B;ID=exon:HG002_chrY_T0001339:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18477781	18483029	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=HG002_chrY_T0001339;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001339;transcript_name=HG002_chrY_T0001339;gene_name=FAM224B;ID=intron:HG002_chrY_T0001339:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18483030	18483147	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=HG002_chrY_T0001339;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001339;transcript_name=HG002_chrY_T0001339;gene_name=FAM224B;ID=exon:HG002_chrY_T0001339:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18483148	18485647	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=HG002_chrY_T0001339;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001339;transcript_name=HG002_chrY_T0001339;gene_name=FAM224B;ID=intron:HG002_chrY_T0001339:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485648	18485982	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=HG002_chrY_T0001339;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001339;transcript_name=HG002_chrY_T0001339;gene_name=FAM224B;ID=exon:HG002_chrY_T0001339:4;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18459905	18486186	1000	-	.	source_transcript=ENST00000729292.1;source_transcript_name=FAM224B-211;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729292.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729292.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729292.1;transcript_id=HG002_chrY_T0001340;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_G0000447;transcript_name=HG002_chrY_T0001340;gene_name=FAM224B;ID=HG002_chrY_T0001340;Name=FAM224B
HG002_chrY	CAT	exon	18459905	18460277	.	-	.	source_transcript=ENST00000729292.1;source_transcript_name=FAM224B-211;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729292.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729292.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729292.1;transcript_id=HG002_chrY_T0001340;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001340;transcript_name=HG002_chrY_T0001340;gene_name=FAM224B;ID=exon:HG002_chrY_T0001340:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18460278	18460364	.	-	.	source_transcript=ENST00000729292.1;source_transcript_name=FAM224B-211;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729292.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729292.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729292.1;transcript_id=HG002_chrY_T0001340;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001340;transcript_name=HG002_chrY_T0001340;gene_name=FAM224B;ID=intron:HG002_chrY_T0001340:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18460365	18460449	.	-	.	source_transcript=ENST00000729292.1;source_transcript_name=FAM224B-211;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729292.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729292.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729292.1;transcript_id=HG002_chrY_T0001340;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001340;transcript_name=HG002_chrY_T0001340;gene_name=FAM224B;ID=exon:HG002_chrY_T0001340:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18460450	18485997	.	-	.	source_transcript=ENST00000729292.1;source_transcript_name=FAM224B-211;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729292.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729292.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729292.1;transcript_id=HG002_chrY_T0001340;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001340;transcript_name=HG002_chrY_T0001340;gene_name=FAM224B;ID=intron:HG002_chrY_T0001340:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485998	18486186	.	-	.	source_transcript=ENST00000729292.1;source_transcript_name=FAM224B-211;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729292.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729292.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729292.1;transcript_id=HG002_chrY_T0001340;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001340;transcript_name=HG002_chrY_T0001340;gene_name=FAM224B;ID=exon:HG002_chrY_T0001340:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18480670	18486197	1000	-	.	source_transcript=ENST00000729296.1;source_transcript_name=FAM224B-215;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729296.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729296.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729296.1;transcript_id=HG002_chrY_T0001344;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_G0000447;transcript_name=HG002_chrY_T0001344;gene_name=FAM224B;ID=HG002_chrY_T0001344;Name=FAM224B
HG002_chrY	CAT	exon	18480670	18481694	.	-	.	source_transcript=ENST00000729296.1;source_transcript_name=FAM224B-215;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729296.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729296.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729296.1;transcript_id=HG002_chrY_T0001344;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001344;transcript_name=HG002_chrY_T0001344;gene_name=FAM224B;ID=exon:HG002_chrY_T0001344:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18481695	18483029	.	-	.	source_transcript=ENST00000729296.1;source_transcript_name=FAM224B-215;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729296.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729296.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729296.1;transcript_id=HG002_chrY_T0001344;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001344;transcript_name=HG002_chrY_T0001344;gene_name=FAM224B;ID=intron:HG002_chrY_T0001344:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18483030	18483147	.	-	.	source_transcript=ENST00000729296.1;source_transcript_name=FAM224B-215;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729296.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729296.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729296.1;transcript_id=HG002_chrY_T0001344;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001344;transcript_name=HG002_chrY_T0001344;gene_name=FAM224B;ID=exon:HG002_chrY_T0001344:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18483148	18485647	.	-	.	source_transcript=ENST00000729296.1;source_transcript_name=FAM224B-215;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729296.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729296.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729296.1;transcript_id=HG002_chrY_T0001344;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001344;transcript_name=HG002_chrY_T0001344;gene_name=FAM224B;ID=intron:HG002_chrY_T0001344:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485648	18486197	.	-	.	source_transcript=ENST00000729296.1;source_transcript_name=FAM224B-215;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729296.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729296.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729296.1;transcript_id=HG002_chrY_T0001344;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001344;transcript_name=HG002_chrY_T0001344;gene_name=FAM224B;ID=exon:HG002_chrY_T0001344:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18481454	18486292	1000	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1;transcript_id=HG002_chrY_T0001345;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_G0000447;transcript_name=HG002_chrY_T0001345;gene_name=FAM224B;ID=HG002_chrY_T0001345;Name=FAM224B
HG002_chrY	CAT	exon	18481454	18481694	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1;transcript_id=HG002_chrY_T0001345;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001345;transcript_name=HG002_chrY_T0001345;gene_name=FAM224B;ID=exon:HG002_chrY_T0001345:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18481695	18483029	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1;transcript_id=HG002_chrY_T0001345;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001345;transcript_name=HG002_chrY_T0001345;gene_name=FAM224B;ID=intron:HG002_chrY_T0001345:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18483030	18483147	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1;transcript_id=HG002_chrY_T0001345;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001345;transcript_name=HG002_chrY_T0001345;gene_name=FAM224B;ID=exon:HG002_chrY_T0001345:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18483148	18485647	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1;transcript_id=HG002_chrY_T0001345;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001345;transcript_name=HG002_chrY_T0001345;gene_name=FAM224B;ID=intron:HG002_chrY_T0001345:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485648	18485807	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1;transcript_id=HG002_chrY_T0001345;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001345;transcript_name=HG002_chrY_T0001345;gene_name=FAM224B;ID=exon:HG002_chrY_T0001345:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18485808	18485997	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1;transcript_id=HG002_chrY_T0001345;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001345;transcript_name=HG002_chrY_T0001345;gene_name=FAM224B;ID=intron:HG002_chrY_T0001345:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485998	18486292	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1;transcript_id=HG002_chrY_T0001345;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001345;transcript_name=HG002_chrY_T0001345;gene_name=FAM224B;ID=exon:HG002_chrY_T0001345:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18481470	18486204	1000	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1;transcript_id=HG002_chrY_T0001346;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_G0000447;transcript_name=HG002_chrY_T0001346;gene_name=FAM224B;ID=HG002_chrY_T0001346;Name=FAM224B
HG002_chrY	CAT	exon	18481470	18481694	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1;transcript_id=HG002_chrY_T0001346;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001346;transcript_name=HG002_chrY_T0001346;gene_name=FAM224B;ID=exon:HG002_chrY_T0001346:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18481695	18483029	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1;transcript_id=HG002_chrY_T0001346;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001346;transcript_name=HG002_chrY_T0001346;gene_name=FAM224B;ID=intron:HG002_chrY_T0001346:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18483030	18483147	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1;transcript_id=HG002_chrY_T0001346;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001346;transcript_name=HG002_chrY_T0001346;gene_name=FAM224B;ID=exon:HG002_chrY_T0001346:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18483148	18485647	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1;transcript_id=HG002_chrY_T0001346;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001346;transcript_name=HG002_chrY_T0001346;gene_name=FAM224B;ID=intron:HG002_chrY_T0001346:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485648	18485881	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1;transcript_id=HG002_chrY_T0001346;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001346;transcript_name=HG002_chrY_T0001346;gene_name=FAM224B;ID=exon:HG002_chrY_T0001346:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18485882	18485997	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1;transcript_id=HG002_chrY_T0001346;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001346;transcript_name=HG002_chrY_T0001346;gene_name=FAM224B;ID=intron:HG002_chrY_T0001346:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485998	18486204	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1;transcript_id=HG002_chrY_T0001346;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001346;transcript_name=HG002_chrY_T0001346;gene_name=FAM224B;ID=exon:HG002_chrY_T0001346:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18481470	18486186	1000	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1;transcript_id=HG002_chrY_T0001347;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_G0000447;transcript_name=HG002_chrY_T0001347;gene_name=FAM224B;ID=HG002_chrY_T0001347;Name=FAM224B
HG002_chrY	CAT	exon	18481470	18481694	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1;transcript_id=HG002_chrY_T0001347;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001347;transcript_name=HG002_chrY_T0001347;gene_name=FAM224B;ID=exon:HG002_chrY_T0001347:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18481695	18483029	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1;transcript_id=HG002_chrY_T0001347;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001347;transcript_name=HG002_chrY_T0001347;gene_name=FAM224B;ID=intron:HG002_chrY_T0001347:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18483030	18483119	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1;transcript_id=HG002_chrY_T0001347;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001347;transcript_name=HG002_chrY_T0001347;gene_name=FAM224B;ID=exon:HG002_chrY_T0001347:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18483120	18485647	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1;transcript_id=HG002_chrY_T0001347;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001347;transcript_name=HG002_chrY_T0001347;gene_name=FAM224B;ID=intron:HG002_chrY_T0001347:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485648	18485807	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1;transcript_id=HG002_chrY_T0001347;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001347;transcript_name=HG002_chrY_T0001347;gene_name=FAM224B;ID=exon:HG002_chrY_T0001347:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18485808	18485997	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1;transcript_id=HG002_chrY_T0001347;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001347;transcript_name=HG002_chrY_T0001347;gene_name=FAM224B;ID=intron:HG002_chrY_T0001347:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485998	18486186	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1;transcript_id=HG002_chrY_T0001347;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001347;transcript_name=HG002_chrY_T0001347;gene_name=FAM224B;ID=exon:HG002_chrY_T0001347:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18481484	18486201	1000	-	.	source_transcript=ENST00000729299.1;source_transcript_name=FAM224B-218;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729299.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729299.1;transcript_id=HG002_chrY_T0001348;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_G0000447;transcript_name=HG002_chrY_T0001348;gene_name=FAM224B;ID=HG002_chrY_T0001348;Name=FAM224B
HG002_chrY	CAT	exon	18481484	18481694	.	-	.	source_transcript=ENST00000729299.1;source_transcript_name=FAM224B-218;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729299.1;transcript_id=HG002_chrY_T0001348;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001348;transcript_name=HG002_chrY_T0001348;gene_name=FAM224B;ID=exon:HG002_chrY_T0001348:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18481695	18483029	.	-	.	source_transcript=ENST00000729299.1;source_transcript_name=FAM224B-218;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729299.1;transcript_id=HG002_chrY_T0001348;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001348;transcript_name=HG002_chrY_T0001348;gene_name=FAM224B;ID=intron:HG002_chrY_T0001348:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18483030	18483147	.	-	.	source_transcript=ENST00000729299.1;source_transcript_name=FAM224B-218;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729299.1;transcript_id=HG002_chrY_T0001348;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001348;transcript_name=HG002_chrY_T0001348;gene_name=FAM224B;ID=exon:HG002_chrY_T0001348:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18483148	18485997	.	-	.	source_transcript=ENST00000729299.1;source_transcript_name=FAM224B-218;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729299.1;transcript_id=HG002_chrY_T0001348;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001348;transcript_name=HG002_chrY_T0001348;gene_name=FAM224B;ID=intron:HG002_chrY_T0001348:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485998	18486201	.	-	.	source_transcript=ENST00000729299.1;source_transcript_name=FAM224B-218;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729299.1;transcript_id=HG002_chrY_T0001348;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001348;transcript_name=HG002_chrY_T0001348;gene_name=FAM224B;ID=exon:HG002_chrY_T0001348:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18481488	18486158	1000	-	.	source_transcript=ENST00000729305.1;source_transcript_name=FAM224B-224;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729305.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729305.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729305.1;transcript_id=HG002_chrY_T0001349;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_G0000447;transcript_name=HG002_chrY_T0001349;gene_name=FAM224B;ID=HG002_chrY_T0001349;Name=FAM224B
HG002_chrY	CAT	exon	18481488	18481694	.	-	.	source_transcript=ENST00000729305.1;source_transcript_name=FAM224B-224;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729305.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729305.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729305.1;transcript_id=HG002_chrY_T0001349;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001349;transcript_name=HG002_chrY_T0001349;gene_name=FAM224B;ID=exon:HG002_chrY_T0001349:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18481695	18483029	.	-	.	source_transcript=ENST00000729305.1;source_transcript_name=FAM224B-224;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729305.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729305.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729305.1;transcript_id=HG002_chrY_T0001349;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001349;transcript_name=HG002_chrY_T0001349;gene_name=FAM224B;ID=intron:HG002_chrY_T0001349:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18483030	18483119	.	-	.	source_transcript=ENST00000729305.1;source_transcript_name=FAM224B-224;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729305.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729305.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729305.1;transcript_id=HG002_chrY_T0001349;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001349;transcript_name=HG002_chrY_T0001349;gene_name=FAM224B;ID=exon:HG002_chrY_T0001349:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18483120	18485647	.	-	.	source_transcript=ENST00000729305.1;source_transcript_name=FAM224B-224;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729305.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729305.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729305.1;transcript_id=HG002_chrY_T0001349;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001349;transcript_name=HG002_chrY_T0001349;gene_name=FAM224B;ID=intron:HG002_chrY_T0001349:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485648	18486158	.	-	.	source_transcript=ENST00000729305.1;source_transcript_name=FAM224B-224;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729305.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729305.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729305.1;transcript_id=HG002_chrY_T0001349;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001349;transcript_name=HG002_chrY_T0001349;gene_name=FAM224B;ID=exon:HG002_chrY_T0001349:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18481488	18486143	1000	-	.	source_transcript=ENST00000729306.1;source_transcript_name=FAM224B-225;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729306.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729306.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729306.1;transcript_id=HG002_chrY_T0001350;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_G0000447;transcript_name=HG002_chrY_T0001350;gene_name=FAM224B;ID=HG002_chrY_T0001350;Name=FAM224B
HG002_chrY	CAT	exon	18481488	18481694	.	-	.	source_transcript=ENST00000729306.1;source_transcript_name=FAM224B-225;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729306.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729306.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729306.1;transcript_id=HG002_chrY_T0001350;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001350;transcript_name=HG002_chrY_T0001350;gene_name=FAM224B;ID=exon:HG002_chrY_T0001350:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18481695	18483029	.	-	.	source_transcript=ENST00000729306.1;source_transcript_name=FAM224B-225;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729306.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729306.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729306.1;transcript_id=HG002_chrY_T0001350;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001350;transcript_name=HG002_chrY_T0001350;gene_name=FAM224B;ID=intron:HG002_chrY_T0001350:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18483030	18484099	.	-	.	source_transcript=ENST00000729306.1;source_transcript_name=FAM224B-225;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729306.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729306.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729306.1;transcript_id=HG002_chrY_T0001350;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001350;transcript_name=HG002_chrY_T0001350;gene_name=FAM224B;ID=exon:HG002_chrY_T0001350:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18484100	18485647	.	-	.	source_transcript=ENST00000729306.1;source_transcript_name=FAM224B-225;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729306.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729306.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729306.1;transcript_id=HG002_chrY_T0001350;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001350;transcript_name=HG002_chrY_T0001350;gene_name=FAM224B;ID=intron:HG002_chrY_T0001350:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485648	18486143	.	-	.	source_transcript=ENST00000729306.1;source_transcript_name=FAM224B-225;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729306.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729306.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729306.1;transcript_id=HG002_chrY_T0001350;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001350;transcript_name=HG002_chrY_T0001350;gene_name=FAM224B;ID=exon:HG002_chrY_T0001350:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18481492	18486175	1000	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1;transcript_id=HG002_chrY_T0001351;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_G0000447;transcript_name=HG002_chrY_T0001351;gene_name=FAM224B;ID=HG002_chrY_T0001351;Name=FAM224B
HG002_chrY	CAT	exon	18481492	18481694	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1;transcript_id=HG002_chrY_T0001351;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001351;transcript_name=HG002_chrY_T0001351;gene_name=FAM224B;ID=exon:HG002_chrY_T0001351:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18481695	18483029	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1;transcript_id=HG002_chrY_T0001351;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001351;transcript_name=HG002_chrY_T0001351;gene_name=FAM224B;ID=intron:HG002_chrY_T0001351:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18483030	18483147	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1;transcript_id=HG002_chrY_T0001351;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001351;transcript_name=HG002_chrY_T0001351;gene_name=FAM224B;ID=exon:HG002_chrY_T0001351:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18483148	18484001	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1;transcript_id=HG002_chrY_T0001351;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001351;transcript_name=HG002_chrY_T0001351;gene_name=FAM224B;ID=intron:HG002_chrY_T0001351:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18484002	18484099	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1;transcript_id=HG002_chrY_T0001351;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001351;transcript_name=HG002_chrY_T0001351;gene_name=FAM224B;ID=exon:HG002_chrY_T0001351:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18484100	18485997	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1;transcript_id=HG002_chrY_T0001351;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001351;transcript_name=HG002_chrY_T0001351;gene_name=FAM224B;ID=intron:HG002_chrY_T0001351:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485998	18486175	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1;transcript_id=HG002_chrY_T0001351;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001351;transcript_name=HG002_chrY_T0001351;gene_name=FAM224B;ID=exon:HG002_chrY_T0001351:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18481503	18486184	1000	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1;transcript_id=HG002_chrY_T0001352;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_G0000447;transcript_name=HG002_chrY_T0001352;gene_name=FAM224B;ID=HG002_chrY_T0001352;Name=FAM224B
HG002_chrY	CAT	exon	18481503	18481694	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1;transcript_id=HG002_chrY_T0001352;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001352;transcript_name=HG002_chrY_T0001352;gene_name=FAM224B;ID=exon:HG002_chrY_T0001352:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18481695	18483029	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1;transcript_id=HG002_chrY_T0001352;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001352;transcript_name=HG002_chrY_T0001352;gene_name=FAM224B;ID=intron:HG002_chrY_T0001352:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18483030	18483147	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1;transcript_id=HG002_chrY_T0001352;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001352;transcript_name=HG002_chrY_T0001352;gene_name=FAM224B;ID=exon:HG002_chrY_T0001352:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18483148	18485647	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1;transcript_id=HG002_chrY_T0001352;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001352;transcript_name=HG002_chrY_T0001352;gene_name=FAM224B;ID=intron:HG002_chrY_T0001352:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485648	18485783	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1;transcript_id=HG002_chrY_T0001352;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001352;transcript_name=HG002_chrY_T0001352;gene_name=FAM224B;ID=exon:HG002_chrY_T0001352:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18485784	18485997	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1;transcript_id=HG002_chrY_T0001352;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001352;transcript_name=HG002_chrY_T0001352;gene_name=FAM224B;ID=intron:HG002_chrY_T0001352:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485998	18486184	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1;transcript_id=HG002_chrY_T0001352;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001352;transcript_name=HG002_chrY_T0001352;gene_name=FAM224B;ID=exon:HG002_chrY_T0001352:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18481507	18486195	1000	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=HG002_chrY_T0001353;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_G0000447;transcript_name=HG002_chrY_T0001353;gene_name=FAM224B;ID=HG002_chrY_T0001353;Name=FAM224B
HG002_chrY	CAT	exon	18481507	18481694	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=HG002_chrY_T0001353;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001353;transcript_name=HG002_chrY_T0001353;gene_name=FAM224B;ID=exon:HG002_chrY_T0001353:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18481695	18483029	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=HG002_chrY_T0001353;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001353;transcript_name=HG002_chrY_T0001353;gene_name=FAM224B;ID=intron:HG002_chrY_T0001353:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18483030	18483147	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=HG002_chrY_T0001353;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001353;transcript_name=HG002_chrY_T0001353;gene_name=FAM224B;ID=exon:HG002_chrY_T0001353:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18483148	18484001	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=HG002_chrY_T0001353;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001353;transcript_name=HG002_chrY_T0001353;gene_name=FAM224B;ID=intron:HG002_chrY_T0001353:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18484002	18484099	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=HG002_chrY_T0001353;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001353;transcript_name=HG002_chrY_T0001353;gene_name=FAM224B;ID=exon:HG002_chrY_T0001353:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18484100	18485647	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=HG002_chrY_T0001353;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001353;transcript_name=HG002_chrY_T0001353;gene_name=FAM224B;ID=intron:HG002_chrY_T0001353:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485648	18485807	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=HG002_chrY_T0001353;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001353;transcript_name=HG002_chrY_T0001353;gene_name=FAM224B;ID=exon:HG002_chrY_T0001353:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18485808	18485997	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=HG002_chrY_T0001353;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001353;transcript_name=HG002_chrY_T0001353;gene_name=FAM224B;ID=intron:HG002_chrY_T0001353:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485998	18486195	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=HG002_chrY_T0001353;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001353;transcript_name=HG002_chrY_T0001353;gene_name=FAM224B;ID=exon:HG002_chrY_T0001353:4;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18481507	18486136	1000	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1;transcript_id=HG002_chrY_T0001354;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_G0000447;transcript_name=HG002_chrY_T0001354;gene_name=FAM224B;ID=HG002_chrY_T0001354;Name=FAM224B
HG002_chrY	CAT	exon	18481507	18481694	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1;transcript_id=HG002_chrY_T0001354;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001354;transcript_name=HG002_chrY_T0001354;gene_name=FAM224B;ID=exon:HG002_chrY_T0001354:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18481695	18483029	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1;transcript_id=HG002_chrY_T0001354;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001354;transcript_name=HG002_chrY_T0001354;gene_name=FAM224B;ID=intron:HG002_chrY_T0001354:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18483030	18483147	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1;transcript_id=HG002_chrY_T0001354;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001354;transcript_name=HG002_chrY_T0001354;gene_name=FAM224B;ID=exon:HG002_chrY_T0001354:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18483148	18485647	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1;transcript_id=HG002_chrY_T0001354;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001354;transcript_name=HG002_chrY_T0001354;gene_name=FAM224B;ID=intron:HG002_chrY_T0001354:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485648	18485769	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1;transcript_id=HG002_chrY_T0001354;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001354;transcript_name=HG002_chrY_T0001354;gene_name=FAM224B;ID=exon:HG002_chrY_T0001354:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18485770	18485997	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1;transcript_id=HG002_chrY_T0001354;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001354;transcript_name=HG002_chrY_T0001354;gene_name=FAM224B;ID=intron:HG002_chrY_T0001354:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485998	18486136	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1;transcript_id=HG002_chrY_T0001354;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001354;transcript_name=HG002_chrY_T0001354;gene_name=FAM224B;ID=exon:HG002_chrY_T0001354:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18481509	18486100	1000	-	.	source_transcript=ENST00000729311.1;source_transcript_name=FAM224B-230;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729311.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729311.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729311.1;transcript_id=HG002_chrY_T0001355;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_G0000447;transcript_name=HG002_chrY_T0001355;gene_name=FAM224B;ID=HG002_chrY_T0001355;Name=FAM224B
HG002_chrY	CAT	exon	18481509	18481694	.	-	.	source_transcript=ENST00000729311.1;source_transcript_name=FAM224B-230;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729311.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729311.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729311.1;transcript_id=HG002_chrY_T0001355;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001355;transcript_name=HG002_chrY_T0001355;gene_name=FAM224B;ID=exon:HG002_chrY_T0001355:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18481695	18485647	.	-	.	source_transcript=ENST00000729311.1;source_transcript_name=FAM224B-230;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729311.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729311.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729311.1;transcript_id=HG002_chrY_T0001355;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001355;transcript_name=HG002_chrY_T0001355;gene_name=FAM224B;ID=intron:HG002_chrY_T0001355:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485648	18486100	.	-	.	source_transcript=ENST00000729311.1;source_transcript_name=FAM224B-230;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729311.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729311.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729311.1;transcript_id=HG002_chrY_T0001355;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001355;transcript_name=HG002_chrY_T0001355;gene_name=FAM224B;ID=exon:HG002_chrY_T0001355:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18481511	18486190	1000	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1;transcript_id=HG002_chrY_T0001356;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_G0000447;transcript_name=HG002_chrY_T0001356;gene_name=FAM224B;ID=HG002_chrY_T0001356;Name=FAM224B
HG002_chrY	CAT	exon	18481511	18481694	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1;transcript_id=HG002_chrY_T0001356;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001356;transcript_name=HG002_chrY_T0001356;gene_name=FAM224B;ID=exon:HG002_chrY_T0001356:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18481695	18483029	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1;transcript_id=HG002_chrY_T0001356;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001356;transcript_name=HG002_chrY_T0001356;gene_name=FAM224B;ID=intron:HG002_chrY_T0001356:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18483030	18483147	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1;transcript_id=HG002_chrY_T0001356;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001356;transcript_name=HG002_chrY_T0001356;gene_name=FAM224B;ID=exon:HG002_chrY_T0001356:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18483148	18484001	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1;transcript_id=HG002_chrY_T0001356;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001356;transcript_name=HG002_chrY_T0001356;gene_name=FAM224B;ID=intron:HG002_chrY_T0001356:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18484002	18484099	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1;transcript_id=HG002_chrY_T0001356;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001356;transcript_name=HG002_chrY_T0001356;gene_name=FAM224B;ID=exon:HG002_chrY_T0001356:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18484100	18485647	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1;transcript_id=HG002_chrY_T0001356;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001356;transcript_name=HG002_chrY_T0001356;gene_name=FAM224B;ID=intron:HG002_chrY_T0001356:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485648	18486190	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1;transcript_id=HG002_chrY_T0001356;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001356;transcript_name=HG002_chrY_T0001356;gene_name=FAM224B;ID=exon:HG002_chrY_T0001356:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18481511	18486143	1000	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1;transcript_id=HG002_chrY_T0001357;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_G0000447;transcript_name=HG002_chrY_T0001357;gene_name=FAM224B;ID=HG002_chrY_T0001357;Name=FAM224B
HG002_chrY	CAT	exon	18481511	18481694	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1;transcript_id=HG002_chrY_T0001357;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001357;transcript_name=HG002_chrY_T0001357;gene_name=FAM224B;ID=exon:HG002_chrY_T0001357:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18481695	18483029	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1;transcript_id=HG002_chrY_T0001357;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001357;transcript_name=HG002_chrY_T0001357;gene_name=FAM224B;ID=intron:HG002_chrY_T0001357:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18483030	18484099	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1;transcript_id=HG002_chrY_T0001357;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001357;transcript_name=HG002_chrY_T0001357;gene_name=FAM224B;ID=exon:HG002_chrY_T0001357:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18484100	18485647	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1;transcript_id=HG002_chrY_T0001357;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001357;transcript_name=HG002_chrY_T0001357;gene_name=FAM224B;ID=intron:HG002_chrY_T0001357:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485648	18485807	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1;transcript_id=HG002_chrY_T0001357;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001357;transcript_name=HG002_chrY_T0001357;gene_name=FAM224B;ID=exon:HG002_chrY_T0001357:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18485808	18485997	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1;transcript_id=HG002_chrY_T0001357;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001357;transcript_name=HG002_chrY_T0001357;gene_name=FAM224B;ID=intron:HG002_chrY_T0001357:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485998	18486143	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1;transcript_id=HG002_chrY_T0001357;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001357;transcript_name=HG002_chrY_T0001357;gene_name=FAM224B;ID=exon:HG002_chrY_T0001357:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18481511	18486138	1000	-	.	source_transcript=ENST00000729309.1;source_transcript_name=FAM224B-228;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729309.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729309.1;transcript_id=HG002_chrY_T0001358;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_G0000447;transcript_name=HG002_chrY_T0001358;gene_name=FAM224B;ID=HG002_chrY_T0001358;Name=FAM224B
HG002_chrY	CAT	exon	18481511	18481694	.	-	.	source_transcript=ENST00000729309.1;source_transcript_name=FAM224B-228;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729309.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729309.1;transcript_id=HG002_chrY_T0001358;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001358;transcript_name=HG002_chrY_T0001358;gene_name=FAM224B;ID=exon:HG002_chrY_T0001358:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18481695	18485647	.	-	.	source_transcript=ENST00000729309.1;source_transcript_name=FAM224B-228;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729309.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729309.1;transcript_id=HG002_chrY_T0001358;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001358;transcript_name=HG002_chrY_T0001358;gene_name=FAM224B;ID=intron:HG002_chrY_T0001358:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485648	18485807	.	-	.	source_transcript=ENST00000729309.1;source_transcript_name=FAM224B-228;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729309.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729309.1;transcript_id=HG002_chrY_T0001358;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001358;transcript_name=HG002_chrY_T0001358;gene_name=FAM224B;ID=exon:HG002_chrY_T0001358:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18485808	18485997	.	-	.	source_transcript=ENST00000729309.1;source_transcript_name=FAM224B-228;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729309.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729309.1;transcript_id=HG002_chrY_T0001358;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001358;transcript_name=HG002_chrY_T0001358;gene_name=FAM224B;ID=intron:HG002_chrY_T0001358:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485998	18486138	.	-	.	source_transcript=ENST00000729309.1;source_transcript_name=FAM224B-228;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729309.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729309.1;transcript_id=HG002_chrY_T0001358;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001358;transcript_name=HG002_chrY_T0001358;gene_name=FAM224B;ID=exon:HG002_chrY_T0001358:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18481511	18486137	1000	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1;transcript_id=HG002_chrY_T0001359;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_G0000447;transcript_name=HG002_chrY_T0001359;gene_name=FAM224B;ID=HG002_chrY_T0001359;Name=FAM224B
HG002_chrY	CAT	exon	18481511	18481694	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1;transcript_id=HG002_chrY_T0001359;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001359;transcript_name=HG002_chrY_T0001359;gene_name=FAM224B;ID=exon:HG002_chrY_T0001359:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18481695	18483029	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1;transcript_id=HG002_chrY_T0001359;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001359;transcript_name=HG002_chrY_T0001359;gene_name=FAM224B;ID=intron:HG002_chrY_T0001359:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18483030	18483119	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1;transcript_id=HG002_chrY_T0001359;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001359;transcript_name=HG002_chrY_T0001359;gene_name=FAM224B;ID=exon:HG002_chrY_T0001359:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18483120	18485647	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1;transcript_id=HG002_chrY_T0001359;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001359;transcript_name=HG002_chrY_T0001359;gene_name=FAM224B;ID=intron:HG002_chrY_T0001359:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485648	18485881	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1;transcript_id=HG002_chrY_T0001359;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001359;transcript_name=HG002_chrY_T0001359;gene_name=FAM224B;ID=exon:HG002_chrY_T0001359:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18485882	18485997	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1;transcript_id=HG002_chrY_T0001359;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001359;transcript_name=HG002_chrY_T0001359;gene_name=FAM224B;ID=intron:HG002_chrY_T0001359:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485998	18486137	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1;transcript_id=HG002_chrY_T0001359;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001359;transcript_name=HG002_chrY_T0001359;gene_name=FAM224B;ID=exon:HG002_chrY_T0001359:3;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18482732	18486138	1000	-	.	source_transcript=ENST00000729312.1;source_transcript_name=FAM224B-231;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729312.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729312.1;transcript_id=HG002_chrY_T0001360;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_G0000447;transcript_name=HG002_chrY_T0001360;gene_name=FAM224B;ID=HG002_chrY_T0001360;Name=FAM224B
HG002_chrY	CAT	exon	18482732	18482990	.	-	.	source_transcript=ENST00000729312.1;source_transcript_name=FAM224B-231;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729312.1;transcript_id=HG002_chrY_T0001360;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001360;transcript_name=HG002_chrY_T0001360;gene_name=FAM224B;ID=exon:HG002_chrY_T0001360:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18482991	18485647	.	-	.	source_transcript=ENST00000729312.1;source_transcript_name=FAM224B-231;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729312.1;transcript_id=HG002_chrY_T0001360;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001360;transcript_name=HG002_chrY_T0001360;gene_name=FAM224B;ID=intron:HG002_chrY_T0001360:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485648	18486138	.	-	.	source_transcript=ENST00000729312.1;source_transcript_name=FAM224B-231;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729312.1;transcript_id=HG002_chrY_T0001360;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001360;transcript_name=HG002_chrY_T0001360;gene_name=FAM224B;ID=exon:HG002_chrY_T0001360:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18484063	18486188	1000	-	.	source_transcript=ENST00000729313.1;source_transcript_name=FAM224B-232;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729313.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729313.1;transcript_id=HG002_chrY_T0001361;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_G0000447;transcript_name=HG002_chrY_T0001361;gene_name=FAM224B;ID=HG002_chrY_T0001361;Name=FAM224B
HG002_chrY	CAT	exon	18484063	18484099	.	-	.	source_transcript=ENST00000729313.1;source_transcript_name=FAM224B-232;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729313.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729313.1;transcript_id=HG002_chrY_T0001361;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001361;transcript_name=HG002_chrY_T0001361;gene_name=FAM224B;ID=exon:HG002_chrY_T0001361:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18484100	18485219	.	-	.	source_transcript=ENST00000729313.1;source_transcript_name=FAM224B-232;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729313.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729313.1;transcript_id=HG002_chrY_T0001361;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001361;transcript_name=HG002_chrY_T0001361;gene_name=FAM224B;ID=intron:HG002_chrY_T0001361:0;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485220	18485416	.	-	.	source_transcript=ENST00000729313.1;source_transcript_name=FAM224B-232;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729313.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729313.1;transcript_id=HG002_chrY_T0001361;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001361;transcript_name=HG002_chrY_T0001361;gene_name=FAM224B;ID=exon:HG002_chrY_T0001361:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18485417	18485997	.	-	.	source_transcript=ENST00000729313.1;source_transcript_name=FAM224B-232;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729313.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729313.1;transcript_id=HG002_chrY_T0001361;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001361;transcript_name=HG002_chrY_T0001361;gene_name=FAM224B;ID=intron:HG002_chrY_T0001361:1;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18485998	18486188	.	-	.	source_transcript=ENST00000729313.1;source_transcript_name=FAM224B-232;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729313.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729313.1;transcript_id=HG002_chrY_T0001361;gene_id=HG002_chrY_G0000447;Parent=HG002_chrY_T0001361;transcript_name=HG002_chrY_T0001361;gene_name=FAM224B;ID=exon:HG002_chrY_T0001361:2;Name=FAM224B;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18464186	18464298	.	+	.	source_gene_common_name=RNA5SP523;source_gene=ENSG00000252667.1;alternative_source_transcripts=ENST00000516506.1;gene_id=HG002_chrY_G0000448;gene_biotype=rRNA_pseudogene;gene_name=RNA5SP523;gene_sources=liftoff;ID=HG002_chrY_G0000448;Name=RNA5SP523
HG002_chrY	CAT	transcript	18464186	18464298	1000	+	.	source_transcript=ENST00000516858.1;source_transcript_name=RNA5SP523-201;source_gene=ENSG00000252667.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252667.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516858.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP523;alternative_source_transcripts=ENST00000516506.1;transcript_id=HG002_chrY_T0001341;gene_id=HG002_chrY_G0000448;Parent=HG002_chrY_G0000448;transcript_name=HG002_chrY_T0001341;gene_name=RNA5SP523;ID=HG002_chrY_T0001341;Name=RNA5SP523
HG002_chrY	CAT	exon	18464186	18464298	.	+	.	source_transcript=ENST00000516858.1;source_transcript_name=RNA5SP523-201;source_gene=ENSG00000252667.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252667.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516858.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP523;alternative_source_transcripts=ENST00000516506.1;transcript_id=HG002_chrY_T0001341;gene_id=HG002_chrY_G0000448;Parent=HG002_chrY_T0001341;transcript_name=HG002_chrY_T0001341;gene_name=RNA5SP523;ID=exon:HG002_chrY_T0001341:0;Name=RNA5SP523;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18466096	18466211	.	+	.	source_gene_common_name=RNA5SP522;source_gene=ENSG00000251953.1;alternative_source_transcripts=ENST00000516203.1;gene_id=HG002_chrY_G0000449;gene_biotype=rRNA_pseudogene;gene_name=RNA5SP522;gene_sources=liftoff;ID=HG002_chrY_G0000449;Name=RNA5SP522
HG002_chrY	CAT	transcript	18466096	18466211	1000	+	.	source_transcript=ENST00000516144.1;source_transcript_name=RNA5SP522-201;source_gene=ENSG00000251953.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000251953.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516144.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP522;alternative_source_transcripts=ENST00000516203.1;transcript_id=HG002_chrY_T0001342;gene_id=HG002_chrY_G0000449;Parent=HG002_chrY_G0000449;transcript_name=HG002_chrY_T0001342;gene_name=RNA5SP522;ID=HG002_chrY_T0001342;Name=RNA5SP522
HG002_chrY	CAT	exon	18466096	18466211	.	+	.	source_transcript=ENST00000516144.1;source_transcript_name=RNA5SP522-201;source_gene=ENSG00000251953.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000251953.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516144.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP522;alternative_source_transcripts=ENST00000516203.1;transcript_id=HG002_chrY_T0001342;gene_id=HG002_chrY_G0000449;Parent=HG002_chrY_T0001342;transcript_name=HG002_chrY_T0001342;gene_name=RNA5SP522;ID=exon:HG002_chrY_T0001342:0;Name=RNA5SP522;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18475285	18475374	.	-	.	source_gene_common_name=ENSG00000273966;source_gene=ENSG00000273966.1;alternative_source_transcripts=ENST00000615048.1;gene_id=HG002_chrY_G0000450;gene_biotype=misc_RNA;gene_name=ENSG00000273966;gene_sources=liftoff;ID=HG002_chrY_G0000450;Name=ENSG00000273966
HG002_chrY	CAT	transcript	18475285	18475374	1000	-	.	source_transcript=ENST00000615048.1;source_transcript_name=ENST00000615048;source_gene=ENSG00000273966.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000273966.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000615048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615048.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273966;alternative_source_transcripts=ENST00000615048.1;transcript_id=HG002_chrY_T0001343;gene_id=HG002_chrY_G0000450;Parent=HG002_chrY_G0000450;transcript_name=HG002_chrY_T0001343;gene_name=ENSG00000273966;ID=HG002_chrY_T0001343;Name=ENSG00000273966
HG002_chrY	CAT	exon	18475285	18475374	.	-	.	source_transcript=ENST00000615048.1;source_transcript_name=ENST00000615048;source_gene=ENSG00000273966.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000273966.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000615048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615048.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273966;alternative_source_transcripts=ENST00000615048.1;transcript_id=HG002_chrY_T0001343;gene_id=HG002_chrY_G0000450;Parent=HG002_chrY_T0001343;transcript_name=HG002_chrY_T0001343;gene_name=ENSG00000273966;ID=exon:HG002_chrY_T0001343:0;Name=ENSG00000273966;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18527579	18532162	.	-	.	source_gene_common_name=CLUHP2;source_gene=ENSG00000228945.3;gene_id=HG002_chrY_G0000451;gene_biotype=unprocessed_pseudogene;gene_name=CLUHP2;gene_sources=liftoff;ID=HG002_chrY_G0000451;Name=CLUHP2
HG002_chrY	CAT	transcript	18527579	18532162	1000	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG002_chrY_T0001362;gene_id=HG002_chrY_G0000451;Parent=HG002_chrY_G0000451;transcript_name=HG002_chrY_T0001362;gene_name=CLUHP2;ID=HG002_chrY_T0001362;Name=CLUHP2
HG002_chrY	CAT	exon	18527579	18527706	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG002_chrY_T0001362;gene_id=HG002_chrY_G0000451;Parent=HG002_chrY_T0001362;transcript_name=HG002_chrY_T0001362;gene_name=CLUHP2;ID=exon:HG002_chrY_T0001362:0;Name=CLUHP2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18527707	18527785	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG002_chrY_T0001362;gene_id=HG002_chrY_G0000451;Parent=HG002_chrY_T0001362;transcript_name=HG002_chrY_T0001362;gene_name=CLUHP2;ID=intron:HG002_chrY_T0001362:0;Name=CLUHP2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18527786	18527869	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG002_chrY_T0001362;gene_id=HG002_chrY_G0000451;Parent=HG002_chrY_T0001362;transcript_name=HG002_chrY_T0001362;gene_name=CLUHP2;ID=exon:HG002_chrY_T0001362:1;Name=CLUHP2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18527870	18528349	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG002_chrY_T0001362;gene_id=HG002_chrY_G0000451;Parent=HG002_chrY_T0001362;transcript_name=HG002_chrY_T0001362;gene_name=CLUHP2;ID=intron:HG002_chrY_T0001362:1;Name=CLUHP2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18528350	18528448	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG002_chrY_T0001362;gene_id=HG002_chrY_G0000451;Parent=HG002_chrY_T0001362;transcript_name=HG002_chrY_T0001362;gene_name=CLUHP2;ID=exon:HG002_chrY_T0001362:2;Name=CLUHP2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18528449	18529174	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG002_chrY_T0001362;gene_id=HG002_chrY_G0000451;Parent=HG002_chrY_T0001362;transcript_name=HG002_chrY_T0001362;gene_name=CLUHP2;ID=intron:HG002_chrY_T0001362:2;Name=CLUHP2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18529175	18529228	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG002_chrY_T0001362;gene_id=HG002_chrY_G0000451;Parent=HG002_chrY_T0001362;transcript_name=HG002_chrY_T0001362;gene_name=CLUHP2;ID=exon:HG002_chrY_T0001362:3;Name=CLUHP2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18529229	18529478	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG002_chrY_T0001362;gene_id=HG002_chrY_G0000451;Parent=HG002_chrY_T0001362;transcript_name=HG002_chrY_T0001362;gene_name=CLUHP2;ID=intron:HG002_chrY_T0001362:3;Name=CLUHP2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18529479	18529550	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG002_chrY_T0001362;gene_id=HG002_chrY_G0000451;Parent=HG002_chrY_T0001362;transcript_name=HG002_chrY_T0001362;gene_name=CLUHP2;ID=exon:HG002_chrY_T0001362:4;Name=CLUHP2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18529551	18530194	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG002_chrY_T0001362;gene_id=HG002_chrY_G0000451;Parent=HG002_chrY_T0001362;transcript_name=HG002_chrY_T0001362;gene_name=CLUHP2;ID=intron:HG002_chrY_T0001362:4;Name=CLUHP2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18530195	18530302	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG002_chrY_T0001362;gene_id=HG002_chrY_G0000451;Parent=HG002_chrY_T0001362;transcript_name=HG002_chrY_T0001362;gene_name=CLUHP2;ID=exon:HG002_chrY_T0001362:5;Name=CLUHP2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18530303	18530431	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG002_chrY_T0001362;gene_id=HG002_chrY_G0000451;Parent=HG002_chrY_T0001362;transcript_name=HG002_chrY_T0001362;gene_name=CLUHP2;ID=intron:HG002_chrY_T0001362:5;Name=CLUHP2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18530432	18530577	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG002_chrY_T0001362;gene_id=HG002_chrY_G0000451;Parent=HG002_chrY_T0001362;transcript_name=HG002_chrY_T0001362;gene_name=CLUHP2;ID=exon:HG002_chrY_T0001362:6;Name=CLUHP2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18530578	18530654	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG002_chrY_T0001362;gene_id=HG002_chrY_G0000451;Parent=HG002_chrY_T0001362;transcript_name=HG002_chrY_T0001362;gene_name=CLUHP2;ID=intron:HG002_chrY_T0001362:6;Name=CLUHP2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18530655	18531094	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG002_chrY_T0001362;gene_id=HG002_chrY_G0000451;Parent=HG002_chrY_T0001362;transcript_name=HG002_chrY_T0001362;gene_name=CLUHP2;ID=exon:HG002_chrY_T0001362:7;Name=CLUHP2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18531095	18531990	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG002_chrY_T0001362;gene_id=HG002_chrY_G0000451;Parent=HG002_chrY_T0001362;transcript_name=HG002_chrY_T0001362;gene_name=CLUHP2;ID=intron:HG002_chrY_T0001362:7;Name=CLUHP2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18531991	18532162	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG002_chrY_T0001362;gene_id=HG002_chrY_G0000451;Parent=HG002_chrY_T0001362;transcript_name=HG002_chrY_T0001362;gene_name=CLUHP2;ID=exon:HG002_chrY_T0001362:8;Name=CLUHP2;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18534845	18535734	.	+	.	source_gene_common_name=TAF9P1;source_gene=ENSG00000226353.1;alternative_source_transcripts=ENST00000445421.1;gene_id=HG002_chrY_G0000452;gene_biotype=processed_pseudogene;gene_name=TAF9P1;gene_sources=liftoff;ID=HG002_chrY_G0000452;Name=TAF9P1
HG002_chrY	CAT	transcript	18534845	18535734	1000	+	.	source_transcript=ENST00000445421.1;source_transcript_name=TAF9P1-201;source_gene=ENSG00000226353.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226353.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445421.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445421.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P1;alternative_source_transcripts=ENST00000445421.1;transcript_id=HG002_chrY_T0001363;gene_id=HG002_chrY_G0000452;Parent=HG002_chrY_G0000452;transcript_name=HG002_chrY_T0001363;gene_name=TAF9P1;ID=HG002_chrY_T0001363;Name=TAF9P1
HG002_chrY	CAT	exon	18534845	18535317	.	+	.	source_transcript=ENST00000445421.1;source_transcript_name=TAF9P1-201;source_gene=ENSG00000226353.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226353.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445421.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445421.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P1;alternative_source_transcripts=ENST00000445421.1;transcript_id=HG002_chrY_T0001363;gene_id=HG002_chrY_G0000452;Parent=HG002_chrY_T0001363;transcript_name=HG002_chrY_T0001363;gene_name=TAF9P1;ID=exon:HG002_chrY_T0001363:0;Name=TAF9P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18535318	18535692	.	+	.	source_transcript=ENST00000445421.1;source_transcript_name=TAF9P1-201;source_gene=ENSG00000226353.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226353.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445421.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445421.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P1;alternative_source_transcripts=ENST00000445421.1;transcript_id=HG002_chrY_T0001363;gene_id=HG002_chrY_G0000452;Parent=HG002_chrY_T0001363;transcript_name=HG002_chrY_T0001363;gene_name=TAF9P1;ID=intron:HG002_chrY_T0001363:0;Name=TAF9P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18535693	18535734	.	+	.	source_transcript=ENST00000445421.1;source_transcript_name=TAF9P1-201;source_gene=ENSG00000226353.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226353.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445421.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445421.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P1;alternative_source_transcripts=ENST00000445421.1;transcript_id=HG002_chrY_T0001363;gene_id=HG002_chrY_G0000452;Parent=HG002_chrY_T0001363;transcript_name=HG002_chrY_T0001363;gene_name=TAF9P1;ID=exon:HG002_chrY_T0001363:1;Name=TAF9P1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18609386	18635998	.	-	.	source_gene_common_name=ENSG00000310304;source_gene=ENSG00000310304.1;gene_id=HG002_chrY_G0000453;gene_biotype=lncRNA;gene_name=ENSG00000310304;gene_sources=liftoff;ID=HG002_chrY_G0000453;Name=ENSG00000310304
HG002_chrY	CAT	transcript	18609386	18635956	1000	-	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001364;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_G0000453;transcript_name=HG002_chrY_T0001364;gene_name=ENSG00000310304;ID=HG002_chrY_T0001364;Name=ENSG00000310304
HG002_chrY	CAT	exon	18609386	18609676	.	-	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001364;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001364;transcript_name=HG002_chrY_T0001364;gene_name=ENSG00000310304;ID=exon:HG002_chrY_T0001364:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18609677	18611269	.	-	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001364;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001364;transcript_name=HG002_chrY_T0001364;gene_name=ENSG00000310304;ID=intron:HG002_chrY_T0001364:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18611270	18611394	.	-	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001364;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001364;transcript_name=HG002_chrY_T0001364;gene_name=ENSG00000310304;ID=exon:HG002_chrY_T0001364:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18611395	18612285	.	-	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001364;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001364;transcript_name=HG002_chrY_T0001364;gene_name=ENSG00000310304;ID=intron:HG002_chrY_T0001364:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18612286	18612504	.	-	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001364;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001364;transcript_name=HG002_chrY_T0001364;gene_name=ENSG00000310304;ID=exon:HG002_chrY_T0001364:2;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18612505	18635639	.	-	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001364;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001364;transcript_name=HG002_chrY_T0001364;gene_name=ENSG00000310304;ID=intron:HG002_chrY_T0001364:2;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18635640	18635956	.	-	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001364;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001364;transcript_name=HG002_chrY_T0001364;gene_name=ENSG00000310304;ID=exon:HG002_chrY_T0001364:3;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18620341	18636023	1000	-	.	source_transcript=ENST00000848895.1;source_transcript_name=ENST00000848895;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848895.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001365;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_G0000453;transcript_name=HG002_chrY_T0001365;gene_name=ENSG00000310304;ID=HG002_chrY_T0001365;Name=ENSG00000310304
HG002_chrY	CAT	exon	18620341	18621384	.	-	.	source_transcript=ENST00000848895.1;source_transcript_name=ENST00000848895;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848895.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001365;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001365;transcript_name=HG002_chrY_T0001365;gene_name=ENSG00000310304;ID=exon:HG002_chrY_T0001365:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18621385	18625071	.	-	.	source_transcript=ENST00000848895.1;source_transcript_name=ENST00000848895;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848895.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001365;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001365;transcript_name=HG002_chrY_T0001365;gene_name=ENSG00000310304;ID=intron:HG002_chrY_T0001365:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18625072	18625196	.	-	.	source_transcript=ENST00000848895.1;source_transcript_name=ENST00000848895;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848895.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001365;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001365;transcript_name=HG002_chrY_T0001365;gene_name=ENSG00000310304;ID=exon:HG002_chrY_T0001365:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18625197	18635639	.	-	.	source_transcript=ENST00000848895.1;source_transcript_name=ENST00000848895;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848895.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001365;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001365;transcript_name=HG002_chrY_T0001365;gene_name=ENSG00000310304;ID=intron:HG002_chrY_T0001365:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18635640	18636023	.	-	.	source_transcript=ENST00000848895.1;source_transcript_name=ENST00000848895;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848895.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001365;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001365;transcript_name=HG002_chrY_T0001365;gene_name=ENSG00000310304;ID=exon:HG002_chrY_T0001365:2;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18620344	18635996	1000	-	.	source_transcript=ENST00000848896.1;source_transcript_name=ENST00000848896;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848896.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848896.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001366;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_G0000453;transcript_name=HG002_chrY_T0001366;gene_name=ENSG00000310304;ID=HG002_chrY_T0001366;Name=ENSG00000310304
HG002_chrY	CAT	exon	18620344	18621384	.	-	.	source_transcript=ENST00000848896.1;source_transcript_name=ENST00000848896;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848896.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848896.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001366;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001366;transcript_name=HG002_chrY_T0001366;gene_name=ENSG00000310304;ID=exon:HG002_chrY_T0001366:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18621385	18635639	.	-	.	source_transcript=ENST00000848896.1;source_transcript_name=ENST00000848896;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848896.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848896.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001366;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001366;transcript_name=HG002_chrY_T0001366;gene_name=ENSG00000310304;ID=intron:HG002_chrY_T0001366:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18635640	18635996	.	-	.	source_transcript=ENST00000848896.1;source_transcript_name=ENST00000848896;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848896.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848896.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001366;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001366;transcript_name=HG002_chrY_T0001366;gene_name=ENSG00000310304;ID=exon:HG002_chrY_T0001366:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18620349	18635998	1000	-	.	source_transcript=ENST00000848897.1;source_transcript_name=ENST00000848897;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848897.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001367;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_G0000453;transcript_name=HG002_chrY_T0001367;gene_name=ENSG00000310304;ID=HG002_chrY_T0001367;Name=ENSG00000310304
HG002_chrY	CAT	exon	18620349	18621384	.	-	.	source_transcript=ENST00000848897.1;source_transcript_name=ENST00000848897;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848897.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001367;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001367;transcript_name=HG002_chrY_T0001367;gene_name=ENSG00000310304;ID=exon:HG002_chrY_T0001367:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18621385	18625071	.	-	.	source_transcript=ENST00000848897.1;source_transcript_name=ENST00000848897;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848897.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001367;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001367;transcript_name=HG002_chrY_T0001367;gene_name=ENSG00000310304;ID=intron:HG002_chrY_T0001367:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18625072	18625196	.	-	.	source_transcript=ENST00000848897.1;source_transcript_name=ENST00000848897;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848897.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001367;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001367;transcript_name=HG002_chrY_T0001367;gene_name=ENSG00000310304;ID=exon:HG002_chrY_T0001367:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18625197	18635708	.	-	.	source_transcript=ENST00000848897.1;source_transcript_name=ENST00000848897;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848897.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001367;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001367;transcript_name=HG002_chrY_T0001367;gene_name=ENSG00000310304;ID=intron:HG002_chrY_T0001367:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18635709	18635998	.	-	.	source_transcript=ENST00000848897.1;source_transcript_name=ENST00000848897;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848897.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001367;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001367;transcript_name=HG002_chrY_T0001367;gene_name=ENSG00000310304;ID=exon:HG002_chrY_T0001367:2;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18620349	18635998	1000	-	.	source_transcript=ENST00000848898.1;source_transcript_name=ENST00000848898;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848898.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848898.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001368;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_G0000453;transcript_name=HG002_chrY_T0001368;gene_name=ENSG00000310304;ID=HG002_chrY_T0001368;Name=ENSG00000310304
HG002_chrY	CAT	exon	18620349	18621384	.	-	.	source_transcript=ENST00000848898.1;source_transcript_name=ENST00000848898;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848898.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848898.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001368;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001368;transcript_name=HG002_chrY_T0001368;gene_name=ENSG00000310304;ID=exon:HG002_chrY_T0001368:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18621385	18625071	.	-	.	source_transcript=ENST00000848898.1;source_transcript_name=ENST00000848898;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848898.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848898.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001368;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001368;transcript_name=HG002_chrY_T0001368;gene_name=ENSG00000310304;ID=intron:HG002_chrY_T0001368:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18625072	18625192	.	-	.	source_transcript=ENST00000848898.1;source_transcript_name=ENST00000848898;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848898.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848898.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001368;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001368;transcript_name=HG002_chrY_T0001368;gene_name=ENSG00000310304;ID=exon:HG002_chrY_T0001368:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18625193	18635639	.	-	.	source_transcript=ENST00000848898.1;source_transcript_name=ENST00000848898;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848898.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848898.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001368;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001368;transcript_name=HG002_chrY_T0001368;gene_name=ENSG00000310304;ID=intron:HG002_chrY_T0001368:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18635640	18635998	.	-	.	source_transcript=ENST00000848898.1;source_transcript_name=ENST00000848898;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848898.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848898.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001368;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001368;transcript_name=HG002_chrY_T0001368;gene_name=ENSG00000310304;ID=exon:HG002_chrY_T0001368:2;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18620875	18635956	1000	-	.	source_transcript=ENST00000848899.1;source_transcript_name=ENST00000848899;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848899.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848899.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001369;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_G0000453;transcript_name=HG002_chrY_T0001369;gene_name=ENSG00000310304;ID=HG002_chrY_T0001369;Name=ENSG00000310304
HG002_chrY	CAT	exon	18620875	18621384	.	-	.	source_transcript=ENST00000848899.1;source_transcript_name=ENST00000848899;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848899.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848899.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001369;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001369;transcript_name=HG002_chrY_T0001369;gene_name=ENSG00000310304;ID=exon:HG002_chrY_T0001369:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18621385	18635708	.	-	.	source_transcript=ENST00000848899.1;source_transcript_name=ENST00000848899;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848899.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848899.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001369;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001369;transcript_name=HG002_chrY_T0001369;gene_name=ENSG00000310304;ID=intron:HG002_chrY_T0001369:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18635709	18635956	.	-	.	source_transcript=ENST00000848899.1;source_transcript_name=ENST00000848899;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848899.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848899.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001369;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001369;transcript_name=HG002_chrY_T0001369;gene_name=ENSG00000310304;ID=exon:HG002_chrY_T0001369:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18623900	18636081	1000	-	.	source_transcript=ENST00000848900.1;source_transcript_name=ENST00000848900;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848900.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848900.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001370;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_G0000453;transcript_name=HG002_chrY_T0001370;gene_name=ENSG00000310304;ID=HG002_chrY_T0001370;Name=ENSG00000310304
HG002_chrY	CAT	exon	18623900	18625196	.	-	.	source_transcript=ENST00000848900.1;source_transcript_name=ENST00000848900;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848900.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848900.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001370;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001370;transcript_name=HG002_chrY_T0001370;gene_name=ENSG00000310304;ID=exon:HG002_chrY_T0001370:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18625197	18635639	.	-	.	source_transcript=ENST00000848900.1;source_transcript_name=ENST00000848900;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848900.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848900.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001370;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001370;transcript_name=HG002_chrY_T0001370;gene_name=ENSG00000310304;ID=intron:HG002_chrY_T0001370:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18635640	18636081	.	-	.	source_transcript=ENST00000848900.1;source_transcript_name=ENST00000848900;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848900.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848900.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001370;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001370;transcript_name=HG002_chrY_T0001370;gene_name=ENSG00000310304;ID=exon:HG002_chrY_T0001370:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18623900	18635992	1000	-	.	source_transcript=ENST00000848901.1;source_transcript_name=ENST00000848901;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848901.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001371;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_G0000453;transcript_name=HG002_chrY_T0001371;gene_name=ENSG00000310304;ID=HG002_chrY_T0001371;Name=ENSG00000310304
HG002_chrY	CAT	exon	18623900	18625196	.	-	.	source_transcript=ENST00000848901.1;source_transcript_name=ENST00000848901;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848901.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001371;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001371;transcript_name=HG002_chrY_T0001371;gene_name=ENSG00000310304;ID=exon:HG002_chrY_T0001371:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18625197	18635708	.	-	.	source_transcript=ENST00000848901.1;source_transcript_name=ENST00000848901;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848901.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001371;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001371;transcript_name=HG002_chrY_T0001371;gene_name=ENSG00000310304;ID=intron:HG002_chrY_T0001371:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18635709	18635992	.	-	.	source_transcript=ENST00000848901.1;source_transcript_name=ENST00000848901;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848901.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001371;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001371;transcript_name=HG002_chrY_T0001371;gene_name=ENSG00000310304;ID=exon:HG002_chrY_T0001371:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18625036	18635987	1000	-	.	source_transcript=ENST00000848902.1;source_transcript_name=ENST00000848902;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848902.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001372;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_G0000453;transcript_name=HG002_chrY_T0001372;gene_name=ENSG00000310304;ID=HG002_chrY_T0001372;Name=ENSG00000310304
HG002_chrY	CAT	exon	18625036	18625192	.	-	.	source_transcript=ENST00000848902.1;source_transcript_name=ENST00000848902;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001372;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001372;transcript_name=HG002_chrY_T0001372;gene_name=ENSG00000310304;ID=exon:HG002_chrY_T0001372:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18625193	18635639	.	-	.	source_transcript=ENST00000848902.1;source_transcript_name=ENST00000848902;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001372;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001372;transcript_name=HG002_chrY_T0001372;gene_name=ENSG00000310304;ID=intron:HG002_chrY_T0001372:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18635640	18635987	.	-	.	source_transcript=ENST00000848902.1;source_transcript_name=ENST00000848902;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001372;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001372;transcript_name=HG002_chrY_T0001372;gene_name=ENSG00000310304;ID=exon:HG002_chrY_T0001372:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18630058	18635946	1000	-	.	source_transcript=ENST00000848903.1;source_transcript_name=ENST00000848903;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848903.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848903.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001374;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_G0000453;transcript_name=HG002_chrY_T0001374;gene_name=ENSG00000310304;ID=HG002_chrY_T0001374;Name=ENSG00000310304
HG002_chrY	CAT	exon	18630058	18630691	.	-	.	source_transcript=ENST00000848903.1;source_transcript_name=ENST00000848903;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848903.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848903.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001374;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001374;transcript_name=HG002_chrY_T0001374;gene_name=ENSG00000310304;ID=exon:HG002_chrY_T0001374:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18630692	18635639	.	-	.	source_transcript=ENST00000848903.1;source_transcript_name=ENST00000848903;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848903.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848903.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001374;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001374;transcript_name=HG002_chrY_T0001374;gene_name=ENSG00000310304;ID=intron:HG002_chrY_T0001374:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18635640	18635946	.	-	.	source_transcript=ENST00000848903.1;source_transcript_name=ENST00000848903;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848903.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848903.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001374;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001374;transcript_name=HG002_chrY_T0001374;gene_name=ENSG00000310304;ID=exon:HG002_chrY_T0001374:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18633489	18635995	1000	-	.	source_transcript=ENST00000848904.1;source_transcript_name=ENST00000848904;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848904.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848904.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001376;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_G0000453;transcript_name=HG002_chrY_T0001376;gene_name=ENSG00000310304;ID=HG002_chrY_T0001376;Name=ENSG00000310304
HG002_chrY	CAT	exon	18633489	18634051	.	-	.	source_transcript=ENST00000848904.1;source_transcript_name=ENST00000848904;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848904.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848904.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001376;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001376;transcript_name=HG002_chrY_T0001376;gene_name=ENSG00000310304;ID=exon:HG002_chrY_T0001376:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18634052	18635639	.	-	.	source_transcript=ENST00000848904.1;source_transcript_name=ENST00000848904;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848904.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848904.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001376;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001376;transcript_name=HG002_chrY_T0001376;gene_name=ENSG00000310304;ID=intron:HG002_chrY_T0001376:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18635640	18635995	.	-	.	source_transcript=ENST00000848904.1;source_transcript_name=ENST00000848904;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848904.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848904.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;transcript_id=HG002_chrY_T0001376;gene_id=HG002_chrY_G0000453;Parent=HG002_chrY_T0001376;transcript_name=HG002_chrY_T0001376;gene_name=ENSG00000310304;ID=exon:HG002_chrY_T0001376:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18627923	18629502	.	+	.	source_gene_common_name=CDY5P;source_gene=ENSG00000226449.1;alternative_source_transcripts=ENST00000411487.1;gene_id=HG002_chrY_G0000454;gene_biotype=unprocessed_pseudogene;gene_name=CDY5P;gene_sources=liftoff;ID=HG002_chrY_G0000454;Name=CDY5P
HG002_chrY	CAT	transcript	18627923	18629502	1000	+	.	source_transcript=ENST00000411487.1;source_transcript_name=CDY5P-201;source_gene=ENSG00000226449.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226449.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000411487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411487.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY5P;alternative_source_transcripts=ENST00000411487.1;transcript_id=HG002_chrY_T0001373;gene_id=HG002_chrY_G0000454;Parent=HG002_chrY_G0000454;transcript_name=HG002_chrY_T0001373;gene_name=CDY5P;ID=HG002_chrY_T0001373;Name=CDY5P
HG002_chrY	CAT	exon	18627923	18629502	.	+	.	source_transcript=ENST00000411487.1;source_transcript_name=CDY5P-201;source_gene=ENSG00000226449.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226449.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000411487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411487.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY5P;alternative_source_transcripts=ENST00000411487.1;transcript_id=HG002_chrY_T0001373;gene_id=HG002_chrY_G0000454;Parent=HG002_chrY_T0001373;transcript_name=HG002_chrY_T0001373;gene_name=CDY5P;ID=exon:HG002_chrY_T0001373:0;Name=CDY5P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18633077	18633405	.	+	.	source_gene_common_name=ELOCP36;source_gene=ENSG00000225896.1;alternative_source_transcripts=ENST00000425789.1;gene_id=HG002_chrY_G0000455;gene_biotype=processed_pseudogene;gene_name=ELOCP36;gene_sources=liftoff;ID=HG002_chrY_G0000455;Name=ELOCP36
HG002_chrY	CAT	transcript	18633077	18633405	1000	+	.	source_transcript=ENST00000425789.1;source_transcript_name=ELOCP36-201;source_gene=ENSG00000225896.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225896.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425789.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP36;alternative_source_transcripts=ENST00000425789.1;transcript_id=HG002_chrY_T0001375;gene_id=HG002_chrY_G0000455;Parent=HG002_chrY_G0000455;transcript_name=HG002_chrY_T0001375;gene_name=ELOCP36;ID=HG002_chrY_T0001375;Name=ELOCP36
HG002_chrY	CAT	exon	18633077	18633405	.	+	.	source_transcript=ENST00000425789.1;source_transcript_name=ELOCP36-201;source_gene=ENSG00000225896.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225896.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425789.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP36;alternative_source_transcripts=ENST00000425789.1;transcript_id=HG002_chrY_T0001375;gene_id=HG002_chrY_G0000455;Parent=HG002_chrY_T0001375;transcript_name=HG002_chrY_T0001375;gene_name=ELOCP36;ID=exon:HG002_chrY_T0001375:0;Name=ELOCP36;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18663328	18664452	.	-	.	source_gene_common_name=ACTG1P11;source_gene=ENSG00000229465.1;alternative_source_transcripts=ENST00000415776.1;gene_id=HG002_chrY_G0000456;gene_biotype=processed_pseudogene;gene_name=ACTG1P11;gene_sources=liftoff;ID=HG002_chrY_G0000456;Name=ACTG1P11
HG002_chrY	CAT	transcript	18663328	18664452	1000	-	.	source_transcript=ENST00000425411.1;source_transcript_name=ACTG1P11-201;source_gene=ENSG00000229465.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229465.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425411.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425411.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTG1P11;alternative_source_transcripts=ENST00000415776.1;transcript_id=HG002_chrY_T0001377;gene_id=HG002_chrY_G0000456;Parent=HG002_chrY_G0000456;transcript_name=HG002_chrY_T0001377;gene_name=ACTG1P11;ID=HG002_chrY_T0001377;Name=ACTG1P11
HG002_chrY	CAT	exon	18663328	18664452	.	-	.	source_transcript=ENST00000425411.1;source_transcript_name=ACTG1P11-201;source_gene=ENSG00000229465.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229465.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425411.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425411.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTG1P11;alternative_source_transcripts=ENST00000415776.1;transcript_id=HG002_chrY_T0001377;gene_id=HG002_chrY_G0000456;Parent=HG002_chrY_T0001377;transcript_name=HG002_chrY_T0001377;gene_name=ACTG1P11;ID=exon:HG002_chrY_T0001377:0;Name=ACTG1P11;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18675307	18676887	.	-	.	source_gene_common_name=XKRYP7;source_gene=ENSG00000290725.1;gene_id=HG002_chrY_G0000457;gene_biotype=lncRNA;gene_name=XKRYP7;gene_sources=liftoff;ID=HG002_chrY_G0000457;Name=XKRYP7
HG002_chrY	CAT	transcript	18675307	18676887	1000	-	.	source_transcript=ENST00000623874.1;source_transcript_name=XKRYP7-202;source_gene=ENSG00000290725.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290725.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000623874.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000623874.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP7;transcript_id=HG002_chrY_T0001378;gene_id=HG002_chrY_G0000457;Parent=HG002_chrY_G0000457;transcript_name=HG002_chrY_T0001378;gene_name=XKRYP7;ID=HG002_chrY_T0001378;Name=XKRYP7
HG002_chrY	CAT	exon	18675307	18676887	.	-	.	source_transcript=ENST00000623874.1;source_transcript_name=XKRYP7-202;source_gene=ENSG00000290725.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290725.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000623874.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000623874.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP7;transcript_id=HG002_chrY_T0001378;gene_id=HG002_chrY_G0000457;Parent=HG002_chrY_T0001378;transcript_name=HG002_chrY_T0001378;gene_name=XKRYP7;ID=exon:HG002_chrY_T0001378:0;Name=XKRYP7;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18675450	18683727	.	-	.	source_gene_common_name=XKRYP7;source_gene=ENSG00000244646.5;gene_id=HG002_chrY_G0000458;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=XKRYP7;gene_sources=liftoff;ID=HG002_chrY_G0000458;Name=XKRYP7
HG002_chrY	CAT	transcript	18675450	18683727	1000	-	.	source_transcript=ENST00000442362.2;source_transcript_name=XKRYP7-201;source_gene=ENSG00000244646.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000244646.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442362.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442362.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP7;transcript_id=HG002_chrY_T0001379;gene_id=HG002_chrY_G0000458;Parent=HG002_chrY_G0000458;transcript_name=HG002_chrY_T0001379;gene_name=XKRYP7;ID=HG002_chrY_T0001379;Name=XKRYP7
HG002_chrY	CAT	exon	18675450	18676207	.	-	.	source_transcript=ENST00000442362.2;source_transcript_name=XKRYP7-201;source_gene=ENSG00000244646.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000244646.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442362.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442362.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP7;transcript_id=HG002_chrY_T0001379;gene_id=HG002_chrY_G0000458;Parent=HG002_chrY_T0001379;transcript_name=HG002_chrY_T0001379;gene_name=XKRYP7;ID=exon:HG002_chrY_T0001379:0;Name=XKRYP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18676208	18683392	.	-	.	source_transcript=ENST00000442362.2;source_transcript_name=XKRYP7-201;source_gene=ENSG00000244646.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000244646.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442362.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442362.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP7;transcript_id=HG002_chrY_T0001379;gene_id=HG002_chrY_G0000458;Parent=HG002_chrY_T0001379;transcript_name=HG002_chrY_T0001379;gene_name=XKRYP7;ID=intron:HG002_chrY_T0001379:0;Name=XKRYP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18683393	18683727	.	-	.	source_transcript=ENST00000442362.2;source_transcript_name=XKRYP7-201;source_gene=ENSG00000244646.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000244646.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442362.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442362.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP7;transcript_id=HG002_chrY_T0001379;gene_id=HG002_chrY_G0000458;Parent=HG002_chrY_T0001379;transcript_name=HG002_chrY_T0001379;gene_name=XKRYP7;ID=exon:HG002_chrY_T0001379:1;Name=XKRYP7;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18688538	18691143	.	+	.	source_gene_common_name=USP9YP23;source_gene=ENSG00000223555.1;alternative_source_transcripts=ENST00000455085.1;gene_id=HG002_chrY_G0000459;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP23;gene_sources=liftoff;ID=HG002_chrY_G0000459;Name=USP9YP23
HG002_chrY	CAT	transcript	18688538	18691143	1000	+	.	source_transcript=ENST00000455085.1;source_transcript_name=USP9YP23-201;source_gene=ENSG00000223555.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223555.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455085.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455085.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP23;alternative_source_transcripts=ENST00000455085.1;transcript_id=HG002_chrY_T0001380;gene_id=HG002_chrY_G0000459;Parent=HG002_chrY_G0000459;transcript_name=HG002_chrY_T0001380;gene_name=USP9YP23;ID=HG002_chrY_T0001380;Name=USP9YP23
HG002_chrY	CAT	exon	18688538	18688663	.	+	.	source_transcript=ENST00000455085.1;source_transcript_name=USP9YP23-201;source_gene=ENSG00000223555.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223555.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455085.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455085.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP23;alternative_source_transcripts=ENST00000455085.1;transcript_id=HG002_chrY_T0001380;gene_id=HG002_chrY_G0000459;Parent=HG002_chrY_T0001380;transcript_name=HG002_chrY_T0001380;gene_name=USP9YP23;ID=exon:HG002_chrY_T0001380:0;Name=USP9YP23;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18688664	18689237	.	+	.	source_transcript=ENST00000455085.1;source_transcript_name=USP9YP23-201;source_gene=ENSG00000223555.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223555.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455085.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455085.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP23;alternative_source_transcripts=ENST00000455085.1;transcript_id=HG002_chrY_T0001380;gene_id=HG002_chrY_G0000459;Parent=HG002_chrY_T0001380;transcript_name=HG002_chrY_T0001380;gene_name=USP9YP23;ID=intron:HG002_chrY_T0001380:0;Name=USP9YP23;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18689238	18689329	.	+	.	source_transcript=ENST00000455085.1;source_transcript_name=USP9YP23-201;source_gene=ENSG00000223555.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223555.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455085.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455085.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP23;alternative_source_transcripts=ENST00000455085.1;transcript_id=HG002_chrY_T0001380;gene_id=HG002_chrY_G0000459;Parent=HG002_chrY_T0001380;transcript_name=HG002_chrY_T0001380;gene_name=USP9YP23;ID=exon:HG002_chrY_T0001380:1;Name=USP9YP23;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18689330	18690954	.	+	.	source_transcript=ENST00000455085.1;source_transcript_name=USP9YP23-201;source_gene=ENSG00000223555.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223555.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455085.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455085.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP23;alternative_source_transcripts=ENST00000455085.1;transcript_id=HG002_chrY_T0001380;gene_id=HG002_chrY_G0000459;Parent=HG002_chrY_T0001380;transcript_name=HG002_chrY_T0001380;gene_name=USP9YP23;ID=intron:HG002_chrY_T0001380:1;Name=USP9YP23;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18690955	18691143	.	+	.	source_transcript=ENST00000455085.1;source_transcript_name=USP9YP23-201;source_gene=ENSG00000223555.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223555.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455085.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455085.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP23;alternative_source_transcripts=ENST00000455085.1;transcript_id=HG002_chrY_T0001380;gene_id=HG002_chrY_G0000459;Parent=HG002_chrY_T0001380;transcript_name=HG002_chrY_T0001380;gene_name=USP9YP23;ID=exon:HG002_chrY_T0001380:2;Name=USP9YP23;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18694643	18695811	.	-	.	source_gene_common_name=USP9YP15;source_gene=ENSG00000233120.1;gene_id=HG002_chrY_G0000460;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP15;gene_sources=liftoff;ID=HG002_chrY_G0000460;Name=USP9YP15
HG002_chrY	CAT	transcript	18694643	18695811	1000	-	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=HG002_chrY_T0001381;gene_id=HG002_chrY_G0000460;Parent=HG002_chrY_G0000460;transcript_name=HG002_chrY_T0001381;gene_name=USP9YP15;ID=HG002_chrY_T0001381;Name=USP9YP15
HG002_chrY	CAT	exon	18694643	18694738	.	-	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=HG002_chrY_T0001381;gene_id=HG002_chrY_G0000460;Parent=HG002_chrY_T0001381;transcript_name=HG002_chrY_T0001381;gene_name=USP9YP15;ID=exon:HG002_chrY_T0001381:0;Name=USP9YP15;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18694739	18695118	.	-	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=HG002_chrY_T0001381;gene_id=HG002_chrY_G0000460;Parent=HG002_chrY_T0001381;transcript_name=HG002_chrY_T0001381;gene_name=USP9YP15;ID=intron:HG002_chrY_T0001381:0;Name=USP9YP15;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18695119	18695277	.	-	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=HG002_chrY_T0001381;gene_id=HG002_chrY_G0000460;Parent=HG002_chrY_T0001381;transcript_name=HG002_chrY_T0001381;gene_name=USP9YP15;ID=exon:HG002_chrY_T0001381:1;Name=USP9YP15;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18695278	18695489	.	-	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=HG002_chrY_T0001381;gene_id=HG002_chrY_G0000460;Parent=HG002_chrY_T0001381;transcript_name=HG002_chrY_T0001381;gene_name=USP9YP15;ID=intron:HG002_chrY_T0001381:1;Name=USP9YP15;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18695490	18695518	.	-	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=HG002_chrY_T0001381;gene_id=HG002_chrY_G0000460;Parent=HG002_chrY_T0001381;transcript_name=HG002_chrY_T0001381;gene_name=USP9YP15;ID=exon:HG002_chrY_T0001381:2;Name=USP9YP15;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18695519	18695673	.	-	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=HG002_chrY_T0001381;gene_id=HG002_chrY_G0000460;Parent=HG002_chrY_T0001381;transcript_name=HG002_chrY_T0001381;gene_name=USP9YP15;ID=intron:HG002_chrY_T0001381:2;Name=USP9YP15;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18695674	18695811	.	-	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=HG002_chrY_T0001381;gene_id=HG002_chrY_G0000460;Parent=HG002_chrY_T0001381;transcript_name=HG002_chrY_T0001381;gene_name=USP9YP15;ID=exon:HG002_chrY_T0001381:3;Name=USP9YP15;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18695331	18695490	.	-	.	source_gene_common_name=RNU1-95P;source_gene=ENSG00000252166.1;gene_id=HG002_chrY_G0000461;gene_biotype=snRNA;gene_name=RNU1-95P;gene_sources=liftoff;ID=HG002_chrY_G0000461;Name=RNU1-95P
HG002_chrY	CAT	transcript	18695331	18695490	1000	-	.	source_transcript=ENST00000516357.1;source_transcript_name=RNU1-95P-201;source_gene=ENSG00000252166.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252166.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516357.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516357.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-95P;transcript_id=HG002_chrY_T0001382;gene_id=HG002_chrY_G0000461;Parent=HG002_chrY_G0000461;transcript_name=HG002_chrY_T0001382;gene_name=RNU1-95P;ID=HG002_chrY_T0001382;Name=RNU1-95P
HG002_chrY	CAT	exon	18695331	18695490	.	-	.	source_transcript=ENST00000516357.1;source_transcript_name=RNU1-95P-201;source_gene=ENSG00000252166.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252166.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516357.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516357.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-95P;transcript_id=HG002_chrY_T0001382;gene_id=HG002_chrY_G0000461;Parent=HG002_chrY_T0001382;transcript_name=HG002_chrY_T0001382;gene_name=RNU1-95P;ID=exon:HG002_chrY_T0001382:0;Name=RNU1-95P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18704236	18707024	.	-	.	source_gene_common_name=TRAPPC2P8;source_gene=ENSG00000225895.1;gene_id=HG002_chrY_G0000462;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P8;gene_sources=liftoff;ID=HG002_chrY_G0000462;Name=TRAPPC2P8
HG002_chrY	CAT	transcript	18704236	18707024	1000	-	.	source_transcript=ENST00000440676.1;source_transcript_name=TRAPPC2P8-201;source_gene=ENSG00000225895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440676.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P8;transcript_id=HG002_chrY_T0001383;gene_id=HG002_chrY_G0000462;Parent=HG002_chrY_G0000462;transcript_name=HG002_chrY_T0001383;gene_name=TRAPPC2P8;ID=HG002_chrY_T0001383;Name=TRAPPC2P8
HG002_chrY	CAT	exon	18704236	18704391	.	-	.	source_transcript=ENST00000440676.1;source_transcript_name=TRAPPC2P8-201;source_gene=ENSG00000225895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440676.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P8;transcript_id=HG002_chrY_T0001383;gene_id=HG002_chrY_G0000462;Parent=HG002_chrY_T0001383;transcript_name=HG002_chrY_T0001383;gene_name=TRAPPC2P8;ID=exon:HG002_chrY_T0001383:0;Name=TRAPPC2P8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18704392	18704835	.	-	.	source_transcript=ENST00000440676.1;source_transcript_name=TRAPPC2P8-201;source_gene=ENSG00000225895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440676.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P8;transcript_id=HG002_chrY_T0001383;gene_id=HG002_chrY_G0000462;Parent=HG002_chrY_T0001383;transcript_name=HG002_chrY_T0001383;gene_name=TRAPPC2P8;ID=intron:HG002_chrY_T0001383:0;Name=TRAPPC2P8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18704836	18704982	.	-	.	source_transcript=ENST00000440676.1;source_transcript_name=TRAPPC2P8-201;source_gene=ENSG00000225895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440676.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P8;transcript_id=HG002_chrY_T0001383;gene_id=HG002_chrY_G0000462;Parent=HG002_chrY_T0001383;transcript_name=HG002_chrY_T0001383;gene_name=TRAPPC2P8;ID=exon:HG002_chrY_T0001383:1;Name=TRAPPC2P8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18704983	18706931	.	-	.	source_transcript=ENST00000440676.1;source_transcript_name=TRAPPC2P8-201;source_gene=ENSG00000225895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440676.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P8;transcript_id=HG002_chrY_T0001383;gene_id=HG002_chrY_G0000462;Parent=HG002_chrY_T0001383;transcript_name=HG002_chrY_T0001383;gene_name=TRAPPC2P8;ID=intron:HG002_chrY_T0001383:1;Name=TRAPPC2P8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18706932	18707024	.	-	.	source_transcript=ENST00000440676.1;source_transcript_name=TRAPPC2P8-201;source_gene=ENSG00000225895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440676.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P8;transcript_id=HG002_chrY_T0001383;gene_id=HG002_chrY_G0000462;Parent=HG002_chrY_T0001383;transcript_name=HG002_chrY_T0001383;gene_name=TRAPPC2P8;ID=exon:HG002_chrY_T0001383:2;Name=TRAPPC2P8;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18716135	18731658	.	+	.	source_gene_common_name=OFD1P1Y;source_gene=ENSG00000226011.1;gene_id=HG002_chrY_G0000463;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=OFD1P1Y;gene_sources=liftoff;ID=HG002_chrY_G0000463;Name=OFD1P1Y
HG002_chrY	CAT	transcript	18716135	18731658	1000	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG002_chrY_T0001384;gene_id=HG002_chrY_G0000463;Parent=HG002_chrY_G0000463;transcript_name=HG002_chrY_T0001384;gene_name=OFD1P1Y;ID=HG002_chrY_T0001384;Name=OFD1P1Y
HG002_chrY	CAT	exon	18716135	18716234	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG002_chrY_T0001384;gene_id=HG002_chrY_G0000463;Parent=HG002_chrY_T0001384;transcript_name=HG002_chrY_T0001384;gene_name=OFD1P1Y;ID=exon:HG002_chrY_T0001384:0;Name=OFD1P1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18716235	18717454	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG002_chrY_T0001384;gene_id=HG002_chrY_G0000463;Parent=HG002_chrY_T0001384;transcript_name=HG002_chrY_T0001384;gene_name=OFD1P1Y;ID=intron:HG002_chrY_T0001384:0;Name=OFD1P1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18717455	18717655	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG002_chrY_T0001384;gene_id=HG002_chrY_G0000463;Parent=HG002_chrY_T0001384;transcript_name=HG002_chrY_T0001384;gene_name=OFD1P1Y;ID=exon:HG002_chrY_T0001384:1;Name=OFD1P1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18717656	18719849	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG002_chrY_T0001384;gene_id=HG002_chrY_G0000463;Parent=HG002_chrY_T0001384;transcript_name=HG002_chrY_T0001384;gene_name=OFD1P1Y;ID=intron:HG002_chrY_T0001384:1;Name=OFD1P1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18719850	18719917	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG002_chrY_T0001384;gene_id=HG002_chrY_G0000463;Parent=HG002_chrY_T0001384;transcript_name=HG002_chrY_T0001384;gene_name=OFD1P1Y;ID=exon:HG002_chrY_T0001384:2;Name=OFD1P1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18719918	18720002	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG002_chrY_T0001384;gene_id=HG002_chrY_G0000463;Parent=HG002_chrY_T0001384;transcript_name=HG002_chrY_T0001384;gene_name=OFD1P1Y;ID=intron:HG002_chrY_T0001384:2;Name=OFD1P1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18720003	18720033	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG002_chrY_T0001384;gene_id=HG002_chrY_G0000463;Parent=HG002_chrY_T0001384;transcript_name=HG002_chrY_T0001384;gene_name=OFD1P1Y;ID=exon:HG002_chrY_T0001384:3;Name=OFD1P1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18720034	18721556	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG002_chrY_T0001384;gene_id=HG002_chrY_G0000463;Parent=HG002_chrY_T0001384;transcript_name=HG002_chrY_T0001384;gene_name=OFD1P1Y;ID=intron:HG002_chrY_T0001384:3;Name=OFD1P1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18721557	18721693	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG002_chrY_T0001384;gene_id=HG002_chrY_G0000463;Parent=HG002_chrY_T0001384;transcript_name=HG002_chrY_T0001384;gene_name=OFD1P1Y;ID=exon:HG002_chrY_T0001384:4;Name=OFD1P1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18721694	18722017	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG002_chrY_T0001384;gene_id=HG002_chrY_G0000463;Parent=HG002_chrY_T0001384;transcript_name=HG002_chrY_T0001384;gene_name=OFD1P1Y;ID=intron:HG002_chrY_T0001384:4;Name=OFD1P1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18722018	18722164	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG002_chrY_T0001384;gene_id=HG002_chrY_G0000463;Parent=HG002_chrY_T0001384;transcript_name=HG002_chrY_T0001384;gene_name=OFD1P1Y;ID=exon:HG002_chrY_T0001384:5;Name=OFD1P1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18722165	18725253	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG002_chrY_T0001384;gene_id=HG002_chrY_G0000463;Parent=HG002_chrY_T0001384;transcript_name=HG002_chrY_T0001384;gene_name=OFD1P1Y;ID=intron:HG002_chrY_T0001384:5;Name=OFD1P1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18725254	18725359	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG002_chrY_T0001384;gene_id=HG002_chrY_G0000463;Parent=HG002_chrY_T0001384;transcript_name=HG002_chrY_T0001384;gene_name=OFD1P1Y;ID=exon:HG002_chrY_T0001384:6;Name=OFD1P1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18725360	18726662	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG002_chrY_T0001384;gene_id=HG002_chrY_G0000463;Parent=HG002_chrY_T0001384;transcript_name=HG002_chrY_T0001384;gene_name=OFD1P1Y;ID=intron:HG002_chrY_T0001384:6;Name=OFD1P1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18726663	18726782	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG002_chrY_T0001384;gene_id=HG002_chrY_G0000463;Parent=HG002_chrY_T0001384;transcript_name=HG002_chrY_T0001384;gene_name=OFD1P1Y;ID=exon:HG002_chrY_T0001384:7;Name=OFD1P1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18726783	18728619	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG002_chrY_T0001384;gene_id=HG002_chrY_G0000463;Parent=HG002_chrY_T0001384;transcript_name=HG002_chrY_T0001384;gene_name=OFD1P1Y;ID=intron:HG002_chrY_T0001384:7;Name=OFD1P1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18728620	18728693	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG002_chrY_T0001384;gene_id=HG002_chrY_G0000463;Parent=HG002_chrY_T0001384;transcript_name=HG002_chrY_T0001384;gene_name=OFD1P1Y;ID=exon:HG002_chrY_T0001384:8;Name=OFD1P1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18728694	18729797	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG002_chrY_T0001384;gene_id=HG002_chrY_G0000463;Parent=HG002_chrY_T0001384;transcript_name=HG002_chrY_T0001384;gene_name=OFD1P1Y;ID=intron:HG002_chrY_T0001384:8;Name=OFD1P1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18729798	18729889	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG002_chrY_T0001384;gene_id=HG002_chrY_G0000463;Parent=HG002_chrY_T0001384;transcript_name=HG002_chrY_T0001384;gene_name=OFD1P1Y;ID=exon:HG002_chrY_T0001384:9;Name=OFD1P1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18729890	18731509	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG002_chrY_T0001384;gene_id=HG002_chrY_G0000463;Parent=HG002_chrY_T0001384;transcript_name=HG002_chrY_T0001384;gene_name=OFD1P1Y;ID=intron:HG002_chrY_T0001384:9;Name=OFD1P1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18731510	18731658	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG002_chrY_T0001384;gene_id=HG002_chrY_G0000463;Parent=HG002_chrY_T0001384;transcript_name=HG002_chrY_T0001384;gene_name=OFD1P1Y;ID=exon:HG002_chrY_T0001384:10;Name=OFD1P1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18724764	18731656	.	+	.	source_gene_common_name=ENSG00000300757;source_gene=ENSG00000300757.1;gene_id=HG002_chrY_G0000464;gene_biotype=lncRNA;gene_name=ENSG00000300757;gene_sources=liftoff;ID=HG002_chrY_G0000464;Name=ENSG00000300757
HG002_chrY	CAT	transcript	18724764	18726858	1000	+	.	source_transcript=ENST00000773847.1;source_transcript_name=ENST00000773847;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773847.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773847.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG002_chrY_T0001385;gene_id=HG002_chrY_G0000464;Parent=HG002_chrY_G0000464;transcript_name=HG002_chrY_T0001385;gene_name=ENSG00000300757;ID=HG002_chrY_T0001385;Name=ENSG00000300757
HG002_chrY	CAT	exon	18724764	18724847	.	+	.	source_transcript=ENST00000773847.1;source_transcript_name=ENST00000773847;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773847.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773847.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG002_chrY_T0001385;gene_id=HG002_chrY_G0000464;Parent=HG002_chrY_T0001385;transcript_name=HG002_chrY_T0001385;gene_name=ENSG00000300757;ID=exon:HG002_chrY_T0001385:0;Name=ENSG00000300757;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18724848	18724950	.	+	.	source_transcript=ENST00000773847.1;source_transcript_name=ENST00000773847;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773847.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773847.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG002_chrY_T0001385;gene_id=HG002_chrY_G0000464;Parent=HG002_chrY_T0001385;transcript_name=HG002_chrY_T0001385;gene_name=ENSG00000300757;ID=intron:HG002_chrY_T0001385:0;Name=ENSG00000300757;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18724951	18725091	.	+	.	source_transcript=ENST00000773847.1;source_transcript_name=ENST00000773847;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773847.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773847.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG002_chrY_T0001385;gene_id=HG002_chrY_G0000464;Parent=HG002_chrY_T0001385;transcript_name=HG002_chrY_T0001385;gene_name=ENSG00000300757;ID=exon:HG002_chrY_T0001385:1;Name=ENSG00000300757;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18725092	18726663	.	+	.	source_transcript=ENST00000773847.1;source_transcript_name=ENST00000773847;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773847.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773847.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG002_chrY_T0001385;gene_id=HG002_chrY_G0000464;Parent=HG002_chrY_T0001385;transcript_name=HG002_chrY_T0001385;gene_name=ENSG00000300757;ID=intron:HG002_chrY_T0001385:1;Name=ENSG00000300757;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18726664	18726858	.	+	.	source_transcript=ENST00000773847.1;source_transcript_name=ENST00000773847;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773847.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773847.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG002_chrY_T0001385;gene_id=HG002_chrY_G0000464;Parent=HG002_chrY_T0001385;transcript_name=HG002_chrY_T0001385;gene_name=ENSG00000300757;ID=exon:HG002_chrY_T0001385:2;Name=ENSG00000300757;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18724972	18726855	1000	+	.	source_transcript=ENST00000773848.1;source_transcript_name=ENST00000773848;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773848.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG002_chrY_T0001386;gene_id=HG002_chrY_G0000464;Parent=HG002_chrY_G0000464;transcript_name=HG002_chrY_T0001386;gene_name=ENSG00000300757;ID=HG002_chrY_T0001386;Name=ENSG00000300757
HG002_chrY	CAT	exon	18724972	18725091	.	+	.	source_transcript=ENST00000773848.1;source_transcript_name=ENST00000773848;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG002_chrY_T0001386;gene_id=HG002_chrY_G0000464;Parent=HG002_chrY_T0001386;transcript_name=HG002_chrY_T0001386;gene_name=ENSG00000300757;ID=exon:HG002_chrY_T0001386:0;Name=ENSG00000300757;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18725092	18726663	.	+	.	source_transcript=ENST00000773848.1;source_transcript_name=ENST00000773848;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG002_chrY_T0001386;gene_id=HG002_chrY_G0000464;Parent=HG002_chrY_T0001386;transcript_name=HG002_chrY_T0001386;gene_name=ENSG00000300757;ID=intron:HG002_chrY_T0001386:0;Name=ENSG00000300757;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18726664	18726855	.	+	.	source_transcript=ENST00000773848.1;source_transcript_name=ENST00000773848;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG002_chrY_T0001386;gene_id=HG002_chrY_G0000464;Parent=HG002_chrY_T0001386;transcript_name=HG002_chrY_T0001386;gene_name=ENSG00000300757;ID=exon:HG002_chrY_T0001386:1;Name=ENSG00000300757;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18726274	18731656	1000	+	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG002_chrY_T0001387;gene_id=HG002_chrY_G0000464;Parent=HG002_chrY_G0000464;transcript_name=HG002_chrY_T0001387;gene_name=ENSG00000300757;ID=HG002_chrY_T0001387;Name=ENSG00000300757
HG002_chrY	CAT	exon	18726274	18726391	.	+	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG002_chrY_T0001387;gene_id=HG002_chrY_G0000464;Parent=HG002_chrY_T0001387;transcript_name=HG002_chrY_T0001387;gene_name=ENSG00000300757;ID=exon:HG002_chrY_T0001387:0;Name=ENSG00000300757;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18726392	18726663	.	+	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG002_chrY_T0001387;gene_id=HG002_chrY_G0000464;Parent=HG002_chrY_T0001387;transcript_name=HG002_chrY_T0001387;gene_name=ENSG00000300757;ID=intron:HG002_chrY_T0001387:0;Name=ENSG00000300757;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18726664	18726807	.	+	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG002_chrY_T0001387;gene_id=HG002_chrY_G0000464;Parent=HG002_chrY_T0001387;transcript_name=HG002_chrY_T0001387;gene_name=ENSG00000300757;ID=exon:HG002_chrY_T0001387:1;Name=ENSG00000300757;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18726808	18728619	.	+	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG002_chrY_T0001387;gene_id=HG002_chrY_G0000464;Parent=HG002_chrY_T0001387;transcript_name=HG002_chrY_T0001387;gene_name=ENSG00000300757;ID=intron:HG002_chrY_T0001387:1;Name=ENSG00000300757;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18728620	18728693	.	+	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG002_chrY_T0001387;gene_id=HG002_chrY_G0000464;Parent=HG002_chrY_T0001387;transcript_name=HG002_chrY_T0001387;gene_name=ENSG00000300757;ID=exon:HG002_chrY_T0001387:2;Name=ENSG00000300757;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18728694	18731509	.	+	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG002_chrY_T0001387;gene_id=HG002_chrY_G0000464;Parent=HG002_chrY_T0001387;transcript_name=HG002_chrY_T0001387;gene_name=ENSG00000300757;ID=intron:HG002_chrY_T0001387:2;Name=ENSG00000300757;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18731510	18731656	.	+	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG002_chrY_T0001387;gene_id=HG002_chrY_G0000464;Parent=HG002_chrY_T0001387;transcript_name=HG002_chrY_T0001387;gene_name=ENSG00000300757;ID=exon:HG002_chrY_T0001387:3;Name=ENSG00000300757;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18726279	18731549	1000	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG002_chrY_T0001388;gene_id=HG002_chrY_G0000464;Parent=HG002_chrY_G0000464;transcript_name=HG002_chrY_T0001388;gene_name=ENSG00000300757;ID=HG002_chrY_T0001388;Name=ENSG00000300757
HG002_chrY	CAT	exon	18726279	18726391	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG002_chrY_T0001388;gene_id=HG002_chrY_G0000464;Parent=HG002_chrY_T0001388;transcript_name=HG002_chrY_T0001388;gene_name=ENSG00000300757;ID=exon:HG002_chrY_T0001388:0;Name=ENSG00000300757;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18726392	18726663	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG002_chrY_T0001388;gene_id=HG002_chrY_G0000464;Parent=HG002_chrY_T0001388;transcript_name=HG002_chrY_T0001388;gene_name=ENSG00000300757;ID=intron:HG002_chrY_T0001388:0;Name=ENSG00000300757;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18726664	18726782	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG002_chrY_T0001388;gene_id=HG002_chrY_G0000464;Parent=HG002_chrY_T0001388;transcript_name=HG002_chrY_T0001388;gene_name=ENSG00000300757;ID=exon:HG002_chrY_T0001388:1;Name=ENSG00000300757;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18726783	18728176	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG002_chrY_T0001388;gene_id=HG002_chrY_G0000464;Parent=HG002_chrY_T0001388;transcript_name=HG002_chrY_T0001388;gene_name=ENSG00000300757;ID=intron:HG002_chrY_T0001388:1;Name=ENSG00000300757;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18728177	18728252	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG002_chrY_T0001388;gene_id=HG002_chrY_G0000464;Parent=HG002_chrY_T0001388;transcript_name=HG002_chrY_T0001388;gene_name=ENSG00000300757;ID=exon:HG002_chrY_T0001388:2;Name=ENSG00000300757;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18728253	18728619	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG002_chrY_T0001388;gene_id=HG002_chrY_G0000464;Parent=HG002_chrY_T0001388;transcript_name=HG002_chrY_T0001388;gene_name=ENSG00000300757;ID=intron:HG002_chrY_T0001388:2;Name=ENSG00000300757;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18728620	18728693	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG002_chrY_T0001388;gene_id=HG002_chrY_G0000464;Parent=HG002_chrY_T0001388;transcript_name=HG002_chrY_T0001388;gene_name=ENSG00000300757;ID=exon:HG002_chrY_T0001388:3;Name=ENSG00000300757;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18728694	18731509	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG002_chrY_T0001388;gene_id=HG002_chrY_G0000464;Parent=HG002_chrY_T0001388;transcript_name=HG002_chrY_T0001388;gene_name=ENSG00000300757;ID=intron:HG002_chrY_T0001388:3;Name=ENSG00000300757;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18731510	18731549	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG002_chrY_T0001388;gene_id=HG002_chrY_G0000464;Parent=HG002_chrY_T0001388;transcript_name=HG002_chrY_T0001388;gene_name=ENSG00000300757;ID=exon:HG002_chrY_T0001388:4;Name=ENSG00000300757;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18743539	18743866	.	-	.	source_gene_common_name=ELOCP6;source_gene=ENSG00000225740.1;alternative_source_transcripts=ENST00000429066.1;gene_id=HG002_chrY_G0000465;gene_biotype=processed_pseudogene;gene_name=ELOCP6;gene_sources=liftoff;ID=HG002_chrY_G0000465;Name=ELOCP6
HG002_chrY	CAT	transcript	18743539	18743866	1000	-	.	source_transcript=ENST00000429066.1;source_transcript_name=ELOCP6-201;source_gene=ENSG00000225740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000429066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429066.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP6;alternative_source_transcripts=ENST00000429066.1;transcript_id=HG002_chrY_T0001389;gene_id=HG002_chrY_G0000465;Parent=HG002_chrY_G0000465;transcript_name=HG002_chrY_T0001389;gene_name=ELOCP6;ID=HG002_chrY_T0001389;Name=ELOCP6
HG002_chrY	CAT	exon	18743539	18743866	.	-	.	source_transcript=ENST00000429066.1;source_transcript_name=ELOCP6-201;source_gene=ENSG00000225740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000429066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429066.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP6;alternative_source_transcripts=ENST00000429066.1;transcript_id=HG002_chrY_T0001389;gene_id=HG002_chrY_G0000465;Parent=HG002_chrY_T0001389;transcript_name=HG002_chrY_T0001389;gene_name=ELOCP6;ID=exon:HG002_chrY_T0001389:0;Name=ELOCP6;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18784595	18786555	.	-	.	source_gene_common_name=CDY2B;source_gene=ENSG00000129873.8;alternative_source_transcripts=ENST00000382867.4;gene_id=HG002_chrY_G0000466;gene_biotype=protein_coding;gene_name=CDY2B;gene_sources=liftoff;ID=HG002_chrY_G0000466;Name=CDY2B
HG002_chrY	CAT	transcript	18784595	18786555	100	-	.	source_transcript=ENST00000382867.4;source_transcript_name=CDY2B-201;source_gene=ENSG00000129873.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129873.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382867.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382867.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=ENST00000382867.4;transcript_id=HG002_chrY_T0001390;gene_id=HG002_chrY_G0000466;Parent=HG002_chrY_G0000466;transcript_name=HG002_chrY_T0001390;gene_name=CDY2B;ID=HG002_chrY_T0001390;Name=CDY2B
HG002_chrY	CAT	exon	18784595	18786555	.	-	.	source_transcript=ENST00000382867.4;source_transcript_name=CDY2B-201;source_gene=ENSG00000129873.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129873.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382867.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382867.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=ENST00000382867.4;transcript_id=HG002_chrY_T0001390;gene_id=HG002_chrY_G0000466;Parent=HG002_chrY_T0001390;transcript_name=HG002_chrY_T0001390;gene_name=CDY2B;ID=exon:HG002_chrY_T0001390:0;Name=CDY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	18784602	18786227	.	-	0	source_transcript=ENST00000382867.4;source_transcript_name=CDY2B-201;source_gene=ENSG00000129873.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129873.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382867.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382867.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=ENST00000382867.4;transcript_id=HG002_chrY_T0001390;gene_id=HG002_chrY_G0000466;Parent=HG002_chrY_T0001390;transcript_name=HG002_chrY_T0001390;gene_name=CDY2B;ID=CDS:HG002_chrY_T0001390:0;Name=CDY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	18784602	18784604	.	-	0	source_transcript=ENST00000382867.4;source_transcript_name=CDY2B-201;source_gene=ENSG00000129873.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129873.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382867.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382867.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=ENST00000382867.4;transcript_id=HG002_chrY_T0001390;gene_id=HG002_chrY_G0000466;Parent=HG002_chrY_T0001390;transcript_name=HG002_chrY_T0001390;gene_name=CDY2B;ID=stop_codon:HG002_chrY_T0001390;Name=CDY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	18786225	18786227	.	-	0	source_transcript=ENST00000382867.4;source_transcript_name=CDY2B-201;source_gene=ENSG00000129873.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129873.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382867.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382867.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=ENST00000382867.4;transcript_id=HG002_chrY_T0001390;gene_id=HG002_chrY_G0000466;Parent=HG002_chrY_T0001390;transcript_name=HG002_chrY_T0001390;gene_name=CDY2B;ID=start_codon:HG002_chrY_T0001390;Name=CDY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18788434	18790040	.	-	.	source_gene_common_name=CDY6P;source_gene=ENSG00000229138.1;alternative_source_transcripts=ENST00000413320.1;gene_id=HG002_chrY_G0000467;gene_biotype=unprocessed_pseudogene;gene_name=CDY6P;gene_sources=liftoff;ID=HG002_chrY_G0000467;Name=CDY6P
HG002_chrY	CAT	transcript	18788434	18790040	1000	-	.	source_transcript=ENST00000413320.1;source_transcript_name=CDY6P-201;source_gene=ENSG00000229138.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229138.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413320.1;transcript_score=299.921;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY6P;alternative_source_transcripts=ENST00000413320.1;transcript_id=HG002_chrY_T0001391;gene_id=HG002_chrY_G0000467;Parent=HG002_chrY_G0000467;transcript_name=HG002_chrY_T0001391;gene_name=CDY6P;ID=HG002_chrY_T0001391;Name=CDY6P
HG002_chrY	CAT	exon	18788434	18789633	.	-	.	source_transcript=ENST00000413320.1;source_transcript_name=CDY6P-201;source_gene=ENSG00000229138.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229138.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413320.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY6P;alternative_source_transcripts=ENST00000413320.1;transcript_id=HG002_chrY_T0001391;gene_id=HG002_chrY_G0000467;Parent=HG002_chrY_T0001391;transcript_name=HG002_chrY_T0001391;gene_name=CDY6P;ID=exon:HG002_chrY_T0001391:0;Name=CDY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18789634	18789974	.	-	.	source_transcript=ENST00000413320.1;source_transcript_name=CDY6P-201;source_gene=ENSG00000229138.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229138.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413320.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY6P;alternative_source_transcripts=ENST00000413320.1;transcript_id=HG002_chrY_T0001391;gene_id=HG002_chrY_G0000467;Parent=HG002_chrY_T0001391;transcript_name=HG002_chrY_T0001391;gene_name=CDY6P;ID=intron:HG002_chrY_T0001391:0;Name=CDY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18789975	18790040	.	-	.	source_transcript=ENST00000413320.1;source_transcript_name=CDY6P-201;source_gene=ENSG00000229138.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229138.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413320.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY6P;alternative_source_transcripts=ENST00000413320.1;transcript_id=HG002_chrY_T0001391;gene_id=HG002_chrY_G0000467;Parent=HG002_chrY_T0001391;transcript_name=HG002_chrY_T0001391;gene_name=CDY6P;ID=exon:HG002_chrY_T0001391:1;Name=CDY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18815086	18817134	.	+	.	source_gene_common_name=USP9YP7;source_gene=ENSG00000224485.1;alternative_source_transcripts=ENST00000436723.1;gene_id=HG002_chrY_G0000468;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP7;gene_sources=liftoff;ID=HG002_chrY_G0000468;Name=USP9YP7
HG002_chrY	CAT	transcript	18815086	18817134	1000	+	.	source_transcript=ENST00000436723.1;source_transcript_name=USP9YP7-201;source_gene=ENSG00000224485.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224485.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000436723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436723.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP7;alternative_source_transcripts=ENST00000436723.1;transcript_id=HG002_chrY_T0001392;gene_id=HG002_chrY_G0000468;Parent=HG002_chrY_G0000468;transcript_name=HG002_chrY_T0001392;gene_name=USP9YP7;ID=HG002_chrY_T0001392;Name=USP9YP7
HG002_chrY	CAT	exon	18815086	18815306	.	+	.	source_transcript=ENST00000436723.1;source_transcript_name=USP9YP7-201;source_gene=ENSG00000224485.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224485.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000436723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP7;alternative_source_transcripts=ENST00000436723.1;transcript_id=HG002_chrY_T0001392;gene_id=HG002_chrY_G0000468;Parent=HG002_chrY_T0001392;transcript_name=HG002_chrY_T0001392;gene_name=USP9YP7;ID=exon:HG002_chrY_T0001392:0;Name=USP9YP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18815307	18816925	.	+	.	source_transcript=ENST00000436723.1;source_transcript_name=USP9YP7-201;source_gene=ENSG00000224485.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224485.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000436723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP7;alternative_source_transcripts=ENST00000436723.1;transcript_id=HG002_chrY_T0001392;gene_id=HG002_chrY_G0000468;Parent=HG002_chrY_T0001392;transcript_name=HG002_chrY_T0001392;gene_name=USP9YP7;ID=intron:HG002_chrY_T0001392:0;Name=USP9YP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18816926	18817134	.	+	.	source_transcript=ENST00000436723.1;source_transcript_name=USP9YP7-201;source_gene=ENSG00000224485.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224485.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000436723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP7;alternative_source_transcripts=ENST00000436723.1;transcript_id=HG002_chrY_T0001392;gene_id=HG002_chrY_G0000468;Parent=HG002_chrY_T0001392;transcript_name=HG002_chrY_T0001392;gene_name=USP9YP7;ID=exon:HG002_chrY_T0001392:1;Name=USP9YP7;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18819035	18827975	.	-	.	source_gene_common_name=USP9YP6;source_gene=ENSG00000226116.1;alternative_source_transcripts=ENST00000413550.1;gene_id=HG002_chrY_G0000469;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP6;gene_sources=liftoff;ID=HG002_chrY_G0000469;Name=USP9YP6
HG002_chrY	CAT	transcript	18819035	18827975	1000	-	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1;transcript_id=HG002_chrY_T0001393;gene_id=HG002_chrY_G0000469;Parent=HG002_chrY_G0000469;transcript_name=HG002_chrY_T0001393;gene_name=USP9YP6;ID=HG002_chrY_T0001393;Name=USP9YP6
HG002_chrY	CAT	exon	18819035	18819159	.	-	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1;transcript_id=HG002_chrY_T0001393;gene_id=HG002_chrY_G0000469;Parent=HG002_chrY_T0001393;transcript_name=HG002_chrY_T0001393;gene_name=USP9YP6;ID=exon:HG002_chrY_T0001393:0;Name=USP9YP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18819160	18821296	.	-	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1;transcript_id=HG002_chrY_T0001393;gene_id=HG002_chrY_G0000469;Parent=HG002_chrY_T0001393;transcript_name=HG002_chrY_T0001393;gene_name=USP9YP6;ID=intron:HG002_chrY_T0001393:0;Name=USP9YP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18821297	18821381	.	-	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1;transcript_id=HG002_chrY_T0001393;gene_id=HG002_chrY_G0000469;Parent=HG002_chrY_T0001393;transcript_name=HG002_chrY_T0001393;gene_name=USP9YP6;ID=exon:HG002_chrY_T0001393:1;Name=USP9YP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18821382	18823367	.	-	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1;transcript_id=HG002_chrY_T0001393;gene_id=HG002_chrY_G0000469;Parent=HG002_chrY_T0001393;transcript_name=HG002_chrY_T0001393;gene_name=USP9YP6;ID=intron:HG002_chrY_T0001393:1;Name=USP9YP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18823368	18823568	.	-	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1;transcript_id=HG002_chrY_T0001393;gene_id=HG002_chrY_G0000469;Parent=HG002_chrY_T0001393;transcript_name=HG002_chrY_T0001393;gene_name=USP9YP6;ID=exon:HG002_chrY_T0001393:2;Name=USP9YP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18823569	18825368	.	-	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1;transcript_id=HG002_chrY_T0001393;gene_id=HG002_chrY_G0000469;Parent=HG002_chrY_T0001393;transcript_name=HG002_chrY_T0001393;gene_name=USP9YP6;ID=intron:HG002_chrY_T0001393:2;Name=USP9YP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18825369	18825589	.	-	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1;transcript_id=HG002_chrY_T0001393;gene_id=HG002_chrY_G0000469;Parent=HG002_chrY_T0001393;transcript_name=HG002_chrY_T0001393;gene_name=USP9YP6;ID=exon:HG002_chrY_T0001393:3;Name=USP9YP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18825590	18827753	.	-	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1;transcript_id=HG002_chrY_T0001393;gene_id=HG002_chrY_G0000469;Parent=HG002_chrY_T0001393;transcript_name=HG002_chrY_T0001393;gene_name=USP9YP6;ID=intron:HG002_chrY_T0001393:3;Name=USP9YP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18827754	18827975	.	-	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1;transcript_id=HG002_chrY_T0001393;gene_id=HG002_chrY_G0000469;Parent=HG002_chrY_T0001393;transcript_name=HG002_chrY_T0001393;gene_name=USP9YP6;ID=exon:HG002_chrY_T0001393:4;Name=USP9YP6;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18858775	18860686	.	-	.	source_gene_common_name=CDY7P;source_gene=ENSG00000237558.1;alternative_source_transcripts=ENST00000429883.1,ENST00000429883.1;gene_id=HG002_chrY_G0000470;gene_biotype=unprocessed_pseudogene;gene_name=CDY7P;gene_sources=liftoff;ID=HG002_chrY_G0000470;Name=CDY7P
HG002_chrY	CAT	transcript	18858775	18860686	1000	-	.	source_transcript=ENST00000429883.1;source_transcript_name=CDY7P-201;source_gene=ENSG00000237558.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237558.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429883.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429883.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY7P;alternative_source_transcripts=ENST00000429883.1,ENST00000429883.1;transcript_id=HG002_chrY_T0001394;gene_id=HG002_chrY_G0000470;Parent=HG002_chrY_G0000470;transcript_name=HG002_chrY_T0001394;gene_name=CDY7P;ID=HG002_chrY_T0001394;Name=CDY7P
HG002_chrY	CAT	exon	18858775	18860213	.	-	.	source_transcript=ENST00000429883.1;source_transcript_name=CDY7P-201;source_gene=ENSG00000237558.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237558.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429883.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429883.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY7P;alternative_source_transcripts=ENST00000429883.1,ENST00000429883.1;transcript_id=HG002_chrY_T0001394;gene_id=HG002_chrY_G0000470;Parent=HG002_chrY_T0001394;transcript_name=HG002_chrY_T0001394;gene_name=CDY7P;ID=exon:HG002_chrY_T0001394:0;Name=CDY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18860214	18860521	.	-	.	source_transcript=ENST00000429883.1;source_transcript_name=CDY7P-201;source_gene=ENSG00000237558.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237558.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429883.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429883.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY7P;alternative_source_transcripts=ENST00000429883.1,ENST00000429883.1;transcript_id=HG002_chrY_T0001394;gene_id=HG002_chrY_G0000470;Parent=HG002_chrY_T0001394;transcript_name=HG002_chrY_T0001394;gene_name=CDY7P;ID=intron:HG002_chrY_T0001394:0;Name=CDY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18860522	18860686	.	-	.	source_transcript=ENST00000429883.1;source_transcript_name=CDY7P-201;source_gene=ENSG00000237558.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237558.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429883.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429883.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY7P;alternative_source_transcripts=ENST00000429883.1,ENST00000429883.1;transcript_id=HG002_chrY_T0001394;gene_id=HG002_chrY_G0000470;Parent=HG002_chrY_T0001394;transcript_name=HG002_chrY_T0001394;gene_name=CDY7P;ID=exon:HG002_chrY_T0001394:1;Name=CDY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18890602	18899516	.	+	.	source_gene_common_name=USP9YP34;source_gene=ENSG00000233378.1;alternative_source_transcripts=ENST00000453983.1;gene_id=HG002_chrY_G0000471;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP34;gene_sources=liftoff;ID=HG002_chrY_G0000471;Name=USP9YP34
HG002_chrY	CAT	transcript	18890602	18899516	1000	+	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;alternative_source_transcripts=ENST00000453983.1;transcript_id=HG002_chrY_T0001395;gene_id=HG002_chrY_G0000471;Parent=HG002_chrY_G0000471;transcript_name=HG002_chrY_T0001395;gene_name=USP9YP34;ID=HG002_chrY_T0001395;Name=USP9YP34
HG002_chrY	CAT	exon	18890602	18890822	.	+	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;alternative_source_transcripts=ENST00000453983.1;transcript_id=HG002_chrY_T0001395;gene_id=HG002_chrY_G0000471;Parent=HG002_chrY_T0001395;transcript_name=HG002_chrY_T0001395;gene_name=USP9YP34;ID=exon:HG002_chrY_T0001395:0;Name=USP9YP34;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18890823	18892989	.	+	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;alternative_source_transcripts=ENST00000453983.1;transcript_id=HG002_chrY_T0001395;gene_id=HG002_chrY_G0000471;Parent=HG002_chrY_T0001395;transcript_name=HG002_chrY_T0001395;gene_name=USP9YP34;ID=intron:HG002_chrY_T0001395:0;Name=USP9YP34;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18892990	18893208	.	+	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;alternative_source_transcripts=ENST00000453983.1;transcript_id=HG002_chrY_T0001395;gene_id=HG002_chrY_G0000471;Parent=HG002_chrY_T0001395;transcript_name=HG002_chrY_T0001395;gene_name=USP9YP34;ID=exon:HG002_chrY_T0001395:1;Name=USP9YP34;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18893209	18895008	.	+	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;alternative_source_transcripts=ENST00000453983.1;transcript_id=HG002_chrY_T0001395;gene_id=HG002_chrY_G0000471;Parent=HG002_chrY_T0001395;transcript_name=HG002_chrY_T0001395;gene_name=USP9YP34;ID=intron:HG002_chrY_T0001395:1;Name=USP9YP34;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18895009	18895198	.	+	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;alternative_source_transcripts=ENST00000453983.1;transcript_id=HG002_chrY_T0001395;gene_id=HG002_chrY_G0000471;Parent=HG002_chrY_T0001395;transcript_name=HG002_chrY_T0001395;gene_name=USP9YP34;ID=exon:HG002_chrY_T0001395:2;Name=USP9YP34;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18895199	18897193	.	+	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;alternative_source_transcripts=ENST00000453983.1;transcript_id=HG002_chrY_T0001395;gene_id=HG002_chrY_G0000471;Parent=HG002_chrY_T0001395;transcript_name=HG002_chrY_T0001395;gene_name=USP9YP34;ID=intron:HG002_chrY_T0001395:2;Name=USP9YP34;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18897194	18897278	.	+	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;alternative_source_transcripts=ENST00000453983.1;transcript_id=HG002_chrY_T0001395;gene_id=HG002_chrY_G0000471;Parent=HG002_chrY_T0001395;transcript_name=HG002_chrY_T0001395;gene_name=USP9YP34;ID=exon:HG002_chrY_T0001395:3;Name=USP9YP34;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18897279	18899423	.	+	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;alternative_source_transcripts=ENST00000453983.1;transcript_id=HG002_chrY_T0001395;gene_id=HG002_chrY_G0000471;Parent=HG002_chrY_T0001395;transcript_name=HG002_chrY_T0001395;gene_name=USP9YP34;ID=intron:HG002_chrY_T0001395:3;Name=USP9YP34;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18899424	18899516	.	+	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;alternative_source_transcripts=ENST00000453983.1;transcript_id=HG002_chrY_T0001395;gene_id=HG002_chrY_G0000471;Parent=HG002_chrY_T0001395;transcript_name=HG002_chrY_T0001395;gene_name=USP9YP34;ID=exon:HG002_chrY_T0001395:4;Name=USP9YP34;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18901457	18903505	.	-	.	source_gene_common_name=USP9YP32;source_gene=ENSG00000237616.1;alternative_source_transcripts=ENST00000452432.1;gene_id=HG002_chrY_G0000472;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP32;gene_sources=liftoff;ID=HG002_chrY_G0000472;Name=USP9YP32
HG002_chrY	CAT	transcript	18901457	18903505	1000	-	.	source_transcript=ENST00000452432.1;source_transcript_name=USP9YP32-201;source_gene=ENSG00000237616.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237616.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452432.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP32;alternative_source_transcripts=ENST00000452432.1;transcript_id=HG002_chrY_T0001396;gene_id=HG002_chrY_G0000472;Parent=HG002_chrY_G0000472;transcript_name=HG002_chrY_T0001396;gene_name=USP9YP32;ID=HG002_chrY_T0001396;Name=USP9YP32
HG002_chrY	CAT	exon	18901457	18901665	.	-	.	source_transcript=ENST00000452432.1;source_transcript_name=USP9YP32-201;source_gene=ENSG00000237616.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237616.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP32;alternative_source_transcripts=ENST00000452432.1;transcript_id=HG002_chrY_T0001396;gene_id=HG002_chrY_G0000472;Parent=HG002_chrY_T0001396;transcript_name=HG002_chrY_T0001396;gene_name=USP9YP32;ID=exon:HG002_chrY_T0001396:0;Name=USP9YP32;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18901666	18903284	.	-	.	source_transcript=ENST00000452432.1;source_transcript_name=USP9YP32-201;source_gene=ENSG00000237616.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237616.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP32;alternative_source_transcripts=ENST00000452432.1;transcript_id=HG002_chrY_T0001396;gene_id=HG002_chrY_G0000472;Parent=HG002_chrY_T0001396;transcript_name=HG002_chrY_T0001396;gene_name=USP9YP32;ID=intron:HG002_chrY_T0001396:0;Name=USP9YP32;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18903285	18903505	.	-	.	source_transcript=ENST00000452432.1;source_transcript_name=USP9YP32-201;source_gene=ENSG00000237616.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237616.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP32;alternative_source_transcripts=ENST00000452432.1;transcript_id=HG002_chrY_T0001396;gene_id=HG002_chrY_G0000472;Parent=HG002_chrY_T0001396;transcript_name=HG002_chrY_T0001396;gene_name=USP9YP32;ID=exon:HG002_chrY_T0001396:1;Name=USP9YP32;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18928551	18930157	.	+	.	source_gene_common_name=CDY8P;source_gene=ENSG00000224033.1;alternative_source_transcripts=ENST00000428380.1;gene_id=HG002_chrY_G0000473;gene_biotype=unprocessed_pseudogene;gene_name=CDY8P;gene_sources=liftoff;ID=HG002_chrY_G0000473;Name=CDY8P
HG002_chrY	CAT	transcript	18928551	18930157	1000	+	.	source_transcript=ENST00000428380.1;source_transcript_name=CDY8P-201;source_gene=ENSG00000224033.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224033.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000428380.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428380.1;transcript_score=299.922;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY8P;alternative_source_transcripts=ENST00000428380.1;transcript_id=HG002_chrY_T0001397;gene_id=HG002_chrY_G0000473;Parent=HG002_chrY_G0000473;transcript_name=HG002_chrY_T0001397;gene_name=CDY8P;ID=HG002_chrY_T0001397;Name=CDY8P
HG002_chrY	CAT	exon	18928551	18928616	.	+	.	source_transcript=ENST00000428380.1;source_transcript_name=CDY8P-201;source_gene=ENSG00000224033.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224033.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000428380.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428380.1;transcript_score=299.922;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY8P;alternative_source_transcripts=ENST00000428380.1;transcript_id=HG002_chrY_T0001397;gene_id=HG002_chrY_G0000473;Parent=HG002_chrY_T0001397;transcript_name=HG002_chrY_T0001397;gene_name=CDY8P;ID=exon:HG002_chrY_T0001397:0;Name=CDY8P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18928617	18928944	.	+	.	source_transcript=ENST00000428380.1;source_transcript_name=CDY8P-201;source_gene=ENSG00000224033.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224033.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000428380.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428380.1;transcript_score=299.922;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY8P;alternative_source_transcripts=ENST00000428380.1;transcript_id=HG002_chrY_T0001397;gene_id=HG002_chrY_G0000473;Parent=HG002_chrY_T0001397;transcript_name=HG002_chrY_T0001397;gene_name=CDY8P;ID=intron:HG002_chrY_T0001397:0;Name=CDY8P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18928945	18930157	.	+	.	source_transcript=ENST00000428380.1;source_transcript_name=CDY8P-201;source_gene=ENSG00000224033.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224033.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000428380.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428380.1;transcript_score=299.922;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY8P;alternative_source_transcripts=ENST00000428380.1;transcript_id=HG002_chrY_T0001397;gene_id=HG002_chrY_G0000473;Parent=HG002_chrY_T0001397;transcript_name=HG002_chrY_T0001397;gene_name=CDY8P;ID=exon:HG002_chrY_T0001397:1;Name=CDY8P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18932036	18933995	.	+	.	source_gene_common_name=CDY2A;source_gene=ENSG00000182415.11;alternative_source_transcripts=ENST00000250838.6;gene_id=HG002_chrY_G0000474;gene_biotype=protein_coding;gene_name=CDY2A;gene_sources=liftoff;ID=HG002_chrY_G0000474;Name=CDY2A
HG002_chrY	CAT	transcript	18932036	18933995	100	+	.	source_transcript=ENST00000250838.6;source_transcript_name=CDY2A-201;source_gene=ENSG00000182415.11;source_gene_biotype=protein_coding;original_gene_id=ENSG00000182415.11;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250838.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250838.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=ENST00000250838.6;transcript_id=HG002_chrY_T0001398;gene_id=HG002_chrY_G0000474;Parent=HG002_chrY_G0000474;transcript_name=HG002_chrY_T0001398;gene_name=CDY2A;ID=HG002_chrY_T0001398;Name=CDY2A
HG002_chrY	CAT	exon	18932036	18933995	.	+	.	source_transcript=ENST00000250838.6;source_transcript_name=CDY2A-201;source_gene=ENSG00000182415.11;source_gene_biotype=protein_coding;original_gene_id=ENSG00000182415.11;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250838.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250838.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=ENST00000250838.6;transcript_id=HG002_chrY_T0001398;gene_id=HG002_chrY_G0000474;Parent=HG002_chrY_T0001398;transcript_name=HG002_chrY_T0001398;gene_name=CDY2A;ID=exon:HG002_chrY_T0001398:0;Name=CDY2A;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	18932364	18933989	.	+	0	source_transcript=ENST00000250838.6;source_transcript_name=CDY2A-201;source_gene=ENSG00000182415.11;source_gene_biotype=protein_coding;original_gene_id=ENSG00000182415.11;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250838.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250838.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=ENST00000250838.6;transcript_id=HG002_chrY_T0001398;gene_id=HG002_chrY_G0000474;Parent=HG002_chrY_T0001398;transcript_name=HG002_chrY_T0001398;gene_name=CDY2A;ID=CDS:HG002_chrY_T0001398:0;Name=CDY2A;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	18932364	18932366	.	+	0	source_transcript=ENST00000250838.6;source_transcript_name=CDY2A-201;source_gene=ENSG00000182415.11;source_gene_biotype=protein_coding;original_gene_id=ENSG00000182415.11;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250838.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250838.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=ENST00000250838.6;transcript_id=HG002_chrY_T0001398;gene_id=HG002_chrY_G0000474;Parent=HG002_chrY_T0001398;transcript_name=HG002_chrY_T0001398;gene_name=CDY2A;ID=start_codon:HG002_chrY_T0001398;Name=CDY2A;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	18933987	18933989	.	+	0	source_transcript=ENST00000250838.6;source_transcript_name=CDY2A-201;source_gene=ENSG00000182415.11;source_gene_biotype=protein_coding;original_gene_id=ENSG00000182415.11;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250838.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250838.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=ENST00000250838.6;transcript_id=HG002_chrY_T0001398;gene_id=HG002_chrY_G0000474;Parent=HG002_chrY_T0001398;transcript_name=HG002_chrY_T0001398;gene_name=CDY2A;ID=stop_codon:HG002_chrY_T0001398;Name=CDY2A;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18963013	18994380	.	-	.	source_gene_common_name=ENSG00000297434;source_gene=ENSG00000297434.1;gene_id=HG002_chrY_G0000475;gene_biotype=lncRNA;gene_name=ENSG00000297434;gene_sources=liftoff;ID=HG002_chrY_G0000475;Name=ENSG00000297434
HG002_chrY	CAT	transcript	18963013	18994380	1000	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001399;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_G0000475;transcript_name=HG002_chrY_T0001399;gene_name=ENSG00000297434;ID=HG002_chrY_T0001399;Name=ENSG00000297434
HG002_chrY	CAT	exon	18963013	18963131	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001399;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001399;transcript_name=HG002_chrY_T0001399;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001399:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18963132	18966591	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001399;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001399;transcript_name=HG002_chrY_T0001399;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001399:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18966592	18966847	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001399;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001399;transcript_name=HG002_chrY_T0001399;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001399:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18966848	18979772	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001399;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001399;transcript_name=HG002_chrY_T0001399;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001399:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18979773	18979985	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001399;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001399;transcript_name=HG002_chrY_T0001399;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001399:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18979986	18985430	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001399;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001399;transcript_name=HG002_chrY_T0001399;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001399:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18985431	18985570	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001399;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001399;transcript_name=HG002_chrY_T0001399;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001399:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18985571	18986881	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001399;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001399;transcript_name=HG002_chrY_T0001399;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001399:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18986882	18987079	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001399;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001399;transcript_name=HG002_chrY_T0001399;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001399:4;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18987080	18989894	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001399;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001399;transcript_name=HG002_chrY_T0001399;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001399:4;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18989895	18989968	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001399;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001399;transcript_name=HG002_chrY_T0001399;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001399:5;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18989969	18991816	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001399;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001399;transcript_name=HG002_chrY_T0001399;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001399:5;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18991817	18991924	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001399;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001399;transcript_name=HG002_chrY_T0001399;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001399:6;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18991925	18993497	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001399;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001399;transcript_name=HG002_chrY_T0001399;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001399:6;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18993498	18993632	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001399;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001399;transcript_name=HG002_chrY_T0001399;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001399:7;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18993633	18994347	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001399;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001399;transcript_name=HG002_chrY_T0001399;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001399:7;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18994348	18994380	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001399;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001399;transcript_name=HG002_chrY_T0001399;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001399:8;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18985508	18994272	1000	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001401;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_G0000475;transcript_name=HG002_chrY_T0001401;gene_name=ENSG00000297434;ID=HG002_chrY_T0001401;Name=ENSG00000297434
HG002_chrY	CAT	exon	18985508	18985570	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001401;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001401;transcript_name=HG002_chrY_T0001401;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001401:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18985571	18986877	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001401;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001401;transcript_name=HG002_chrY_T0001401;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001401:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18986878	18987079	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001401;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001401;transcript_name=HG002_chrY_T0001401;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001401:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18987080	18989894	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001401;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001401;transcript_name=HG002_chrY_T0001401;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001401:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18989895	18989968	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001401;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001401;transcript_name=HG002_chrY_T0001401;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001401:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18989969	18991816	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001401;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001401;transcript_name=HG002_chrY_T0001401;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001401:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18991817	18991924	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001401;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001401;transcript_name=HG002_chrY_T0001401;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001401:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18991925	18993497	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001401;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001401;transcript_name=HG002_chrY_T0001401;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001401:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18993498	18993632	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001401;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001401;transcript_name=HG002_chrY_T0001401;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001401:4;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18993633	18993942	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001401;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001401;transcript_name=HG002_chrY_T0001401;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001401:4;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18993943	18994272	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001401;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001401;transcript_name=HG002_chrY_T0001401;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001401:5;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18985508	18992315	1000	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001402;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_G0000475;transcript_name=HG002_chrY_T0001402;gene_name=ENSG00000297434;ID=HG002_chrY_T0001402;Name=ENSG00000297434
HG002_chrY	CAT	exon	18985508	18985570	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001402;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001402;transcript_name=HG002_chrY_T0001402;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001402:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18985571	18986877	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001402;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001402;transcript_name=HG002_chrY_T0001402;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001402:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18986878	18987079	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001402;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001402;transcript_name=HG002_chrY_T0001402;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001402:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18987080	18989894	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001402;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001402;transcript_name=HG002_chrY_T0001402;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001402:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18989895	18989968	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001402;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001402;transcript_name=HG002_chrY_T0001402;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001402:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18989969	18991816	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001402;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001402;transcript_name=HG002_chrY_T0001402;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001402:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18991817	18991924	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001402;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001402;transcript_name=HG002_chrY_T0001402;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001402:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18991925	18992197	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001402;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001402;transcript_name=HG002_chrY_T0001402;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001402:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18992198	18992315	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001402;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001402;transcript_name=HG002_chrY_T0001402;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001402:4;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18985509	18993815	1000	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001403;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_G0000475;transcript_name=HG002_chrY_T0001403;gene_name=ENSG00000297434;ID=HG002_chrY_T0001403;Name=ENSG00000297434
HG002_chrY	CAT	exon	18985509	18985570	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001403;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001403;transcript_name=HG002_chrY_T0001403;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001403:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18985571	18986881	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001403;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001403;transcript_name=HG002_chrY_T0001403;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001403:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18986882	18987079	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001403;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001403;transcript_name=HG002_chrY_T0001403;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001403:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18987080	18989894	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001403;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001403;transcript_name=HG002_chrY_T0001403;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001403:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18989895	18989968	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001403;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001403;transcript_name=HG002_chrY_T0001403;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001403:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18989969	18991805	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001403;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001403;transcript_name=HG002_chrY_T0001403;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001403:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18991806	18991924	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001403;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001403;transcript_name=HG002_chrY_T0001403;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001403:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18991925	18993497	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001403;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001403;transcript_name=HG002_chrY_T0001403;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001403:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18993498	18993815	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001403;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001403;transcript_name=HG002_chrY_T0001403;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001403:4;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18985510	18992310	1000	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001404;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_G0000475;transcript_name=HG002_chrY_T0001404;gene_name=ENSG00000297434;ID=HG002_chrY_T0001404;Name=ENSG00000297434
HG002_chrY	CAT	exon	18985510	18985570	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001404;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001404;transcript_name=HG002_chrY_T0001404;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001404:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18985571	18986877	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001404;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001404;transcript_name=HG002_chrY_T0001404;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001404:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18986878	18987079	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001404;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001404;transcript_name=HG002_chrY_T0001404;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001404:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18987080	18989894	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001404;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001404;transcript_name=HG002_chrY_T0001404;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001404:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18989895	18989968	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001404;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001404;transcript_name=HG002_chrY_T0001404;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001404:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18989969	18991805	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001404;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001404;transcript_name=HG002_chrY_T0001404;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001404:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18991806	18991924	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001404;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001404;transcript_name=HG002_chrY_T0001404;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001404:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18991925	18992197	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001404;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001404;transcript_name=HG002_chrY_T0001404;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001404:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18992198	18992310	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001404;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001404;transcript_name=HG002_chrY_T0001404;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001404:4;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18985511	18992310	1000	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001405;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_G0000475;transcript_name=HG002_chrY_T0001405;gene_name=ENSG00000297434;ID=HG002_chrY_T0001405;Name=ENSG00000297434
HG002_chrY	CAT	exon	18985511	18985570	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001405;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001405;transcript_name=HG002_chrY_T0001405;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001405:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18985571	18986877	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001405;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001405;transcript_name=HG002_chrY_T0001405;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001405:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18986878	18987079	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001405;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001405;transcript_name=HG002_chrY_T0001405;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001405:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18987080	18988722	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001405;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001405;transcript_name=HG002_chrY_T0001405;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001405:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18988723	18988790	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001405;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001405;transcript_name=HG002_chrY_T0001405;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001405:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18988791	18989894	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001405;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001405;transcript_name=HG002_chrY_T0001405;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001405:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18989895	18989968	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001405;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001405;transcript_name=HG002_chrY_T0001405;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001405:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18989969	18991816	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001405;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001405;transcript_name=HG002_chrY_T0001405;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001405:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18991817	18991924	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001405;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001405;transcript_name=HG002_chrY_T0001405;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001405:4;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18991925	18992197	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001405;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001405;transcript_name=HG002_chrY_T0001405;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001405:4;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18992198	18992310	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001405;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001405;transcript_name=HG002_chrY_T0001405;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001405:5;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18991730	18993825	1000	-	.	source_transcript=ENST00000747894.1;source_transcript_name=ENST00000747894;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747894.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001407;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_G0000475;transcript_name=HG002_chrY_T0001407;gene_name=ENSG00000297434;ID=HG002_chrY_T0001407;Name=ENSG00000297434
HG002_chrY	CAT	exon	18991730	18991924	.	-	.	source_transcript=ENST00000747894.1;source_transcript_name=ENST00000747894;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747894.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001407;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001407;transcript_name=HG002_chrY_T0001407;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001407:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18991925	18993497	.	-	.	source_transcript=ENST00000747894.1;source_transcript_name=ENST00000747894;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747894.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001407;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001407;transcript_name=HG002_chrY_T0001407;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001407:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18993498	18993638	.	-	.	source_transcript=ENST00000747894.1;source_transcript_name=ENST00000747894;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747894.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001407;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001407;transcript_name=HG002_chrY_T0001407;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001407:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18993639	18993741	.	-	.	source_transcript=ENST00000747894.1;source_transcript_name=ENST00000747894;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747894.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001407;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001407;transcript_name=HG002_chrY_T0001407;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001407:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18993742	18993825	.	-	.	source_transcript=ENST00000747894.1;source_transcript_name=ENST00000747894;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747894.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001407;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001407;transcript_name=HG002_chrY_T0001407;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001407:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	18991733	18993617	1000	-	.	source_transcript=ENST00000747895.1;source_transcript_name=ENST00000747895;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747895.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001408;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_G0000475;transcript_name=HG002_chrY_T0001408;gene_name=ENSG00000297434;ID=HG002_chrY_T0001408;Name=ENSG00000297434
HG002_chrY	CAT	exon	18991733	18991924	.	-	.	source_transcript=ENST00000747895.1;source_transcript_name=ENST00000747895;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747895.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001408;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001408;transcript_name=HG002_chrY_T0001408;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001408:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18991925	18993497	.	-	.	source_transcript=ENST00000747895.1;source_transcript_name=ENST00000747895;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747895.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001408;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001408;transcript_name=HG002_chrY_T0001408;gene_name=ENSG00000297434;ID=intron:HG002_chrY_T0001408:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18993498	18993617	.	-	.	source_transcript=ENST00000747895.1;source_transcript_name=ENST00000747895;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747895.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG002_chrY_T0001408;gene_id=HG002_chrY_G0000475;Parent=HG002_chrY_T0001408;transcript_name=HG002_chrY_T0001408;gene_name=ENSG00000297434;ID=exon:HG002_chrY_T0001408:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18974729	18975056	.	+	.	source_gene_common_name=ELOCP12;source_gene=ENSG00000230412.1;alternative_source_transcripts=ENST00000458706.1;gene_id=HG002_chrY_G0000476;gene_biotype=processed_pseudogene;gene_name=ELOCP12;gene_sources=liftoff;ID=HG002_chrY_G0000476;Name=ELOCP12
HG002_chrY	CAT	transcript	18974729	18975056	1000	+	.	source_transcript=ENST00000458706.1;source_transcript_name=ELOCP12-201;source_gene=ENSG00000230412.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000230412.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000458706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458706.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP12;alternative_source_transcripts=ENST00000458706.1;transcript_id=HG002_chrY_T0001400;gene_id=HG002_chrY_G0000476;Parent=HG002_chrY_G0000476;transcript_name=HG002_chrY_T0001400;gene_name=ELOCP12;ID=HG002_chrY_T0001400;Name=ELOCP12
HG002_chrY	CAT	exon	18974729	18975056	.	+	.	source_transcript=ENST00000458706.1;source_transcript_name=ELOCP12-201;source_gene=ENSG00000230412.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000230412.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000458706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458706.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP12;alternative_source_transcripts=ENST00000458706.1;transcript_id=HG002_chrY_T0001400;gene_id=HG002_chrY_G0000476;Parent=HG002_chrY_T0001400;transcript_name=HG002_chrY_T0001400;gene_name=ELOCP12;ID=exon:HG002_chrY_T0001400:0;Name=ELOCP12;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	18986931	19002453	.	-	.	source_gene_common_name=OFD1P2Y;source_gene=ENSG00000226611.2;gene_id=HG002_chrY_G0000477;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=OFD1P2Y;gene_sources=liftoff;ID=HG002_chrY_G0000477;Name=OFD1P2Y
HG002_chrY	CAT	transcript	18986931	19002453	1000	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG002_chrY_T0001406;gene_id=HG002_chrY_G0000477;Parent=HG002_chrY_G0000477;transcript_name=HG002_chrY_T0001406;gene_name=OFD1P2Y;ID=HG002_chrY_T0001406;Name=OFD1P2Y
HG002_chrY	CAT	exon	18986931	18987079	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG002_chrY_T0001406;gene_id=HG002_chrY_G0000477;Parent=HG002_chrY_T0001406;transcript_name=HG002_chrY_T0001406;gene_name=OFD1P2Y;ID=exon:HG002_chrY_T0001406:0;Name=OFD1P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18987080	18988722	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG002_chrY_T0001406;gene_id=HG002_chrY_G0000477;Parent=HG002_chrY_T0001406;transcript_name=HG002_chrY_T0001406;gene_name=OFD1P2Y;ID=intron:HG002_chrY_T0001406:0;Name=OFD1P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18988723	18988790	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG002_chrY_T0001406;gene_id=HG002_chrY_G0000477;Parent=HG002_chrY_T0001406;transcript_name=HG002_chrY_T0001406;gene_name=OFD1P2Y;ID=exon:HG002_chrY_T0001406:1;Name=OFD1P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18988791	18989894	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG002_chrY_T0001406;gene_id=HG002_chrY_G0000477;Parent=HG002_chrY_T0001406;transcript_name=HG002_chrY_T0001406;gene_name=OFD1P2Y;ID=intron:HG002_chrY_T0001406:1;Name=OFD1P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18989895	18989968	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG002_chrY_T0001406;gene_id=HG002_chrY_G0000477;Parent=HG002_chrY_T0001406;transcript_name=HG002_chrY_T0001406;gene_name=OFD1P2Y;ID=exon:HG002_chrY_T0001406:2;Name=OFD1P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18989969	18991805	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG002_chrY_T0001406;gene_id=HG002_chrY_G0000477;Parent=HG002_chrY_T0001406;transcript_name=HG002_chrY_T0001406;gene_name=OFD1P2Y;ID=intron:HG002_chrY_T0001406:2;Name=OFD1P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18991806	18991924	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG002_chrY_T0001406;gene_id=HG002_chrY_G0000477;Parent=HG002_chrY_T0001406;transcript_name=HG002_chrY_T0001406;gene_name=OFD1P2Y;ID=exon:HG002_chrY_T0001406:3;Name=OFD1P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18991925	18993229	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG002_chrY_T0001406;gene_id=HG002_chrY_G0000477;Parent=HG002_chrY_T0001406;transcript_name=HG002_chrY_T0001406;gene_name=OFD1P2Y;ID=intron:HG002_chrY_T0001406:3;Name=OFD1P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18993230	18993335	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG002_chrY_T0001406;gene_id=HG002_chrY_G0000477;Parent=HG002_chrY_T0001406;transcript_name=HG002_chrY_T0001406;gene_name=OFD1P2Y;ID=exon:HG002_chrY_T0001406:4;Name=OFD1P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18993336	18996424	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG002_chrY_T0001406;gene_id=HG002_chrY_G0000477;Parent=HG002_chrY_T0001406;transcript_name=HG002_chrY_T0001406;gene_name=OFD1P2Y;ID=intron:HG002_chrY_T0001406:4;Name=OFD1P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18996425	18996571	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG002_chrY_T0001406;gene_id=HG002_chrY_G0000477;Parent=HG002_chrY_T0001406;transcript_name=HG002_chrY_T0001406;gene_name=OFD1P2Y;ID=exon:HG002_chrY_T0001406:5;Name=OFD1P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18996572	18996895	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG002_chrY_T0001406;gene_id=HG002_chrY_G0000477;Parent=HG002_chrY_T0001406;transcript_name=HG002_chrY_T0001406;gene_name=OFD1P2Y;ID=intron:HG002_chrY_T0001406:5;Name=OFD1P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18996896	18997032	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG002_chrY_T0001406;gene_id=HG002_chrY_G0000477;Parent=HG002_chrY_T0001406;transcript_name=HG002_chrY_T0001406;gene_name=OFD1P2Y;ID=exon:HG002_chrY_T0001406:6;Name=OFD1P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18997033	18998555	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG002_chrY_T0001406;gene_id=HG002_chrY_G0000477;Parent=HG002_chrY_T0001406;transcript_name=HG002_chrY_T0001406;gene_name=OFD1P2Y;ID=intron:HG002_chrY_T0001406:6;Name=OFD1P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18998556	18998586	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG002_chrY_T0001406;gene_id=HG002_chrY_G0000477;Parent=HG002_chrY_T0001406;transcript_name=HG002_chrY_T0001406;gene_name=OFD1P2Y;ID=exon:HG002_chrY_T0001406:7;Name=OFD1P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18998587	18998671	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG002_chrY_T0001406;gene_id=HG002_chrY_G0000477;Parent=HG002_chrY_T0001406;transcript_name=HG002_chrY_T0001406;gene_name=OFD1P2Y;ID=intron:HG002_chrY_T0001406:7;Name=OFD1P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	18998672	18998739	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG002_chrY_T0001406;gene_id=HG002_chrY_G0000477;Parent=HG002_chrY_T0001406;transcript_name=HG002_chrY_T0001406;gene_name=OFD1P2Y;ID=exon:HG002_chrY_T0001406:8;Name=OFD1P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	18998740	19000933	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG002_chrY_T0001406;gene_id=HG002_chrY_G0000477;Parent=HG002_chrY_T0001406;transcript_name=HG002_chrY_T0001406;gene_name=OFD1P2Y;ID=intron:HG002_chrY_T0001406:8;Name=OFD1P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19000934	19001134	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG002_chrY_T0001406;gene_id=HG002_chrY_G0000477;Parent=HG002_chrY_T0001406;transcript_name=HG002_chrY_T0001406;gene_name=OFD1P2Y;ID=exon:HG002_chrY_T0001406:9;Name=OFD1P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19001135	19002355	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG002_chrY_T0001406;gene_id=HG002_chrY_G0000477;Parent=HG002_chrY_T0001406;transcript_name=HG002_chrY_T0001406;gene_name=OFD1P2Y;ID=intron:HG002_chrY_T0001406:9;Name=OFD1P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19002356	19002453	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG002_chrY_T0001406;gene_id=HG002_chrY_G0000477;Parent=HG002_chrY_T0001406;transcript_name=HG002_chrY_T0001406;gene_name=OFD1P2Y;ID=exon:HG002_chrY_T0001406:10;Name=OFD1P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19011564	19014277	.	+	.	source_gene_common_name=TRAPPC2P3;source_gene=ENSG00000224964.1;gene_id=HG002_chrY_G0000478;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P3;gene_sources=liftoff;ID=HG002_chrY_G0000478;Name=TRAPPC2P3
HG002_chrY	CAT	transcript	19011564	19014277	1000	+	.	source_transcript=ENST00000443200.1;source_transcript_name=TRAPPC2P3-201;source_gene=ENSG00000224964.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224964.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443200.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P3;transcript_id=HG002_chrY_T0001409;gene_id=HG002_chrY_G0000478;Parent=HG002_chrY_G0000478;transcript_name=HG002_chrY_T0001409;gene_name=TRAPPC2P3;ID=HG002_chrY_T0001409;Name=TRAPPC2P3
HG002_chrY	CAT	exon	19011564	19011656	.	+	.	source_transcript=ENST00000443200.1;source_transcript_name=TRAPPC2P3-201;source_gene=ENSG00000224964.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224964.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P3;transcript_id=HG002_chrY_T0001409;gene_id=HG002_chrY_G0000478;Parent=HG002_chrY_T0001409;transcript_name=HG002_chrY_T0001409;gene_name=TRAPPC2P3;ID=exon:HG002_chrY_T0001409:0;Name=TRAPPC2P3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19011657	19013608	.	+	.	source_transcript=ENST00000443200.1;source_transcript_name=TRAPPC2P3-201;source_gene=ENSG00000224964.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224964.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P3;transcript_id=HG002_chrY_T0001409;gene_id=HG002_chrY_G0000478;Parent=HG002_chrY_T0001409;transcript_name=HG002_chrY_T0001409;gene_name=TRAPPC2P3;ID=intron:HG002_chrY_T0001409:0;Name=TRAPPC2P3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19013609	19013750	.	+	.	source_transcript=ENST00000443200.1;source_transcript_name=TRAPPC2P3-201;source_gene=ENSG00000224964.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224964.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P3;transcript_id=HG002_chrY_T0001409;gene_id=HG002_chrY_G0000478;Parent=HG002_chrY_T0001409;transcript_name=HG002_chrY_T0001409;gene_name=TRAPPC2P3;ID=exon:HG002_chrY_T0001409:1;Name=TRAPPC2P3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19013751	19014191	.	+	.	source_transcript=ENST00000443200.1;source_transcript_name=TRAPPC2P3-201;source_gene=ENSG00000224964.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224964.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P3;transcript_id=HG002_chrY_T0001409;gene_id=HG002_chrY_G0000478;Parent=HG002_chrY_T0001409;transcript_name=HG002_chrY_T0001409;gene_name=TRAPPC2P3;ID=intron:HG002_chrY_T0001409:1;Name=TRAPPC2P3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19014192	19014277	.	+	.	source_transcript=ENST00000443200.1;source_transcript_name=TRAPPC2P3-201;source_gene=ENSG00000224964.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224964.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P3;transcript_id=HG002_chrY_T0001409;gene_id=HG002_chrY_G0000478;Parent=HG002_chrY_T0001409;transcript_name=HG002_chrY_T0001409;gene_name=TRAPPC2P3;ID=exon:HG002_chrY_T0001409:2;Name=TRAPPC2P3;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19022776	19023945	.	+	.	source_gene_common_name=USP9YP27;source_gene=ENSG00000235521.1;gene_id=HG002_chrY_G0000479;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP27;gene_sources=liftoff;ID=HG002_chrY_G0000479;Name=USP9YP27
HG002_chrY	CAT	transcript	19022776	19023945	1000	+	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=HG002_chrY_T0001410;gene_id=HG002_chrY_G0000479;Parent=HG002_chrY_G0000479;transcript_name=HG002_chrY_T0001410;gene_name=USP9YP27;ID=HG002_chrY_T0001410;Name=USP9YP27
HG002_chrY	CAT	exon	19022776	19022917	.	+	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=HG002_chrY_T0001410;gene_id=HG002_chrY_G0000479;Parent=HG002_chrY_T0001410;transcript_name=HG002_chrY_T0001410;gene_name=USP9YP27;ID=exon:HG002_chrY_T0001410:0;Name=USP9YP27;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19022918	19023069	.	+	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=HG002_chrY_T0001410;gene_id=HG002_chrY_G0000479;Parent=HG002_chrY_T0001410;transcript_name=HG002_chrY_T0001410;gene_name=USP9YP27;ID=intron:HG002_chrY_T0001410:0;Name=USP9YP27;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19023070	19023098	.	+	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=HG002_chrY_T0001410;gene_id=HG002_chrY_G0000479;Parent=HG002_chrY_T0001410;transcript_name=HG002_chrY_T0001410;gene_name=USP9YP27;ID=exon:HG002_chrY_T0001410:1;Name=USP9YP27;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19023099	19023298	.	+	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=HG002_chrY_T0001410;gene_id=HG002_chrY_G0000479;Parent=HG002_chrY_T0001410;transcript_name=HG002_chrY_T0001410;gene_name=USP9YP27;ID=intron:HG002_chrY_T0001410:1;Name=USP9YP27;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19023299	19023469	.	+	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=HG002_chrY_T0001410;gene_id=HG002_chrY_G0000479;Parent=HG002_chrY_T0001410;transcript_name=HG002_chrY_T0001410;gene_name=USP9YP27;ID=exon:HG002_chrY_T0001410:2;Name=USP9YP27;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19023470	19023849	.	+	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=HG002_chrY_T0001410;gene_id=HG002_chrY_G0000479;Parent=HG002_chrY_T0001410;transcript_name=HG002_chrY_T0001410;gene_name=USP9YP27;ID=intron:HG002_chrY_T0001410:2;Name=USP9YP27;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19023850	19023945	.	+	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=HG002_chrY_T0001410;gene_id=HG002_chrY_G0000479;Parent=HG002_chrY_T0001410;transcript_name=HG002_chrY_T0001410;gene_name=USP9YP27;ID=exon:HG002_chrY_T0001410:3;Name=USP9YP27;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19023098	19023257	.	+	.	source_gene_common_name=RNU1-128P;source_gene=ENSG00000252513.1;gene_id=HG002_chrY_G0000480;gene_biotype=snRNA;gene_name=RNU1-128P;gene_sources=liftoff;ID=HG002_chrY_G0000480;Name=RNU1-128P
HG002_chrY	CAT	transcript	19023098	19023257	1000	+	.	source_transcript=ENST00000516704.1;source_transcript_name=RNU1-128P-201;source_gene=ENSG00000252513.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252513.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516704.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-128P;transcript_id=HG002_chrY_T0001411;gene_id=HG002_chrY_G0000480;Parent=HG002_chrY_G0000480;transcript_name=HG002_chrY_T0001411;gene_name=RNU1-128P;ID=HG002_chrY_T0001411;Name=RNU1-128P
HG002_chrY	CAT	exon	19023098	19023257	.	+	.	source_transcript=ENST00000516704.1;source_transcript_name=RNU1-128P-201;source_gene=ENSG00000252513.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252513.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-128P;transcript_id=HG002_chrY_T0001411;gene_id=HG002_chrY_G0000480;Parent=HG002_chrY_T0001411;transcript_name=HG002_chrY_T0001411;gene_name=RNU1-128P;ID=exon:HG002_chrY_T0001411:0;Name=RNU1-128P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19027437	19030041	.	-	.	source_gene_common_name=USP9YP16;source_gene=ENSG00000232744.1;alternative_source_transcripts=ENST00000430287.1;gene_id=HG002_chrY_G0000481;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP16;gene_sources=liftoff;ID=HG002_chrY_G0000481;Name=USP9YP16
HG002_chrY	CAT	transcript	19027437	19030041	1000	-	.	source_transcript=ENST00000430287.1;source_transcript_name=USP9YP16-201;source_gene=ENSG00000232744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430287.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP16;alternative_source_transcripts=ENST00000430287.1;transcript_id=HG002_chrY_T0001412;gene_id=HG002_chrY_G0000481;Parent=HG002_chrY_G0000481;transcript_name=HG002_chrY_T0001412;gene_name=USP9YP16;ID=HG002_chrY_T0001412;Name=USP9YP16
HG002_chrY	CAT	exon	19027437	19027625	.	-	.	source_transcript=ENST00000430287.1;source_transcript_name=USP9YP16-201;source_gene=ENSG00000232744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP16;alternative_source_transcripts=ENST00000430287.1;transcript_id=HG002_chrY_T0001412;gene_id=HG002_chrY_G0000481;Parent=HG002_chrY_T0001412;transcript_name=HG002_chrY_T0001412;gene_name=USP9YP16;ID=exon:HG002_chrY_T0001412:0;Name=USP9YP16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19027626	19029250	.	-	.	source_transcript=ENST00000430287.1;source_transcript_name=USP9YP16-201;source_gene=ENSG00000232744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP16;alternative_source_transcripts=ENST00000430287.1;transcript_id=HG002_chrY_T0001412;gene_id=HG002_chrY_G0000481;Parent=HG002_chrY_T0001412;transcript_name=HG002_chrY_T0001412;gene_name=USP9YP16;ID=intron:HG002_chrY_T0001412:0;Name=USP9YP16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19029251	19029342	.	-	.	source_transcript=ENST00000430287.1;source_transcript_name=USP9YP16-201;source_gene=ENSG00000232744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP16;alternative_source_transcripts=ENST00000430287.1;transcript_id=HG002_chrY_T0001412;gene_id=HG002_chrY_G0000481;Parent=HG002_chrY_T0001412;transcript_name=HG002_chrY_T0001412;gene_name=USP9YP16;ID=exon:HG002_chrY_T0001412:1;Name=USP9YP16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19029343	19029915	.	-	.	source_transcript=ENST00000430287.1;source_transcript_name=USP9YP16-201;source_gene=ENSG00000232744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP16;alternative_source_transcripts=ENST00000430287.1;transcript_id=HG002_chrY_T0001412;gene_id=HG002_chrY_G0000481;Parent=HG002_chrY_T0001412;transcript_name=HG002_chrY_T0001412;gene_name=USP9YP16;ID=intron:HG002_chrY_T0001412:1;Name=USP9YP16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19029916	19030041	.	-	.	source_transcript=ENST00000430287.1;source_transcript_name=USP9YP16-201;source_gene=ENSG00000232744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP16;alternative_source_transcripts=ENST00000430287.1;transcript_id=HG002_chrY_T0001412;gene_id=HG002_chrY_G0000481;Parent=HG002_chrY_T0001412;transcript_name=HG002_chrY_T0001412;gene_name=USP9YP16;ID=exon:HG002_chrY_T0001412:2;Name=USP9YP16;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19034852	19043136	.	+	.	source_gene_common_name=XKRY;source_gene=ENSG00000250868.5;gene_id=HG002_chrY_G0000482;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=XKRY;gene_sources=liftoff;ID=HG002_chrY_G0000482;Name=XKRY
HG002_chrY	CAT	transcript	19034852	19043136	1000	+	.	source_transcript=ENST00000510392.1;source_transcript_name=XKRY-201;source_gene=ENSG00000250868.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250868.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000510392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510392.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;transcript_id=HG002_chrY_T0001413;gene_id=HG002_chrY_G0000482;Parent=HG002_chrY_G0000482;transcript_name=HG002_chrY_T0001413;gene_name=XKRY;ID=HG002_chrY_T0001413;Name=XKRY
HG002_chrY	CAT	exon	19034852	19035186	.	+	.	source_transcript=ENST00000510392.1;source_transcript_name=XKRY-201;source_gene=ENSG00000250868.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250868.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000510392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510392.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;transcript_id=HG002_chrY_T0001413;gene_id=HG002_chrY_G0000482;Parent=HG002_chrY_T0001413;transcript_name=HG002_chrY_T0001413;gene_name=XKRY;ID=exon:HG002_chrY_T0001413:0;Name=XKRY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19035187	19042371	.	+	.	source_transcript=ENST00000510392.1;source_transcript_name=XKRY-201;source_gene=ENSG00000250868.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250868.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000510392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510392.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;transcript_id=HG002_chrY_T0001413;gene_id=HG002_chrY_G0000482;Parent=HG002_chrY_T0001413;transcript_name=HG002_chrY_T0001413;gene_name=XKRY;ID=intron:HG002_chrY_T0001413:0;Name=XKRY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19042372	19043136	.	+	.	source_transcript=ENST00000510392.1;source_transcript_name=XKRY-201;source_gene=ENSG00000250868.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250868.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000510392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510392.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;transcript_id=HG002_chrY_T0001413;gene_id=HG002_chrY_G0000482;Parent=HG002_chrY_T0001413;transcript_name=HG002_chrY_T0001413;gene_name=XKRY;ID=exon:HG002_chrY_T0001413:1;Name=XKRY;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19041692	19043272	.	+	.	source_gene_common_name=XKRY;source_gene=ENSG00000290724.1;gene_id=HG002_chrY_G0000483;gene_biotype=lncRNA;gene_name=XKRY;gene_sources=liftoff;ID=HG002_chrY_G0000483;Name=XKRY
HG002_chrY	CAT	transcript	19041692	19043272	1000	+	.	source_transcript=ENST00000624960.1;source_transcript_name=XKRY-202;source_gene=ENSG00000290724.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290724.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000624960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000624960.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;transcript_id=HG002_chrY_T0001414;gene_id=HG002_chrY_G0000483;Parent=HG002_chrY_G0000483;transcript_name=HG002_chrY_T0001414;gene_name=XKRY;ID=HG002_chrY_T0001414;Name=XKRY
HG002_chrY	CAT	exon	19041692	19043272	.	+	.	source_transcript=ENST00000624960.1;source_transcript_name=XKRY-202;source_gene=ENSG00000290724.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290724.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000624960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000624960.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;transcript_id=HG002_chrY_T0001414;gene_id=HG002_chrY_G0000483;Parent=HG002_chrY_T0001414;transcript_name=HG002_chrY_T0001414;gene_name=XKRY;ID=exon:HG002_chrY_T0001414:0;Name=XKRY;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19054127	19055251	.	+	.	source_gene_common_name=ACTG1P2;source_gene=ENSG00000229129.1;alternative_source_transcripts=ENST00000425411.1;gene_id=HG002_chrY_G0000484;gene_biotype=processed_pseudogene;gene_name=ACTG1P2;gene_sources=liftoff;ID=HG002_chrY_G0000484;Name=ACTG1P2
HG002_chrY	CAT	transcript	19054127	19055251	1000	+	.	source_transcript=ENST00000415776.1;source_transcript_name=ACTG1P2-201;source_gene=ENSG00000229129.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229129.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000415776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415776.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTG1P2;alternative_source_transcripts=ENST00000425411.1;transcript_id=HG002_chrY_T0001415;gene_id=HG002_chrY_G0000484;Parent=HG002_chrY_G0000484;transcript_name=HG002_chrY_T0001415;gene_name=ACTG1P2;ID=HG002_chrY_T0001415;Name=ACTG1P2
HG002_chrY	CAT	exon	19054127	19055251	.	+	.	source_transcript=ENST00000415776.1;source_transcript_name=ACTG1P2-201;source_gene=ENSG00000229129.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229129.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000415776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415776.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTG1P2;alternative_source_transcripts=ENST00000425411.1;transcript_id=HG002_chrY_T0001415;gene_id=HG002_chrY_G0000484;Parent=HG002_chrY_T0001415;transcript_name=HG002_chrY_T0001415;gene_name=ACTG1P2;ID=exon:HG002_chrY_T0001415:0;Name=ACTG1P2;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19082499	19109198	.	+	.	source_gene_common_name=ENSG00000298004;source_gene=ENSG00000298004.1;alternative_source_transcripts=ENST00000848900.1;gene_id=HG002_chrY_G0000485;gene_biotype=lncRNA;gene_name=ENSG00000298004;gene_sources=liftoff;ID=HG002_chrY_G0000485;Name=ENSG00000298004
HG002_chrY	CAT	transcript	19082499	19094680	1000	+	.	source_transcript=ENST00000752440.1;source_transcript_name=ENST00000752440;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752440.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000848900.1;transcript_id=HG002_chrY_T0001416;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_G0000485;transcript_name=HG002_chrY_T0001416;gene_name=ENSG00000298004;ID=HG002_chrY_T0001416;Name=ENSG00000298004
HG002_chrY	CAT	exon	19082499	19082940	.	+	.	source_transcript=ENST00000752440.1;source_transcript_name=ENST00000752440;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000848900.1;transcript_id=HG002_chrY_T0001416;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001416;transcript_name=HG002_chrY_T0001416;gene_name=ENSG00000298004;ID=exon:HG002_chrY_T0001416:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19082941	19093383	.	+	.	source_transcript=ENST00000752440.1;source_transcript_name=ENST00000752440;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000848900.1;transcript_id=HG002_chrY_T0001416;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001416;transcript_name=HG002_chrY_T0001416;gene_name=ENSG00000298004;ID=intron:HG002_chrY_T0001416:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19093384	19094680	.	+	.	source_transcript=ENST00000752440.1;source_transcript_name=ENST00000752440;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000848900.1;transcript_id=HG002_chrY_T0001416;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001416;transcript_name=HG002_chrY_T0001416;gene_name=ENSG00000298004;ID=exon:HG002_chrY_T0001416:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19082537	19098242	1000	+	.	source_transcript=ENST00000752433.1;source_transcript_name=ENST00000752433;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752433.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001417;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_G0000485;transcript_name=HG002_chrY_T0001417;gene_name=ENSG00000298004;ID=HG002_chrY_T0001417;Name=ENSG00000298004
HG002_chrY	CAT	exon	19082537	19082940	.	+	.	source_transcript=ENST00000752433.1;source_transcript_name=ENST00000752433;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001417;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001417;transcript_name=HG002_chrY_T0001417;gene_name=ENSG00000298004;ID=exon:HG002_chrY_T0001417:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19082941	19093383	.	+	.	source_transcript=ENST00000752433.1;source_transcript_name=ENST00000752433;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001417;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001417;transcript_name=HG002_chrY_T0001417;gene_name=ENSG00000298004;ID=intron:HG002_chrY_T0001417:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19093384	19093508	.	+	.	source_transcript=ENST00000752433.1;source_transcript_name=ENST00000752433;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001417;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001417;transcript_name=HG002_chrY_T0001417;gene_name=ENSG00000298004;ID=exon:HG002_chrY_T0001417:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19093509	19097198	.	+	.	source_transcript=ENST00000752433.1;source_transcript_name=ENST00000752433;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001417;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001417;transcript_name=HG002_chrY_T0001417;gene_name=ENSG00000298004;ID=intron:HG002_chrY_T0001417:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19097199	19098242	.	+	.	source_transcript=ENST00000752433.1;source_transcript_name=ENST00000752433;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001417;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001417;transcript_name=HG002_chrY_T0001417;gene_name=ENSG00000298004;ID=exon:HG002_chrY_T0001417:2;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19082587	19085092	1000	+	.	source_transcript=ENST00000752443.1;source_transcript_name=ENST00000752443;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752443.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001418;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_G0000485;transcript_name=HG002_chrY_T0001418;gene_name=ENSG00000298004;ID=HG002_chrY_T0001418;Name=ENSG00000298004
HG002_chrY	CAT	exon	19082587	19082940	.	+	.	source_transcript=ENST00000752443.1;source_transcript_name=ENST00000752443;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001418;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001418;transcript_name=HG002_chrY_T0001418;gene_name=ENSG00000298004;ID=exon:HG002_chrY_T0001418:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19082941	19084528	.	+	.	source_transcript=ENST00000752443.1;source_transcript_name=ENST00000752443;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001418;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001418;transcript_name=HG002_chrY_T0001418;gene_name=ENSG00000298004;ID=intron:HG002_chrY_T0001418:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19084529	19085092	.	+	.	source_transcript=ENST00000752443.1;source_transcript_name=ENST00000752443;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001418;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001418;transcript_name=HG002_chrY_T0001418;gene_name=ENSG00000298004;ID=exon:HG002_chrY_T0001418:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19082587	19098234	1000	+	.	source_transcript=ENST00000752435.1;source_transcript_name=ENST00000752435;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752435.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001419;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_G0000485;transcript_name=HG002_chrY_T0001419;gene_name=ENSG00000298004;ID=HG002_chrY_T0001419;Name=ENSG00000298004
HG002_chrY	CAT	exon	19082587	19082871	.	+	.	source_transcript=ENST00000752435.1;source_transcript_name=ENST00000752435;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001419;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001419;transcript_name=HG002_chrY_T0001419;gene_name=ENSG00000298004;ID=exon:HG002_chrY_T0001419:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19082872	19093383	.	+	.	source_transcript=ENST00000752435.1;source_transcript_name=ENST00000752435;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001419;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001419;transcript_name=HG002_chrY_T0001419;gene_name=ENSG00000298004;ID=intron:HG002_chrY_T0001419:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19093384	19093508	.	+	.	source_transcript=ENST00000752435.1;source_transcript_name=ENST00000752435;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001419;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001419;transcript_name=HG002_chrY_T0001419;gene_name=ENSG00000298004;ID=exon:HG002_chrY_T0001419:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19093509	19097198	.	+	.	source_transcript=ENST00000752435.1;source_transcript_name=ENST00000752435;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001419;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001419;transcript_name=HG002_chrY_T0001419;gene_name=ENSG00000298004;ID=intron:HG002_chrY_T0001419:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19097199	19098234	.	+	.	source_transcript=ENST00000752435.1;source_transcript_name=ENST00000752435;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001419;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001419;transcript_name=HG002_chrY_T0001419;gene_name=ENSG00000298004;ID=exon:HG002_chrY_T0001419:2;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19082587	19098239	1000	+	.	source_transcript=ENST00000752434.1;source_transcript_name=ENST00000752434;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752434.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001420;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_G0000485;transcript_name=HG002_chrY_T0001420;gene_name=ENSG00000298004;ID=HG002_chrY_T0001420;Name=ENSG00000298004
HG002_chrY	CAT	exon	19082587	19082940	.	+	.	source_transcript=ENST00000752434.1;source_transcript_name=ENST00000752434;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001420;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001420;transcript_name=HG002_chrY_T0001420;gene_name=ENSG00000298004;ID=exon:HG002_chrY_T0001420:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19082941	19097198	.	+	.	source_transcript=ENST00000752434.1;source_transcript_name=ENST00000752434;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001420;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001420;transcript_name=HG002_chrY_T0001420;gene_name=ENSG00000298004;ID=intron:HG002_chrY_T0001420:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19097199	19098239	.	+	.	source_transcript=ENST00000752434.1;source_transcript_name=ENST00000752434;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001420;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001420;transcript_name=HG002_chrY_T0001420;gene_name=ENSG00000298004;ID=exon:HG002_chrY_T0001420:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19082593	19098234	1000	+	.	source_transcript=ENST00000752436.1;source_transcript_name=ENST00000752436;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752436.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001421;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_G0000485;transcript_name=HG002_chrY_T0001421;gene_name=ENSG00000298004;ID=HG002_chrY_T0001421;Name=ENSG00000298004
HG002_chrY	CAT	exon	19082593	19082940	.	+	.	source_transcript=ENST00000752436.1;source_transcript_name=ENST00000752436;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001421;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001421;transcript_name=HG002_chrY_T0001421;gene_name=ENSG00000298004;ID=exon:HG002_chrY_T0001421:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19082941	19093387	.	+	.	source_transcript=ENST00000752436.1;source_transcript_name=ENST00000752436;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001421;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001421;transcript_name=HG002_chrY_T0001421;gene_name=ENSG00000298004;ID=intron:HG002_chrY_T0001421:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19093388	19093508	.	+	.	source_transcript=ENST00000752436.1;source_transcript_name=ENST00000752436;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001421;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001421;transcript_name=HG002_chrY_T0001421;gene_name=ENSG00000298004;ID=exon:HG002_chrY_T0001421:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19093509	19097198	.	+	.	source_transcript=ENST00000752436.1;source_transcript_name=ENST00000752436;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001421;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001421;transcript_name=HG002_chrY_T0001421;gene_name=ENSG00000298004;ID=intron:HG002_chrY_T0001421:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19097199	19098234	.	+	.	source_transcript=ENST00000752436.1;source_transcript_name=ENST00000752436;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001421;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001421;transcript_name=HG002_chrY_T0001421;gene_name=ENSG00000298004;ID=exon:HG002_chrY_T0001421:2;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19082597	19097703	1000	+	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001422;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_G0000485;transcript_name=HG002_chrY_T0001422;gene_name=ENSG00000298004;ID=HG002_chrY_T0001422;Name=ENSG00000298004
HG002_chrY	CAT	exon	19082597	19082940	.	+	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001422;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001422;transcript_name=HG002_chrY_T0001422;gene_name=ENSG00000298004;ID=exon:HG002_chrY_T0001422:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19082941	19093383	.	+	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001422;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001422;transcript_name=HG002_chrY_T0001422;gene_name=ENSG00000298004;ID=intron:HG002_chrY_T0001422:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19093384	19093508	.	+	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001422;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001422;transcript_name=HG002_chrY_T0001422;gene_name=ENSG00000298004;ID=exon:HG002_chrY_T0001422:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19093509	19096527	.	+	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001422;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001422;transcript_name=HG002_chrY_T0001422;gene_name=ENSG00000298004;ID=intron:HG002_chrY_T0001422:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19096528	19096579	.	+	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001422;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001422;transcript_name=HG002_chrY_T0001422;gene_name=ENSG00000298004;ID=exon:HG002_chrY_T0001422:2;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19096580	19097198	.	+	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001422;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001422;transcript_name=HG002_chrY_T0001422;gene_name=ENSG00000298004;ID=intron:HG002_chrY_T0001422:2;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19097199	19097703	.	+	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001422;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001422;transcript_name=HG002_chrY_T0001422;gene_name=ENSG00000298004;ID=exon:HG002_chrY_T0001422:3;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19082597	19093547	1000	+	.	source_transcript=ENST00000752441.1;source_transcript_name=ENST00000752441;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752441.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001423;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_G0000485;transcript_name=HG002_chrY_T0001423;gene_name=ENSG00000298004;ID=HG002_chrY_T0001423;Name=ENSG00000298004
HG002_chrY	CAT	exon	19082597	19082940	.	+	.	source_transcript=ENST00000752441.1;source_transcript_name=ENST00000752441;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001423;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001423;transcript_name=HG002_chrY_T0001423;gene_name=ENSG00000298004;ID=exon:HG002_chrY_T0001423:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19082941	19093387	.	+	.	source_transcript=ENST00000752441.1;source_transcript_name=ENST00000752441;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001423;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001423;transcript_name=HG002_chrY_T0001423;gene_name=ENSG00000298004;ID=intron:HG002_chrY_T0001423:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19093388	19093547	.	+	.	source_transcript=ENST00000752441.1;source_transcript_name=ENST00000752441;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001423;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001423;transcript_name=HG002_chrY_T0001423;gene_name=ENSG00000298004;ID=exon:HG002_chrY_T0001423:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19082613	19094831	1000	+	.	source_transcript=ENST00000752439.1;source_transcript_name=ENST00000752439;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752439.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001424;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_G0000485;transcript_name=HG002_chrY_T0001424;gene_name=ENSG00000298004;ID=HG002_chrY_T0001424;Name=ENSG00000298004
HG002_chrY	CAT	exon	19082613	19082871	.	+	.	source_transcript=ENST00000752439.1;source_transcript_name=ENST00000752439;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001424;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001424;transcript_name=HG002_chrY_T0001424;gene_name=ENSG00000298004;ID=exon:HG002_chrY_T0001424:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19082872	19093383	.	+	.	source_transcript=ENST00000752439.1;source_transcript_name=ENST00000752439;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001424;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001424;transcript_name=HG002_chrY_T0001424;gene_name=ENSG00000298004;ID=intron:HG002_chrY_T0001424:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19093384	19094831	.	+	.	source_transcript=ENST00000752439.1;source_transcript_name=ENST00000752439;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001424;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001424;transcript_name=HG002_chrY_T0001424;gene_name=ENSG00000298004;ID=exon:HG002_chrY_T0001424:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19082624	19109198	1000	+	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000848894.1;transcript_id=HG002_chrY_T0001425;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_G0000485;transcript_name=HG002_chrY_T0001425;gene_name=ENSG00000298004;ID=HG002_chrY_T0001425;Name=ENSG00000298004
HG002_chrY	CAT	exon	19082624	19082940	.	+	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000848894.1;transcript_id=HG002_chrY_T0001425;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001425;transcript_name=HG002_chrY_T0001425;gene_name=ENSG00000298004;ID=exon:HG002_chrY_T0001425:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19082941	19106078	.	+	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000848894.1;transcript_id=HG002_chrY_T0001425;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001425;transcript_name=HG002_chrY_T0001425;gene_name=ENSG00000298004;ID=intron:HG002_chrY_T0001425:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19106079	19106297	.	+	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000848894.1;transcript_id=HG002_chrY_T0001425;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001425;transcript_name=HG002_chrY_T0001425;gene_name=ENSG00000298004;ID=exon:HG002_chrY_T0001425:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19106298	19107189	.	+	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000848894.1;transcript_id=HG002_chrY_T0001425;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001425;transcript_name=HG002_chrY_T0001425;gene_name=ENSG00000298004;ID=intron:HG002_chrY_T0001425:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19107190	19107314	.	+	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000848894.1;transcript_id=HG002_chrY_T0001425;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001425;transcript_name=HG002_chrY_T0001425;gene_name=ENSG00000298004;ID=exon:HG002_chrY_T0001425:2;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19107315	19108907	.	+	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000848894.1;transcript_id=HG002_chrY_T0001425;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001425;transcript_name=HG002_chrY_T0001425;gene_name=ENSG00000298004;ID=intron:HG002_chrY_T0001425:2;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19108908	19109198	.	+	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000848894.1;transcript_id=HG002_chrY_T0001425;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001425;transcript_name=HG002_chrY_T0001425;gene_name=ENSG00000298004;ID=exon:HG002_chrY_T0001425:3;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19082624	19097706	1000	+	.	source_transcript=ENST00000752438.1;source_transcript_name=ENST00000752438;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752438.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001426;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_G0000485;transcript_name=HG002_chrY_T0001426;gene_name=ENSG00000298004;ID=HG002_chrY_T0001426;Name=ENSG00000298004
HG002_chrY	CAT	exon	19082624	19082871	.	+	.	source_transcript=ENST00000752438.1;source_transcript_name=ENST00000752438;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001426;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001426;transcript_name=HG002_chrY_T0001426;gene_name=ENSG00000298004;ID=exon:HG002_chrY_T0001426:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19082872	19097198	.	+	.	source_transcript=ENST00000752438.1;source_transcript_name=ENST00000752438;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001426;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001426;transcript_name=HG002_chrY_T0001426;gene_name=ENSG00000298004;ID=intron:HG002_chrY_T0001426:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19097199	19097706	.	+	.	source_transcript=ENST00000752438.1;source_transcript_name=ENST00000752438;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG002_chrY_T0001426;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001426;transcript_name=HG002_chrY_T0001426;gene_name=ENSG00000298004;ID=exon:HG002_chrY_T0001426:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19082634	19088522	1000	+	.	source_transcript=ENST00000752442.1;source_transcript_name=ENST00000752442;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752442.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752442.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000848903.1;transcript_id=HG002_chrY_T0001427;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_G0000485;transcript_name=HG002_chrY_T0001427;gene_name=ENSG00000298004;ID=HG002_chrY_T0001427;Name=ENSG00000298004
HG002_chrY	CAT	exon	19082634	19082940	.	+	.	source_transcript=ENST00000752442.1;source_transcript_name=ENST00000752442;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752442.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752442.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000848903.1;transcript_id=HG002_chrY_T0001427;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001427;transcript_name=HG002_chrY_T0001427;gene_name=ENSG00000298004;ID=exon:HG002_chrY_T0001427:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19082941	19087888	.	+	.	source_transcript=ENST00000752442.1;source_transcript_name=ENST00000752442;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752442.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752442.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000848903.1;transcript_id=HG002_chrY_T0001427;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001427;transcript_name=HG002_chrY_T0001427;gene_name=ENSG00000298004;ID=intron:HG002_chrY_T0001427:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19087889	19088522	.	+	.	source_transcript=ENST00000752442.1;source_transcript_name=ENST00000752442;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752442.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752442.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;alternative_source_transcripts=ENST00000848903.1;transcript_id=HG002_chrY_T0001427;gene_id=HG002_chrY_G0000485;Parent=HG002_chrY_T0001427;transcript_name=HG002_chrY_T0001427;gene_name=ENSG00000298004;ID=exon:HG002_chrY_T0001427:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19085175	19085503	.	-	.	source_gene_common_name=ELOCP26;source_gene=ENSG00000236599.1;alternative_source_transcripts=ENST00000436067.1;gene_id=HG002_chrY_G0000486;gene_biotype=processed_pseudogene;gene_name=ELOCP26;gene_sources=liftoff;ID=HG002_chrY_G0000486;Name=ELOCP26
HG002_chrY	CAT	transcript	19085175	19085503	1000	-	.	source_transcript=ENST00000436067.1;source_transcript_name=ELOCP26-201;source_gene=ENSG00000236599.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236599.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436067.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436067.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP26;alternative_source_transcripts=ENST00000436067.1;transcript_id=HG002_chrY_T0001428;gene_id=HG002_chrY_G0000486;Parent=HG002_chrY_G0000486;transcript_name=HG002_chrY_T0001428;gene_name=ELOCP26;ID=HG002_chrY_T0001428;Name=ELOCP26
HG002_chrY	CAT	exon	19085175	19085503	.	-	.	source_transcript=ENST00000436067.1;source_transcript_name=ELOCP26-201;source_gene=ENSG00000236599.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236599.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436067.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436067.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP26;alternative_source_transcripts=ENST00000436067.1;transcript_id=HG002_chrY_T0001428;gene_id=HG002_chrY_G0000486;Parent=HG002_chrY_T0001428;transcript_name=HG002_chrY_T0001428;gene_name=ELOCP26;ID=exon:HG002_chrY_T0001428:0;Name=ELOCP26;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19089078	19090657	.	-	.	source_gene_common_name=CDY9P;source_gene=ENSG00000232899.1;alternative_source_transcripts=ENST00000451397.1;gene_id=HG002_chrY_G0000487;gene_biotype=unprocessed_pseudogene;gene_name=CDY9P;gene_sources=liftoff;ID=HG002_chrY_G0000487;Name=CDY9P
HG002_chrY	CAT	transcript	19089078	19090657	1000	-	.	source_transcript=ENST00000451397.1;source_transcript_name=CDY9P-201;source_gene=ENSG00000232899.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232899.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000451397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451397.1;transcript_score=199.937;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY9P;alternative_source_transcripts=ENST00000451397.1;transcript_id=HG002_chrY_T0001429;gene_id=HG002_chrY_G0000487;Parent=HG002_chrY_G0000487;transcript_name=HG002_chrY_T0001429;gene_name=CDY9P;ID=HG002_chrY_T0001429;Name=CDY9P
HG002_chrY	CAT	exon	19089078	19090657	.	-	.	source_transcript=ENST00000451397.1;source_transcript_name=CDY9P-201;source_gene=ENSG00000232899.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232899.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000451397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451397.1;transcript_score=199.937;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY9P;alternative_source_transcripts=ENST00000451397.1;transcript_id=HG002_chrY_T0001429;gene_id=HG002_chrY_G0000487;Parent=HG002_chrY_T0001429;transcript_name=HG002_chrY_T0001429;gene_name=CDY9P;ID=exon:HG002_chrY_T0001429:0;Name=CDY9P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19104074	19106291	.	+	.	source_gene_common_name=ENSG00000275578;source_gene=ENSG00000275578.1;gene_id=HG002_chrY_G0000488;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000275578;gene_sources=liftoff;ID=HG002_chrY_G0000488;Name=ENSG00000275578
HG002_chrY	CAT	transcript	19104074	19106291	1000	+	.	source_transcript=ENST00000618226.1;source_transcript_name=ENST00000618226;source_gene=ENSG00000275578.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000275578.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618226.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275578;transcript_id=HG002_chrY_T0001430;gene_id=HG002_chrY_G0000488;Parent=HG002_chrY_G0000488;transcript_name=HG002_chrY_T0001430;gene_name=ENSG00000275578;ID=HG002_chrY_T0001430;Name=ENSG00000275578
HG002_chrY	CAT	exon	19104074	19104260	.	+	.	source_transcript=ENST00000618226.1;source_transcript_name=ENST00000618226;source_gene=ENSG00000275578.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000275578.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618226.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275578;transcript_id=HG002_chrY_T0001430;gene_id=HG002_chrY_G0000488;Parent=HG002_chrY_T0001430;transcript_name=HG002_chrY_T0001430;gene_name=ENSG00000275578;ID=exon:HG002_chrY_T0001430:0;Name=ENSG00000275578;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19104261	19106080	.	+	.	source_transcript=ENST00000618226.1;source_transcript_name=ENST00000618226;source_gene=ENSG00000275578.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000275578.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618226.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275578;transcript_id=HG002_chrY_T0001430;gene_id=HG002_chrY_G0000488;Parent=HG002_chrY_T0001430;transcript_name=HG002_chrY_T0001430;gene_name=ENSG00000275578;ID=intron:HG002_chrY_T0001430:0;Name=ENSG00000275578;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19106081	19106291	.	+	.	source_transcript=ENST00000618226.1;source_transcript_name=ENST00000618226;source_gene=ENSG00000275578.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000275578.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618226.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275578;transcript_id=HG002_chrY_T0001430;gene_id=HG002_chrY_G0000488;Parent=HG002_chrY_T0001430;transcript_name=HG002_chrY_T0001430;gene_name=ENSG00000275578;ID=exon:HG002_chrY_T0001430:1;Name=ENSG00000275578;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19182847	19183736	.	-	.	source_gene_common_name=TAF9P2;source_gene=ENSG00000229302.1;alternative_source_transcripts=ENST00000454958.1;gene_id=HG002_chrY_G0000489;gene_biotype=processed_pseudogene;gene_name=TAF9P2;gene_sources=liftoff;ID=HG002_chrY_G0000489;Name=TAF9P2
HG002_chrY	CAT	transcript	19182847	19183736	1000	-	.	source_transcript=ENST00000454958.1;source_transcript_name=TAF9P2-201;source_gene=ENSG00000229302.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229302.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454958.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P2;alternative_source_transcripts=ENST00000454958.1;transcript_id=HG002_chrY_T0001431;gene_id=HG002_chrY_G0000489;Parent=HG002_chrY_G0000489;transcript_name=HG002_chrY_T0001431;gene_name=TAF9P2;ID=HG002_chrY_T0001431;Name=TAF9P2
HG002_chrY	CAT	exon	19182847	19182888	.	-	.	source_transcript=ENST00000454958.1;source_transcript_name=TAF9P2-201;source_gene=ENSG00000229302.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229302.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P2;alternative_source_transcripts=ENST00000454958.1;transcript_id=HG002_chrY_T0001431;gene_id=HG002_chrY_G0000489;Parent=HG002_chrY_T0001431;transcript_name=HG002_chrY_T0001431;gene_name=TAF9P2;ID=exon:HG002_chrY_T0001431:0;Name=TAF9P2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19182889	19183263	.	-	.	source_transcript=ENST00000454958.1;source_transcript_name=TAF9P2-201;source_gene=ENSG00000229302.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229302.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P2;alternative_source_transcripts=ENST00000454958.1;transcript_id=HG002_chrY_T0001431;gene_id=HG002_chrY_G0000489;Parent=HG002_chrY_T0001431;transcript_name=HG002_chrY_T0001431;gene_name=TAF9P2;ID=intron:HG002_chrY_T0001431:0;Name=TAF9P2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19183264	19183736	.	-	.	source_transcript=ENST00000454958.1;source_transcript_name=TAF9P2-201;source_gene=ENSG00000229302.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229302.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P2;alternative_source_transcripts=ENST00000454958.1;transcript_id=HG002_chrY_T0001431;gene_id=HG002_chrY_G0000489;Parent=HG002_chrY_T0001431;transcript_name=HG002_chrY_T0001431;gene_name=TAF9P2;ID=exon:HG002_chrY_T0001431:1;Name=TAF9P2;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19186417	19190990	.	+	.	source_gene_common_name=CLUHP1;source_gene=ENSG00000238191.3;gene_id=HG002_chrY_G0000490;gene_biotype=unprocessed_pseudogene;gene_name=CLUHP1;gene_sources=liftoff;ID=HG002_chrY_G0000490;Name=CLUHP1
HG002_chrY	CAT	transcript	19186417	19190990	1000	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG002_chrY_T0001432;gene_id=HG002_chrY_G0000490;Parent=HG002_chrY_G0000490;transcript_name=HG002_chrY_T0001432;gene_name=CLUHP1;ID=HG002_chrY_T0001432;Name=CLUHP1
HG002_chrY	CAT	exon	19186417	19186602	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG002_chrY_T0001432;gene_id=HG002_chrY_G0000490;Parent=HG002_chrY_T0001432;transcript_name=HG002_chrY_T0001432;gene_name=CLUHP1;ID=exon:HG002_chrY_T0001432:0;Name=CLUHP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19186603	19187487	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG002_chrY_T0001432;gene_id=HG002_chrY_G0000490;Parent=HG002_chrY_T0001432;transcript_name=HG002_chrY_T0001432;gene_name=CLUHP1;ID=intron:HG002_chrY_T0001432:0;Name=CLUHP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19187488	19187628	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG002_chrY_T0001432;gene_id=HG002_chrY_G0000490;Parent=HG002_chrY_T0001432;transcript_name=HG002_chrY_T0001432;gene_name=CLUHP1;ID=exon:HG002_chrY_T0001432:1;Name=CLUHP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19187629	19187810	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG002_chrY_T0001432;gene_id=HG002_chrY_G0000490;Parent=HG002_chrY_T0001432;transcript_name=HG002_chrY_T0001432;gene_name=CLUHP1;ID=intron:HG002_chrY_T0001432:1;Name=CLUHP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19187811	19187926	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG002_chrY_T0001432;gene_id=HG002_chrY_G0000490;Parent=HG002_chrY_T0001432;transcript_name=HG002_chrY_T0001432;gene_name=CLUHP1;ID=exon:HG002_chrY_T0001432:2;Name=CLUHP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19187927	19188003	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG002_chrY_T0001432;gene_id=HG002_chrY_G0000490;Parent=HG002_chrY_T0001432;transcript_name=HG002_chrY_T0001432;gene_name=CLUHP1;ID=intron:HG002_chrY_T0001432:2;Name=CLUHP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19188004	19188157	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG002_chrY_T0001432;gene_id=HG002_chrY_G0000490;Parent=HG002_chrY_T0001432;transcript_name=HG002_chrY_T0001432;gene_name=CLUHP1;ID=exon:HG002_chrY_T0001432:3;Name=CLUHP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19188158	19188260	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG002_chrY_T0001432;gene_id=HG002_chrY_G0000490;Parent=HG002_chrY_T0001432;transcript_name=HG002_chrY_T0001432;gene_name=CLUHP1;ID=intron:HG002_chrY_T0001432:3;Name=CLUHP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19188261	19188385	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG002_chrY_T0001432;gene_id=HG002_chrY_G0000490;Parent=HG002_chrY_T0001432;transcript_name=HG002_chrY_T0001432;gene_name=CLUHP1;ID=exon:HG002_chrY_T0001432:4;Name=CLUHP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19188386	19189029	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG002_chrY_T0001432;gene_id=HG002_chrY_G0000490;Parent=HG002_chrY_T0001432;transcript_name=HG002_chrY_T0001432;gene_name=CLUHP1;ID=intron:HG002_chrY_T0001432:4;Name=CLUHP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19189030	19189102	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG002_chrY_T0001432;gene_id=HG002_chrY_G0000490;Parent=HG002_chrY_T0001432;transcript_name=HG002_chrY_T0001432;gene_name=CLUHP1;ID=exon:HG002_chrY_T0001432:5;Name=CLUHP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19189103	19189352	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG002_chrY_T0001432;gene_id=HG002_chrY_G0000490;Parent=HG002_chrY_T0001432;transcript_name=HG002_chrY_T0001432;gene_name=CLUHP1;ID=intron:HG002_chrY_T0001432:5;Name=CLUHP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19189353	19189444	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG002_chrY_T0001432;gene_id=HG002_chrY_G0000490;Parent=HG002_chrY_T0001432;transcript_name=HG002_chrY_T0001432;gene_name=CLUHP1;ID=exon:HG002_chrY_T0001432:6;Name=CLUHP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19189445	19190133	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG002_chrY_T0001432;gene_id=HG002_chrY_G0000490;Parent=HG002_chrY_T0001432;transcript_name=HG002_chrY_T0001432;gene_name=CLUHP1;ID=intron:HG002_chrY_T0001432:6;Name=CLUHP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19190134	19190232	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG002_chrY_T0001432;gene_id=HG002_chrY_G0000490;Parent=HG002_chrY_T0001432;transcript_name=HG002_chrY_T0001432;gene_name=CLUHP1;ID=exon:HG002_chrY_T0001432:7;Name=CLUHP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19190233	19190709	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG002_chrY_T0001432;gene_id=HG002_chrY_G0000490;Parent=HG002_chrY_T0001432;transcript_name=HG002_chrY_T0001432;gene_name=CLUHP1;ID=intron:HG002_chrY_T0001432:7;Name=CLUHP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19190710	19190789	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG002_chrY_T0001432;gene_id=HG002_chrY_G0000490;Parent=HG002_chrY_T0001432;transcript_name=HG002_chrY_T0001432;gene_name=CLUHP1;ID=exon:HG002_chrY_T0001432:8;Name=CLUHP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19190790	19190866	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG002_chrY_T0001432;gene_id=HG002_chrY_G0000490;Parent=HG002_chrY_T0001432;transcript_name=HG002_chrY_T0001432;gene_name=CLUHP1;ID=intron:HG002_chrY_T0001432:8;Name=CLUHP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19190867	19190990	.	+	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=HG002_chrY_T0001432;gene_id=HG002_chrY_G0000490;Parent=HG002_chrY_T0001432;transcript_name=HG002_chrY_T0001432;gene_name=CLUHP1;ID=exon:HG002_chrY_T0001432:9;Name=CLUHP1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19232298	19258968	.	+	.	source_gene_common_name=FAM224A;source_gene=ENSG00000233522.2;alternative_source_transcripts=ENST00000776205.1;gene_id=HG002_chrY_G0000491;gene_biotype=lncRNA;gene_name=FAM224A;gene_sources=liftoff;ID=HG002_chrY_G0000491;Name=FAM224A
HG002_chrY	CAT	transcript	19232298	19237132	1000	+	.	source_transcript=ENST00000776205.1;source_transcript_name=FAM224A-211;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776205.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776205.1;transcript_id=HG002_chrY_T0001433;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_G0000491;transcript_name=HG002_chrY_T0001433;gene_name=FAM224A;ID=HG002_chrY_T0001433;Name=FAM224A
HG002_chrY	CAT	exon	19232298	19232592	.	+	.	source_transcript=ENST00000776205.1;source_transcript_name=FAM224A-211;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776205.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776205.1;transcript_id=HG002_chrY_T0001433;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001433;transcript_name=HG002_chrY_T0001433;gene_name=FAM224A;ID=exon:HG002_chrY_T0001433:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232593	19232782	.	+	.	source_transcript=ENST00000776205.1;source_transcript_name=FAM224A-211;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776205.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776205.1;transcript_id=HG002_chrY_T0001433;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001433;transcript_name=HG002_chrY_T0001433;gene_name=FAM224A;ID=intron:HG002_chrY_T0001433:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19232783	19232942	.	+	.	source_transcript=ENST00000776205.1;source_transcript_name=FAM224A-211;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776205.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776205.1;transcript_id=HG002_chrY_T0001433;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001433;transcript_name=HG002_chrY_T0001433;gene_name=FAM224A;ID=exon:HG002_chrY_T0001433:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232943	19235437	.	+	.	source_transcript=ENST00000776205.1;source_transcript_name=FAM224A-211;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776205.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776205.1;transcript_id=HG002_chrY_T0001433;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001433;transcript_name=HG002_chrY_T0001433;gene_name=FAM224A;ID=intron:HG002_chrY_T0001433:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19235438	19235555	.	+	.	source_transcript=ENST00000776205.1;source_transcript_name=FAM224A-211;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776205.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776205.1;transcript_id=HG002_chrY_T0001433;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001433;transcript_name=HG002_chrY_T0001433;gene_name=FAM224A;ID=exon:HG002_chrY_T0001433:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19235556	19236890	.	+	.	source_transcript=ENST00000776205.1;source_transcript_name=FAM224A-211;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776205.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776205.1;transcript_id=HG002_chrY_T0001433;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001433;transcript_name=HG002_chrY_T0001433;gene_name=FAM224A;ID=intron:HG002_chrY_T0001433:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19236891	19237132	.	+	.	source_transcript=ENST00000776205.1;source_transcript_name=FAM224A-211;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776205.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776205.1;transcript_id=HG002_chrY_T0001433;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001433;transcript_name=HG002_chrY_T0001433;gene_name=FAM224A;ID=exon:HG002_chrY_T0001433:3;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19232381	19237102	1000	+	.	source_transcript=ENST00000776207.1;source_transcript_name=FAM224A-213;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776207.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776207.1;transcript_id=HG002_chrY_T0001434;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_G0000491;transcript_name=HG002_chrY_T0001434;gene_name=FAM224A;ID=HG002_chrY_T0001434;Name=FAM224A
HG002_chrY	CAT	exon	19232381	19232592	.	+	.	source_transcript=ENST00000776207.1;source_transcript_name=FAM224A-213;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776207.1;transcript_id=HG002_chrY_T0001434;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001434;transcript_name=HG002_chrY_T0001434;gene_name=FAM224A;ID=exon:HG002_chrY_T0001434:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232593	19232708	.	+	.	source_transcript=ENST00000776207.1;source_transcript_name=FAM224A-213;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776207.1;transcript_id=HG002_chrY_T0001434;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001434;transcript_name=HG002_chrY_T0001434;gene_name=FAM224A;ID=intron:HG002_chrY_T0001434:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19232709	19232942	.	+	.	source_transcript=ENST00000776207.1;source_transcript_name=FAM224A-213;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776207.1;transcript_id=HG002_chrY_T0001434;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001434;transcript_name=HG002_chrY_T0001434;gene_name=FAM224A;ID=exon:HG002_chrY_T0001434:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232943	19235437	.	+	.	source_transcript=ENST00000776207.1;source_transcript_name=FAM224A-213;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776207.1;transcript_id=HG002_chrY_T0001434;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001434;transcript_name=HG002_chrY_T0001434;gene_name=FAM224A;ID=intron:HG002_chrY_T0001434:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19235438	19235555	.	+	.	source_transcript=ENST00000776207.1;source_transcript_name=FAM224A-213;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776207.1;transcript_id=HG002_chrY_T0001434;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001434;transcript_name=HG002_chrY_T0001434;gene_name=FAM224A;ID=exon:HG002_chrY_T0001434:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19235556	19236890	.	+	.	source_transcript=ENST00000776207.1;source_transcript_name=FAM224A-213;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776207.1;transcript_id=HG002_chrY_T0001434;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001434;transcript_name=HG002_chrY_T0001434;gene_name=FAM224A;ID=intron:HG002_chrY_T0001434:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19236891	19237102	.	+	.	source_transcript=ENST00000776207.1;source_transcript_name=FAM224A-213;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776207.1;transcript_id=HG002_chrY_T0001434;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001434;transcript_name=HG002_chrY_T0001434;gene_name=FAM224A;ID=exon:HG002_chrY_T0001434:3;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19232393	19258979	1000	+	.	source_transcript=ENST00000776196.1;source_transcript_name=FAM224A-202;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776196.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776196.1;transcript_id=HG002_chrY_T0001435;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_G0000491;transcript_name=HG002_chrY_T0001435;gene_name=FAM224A;ID=HG002_chrY_T0001435;Name=FAM224A
HG002_chrY	CAT	exon	19232393	19232942	.	+	.	source_transcript=ENST00000776196.1;source_transcript_name=FAM224A-202;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776196.1;transcript_id=HG002_chrY_T0001435;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001435;transcript_name=HG002_chrY_T0001435;gene_name=FAM224A;ID=exon:HG002_chrY_T0001435:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232943	19235437	.	+	.	source_transcript=ENST00000776196.1;source_transcript_name=FAM224A-202;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776196.1;transcript_id=HG002_chrY_T0001435;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001435;transcript_name=HG002_chrY_T0001435;gene_name=FAM224A;ID=intron:HG002_chrY_T0001435:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19235438	19235555	.	+	.	source_transcript=ENST00000776196.1;source_transcript_name=FAM224A-202;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776196.1;transcript_id=HG002_chrY_T0001435;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001435;transcript_name=HG002_chrY_T0001435;gene_name=FAM224A;ID=exon:HG002_chrY_T0001435:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19235556	19258135	.	+	.	source_transcript=ENST00000776196.1;source_transcript_name=FAM224A-202;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776196.1;transcript_id=HG002_chrY_T0001435;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001435;transcript_name=HG002_chrY_T0001435;gene_name=FAM224A;ID=intron:HG002_chrY_T0001435:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19258136	19258220	.	+	.	source_transcript=ENST00000776196.1;source_transcript_name=FAM224A-202;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776196.1;transcript_id=HG002_chrY_T0001435;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001435;transcript_name=HG002_chrY_T0001435;gene_name=FAM224A;ID=exon:HG002_chrY_T0001435:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19258221	19258307	.	+	.	source_transcript=ENST00000776196.1;source_transcript_name=FAM224A-202;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776196.1;transcript_id=HG002_chrY_T0001435;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001435;transcript_name=HG002_chrY_T0001435;gene_name=FAM224A;ID=intron:HG002_chrY_T0001435:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19258308	19258979	.	+	.	source_transcript=ENST00000776196.1;source_transcript_name=FAM224A-202;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776196.1;transcript_id=HG002_chrY_T0001435;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001435;transcript_name=HG002_chrY_T0001435;gene_name=FAM224A;ID=exon:HG002_chrY_T0001435:3;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19232393	19237131	1000	+	.	source_transcript=ENST00000776206.1;source_transcript_name=FAM224A-212;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776206.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776206.1;transcript_id=HG002_chrY_T0001436;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_G0000491;transcript_name=HG002_chrY_T0001436;gene_name=FAM224A;ID=HG002_chrY_T0001436;Name=FAM224A
HG002_chrY	CAT	exon	19232393	19232942	.	+	.	source_transcript=ENST00000776206.1;source_transcript_name=FAM224A-212;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776206.1;transcript_id=HG002_chrY_T0001436;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001436;transcript_name=HG002_chrY_T0001436;gene_name=FAM224A;ID=exon:HG002_chrY_T0001436:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232943	19235437	.	+	.	source_transcript=ENST00000776206.1;source_transcript_name=FAM224A-212;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776206.1;transcript_id=HG002_chrY_T0001436;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001436;transcript_name=HG002_chrY_T0001436;gene_name=FAM224A;ID=intron:HG002_chrY_T0001436:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19235438	19235555	.	+	.	source_transcript=ENST00000776206.1;source_transcript_name=FAM224A-212;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776206.1;transcript_id=HG002_chrY_T0001436;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001436;transcript_name=HG002_chrY_T0001436;gene_name=FAM224A;ID=exon:HG002_chrY_T0001436:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19235556	19236890	.	+	.	source_transcript=ENST00000776206.1;source_transcript_name=FAM224A-212;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776206.1;transcript_id=HG002_chrY_T0001436;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001436;transcript_name=HG002_chrY_T0001436;gene_name=FAM224A;ID=intron:HG002_chrY_T0001436:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19236891	19237131	.	+	.	source_transcript=ENST00000776206.1;source_transcript_name=FAM224A-212;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776206.1;transcript_id=HG002_chrY_T0001436;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001436;transcript_name=HG002_chrY_T0001436;gene_name=FAM224A;ID=exon:HG002_chrY_T0001436:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19232400	19237115	1000	+	.	source_transcript=ENST00000776208.1;source_transcript_name=FAM224A-214;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776208.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776208.1;transcript_id=HG002_chrY_T0001437;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_G0000491;transcript_name=HG002_chrY_T0001437;gene_name=FAM224A;ID=HG002_chrY_T0001437;Name=FAM224A
HG002_chrY	CAT	exon	19232400	19232592	.	+	.	source_transcript=ENST00000776208.1;source_transcript_name=FAM224A-214;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776208.1;transcript_id=HG002_chrY_T0001437;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001437;transcript_name=HG002_chrY_T0001437;gene_name=FAM224A;ID=exon:HG002_chrY_T0001437:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232593	19232782	.	+	.	source_transcript=ENST00000776208.1;source_transcript_name=FAM224A-214;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776208.1;transcript_id=HG002_chrY_T0001437;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001437;transcript_name=HG002_chrY_T0001437;gene_name=FAM224A;ID=intron:HG002_chrY_T0001437:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19232783	19232942	.	+	.	source_transcript=ENST00000776208.1;source_transcript_name=FAM224A-214;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776208.1;transcript_id=HG002_chrY_T0001437;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001437;transcript_name=HG002_chrY_T0001437;gene_name=FAM224A;ID=exon:HG002_chrY_T0001437:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232943	19235465	.	+	.	source_transcript=ENST00000776208.1;source_transcript_name=FAM224A-214;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776208.1;transcript_id=HG002_chrY_T0001437;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001437;transcript_name=HG002_chrY_T0001437;gene_name=FAM224A;ID=intron:HG002_chrY_T0001437:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19235466	19235555	.	+	.	source_transcript=ENST00000776208.1;source_transcript_name=FAM224A-214;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776208.1;transcript_id=HG002_chrY_T0001437;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001437;transcript_name=HG002_chrY_T0001437;gene_name=FAM224A;ID=exon:HG002_chrY_T0001437:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19235556	19236890	.	+	.	source_transcript=ENST00000776208.1;source_transcript_name=FAM224A-214;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776208.1;transcript_id=HG002_chrY_T0001437;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001437;transcript_name=HG002_chrY_T0001437;gene_name=FAM224A;ID=intron:HG002_chrY_T0001437:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19236891	19237115	.	+	.	source_transcript=ENST00000776208.1;source_transcript_name=FAM224A-214;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776208.1;transcript_id=HG002_chrY_T0001437;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001437;transcript_name=HG002_chrY_T0001437;gene_name=FAM224A;ID=exon:HG002_chrY_T0001437:3;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19232402	19237076	1000	+	.	source_transcript=ENST00000776212.1;source_transcript_name=FAM224A-218;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776212.1;transcript_score=299.938;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776212.1;transcript_id=HG002_chrY_T0001438;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_G0000491;transcript_name=HG002_chrY_T0001438;gene_name=FAM224A;ID=HG002_chrY_T0001438;Name=FAM224A
HG002_chrY	CAT	exon	19232402	19232592	.	+	.	source_transcript=ENST00000776212.1;source_transcript_name=FAM224A-218;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776212.1;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776212.1;transcript_id=HG002_chrY_T0001438;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001438;transcript_name=HG002_chrY_T0001438;gene_name=FAM224A;ID=exon:HG002_chrY_T0001438:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232593	19232782	.	+	.	source_transcript=ENST00000776212.1;source_transcript_name=FAM224A-218;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776212.1;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776212.1;transcript_id=HG002_chrY_T0001438;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001438;transcript_name=HG002_chrY_T0001438;gene_name=FAM224A;ID=intron:HG002_chrY_T0001438:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19232783	19232942	.	+	.	source_transcript=ENST00000776212.1;source_transcript_name=FAM224A-218;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776212.1;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776212.1;transcript_id=HG002_chrY_T0001438;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001438;transcript_name=HG002_chrY_T0001438;gene_name=FAM224A;ID=exon:HG002_chrY_T0001438:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232943	19234485	.	+	.	source_transcript=ENST00000776212.1;source_transcript_name=FAM224A-218;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776212.1;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776212.1;transcript_id=HG002_chrY_T0001438;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001438;transcript_name=HG002_chrY_T0001438;gene_name=FAM224A;ID=intron:HG002_chrY_T0001438:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19234486	19235555	.	+	.	source_transcript=ENST00000776212.1;source_transcript_name=FAM224A-218;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776212.1;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776212.1;transcript_id=HG002_chrY_T0001438;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001438;transcript_name=HG002_chrY_T0001438;gene_name=FAM224A;ID=exon:HG002_chrY_T0001438:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19235556	19236890	.	+	.	source_transcript=ENST00000776212.1;source_transcript_name=FAM224A-218;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776212.1;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776212.1;transcript_id=HG002_chrY_T0001438;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001438;transcript_name=HG002_chrY_T0001438;gene_name=FAM224A;ID=intron:HG002_chrY_T0001438:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19236891	19237076	.	+	.	source_transcript=ENST00000776212.1;source_transcript_name=FAM224A-218;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776212.1;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776212.1;transcript_id=HG002_chrY_T0001438;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001438;transcript_name=HG002_chrY_T0001438;gene_name=FAM224A;ID=exon:HG002_chrY_T0001438:3;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19232404	19258968	1000	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=HG002_chrY_T0001439;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_G0000491;transcript_name=HG002_chrY_T0001439;gene_name=FAM224A;ID=HG002_chrY_T0001439;Name=FAM224A
HG002_chrY	CAT	exon	19232404	19232592	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=HG002_chrY_T0001439;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001439;transcript_name=HG002_chrY_T0001439;gene_name=FAM224A;ID=exon:HG002_chrY_T0001439:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232593	19232782	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=HG002_chrY_T0001439;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001439;transcript_name=HG002_chrY_T0001439;gene_name=FAM224A;ID=intron:HG002_chrY_T0001439:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19232783	19232942	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=HG002_chrY_T0001439;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001439;transcript_name=HG002_chrY_T0001439;gene_name=FAM224A;ID=exon:HG002_chrY_T0001439:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232943	19235437	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=HG002_chrY_T0001439;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001439;transcript_name=HG002_chrY_T0001439;gene_name=FAM224A;ID=intron:HG002_chrY_T0001439:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19235438	19235555	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=HG002_chrY_T0001439;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001439;transcript_name=HG002_chrY_T0001439;gene_name=FAM224A;ID=exon:HG002_chrY_T0001439:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19235556	19258135	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=HG002_chrY_T0001439;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001439;transcript_name=HG002_chrY_T0001439;gene_name=FAM224A;ID=intron:HG002_chrY_T0001439:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19258136	19258220	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=HG002_chrY_T0001439;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001439;transcript_name=HG002_chrY_T0001439;gene_name=FAM224A;ID=exon:HG002_chrY_T0001439:3;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19258221	19258307	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=HG002_chrY_T0001439;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001439;transcript_name=HG002_chrY_T0001439;gene_name=FAM224A;ID=intron:HG002_chrY_T0001439:3;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19258308	19258434	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=HG002_chrY_T0001439;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001439;transcript_name=HG002_chrY_T0001439;gene_name=FAM224A;ID=exon:HG002_chrY_T0001439:4;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19258435	19258908	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=HG002_chrY_T0001439;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001439;transcript_name=HG002_chrY_T0001439;gene_name=FAM224A;ID=intron:HG002_chrY_T0001439:4;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19258909	19258968	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1;transcript_id=HG002_chrY_T0001439;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001439;transcript_name=HG002_chrY_T0001439;gene_name=FAM224A;ID=exon:HG002_chrY_T0001439:5;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19232404	19258694	1000	+	.	source_transcript=ENST00000776203.1;source_transcript_name=FAM224A-209;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776203.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776203.1;transcript_id=HG002_chrY_T0001440;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_G0000491;transcript_name=HG002_chrY_T0001440;gene_name=FAM224A;ID=HG002_chrY_T0001440;Name=FAM224A
HG002_chrY	CAT	exon	19232404	19232592	.	+	.	source_transcript=ENST00000776203.1;source_transcript_name=FAM224A-209;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776203.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776203.1;transcript_id=HG002_chrY_T0001440;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001440;transcript_name=HG002_chrY_T0001440;gene_name=FAM224A;ID=exon:HG002_chrY_T0001440:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232593	19258135	.	+	.	source_transcript=ENST00000776203.1;source_transcript_name=FAM224A-209;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776203.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776203.1;transcript_id=HG002_chrY_T0001440;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001440;transcript_name=HG002_chrY_T0001440;gene_name=FAM224A;ID=intron:HG002_chrY_T0001440:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19258136	19258220	.	+	.	source_transcript=ENST00000776203.1;source_transcript_name=FAM224A-209;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776203.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776203.1;transcript_id=HG002_chrY_T0001440;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001440;transcript_name=HG002_chrY_T0001440;gene_name=FAM224A;ID=exon:HG002_chrY_T0001440:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19258221	19258307	.	+	.	source_transcript=ENST00000776203.1;source_transcript_name=FAM224A-209;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776203.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776203.1;transcript_id=HG002_chrY_T0001440;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001440;transcript_name=HG002_chrY_T0001440;gene_name=FAM224A;ID=intron:HG002_chrY_T0001440:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19258308	19258694	.	+	.	source_transcript=ENST00000776203.1;source_transcript_name=FAM224A-209;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776203.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776203.1;transcript_id=HG002_chrY_T0001440;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001440;transcript_name=HG002_chrY_T0001440;gene_name=FAM224A;ID=exon:HG002_chrY_T0001440:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19232404	19237101	1000	+	.	source_transcript=ENST00000776209.1;source_transcript_name=FAM224A-215;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776209.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776209.1;transcript_id=HG002_chrY_T0001441;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_G0000491;transcript_name=HG002_chrY_T0001441;gene_name=FAM224A;ID=HG002_chrY_T0001441;Name=FAM224A
HG002_chrY	CAT	exon	19232404	19232592	.	+	.	source_transcript=ENST00000776209.1;source_transcript_name=FAM224A-215;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776209.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776209.1;transcript_id=HG002_chrY_T0001441;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001441;transcript_name=HG002_chrY_T0001441;gene_name=FAM224A;ID=exon:HG002_chrY_T0001441:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232593	19232806	.	+	.	source_transcript=ENST00000776209.1;source_transcript_name=FAM224A-215;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776209.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776209.1;transcript_id=HG002_chrY_T0001441;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001441;transcript_name=HG002_chrY_T0001441;gene_name=FAM224A;ID=intron:HG002_chrY_T0001441:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19232807	19232942	.	+	.	source_transcript=ENST00000776209.1;source_transcript_name=FAM224A-215;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776209.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776209.1;transcript_id=HG002_chrY_T0001441;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001441;transcript_name=HG002_chrY_T0001441;gene_name=FAM224A;ID=exon:HG002_chrY_T0001441:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232943	19235437	.	+	.	source_transcript=ENST00000776209.1;source_transcript_name=FAM224A-215;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776209.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776209.1;transcript_id=HG002_chrY_T0001441;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001441;transcript_name=HG002_chrY_T0001441;gene_name=FAM224A;ID=intron:HG002_chrY_T0001441:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19235438	19235555	.	+	.	source_transcript=ENST00000776209.1;source_transcript_name=FAM224A-215;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776209.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776209.1;transcript_id=HG002_chrY_T0001441;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001441;transcript_name=HG002_chrY_T0001441;gene_name=FAM224A;ID=exon:HG002_chrY_T0001441:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19235556	19236890	.	+	.	source_transcript=ENST00000776209.1;source_transcript_name=FAM224A-215;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776209.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776209.1;transcript_id=HG002_chrY_T0001441;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001441;transcript_name=HG002_chrY_T0001441;gene_name=FAM224A;ID=intron:HG002_chrY_T0001441:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19236891	19237101	.	+	.	source_transcript=ENST00000776209.1;source_transcript_name=FAM224A-215;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776209.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776209.1;transcript_id=HG002_chrY_T0001441;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001441;transcript_name=HG002_chrY_T0001441;gene_name=FAM224A;ID=exon:HG002_chrY_T0001441:3;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19232408	19258966	1000	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1;transcript_id=HG002_chrY_T0001442;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_G0000491;transcript_name=HG002_chrY_T0001442;gene_name=FAM224A;ID=HG002_chrY_T0001442;Name=FAM224A
HG002_chrY	CAT	exon	19232408	19232592	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1;transcript_id=HG002_chrY_T0001442;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001442;transcript_name=HG002_chrY_T0001442;gene_name=FAM224A;ID=exon:HG002_chrY_T0001442:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232593	19232782	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1;transcript_id=HG002_chrY_T0001442;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001442;transcript_name=HG002_chrY_T0001442;gene_name=FAM224A;ID=intron:HG002_chrY_T0001442:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19232783	19232942	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1;transcript_id=HG002_chrY_T0001442;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001442;transcript_name=HG002_chrY_T0001442;gene_name=FAM224A;ID=exon:HG002_chrY_T0001442:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232943	19235437	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1;transcript_id=HG002_chrY_T0001442;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001442;transcript_name=HG002_chrY_T0001442;gene_name=FAM224A;ID=intron:HG002_chrY_T0001442:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19235438	19235555	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1;transcript_id=HG002_chrY_T0001442;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001442;transcript_name=HG002_chrY_T0001442;gene_name=FAM224A;ID=exon:HG002_chrY_T0001442:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19235556	19258135	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1;transcript_id=HG002_chrY_T0001442;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001442;transcript_name=HG002_chrY_T0001442;gene_name=FAM224A;ID=intron:HG002_chrY_T0001442:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19258136	19258220	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1;transcript_id=HG002_chrY_T0001442;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001442;transcript_name=HG002_chrY_T0001442;gene_name=FAM224A;ID=exon:HG002_chrY_T0001442:3;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19258221	19258307	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1;transcript_id=HG002_chrY_T0001442;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001442;transcript_name=HG002_chrY_T0001442;gene_name=FAM224A;ID=intron:HG002_chrY_T0001442:3;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19258308	19258966	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1;transcript_id=HG002_chrY_T0001442;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001442;transcript_name=HG002_chrY_T0001442;gene_name=FAM224A;ID=exon:HG002_chrY_T0001442:4;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19232408	19258964	1000	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=HG002_chrY_T0001443;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_G0000491;transcript_name=HG002_chrY_T0001443;gene_name=FAM224A;ID=HG002_chrY_T0001443;Name=FAM224A
HG002_chrY	CAT	exon	19232408	19232592	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=HG002_chrY_T0001443;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001443;transcript_name=HG002_chrY_T0001443;gene_name=FAM224A;ID=exon:HG002_chrY_T0001443:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232593	19232782	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=HG002_chrY_T0001443;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001443;transcript_name=HG002_chrY_T0001443;gene_name=FAM224A;ID=intron:HG002_chrY_T0001443:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19232783	19232942	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=HG002_chrY_T0001443;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001443;transcript_name=HG002_chrY_T0001443;gene_name=FAM224A;ID=exon:HG002_chrY_T0001443:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232943	19235465	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=HG002_chrY_T0001443;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001443;transcript_name=HG002_chrY_T0001443;gene_name=FAM224A;ID=intron:HG002_chrY_T0001443:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19235466	19235555	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=HG002_chrY_T0001443;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001443;transcript_name=HG002_chrY_T0001443;gene_name=FAM224A;ID=exon:HG002_chrY_T0001443:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19235556	19258135	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=HG002_chrY_T0001443;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001443;transcript_name=HG002_chrY_T0001443;gene_name=FAM224A;ID=intron:HG002_chrY_T0001443:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19258136	19258220	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=HG002_chrY_T0001443;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001443;transcript_name=HG002_chrY_T0001443;gene_name=FAM224A;ID=exon:HG002_chrY_T0001443:3;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19258221	19258307	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=HG002_chrY_T0001443;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001443;transcript_name=HG002_chrY_T0001443;gene_name=FAM224A;ID=intron:HG002_chrY_T0001443:3;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19258308	19258468	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=HG002_chrY_T0001443;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001443;transcript_name=HG002_chrY_T0001443;gene_name=FAM224A;ID=exon:HG002_chrY_T0001443:4;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19258469	19258908	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=HG002_chrY_T0001443;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001443;transcript_name=HG002_chrY_T0001443;gene_name=FAM224A;ID=intron:HG002_chrY_T0001443:4;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19258909	19258964	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1;transcript_id=HG002_chrY_T0001443;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001443;transcript_name=HG002_chrY_T0001443;gene_name=FAM224A;ID=exon:HG002_chrY_T0001443:5;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19232413	19258966	1000	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=HG002_chrY_T0001444;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_G0000491;transcript_name=HG002_chrY_T0001444;gene_name=FAM224A;ID=HG002_chrY_T0001444;Name=FAM224A
HG002_chrY	CAT	exon	19232413	19232592	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=HG002_chrY_T0001444;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001444;transcript_name=HG002_chrY_T0001444;gene_name=FAM224A;ID=exon:HG002_chrY_T0001444:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232593	19232782	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=HG002_chrY_T0001444;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001444;transcript_name=HG002_chrY_T0001444;gene_name=FAM224A;ID=intron:HG002_chrY_T0001444:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19232783	19232942	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=HG002_chrY_T0001444;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001444;transcript_name=HG002_chrY_T0001444;gene_name=FAM224A;ID=exon:HG002_chrY_T0001444:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232943	19235437	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=HG002_chrY_T0001444;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001444;transcript_name=HG002_chrY_T0001444;gene_name=FAM224A;ID=intron:HG002_chrY_T0001444:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19235438	19235555	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=HG002_chrY_T0001444;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001444;transcript_name=HG002_chrY_T0001444;gene_name=FAM224A;ID=exon:HG002_chrY_T0001444:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19235556	19236890	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=HG002_chrY_T0001444;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001444;transcript_name=HG002_chrY_T0001444;gene_name=FAM224A;ID=intron:HG002_chrY_T0001444:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19236891	19237020	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=HG002_chrY_T0001444;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001444;transcript_name=HG002_chrY_T0001444;gene_name=FAM224A;ID=exon:HG002_chrY_T0001444:3;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19237021	19258135	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=HG002_chrY_T0001444;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001444;transcript_name=HG002_chrY_T0001444;gene_name=FAM224A;ID=intron:HG002_chrY_T0001444:3;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19258136	19258220	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=HG002_chrY_T0001444;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001444;transcript_name=HG002_chrY_T0001444;gene_name=FAM224A;ID=exon:HG002_chrY_T0001444:4;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19258221	19258307	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=HG002_chrY_T0001444;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001444;transcript_name=HG002_chrY_T0001444;gene_name=FAM224A;ID=intron:HG002_chrY_T0001444:4;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19258308	19258966	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1;transcript_id=HG002_chrY_T0001444;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001444;transcript_name=HG002_chrY_T0001444;gene_name=FAM224A;ID=exon:HG002_chrY_T0001444:5;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19232447	19258964	1000	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1;transcript_id=HG002_chrY_T0001445;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_G0000491;transcript_name=HG002_chrY_T0001445;gene_name=FAM224A;ID=HG002_chrY_T0001445;Name=FAM224A
HG002_chrY	CAT	exon	19232447	19232592	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1;transcript_id=HG002_chrY_T0001445;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001445;transcript_name=HG002_chrY_T0001445;gene_name=FAM224A;ID=exon:HG002_chrY_T0001445:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232593	19232708	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1;transcript_id=HG002_chrY_T0001445;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001445;transcript_name=HG002_chrY_T0001445;gene_name=FAM224A;ID=intron:HG002_chrY_T0001445:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19232709	19232942	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1;transcript_id=HG002_chrY_T0001445;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001445;transcript_name=HG002_chrY_T0001445;gene_name=FAM224A;ID=exon:HG002_chrY_T0001445:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232943	19235437	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1;transcript_id=HG002_chrY_T0001445;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001445;transcript_name=HG002_chrY_T0001445;gene_name=FAM224A;ID=intron:HG002_chrY_T0001445:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19235438	19235555	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1;transcript_id=HG002_chrY_T0001445;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001445;transcript_name=HG002_chrY_T0001445;gene_name=FAM224A;ID=exon:HG002_chrY_T0001445:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19235556	19258135	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1;transcript_id=HG002_chrY_T0001445;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001445;transcript_name=HG002_chrY_T0001445;gene_name=FAM224A;ID=intron:HG002_chrY_T0001445:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19258136	19258220	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1;transcript_id=HG002_chrY_T0001445;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001445;transcript_name=HG002_chrY_T0001445;gene_name=FAM224A;ID=exon:HG002_chrY_T0001445:3;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19258221	19258307	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1;transcript_id=HG002_chrY_T0001445;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001445;transcript_name=HG002_chrY_T0001445;gene_name=FAM224A;ID=intron:HG002_chrY_T0001445:3;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19258308	19258964	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1;transcript_id=HG002_chrY_T0001445;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001445;transcript_name=HG002_chrY_T0001445;gene_name=FAM224A;ID=exon:HG002_chrY_T0001445:4;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19232447	19237101	1000	+	.	source_transcript=ENST00000776210.1;source_transcript_name=FAM224A-216;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776210.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776210.1;transcript_id=HG002_chrY_T0001446;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_G0000491;transcript_name=HG002_chrY_T0001446;gene_name=FAM224A;ID=HG002_chrY_T0001446;Name=FAM224A
HG002_chrY	CAT	exon	19232447	19232592	.	+	.	source_transcript=ENST00000776210.1;source_transcript_name=FAM224A-216;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776210.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776210.1;transcript_id=HG002_chrY_T0001446;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001446;transcript_name=HG002_chrY_T0001446;gene_name=FAM224A;ID=exon:HG002_chrY_T0001446:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232593	19235437	.	+	.	source_transcript=ENST00000776210.1;source_transcript_name=FAM224A-216;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776210.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776210.1;transcript_id=HG002_chrY_T0001446;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001446;transcript_name=HG002_chrY_T0001446;gene_name=FAM224A;ID=intron:HG002_chrY_T0001446:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19235438	19235555	.	+	.	source_transcript=ENST00000776210.1;source_transcript_name=FAM224A-216;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776210.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776210.1;transcript_id=HG002_chrY_T0001446;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001446;transcript_name=HG002_chrY_T0001446;gene_name=FAM224A;ID=exon:HG002_chrY_T0001446:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19235556	19236890	.	+	.	source_transcript=ENST00000776210.1;source_transcript_name=FAM224A-216;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776210.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776210.1;transcript_id=HG002_chrY_T0001446;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001446;transcript_name=HG002_chrY_T0001446;gene_name=FAM224A;ID=intron:HG002_chrY_T0001446:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19236891	19237101	.	+	.	source_transcript=ENST00000776210.1;source_transcript_name=FAM224A-216;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776210.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776210.1;transcript_id=HG002_chrY_T0001446;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001446;transcript_name=HG002_chrY_T0001446;gene_name=FAM224A;ID=exon:HG002_chrY_T0001446:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19232447	19236815	1000	+	.	source_transcript=ENST00000776216.1;source_transcript_name=FAM224A-222;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776216.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776216.1;transcript_id=HG002_chrY_T0001447;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_G0000491;transcript_name=HG002_chrY_T0001447;gene_name=FAM224A;ID=HG002_chrY_T0001447;Name=FAM224A
HG002_chrY	CAT	exon	19232447	19232592	.	+	.	source_transcript=ENST00000776216.1;source_transcript_name=FAM224A-222;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776216.1;transcript_id=HG002_chrY_T0001447;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001447;transcript_name=HG002_chrY_T0001447;gene_name=FAM224A;ID=exon:HG002_chrY_T0001447:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232593	19232782	.	+	.	source_transcript=ENST00000776216.1;source_transcript_name=FAM224A-222;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776216.1;transcript_id=HG002_chrY_T0001447;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001447;transcript_name=HG002_chrY_T0001447;gene_name=FAM224A;ID=intron:HG002_chrY_T0001447:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19232783	19232942	.	+	.	source_transcript=ENST00000776216.1;source_transcript_name=FAM224A-222;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776216.1;transcript_id=HG002_chrY_T0001447;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001447;transcript_name=HG002_chrY_T0001447;gene_name=FAM224A;ID=exon:HG002_chrY_T0001447:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232943	19235594	.	+	.	source_transcript=ENST00000776216.1;source_transcript_name=FAM224A-222;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776216.1;transcript_id=HG002_chrY_T0001447;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001447;transcript_name=HG002_chrY_T0001447;gene_name=FAM224A;ID=intron:HG002_chrY_T0001447:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19235595	19236815	.	+	.	source_transcript=ENST00000776216.1;source_transcript_name=FAM224A-222;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776216.1;transcript_id=HG002_chrY_T0001447;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001447;transcript_name=HG002_chrY_T0001447;gene_name=FAM224A;ID=exon:HG002_chrY_T0001447:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19232452	19237101	1000	+	.	source_transcript=ENST00000776211.1;source_transcript_name=FAM224A-217;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776211.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776211.1;transcript_id=HG002_chrY_T0001448;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_G0000491;transcript_name=HG002_chrY_T0001448;gene_name=FAM224A;ID=HG002_chrY_T0001448;Name=FAM224A
HG002_chrY	CAT	exon	19232452	19232592	.	+	.	source_transcript=ENST00000776211.1;source_transcript_name=FAM224A-217;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776211.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776211.1;transcript_id=HG002_chrY_T0001448;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001448;transcript_name=HG002_chrY_T0001448;gene_name=FAM224A;ID=exon:HG002_chrY_T0001448:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232593	19232820	.	+	.	source_transcript=ENST00000776211.1;source_transcript_name=FAM224A-217;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776211.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776211.1;transcript_id=HG002_chrY_T0001448;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001448;transcript_name=HG002_chrY_T0001448;gene_name=FAM224A;ID=intron:HG002_chrY_T0001448:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19232821	19232942	.	+	.	source_transcript=ENST00000776211.1;source_transcript_name=FAM224A-217;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776211.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776211.1;transcript_id=HG002_chrY_T0001448;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001448;transcript_name=HG002_chrY_T0001448;gene_name=FAM224A;ID=exon:HG002_chrY_T0001448:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232943	19235437	.	+	.	source_transcript=ENST00000776211.1;source_transcript_name=FAM224A-217;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776211.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776211.1;transcript_id=HG002_chrY_T0001448;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001448;transcript_name=HG002_chrY_T0001448;gene_name=FAM224A;ID=intron:HG002_chrY_T0001448:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19235438	19235555	.	+	.	source_transcript=ENST00000776211.1;source_transcript_name=FAM224A-217;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776211.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776211.1;transcript_id=HG002_chrY_T0001448;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001448;transcript_name=HG002_chrY_T0001448;gene_name=FAM224A;ID=exon:HG002_chrY_T0001448:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19235556	19236890	.	+	.	source_transcript=ENST00000776211.1;source_transcript_name=FAM224A-217;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776211.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776211.1;transcript_id=HG002_chrY_T0001448;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001448;transcript_name=HG002_chrY_T0001448;gene_name=FAM224A;ID=intron:HG002_chrY_T0001448:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19236891	19237101	.	+	.	source_transcript=ENST00000776211.1;source_transcript_name=FAM224A-217;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776211.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776211.1;transcript_id=HG002_chrY_T0001448;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001448;transcript_name=HG002_chrY_T0001448;gene_name=FAM224A;ID=exon:HG002_chrY_T0001448:3;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19232453	19258964	1000	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=HG002_chrY_T0001449;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_G0000491;transcript_name=HG002_chrY_T0001449;gene_name=FAM224A;ID=HG002_chrY_T0001449;Name=FAM224A
HG002_chrY	CAT	exon	19232453	19232592	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=HG002_chrY_T0001449;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001449;transcript_name=HG002_chrY_T0001449;gene_name=FAM224A;ID=exon:HG002_chrY_T0001449:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232593	19232782	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=HG002_chrY_T0001449;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001449;transcript_name=HG002_chrY_T0001449;gene_name=FAM224A;ID=intron:HG002_chrY_T0001449:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19232783	19232942	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=HG002_chrY_T0001449;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001449;transcript_name=HG002_chrY_T0001449;gene_name=FAM224A;ID=exon:HG002_chrY_T0001449:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232943	19235437	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=HG002_chrY_T0001449;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001449;transcript_name=HG002_chrY_T0001449;gene_name=FAM224A;ID=intron:HG002_chrY_T0001449:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19235438	19235555	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=HG002_chrY_T0001449;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001449;transcript_name=HG002_chrY_T0001449;gene_name=FAM224A;ID=exon:HG002_chrY_T0001449:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19235556	19236890	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=HG002_chrY_T0001449;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001449;transcript_name=HG002_chrY_T0001449;gene_name=FAM224A;ID=intron:HG002_chrY_T0001449:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19236891	19237020	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=HG002_chrY_T0001449;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001449;transcript_name=HG002_chrY_T0001449;gene_name=FAM224A;ID=exon:HG002_chrY_T0001449:3;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19237021	19258135	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=HG002_chrY_T0001449;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001449;transcript_name=HG002_chrY_T0001449;gene_name=FAM224A;ID=intron:HG002_chrY_T0001449:3;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19258136	19258220	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=HG002_chrY_T0001449;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001449;transcript_name=HG002_chrY_T0001449;gene_name=FAM224A;ID=exon:HG002_chrY_T0001449:4;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19258221	19258307	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=HG002_chrY_T0001449;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001449;transcript_name=HG002_chrY_T0001449;gene_name=FAM224A;ID=intron:HG002_chrY_T0001449:4;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19258308	19258434	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=HG002_chrY_T0001449;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001449;transcript_name=HG002_chrY_T0001449;gene_name=FAM224A;ID=exon:HG002_chrY_T0001449:5;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19258435	19258908	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=HG002_chrY_T0001449;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001449;transcript_name=HG002_chrY_T0001449;gene_name=FAM224A;ID=intron:HG002_chrY_T0001449:5;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19258909	19258964	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1;transcript_id=HG002_chrY_T0001449;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001449;transcript_name=HG002_chrY_T0001449;gene_name=FAM224A;ID=exon:HG002_chrY_T0001449:6;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19232453	19237074	1000	+	.	source_transcript=ENST00000776213.1;source_transcript_name=FAM224A-219;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776213.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776213.1;transcript_id=HG002_chrY_T0001450;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_G0000491;transcript_name=HG002_chrY_T0001450;gene_name=FAM224A;ID=HG002_chrY_T0001450;Name=FAM224A
HG002_chrY	CAT	exon	19232453	19232592	.	+	.	source_transcript=ENST00000776213.1;source_transcript_name=FAM224A-219;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776213.1;transcript_id=HG002_chrY_T0001450;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001450;transcript_name=HG002_chrY_T0001450;gene_name=FAM224A;ID=exon:HG002_chrY_T0001450:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232593	19232782	.	+	.	source_transcript=ENST00000776213.1;source_transcript_name=FAM224A-219;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776213.1;transcript_id=HG002_chrY_T0001450;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001450;transcript_name=HG002_chrY_T0001450;gene_name=FAM224A;ID=intron:HG002_chrY_T0001450:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19232783	19232942	.	+	.	source_transcript=ENST00000776213.1;source_transcript_name=FAM224A-219;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776213.1;transcript_id=HG002_chrY_T0001450;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001450;transcript_name=HG002_chrY_T0001450;gene_name=FAM224A;ID=exon:HG002_chrY_T0001450:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232943	19236890	.	+	.	source_transcript=ENST00000776213.1;source_transcript_name=FAM224A-219;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776213.1;transcript_id=HG002_chrY_T0001450;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001450;transcript_name=HG002_chrY_T0001450;gene_name=FAM224A;ID=intron:HG002_chrY_T0001450:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19236891	19237074	.	+	.	source_transcript=ENST00000776213.1;source_transcript_name=FAM224A-219;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776213.1;transcript_id=HG002_chrY_T0001450;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001450;transcript_name=HG002_chrY_T0001450;gene_name=FAM224A;ID=exon:HG002_chrY_T0001450:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19232454	19258691	1000	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1;transcript_id=HG002_chrY_T0001451;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_G0000491;transcript_name=HG002_chrY_T0001451;gene_name=FAM224A;ID=HG002_chrY_T0001451;Name=FAM224A
HG002_chrY	CAT	exon	19232454	19232942	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1;transcript_id=HG002_chrY_T0001451;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001451;transcript_name=HG002_chrY_T0001451;gene_name=FAM224A;ID=exon:HG002_chrY_T0001451:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232943	19235437	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1;transcript_id=HG002_chrY_T0001451;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001451;transcript_name=HG002_chrY_T0001451;gene_name=FAM224A;ID=intron:HG002_chrY_T0001451:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19235438	19235555	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1;transcript_id=HG002_chrY_T0001451;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001451;transcript_name=HG002_chrY_T0001451;gene_name=FAM224A;ID=exon:HG002_chrY_T0001451:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19235556	19236890	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1;transcript_id=HG002_chrY_T0001451;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001451;transcript_name=HG002_chrY_T0001451;gene_name=FAM224A;ID=intron:HG002_chrY_T0001451:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19236891	19237020	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1;transcript_id=HG002_chrY_T0001451;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001451;transcript_name=HG002_chrY_T0001451;gene_name=FAM224A;ID=exon:HG002_chrY_T0001451:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19237021	19258135	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1;transcript_id=HG002_chrY_T0001451;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001451;transcript_name=HG002_chrY_T0001451;gene_name=FAM224A;ID=intron:HG002_chrY_T0001451:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19258136	19258220	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1;transcript_id=HG002_chrY_T0001451;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001451;transcript_name=HG002_chrY_T0001451;gene_name=FAM224A;ID=exon:HG002_chrY_T0001451:3;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19258221	19258307	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1;transcript_id=HG002_chrY_T0001451;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001451;transcript_name=HG002_chrY_T0001451;gene_name=FAM224A;ID=intron:HG002_chrY_T0001451:3;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19258308	19258691	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1;transcript_id=HG002_chrY_T0001451;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001451;transcript_name=HG002_chrY_T0001451;gene_name=FAM224A;ID=exon:HG002_chrY_T0001451:4;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19232490	19237101	1000	+	.	source_transcript=ENST00000776214.1;source_transcript_name=FAM224A-220;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776214.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776214.1;transcript_id=HG002_chrY_T0001452;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_G0000491;transcript_name=HG002_chrY_T0001452;gene_name=FAM224A;ID=HG002_chrY_T0001452;Name=FAM224A
HG002_chrY	CAT	exon	19232490	19232592	.	+	.	source_transcript=ENST00000776214.1;source_transcript_name=FAM224A-220;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776214.1;transcript_id=HG002_chrY_T0001452;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001452;transcript_name=HG002_chrY_T0001452;gene_name=FAM224A;ID=exon:HG002_chrY_T0001452:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232593	19232708	.	+	.	source_transcript=ENST00000776214.1;source_transcript_name=FAM224A-220;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776214.1;transcript_id=HG002_chrY_T0001452;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001452;transcript_name=HG002_chrY_T0001452;gene_name=FAM224A;ID=intron:HG002_chrY_T0001452:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19232709	19232942	.	+	.	source_transcript=ENST00000776214.1;source_transcript_name=FAM224A-220;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776214.1;transcript_id=HG002_chrY_T0001452;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001452;transcript_name=HG002_chrY_T0001452;gene_name=FAM224A;ID=exon:HG002_chrY_T0001452:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232943	19235465	.	+	.	source_transcript=ENST00000776214.1;source_transcript_name=FAM224A-220;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776214.1;transcript_id=HG002_chrY_T0001452;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001452;transcript_name=HG002_chrY_T0001452;gene_name=FAM224A;ID=intron:HG002_chrY_T0001452:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19235466	19235555	.	+	.	source_transcript=ENST00000776214.1;source_transcript_name=FAM224A-220;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776214.1;transcript_id=HG002_chrY_T0001452;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001452;transcript_name=HG002_chrY_T0001452;gene_name=FAM224A;ID=exon:HG002_chrY_T0001452:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19235556	19236890	.	+	.	source_transcript=ENST00000776214.1;source_transcript_name=FAM224A-220;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776214.1;transcript_id=HG002_chrY_T0001452;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001452;transcript_name=HG002_chrY_T0001452;gene_name=FAM224A;ID=intron:HG002_chrY_T0001452:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19236891	19237101	.	+	.	source_transcript=ENST00000776214.1;source_transcript_name=FAM224A-220;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776214.1;transcript_id=HG002_chrY_T0001452;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001452;transcript_name=HG002_chrY_T0001452;gene_name=FAM224A;ID=exon:HG002_chrY_T0001452:3;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19232504	19259462	1000	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1;transcript_id=HG002_chrY_T0001453;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_G0000491;transcript_name=HG002_chrY_T0001453;gene_name=FAM224A;ID=HG002_chrY_T0001453;Name=FAM224A
HG002_chrY	CAT	exon	19232504	19232942	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1;transcript_id=HG002_chrY_T0001453;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001453;transcript_name=HG002_chrY_T0001453;gene_name=FAM224A;ID=exon:HG002_chrY_T0001453:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232943	19235437	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1;transcript_id=HG002_chrY_T0001453;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001453;transcript_name=HG002_chrY_T0001453;gene_name=FAM224A;ID=intron:HG002_chrY_T0001453:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19235438	19235555	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1;transcript_id=HG002_chrY_T0001453;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001453;transcript_name=HG002_chrY_T0001453;gene_name=FAM224A;ID=exon:HG002_chrY_T0001453:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19235556	19256251	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1;transcript_id=HG002_chrY_T0001453;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001453;transcript_name=HG002_chrY_T0001453;gene_name=FAM224A;ID=intron:HG002_chrY_T0001453:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19256252	19256486	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1;transcript_id=HG002_chrY_T0001453;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001453;transcript_name=HG002_chrY_T0001453;gene_name=FAM224A;ID=exon:HG002_chrY_T0001453:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19256487	19258135	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1;transcript_id=HG002_chrY_T0001453;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001453;transcript_name=HG002_chrY_T0001453;gene_name=FAM224A;ID=intron:HG002_chrY_T0001453:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19258136	19258220	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1;transcript_id=HG002_chrY_T0001453;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001453;transcript_name=HG002_chrY_T0001453;gene_name=FAM224A;ID=exon:HG002_chrY_T0001453:3;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19258221	19258307	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1;transcript_id=HG002_chrY_T0001453;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001453;transcript_name=HG002_chrY_T0001453;gene_name=FAM224A;ID=intron:HG002_chrY_T0001453:3;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19258308	19259462	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1;transcript_id=HG002_chrY_T0001453;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001453;transcript_name=HG002_chrY_T0001453;gene_name=FAM224A;ID=exon:HG002_chrY_T0001453:4;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19232687	19237093	1000	+	.	source_transcript=ENST00000776215.1;source_transcript_name=FAM224A-221;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776215.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776215.1;transcript_id=HG002_chrY_T0001454;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_G0000491;transcript_name=HG002_chrY_T0001454;gene_name=FAM224A;ID=HG002_chrY_T0001454;Name=FAM224A
HG002_chrY	CAT	exon	19232687	19232942	.	+	.	source_transcript=ENST00000776215.1;source_transcript_name=FAM224A-221;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776215.1;transcript_id=HG002_chrY_T0001454;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001454;transcript_name=HG002_chrY_T0001454;gene_name=FAM224A;ID=exon:HG002_chrY_T0001454:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19232943	19235465	.	+	.	source_transcript=ENST00000776215.1;source_transcript_name=FAM224A-221;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776215.1;transcript_id=HG002_chrY_T0001454;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001454;transcript_name=HG002_chrY_T0001454;gene_name=FAM224A;ID=intron:HG002_chrY_T0001454:0;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19235466	19235555	.	+	.	source_transcript=ENST00000776215.1;source_transcript_name=FAM224A-221;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776215.1;transcript_id=HG002_chrY_T0001454;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001454;transcript_name=HG002_chrY_T0001454;gene_name=FAM224A;ID=exon:HG002_chrY_T0001454:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19235556	19236890	.	+	.	source_transcript=ENST00000776215.1;source_transcript_name=FAM224A-221;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776215.1;transcript_id=HG002_chrY_T0001454;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001454;transcript_name=HG002_chrY_T0001454;gene_name=FAM224A;ID=intron:HG002_chrY_T0001454:1;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19236891	19237093	.	+	.	source_transcript=ENST00000776215.1;source_transcript_name=FAM224A-221;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776215.1;transcript_id=HG002_chrY_T0001454;gene_id=HG002_chrY_G0000491;Parent=HG002_chrY_T0001454;transcript_name=HG002_chrY_T0001454;gene_name=FAM224A;ID=exon:HG002_chrY_T0001454:2;Name=FAM224A;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19243211	19243300	.	+	.	source_gene_common_name=ENSG00000278391;source_gene=ENSG00000278391.1;alternative_source_transcripts=ENST00000614353.1;gene_id=HG002_chrY_G0000492;gene_biotype=misc_RNA;gene_name=ENSG00000278391;gene_sources=liftoff;ID=HG002_chrY_G0000492;Name=ENSG00000278391
HG002_chrY	CAT	transcript	19243211	19243300	1000	+	.	source_transcript=ENST00000614353.1;source_transcript_name=ENST00000614353;source_gene=ENSG00000278391.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000278391.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000614353.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614353.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278391;alternative_source_transcripts=ENST00000614353.1;transcript_id=HG002_chrY_T0001455;gene_id=HG002_chrY_G0000492;Parent=HG002_chrY_G0000492;transcript_name=HG002_chrY_T0001455;gene_name=ENSG00000278391;ID=HG002_chrY_T0001455;Name=ENSG00000278391
HG002_chrY	CAT	exon	19243211	19243300	.	+	.	source_transcript=ENST00000614353.1;source_transcript_name=ENST00000614353;source_gene=ENSG00000278391.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000278391.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000614353.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614353.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278391;alternative_source_transcripts=ENST00000614353.1;transcript_id=HG002_chrY_T0001455;gene_id=HG002_chrY_G0000492;Parent=HG002_chrY_T0001455;transcript_name=HG002_chrY_T0001455;gene_name=ENSG00000278391;ID=exon:HG002_chrY_T0001455:0;Name=ENSG00000278391;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19252374	19252489	.	-	.	source_gene_common_name=RNA5SP521;source_gene=ENSG00000252012.1;alternative_source_transcripts=ENST00000516144.1;gene_id=HG002_chrY_G0000493;gene_biotype=rRNA_pseudogene;gene_name=RNA5SP521;gene_sources=liftoff;ID=HG002_chrY_G0000493;Name=RNA5SP521
HG002_chrY	CAT	transcript	19252374	19252489	1000	-	.	source_transcript=ENST00000516203.1;source_transcript_name=RNA5SP521-201;source_gene=ENSG00000252012.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252012.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516203.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP521;alternative_source_transcripts=ENST00000516144.1;transcript_id=HG002_chrY_T0001456;gene_id=HG002_chrY_G0000493;Parent=HG002_chrY_G0000493;transcript_name=HG002_chrY_T0001456;gene_name=RNA5SP521;ID=HG002_chrY_T0001456;Name=RNA5SP521
HG002_chrY	CAT	exon	19252374	19252489	.	-	.	source_transcript=ENST00000516203.1;source_transcript_name=RNA5SP521-201;source_gene=ENSG00000252012.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252012.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP521;alternative_source_transcripts=ENST00000516144.1;transcript_id=HG002_chrY_T0001456;gene_id=HG002_chrY_G0000493;Parent=HG002_chrY_T0001456;transcript_name=HG002_chrY_T0001456;gene_name=RNA5SP521;ID=exon:HG002_chrY_T0001456:0;Name=RNA5SP521;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19254287	19254399	.	-	.	source_gene_common_name=RNA5SP520;source_gene=ENSG00000252315.1;alternative_source_transcripts=ENST00000516858.1;gene_id=HG002_chrY_G0000494;gene_biotype=rRNA_pseudogene;gene_name=RNA5SP520;gene_sources=liftoff;ID=HG002_chrY_G0000494;Name=RNA5SP520
HG002_chrY	CAT	transcript	19254287	19254399	1000	-	.	source_transcript=ENST00000516506.1;source_transcript_name=RNA5SP520-201;source_gene=ENSG00000252315.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252315.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516506.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516506.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP520;alternative_source_transcripts=ENST00000516858.1;transcript_id=HG002_chrY_T0001457;gene_id=HG002_chrY_G0000494;Parent=HG002_chrY_G0000494;transcript_name=HG002_chrY_T0001457;gene_name=RNA5SP520;ID=HG002_chrY_T0001457;Name=RNA5SP520
HG002_chrY	CAT	exon	19254287	19254399	.	-	.	source_transcript=ENST00000516506.1;source_transcript_name=RNA5SP520-201;source_gene=ENSG00000252315.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252315.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516506.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516506.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP520;alternative_source_transcripts=ENST00000516858.1;transcript_id=HG002_chrY_T0001457;gene_id=HG002_chrY_G0000494;Parent=HG002_chrY_T0001457;transcript_name=HG002_chrY_T0001457;gene_name=RNA5SP520;ID=exon:HG002_chrY_T0001457:0;Name=RNA5SP520;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19293226	19295403	.	+	.	source_gene_common_name=TUBB1P1;source_gene=ENSG00000249726.1;gene_id=HG002_chrY_G0000495;gene_biotype=unprocessed_pseudogene;gene_name=TUBB1P1;gene_sources=liftoff,transMap;ID=HG002_chrY_G0000495;Name=TUBB1P1
HG002_chrY	CAT	transcript	19293226	19295403	1000	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=transMap;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG002_chrY_T0001458;gene_id=HG002_chrY_G0000495;Parent=HG002_chrY_G0000495;transcript_name=HG002_chrY_T0001458;gene_name=TUBB1P1;ID=HG002_chrY_T0001458;Name=TUBB1P1
HG002_chrY	CAT	exon	19293226	19293282	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=transMap;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG002_chrY_T0001458;gene_id=HG002_chrY_G0000495;Parent=HG002_chrY_T0001458;transcript_name=HG002_chrY_T0001458;gene_name=TUBB1P1;ID=exon:HG002_chrY_T0001458:0;Name=TUBB1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19293283	19293587	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=transMap;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG002_chrY_T0001458;gene_id=HG002_chrY_G0000495;Parent=HG002_chrY_T0001458;transcript_name=HG002_chrY_T0001458;gene_name=TUBB1P1;ID=intron:HG002_chrY_T0001458:0;Name=TUBB1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19293588	19293886	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=transMap;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG002_chrY_T0001458;gene_id=HG002_chrY_G0000495;Parent=HG002_chrY_T0001458;transcript_name=HG002_chrY_T0001458;gene_name=TUBB1P1;ID=exon:HG002_chrY_T0001458:1;Name=TUBB1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19293887	19294379	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=transMap;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG002_chrY_T0001458;gene_id=HG002_chrY_G0000495;Parent=HG002_chrY_T0001458;transcript_name=HG002_chrY_T0001458;gene_name=TUBB1P1;ID=intron:HG002_chrY_T0001458:1;Name=TUBB1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19294380	19295403	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=transMap;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG002_chrY_T0001458;gene_id=HG002_chrY_G0000495;Parent=HG002_chrY_T0001458;transcript_name=HG002_chrY_T0001458;gene_name=TUBB1P1;ID=exon:HG002_chrY_T0001458:2;Name=TUBB1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19293226	19295403	1000	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG002_chrY_T0001459;gene_id=HG002_chrY_G0000495;Parent=HG002_chrY_G0000495;transcript_name=HG002_chrY_T0001459;gene_name=TUBB1P1;ID=HG002_chrY_T0001459;Name=TUBB1P1
HG002_chrY	CAT	exon	19293226	19293282	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG002_chrY_T0001459;gene_id=HG002_chrY_G0000495;Parent=HG002_chrY_T0001459;transcript_name=HG002_chrY_T0001459;gene_name=TUBB1P1;ID=exon:HG002_chrY_T0001459:0;Name=TUBB1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19293283	19293587	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG002_chrY_T0001459;gene_id=HG002_chrY_G0000495;Parent=HG002_chrY_T0001459;transcript_name=HG002_chrY_T0001459;gene_name=TUBB1P1;ID=intron:HG002_chrY_T0001459:0;Name=TUBB1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19293588	19293696	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG002_chrY_T0001459;gene_id=HG002_chrY_G0000495;Parent=HG002_chrY_T0001459;transcript_name=HG002_chrY_T0001459;gene_name=TUBB1P1;ID=exon:HG002_chrY_T0001459:1;Name=TUBB1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19293697	19293776	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG002_chrY_T0001459;gene_id=HG002_chrY_G0000495;Parent=HG002_chrY_T0001459;transcript_name=HG002_chrY_T0001459;gene_name=TUBB1P1;ID=intron:HG002_chrY_T0001459:1;Name=TUBB1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19293777	19293886	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG002_chrY_T0001459;gene_id=HG002_chrY_G0000495;Parent=HG002_chrY_T0001459;transcript_name=HG002_chrY_T0001459;gene_name=TUBB1P1;ID=exon:HG002_chrY_T0001459:2;Name=TUBB1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19293887	19294379	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG002_chrY_T0001459;gene_id=HG002_chrY_G0000495;Parent=HG002_chrY_T0001459;transcript_name=HG002_chrY_T0001459;gene_name=TUBB1P1;ID=intron:HG002_chrY_T0001459:2;Name=TUBB1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19294380	19295403	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG002_chrY_T0001459;gene_id=HG002_chrY_G0000495;Parent=HG002_chrY_T0001459;transcript_name=HG002_chrY_T0001459;gene_name=TUBB1P1;ID=exon:HG002_chrY_T0001459:3;Name=TUBB1P1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19295095	19311304	.	-	.	source_gene_common_name=FAM41AY2;source_gene=ENSG00000290726.3;gene_id=HG002_chrY_G0000496;gene_biotype=lncRNA;gene_name=FAM41AY2;gene_sources=liftoff;ID=HG002_chrY_G0000496;Name=FAM41AY2
HG002_chrY	CAT	transcript	19295095	19297376	1000	-	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001460;gene_id=HG002_chrY_G0000496;Parent=HG002_chrY_G0000496;transcript_name=HG002_chrY_T0001460;gene_name=FAM41AY2;ID=HG002_chrY_T0001460;Name=FAM41AY2
HG002_chrY	CAT	exon	19295095	19296248	.	-	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001460;gene_id=HG002_chrY_G0000496;Parent=HG002_chrY_T0001460;transcript_name=HG002_chrY_T0001460;gene_name=FAM41AY2;ID=exon:HG002_chrY_T0001460:0;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19296249	19296330	.	-	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001460;gene_id=HG002_chrY_G0000496;Parent=HG002_chrY_T0001460;transcript_name=HG002_chrY_T0001460;gene_name=FAM41AY2;ID=intron:HG002_chrY_T0001460:0;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19296331	19296552	.	-	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001460;gene_id=HG002_chrY_G0000496;Parent=HG002_chrY_T0001460;transcript_name=HG002_chrY_T0001460;gene_name=FAM41AY2;ID=exon:HG002_chrY_T0001460:1;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19296553	19297245	.	-	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001460;gene_id=HG002_chrY_G0000496;Parent=HG002_chrY_T0001460;transcript_name=HG002_chrY_T0001460;gene_name=FAM41AY2;ID=intron:HG002_chrY_T0001460:1;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19297246	19297376	.	-	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001460;gene_id=HG002_chrY_G0000496;Parent=HG002_chrY_T0001460;transcript_name=HG002_chrY_T0001460;gene_name=FAM41AY2;ID=exon:HG002_chrY_T0001460:2;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19297246	19311304	1000	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001462;gene_id=HG002_chrY_G0000496;Parent=HG002_chrY_G0000496;transcript_name=HG002_chrY_T0001462;gene_name=FAM41AY2;ID=HG002_chrY_T0001462;Name=FAM41AY2
HG002_chrY	CAT	exon	19297246	19297455	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001462;gene_id=HG002_chrY_G0000496;Parent=HG002_chrY_T0001462;transcript_name=HG002_chrY_T0001462;gene_name=FAM41AY2;ID=exon:HG002_chrY_T0001462:0;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19297456	19297729	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001462;gene_id=HG002_chrY_G0000496;Parent=HG002_chrY_T0001462;transcript_name=HG002_chrY_T0001462;gene_name=FAM41AY2;ID=intron:HG002_chrY_T0001462:0;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19297730	19297823	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001462;gene_id=HG002_chrY_G0000496;Parent=HG002_chrY_T0001462;transcript_name=HG002_chrY_T0001462;gene_name=FAM41AY2;ID=exon:HG002_chrY_T0001462:1;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19297824	19297932	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001462;gene_id=HG002_chrY_G0000496;Parent=HG002_chrY_T0001462;transcript_name=HG002_chrY_T0001462;gene_name=FAM41AY2;ID=intron:HG002_chrY_T0001462:1;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19297933	19298103	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001462;gene_id=HG002_chrY_G0000496;Parent=HG002_chrY_T0001462;transcript_name=HG002_chrY_T0001462;gene_name=FAM41AY2;ID=exon:HG002_chrY_T0001462:2;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19298104	19298696	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001462;gene_id=HG002_chrY_G0000496;Parent=HG002_chrY_T0001462;transcript_name=HG002_chrY_T0001462;gene_name=FAM41AY2;ID=intron:HG002_chrY_T0001462:2;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19298697	19298790	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001462;gene_id=HG002_chrY_G0000496;Parent=HG002_chrY_T0001462;transcript_name=HG002_chrY_T0001462;gene_name=FAM41AY2;ID=exon:HG002_chrY_T0001462:3;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19298791	19299037	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001462;gene_id=HG002_chrY_G0000496;Parent=HG002_chrY_T0001462;transcript_name=HG002_chrY_T0001462;gene_name=FAM41AY2;ID=intron:HG002_chrY_T0001462:3;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19299038	19299166	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001462;gene_id=HG002_chrY_G0000496;Parent=HG002_chrY_T0001462;transcript_name=HG002_chrY_T0001462;gene_name=FAM41AY2;ID=exon:HG002_chrY_T0001462:4;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19299167	19310501	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001462;gene_id=HG002_chrY_G0000496;Parent=HG002_chrY_T0001462;transcript_name=HG002_chrY_T0001462;gene_name=FAM41AY2;ID=intron:HG002_chrY_T0001462:4;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19310502	19310551	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001462;gene_id=HG002_chrY_G0000496;Parent=HG002_chrY_T0001462;transcript_name=HG002_chrY_T0001462;gene_name=FAM41AY2;ID=exon:HG002_chrY_T0001462:5;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19310552	19311146	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001462;gene_id=HG002_chrY_G0000496;Parent=HG002_chrY_T0001462;transcript_name=HG002_chrY_T0001462;gene_name=FAM41AY2;ID=intron:HG002_chrY_T0001462:5;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19311147	19311304	.	-	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG002_chrY_T0001462;gene_id=HG002_chrY_G0000496;Parent=HG002_chrY_T0001462;transcript_name=HG002_chrY_T0001462;gene_name=FAM41AY2;ID=exon:HG002_chrY_T0001462:6;Name=FAM41AY2;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19295549	19297762	.	-	.	source_gene_common_name=ENSG00000282909;source_gene=ENSG00000282909.3;gene_id=HG002_chrY_G0000497;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000282909;gene_sources=liftoff;ID=HG002_chrY_G0000497;Name=ENSG00000282909
HG002_chrY	CAT	transcript	19295549	19297762	1000	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG002_chrY_T0001461;gene_id=HG002_chrY_G0000497;Parent=HG002_chrY_G0000497;transcript_name=HG002_chrY_T0001461;gene_name=ENSG00000282909;ID=HG002_chrY_T0001461;Name=ENSG00000282909
HG002_chrY	CAT	exon	19295549	19295675	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG002_chrY_T0001461;gene_id=HG002_chrY_G0000497;Parent=HG002_chrY_T0001461;transcript_name=HG002_chrY_T0001461;gene_name=ENSG00000282909;ID=exon:HG002_chrY_T0001461:0;Name=ENSG00000282909;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19295676	19296131	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG002_chrY_T0001461;gene_id=HG002_chrY_G0000497;Parent=HG002_chrY_T0001461;transcript_name=HG002_chrY_T0001461;gene_name=ENSG00000282909;ID=intron:HG002_chrY_T0001461:0;Name=ENSG00000282909;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19296132	19296248	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG002_chrY_T0001461;gene_id=HG002_chrY_G0000497;Parent=HG002_chrY_T0001461;transcript_name=HG002_chrY_T0001461;gene_name=ENSG00000282909;ID=exon:HG002_chrY_T0001461:1;Name=ENSG00000282909;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19296249	19296616	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG002_chrY_T0001461;gene_id=HG002_chrY_G0000497;Parent=HG002_chrY_T0001461;transcript_name=HG002_chrY_T0001461;gene_name=ENSG00000282909;ID=intron:HG002_chrY_T0001461:1;Name=ENSG00000282909;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19296617	19296711	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG002_chrY_T0001461;gene_id=HG002_chrY_G0000497;Parent=HG002_chrY_T0001461;transcript_name=HG002_chrY_T0001461;gene_name=ENSG00000282909;ID=exon:HG002_chrY_T0001461:2;Name=ENSG00000282909;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19296712	19297036	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG002_chrY_T0001461;gene_id=HG002_chrY_G0000497;Parent=HG002_chrY_T0001461;transcript_name=HG002_chrY_T0001461;gene_name=ENSG00000282909;ID=intron:HG002_chrY_T0001461:2;Name=ENSG00000282909;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19297037	19297156	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG002_chrY_T0001461;gene_id=HG002_chrY_G0000497;Parent=HG002_chrY_T0001461;transcript_name=HG002_chrY_T0001461;gene_name=ENSG00000282909;ID=exon:HG002_chrY_T0001461:3;Name=ENSG00000282909;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19297157	19297245	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG002_chrY_T0001461;gene_id=HG002_chrY_G0000497;Parent=HG002_chrY_T0001461;transcript_name=HG002_chrY_T0001461;gene_name=ENSG00000282909;ID=intron:HG002_chrY_T0001461:3;Name=ENSG00000282909;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19297246	19297510	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG002_chrY_T0001461;gene_id=HG002_chrY_G0000497;Parent=HG002_chrY_T0001461;transcript_name=HG002_chrY_T0001461;gene_name=ENSG00000282909;ID=exon:HG002_chrY_T0001461:4;Name=ENSG00000282909;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19297511	19297553	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG002_chrY_T0001461;gene_id=HG002_chrY_G0000497;Parent=HG002_chrY_T0001461;transcript_name=HG002_chrY_T0001461;gene_name=ENSG00000282909;ID=intron:HG002_chrY_T0001461:4;Name=ENSG00000282909;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19297554	19297762	.	-	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG002_chrY_T0001461;gene_id=HG002_chrY_G0000497;Parent=HG002_chrY_T0001461;transcript_name=HG002_chrY_T0001461;gene_name=ENSG00000282909;ID=exon:HG002_chrY_T0001461:5;Name=ENSG00000282909;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19347048	19347376	.	+	.	source_gene_common_name=ELOCP13;source_gene=ENSG00000225716.1;alternative_source_transcripts=ENST00000443934.1;gene_id=HG002_chrY_G0000498;gene_biotype=processed_pseudogene;gene_name=ELOCP13;gene_sources=liftoff;ID=HG002_chrY_G0000498;Name=ELOCP13
HG002_chrY	CAT	transcript	19347048	19347376	1000	+	.	source_transcript=ENST00000443934.1;source_transcript_name=ELOCP13-201;source_gene=ENSG00000225716.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225716.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000443934.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443934.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP13;alternative_source_transcripts=ENST00000443934.1;transcript_id=HG002_chrY_T0001463;gene_id=HG002_chrY_G0000498;Parent=HG002_chrY_G0000498;transcript_name=HG002_chrY_T0001463;gene_name=ELOCP13;ID=HG002_chrY_T0001463;Name=ELOCP13
HG002_chrY	CAT	exon	19347048	19347376	.	+	.	source_transcript=ENST00000443934.1;source_transcript_name=ELOCP13-201;source_gene=ENSG00000225716.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225716.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000443934.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443934.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP13;alternative_source_transcripts=ENST00000443934.1;transcript_id=HG002_chrY_T0001463;gene_id=HG002_chrY_G0000498;Parent=HG002_chrY_T0001463;transcript_name=HG002_chrY_T0001463;gene_name=ELOCP13;ID=exon:HG002_chrY_T0001463:0;Name=ELOCP13;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19359403	19378390	.	-	.	source_gene_common_name=OFD1P4Y;source_gene=ENSG00000229406.1;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;gene_id=HG002_chrY_G0000499;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P4Y;gene_sources=liftoff;ID=HG002_chrY_G0000499;Name=OFD1P4Y
HG002_chrY	CAT	transcript	19359403	19378390	1000	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG002_chrY_T0001464;gene_id=HG002_chrY_G0000499;Parent=HG002_chrY_G0000499;transcript_name=HG002_chrY_T0001464;gene_name=OFD1P4Y;ID=HG002_chrY_T0001464;Name=OFD1P4Y
HG002_chrY	CAT	exon	19359403	19359516	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG002_chrY_T0001464;gene_id=HG002_chrY_G0000499;Parent=HG002_chrY_T0001464;transcript_name=HG002_chrY_T0001464;gene_name=OFD1P4Y;ID=exon:HG002_chrY_T0001464:0;Name=OFD1P4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19359517	19361145	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG002_chrY_T0001464;gene_id=HG002_chrY_G0000499;Parent=HG002_chrY_T0001464;transcript_name=HG002_chrY_T0001464;gene_name=OFD1P4Y;ID=intron:HG002_chrY_T0001464:0;Name=OFD1P4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19361146	19361236	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG002_chrY_T0001464;gene_id=HG002_chrY_G0000499;Parent=HG002_chrY_T0001464;transcript_name=HG002_chrY_T0001464;gene_name=OFD1P4Y;ID=exon:HG002_chrY_T0001464:1;Name=OFD1P4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19361237	19362341	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG002_chrY_T0001464;gene_id=HG002_chrY_G0000499;Parent=HG002_chrY_T0001464;transcript_name=HG002_chrY_T0001464;gene_name=OFD1P4Y;ID=intron:HG002_chrY_T0001464:1;Name=OFD1P4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19362342	19362411	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG002_chrY_T0001464;gene_id=HG002_chrY_G0000499;Parent=HG002_chrY_T0001464;transcript_name=HG002_chrY_T0001464;gene_name=OFD1P4Y;ID=exon:HG002_chrY_T0001464:2;Name=OFD1P4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19362412	19364197	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG002_chrY_T0001464;gene_id=HG002_chrY_G0000499;Parent=HG002_chrY_T0001464;transcript_name=HG002_chrY_T0001464;gene_name=OFD1P4Y;ID=intron:HG002_chrY_T0001464:2;Name=OFD1P4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19364198	19364316	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG002_chrY_T0001464;gene_id=HG002_chrY_G0000499;Parent=HG002_chrY_T0001464;transcript_name=HG002_chrY_T0001464;gene_name=OFD1P4Y;ID=exon:HG002_chrY_T0001464:3;Name=OFD1P4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19364317	19366484	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG002_chrY_T0001464;gene_id=HG002_chrY_G0000499;Parent=HG002_chrY_T0001464;transcript_name=HG002_chrY_T0001464;gene_name=OFD1P4Y;ID=intron:HG002_chrY_T0001464:3;Name=OFD1P4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19366485	19366590	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG002_chrY_T0001464;gene_id=HG002_chrY_G0000499;Parent=HG002_chrY_T0001464;transcript_name=HG002_chrY_T0001464;gene_name=OFD1P4Y;ID=exon:HG002_chrY_T0001464:4;Name=OFD1P4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19366591	19369700	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG002_chrY_T0001464;gene_id=HG002_chrY_G0000499;Parent=HG002_chrY_T0001464;transcript_name=HG002_chrY_T0001464;gene_name=OFD1P4Y;ID=intron:HG002_chrY_T0001464:4;Name=OFD1P4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19369701	19369868	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG002_chrY_T0001464;gene_id=HG002_chrY_G0000499;Parent=HG002_chrY_T0001464;transcript_name=HG002_chrY_T0001464;gene_name=OFD1P4Y;ID=exon:HG002_chrY_T0001464:5;Name=OFD1P4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19369869	19370164	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG002_chrY_T0001464;gene_id=HG002_chrY_G0000499;Parent=HG002_chrY_T0001464;transcript_name=HG002_chrY_T0001464;gene_name=OFD1P4Y;ID=intron:HG002_chrY_T0001464:5;Name=OFD1P4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19370165	19370301	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG002_chrY_T0001464;gene_id=HG002_chrY_G0000499;Parent=HG002_chrY_T0001464;transcript_name=HG002_chrY_T0001464;gene_name=OFD1P4Y;ID=exon:HG002_chrY_T0001464:6;Name=OFD1P4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19370302	19374518	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG002_chrY_T0001464;gene_id=HG002_chrY_G0000499;Parent=HG002_chrY_T0001464;transcript_name=HG002_chrY_T0001464;gene_name=OFD1P4Y;ID=intron:HG002_chrY_T0001464:6;Name=OFD1P4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19374519	19374549	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG002_chrY_T0001464;gene_id=HG002_chrY_G0000499;Parent=HG002_chrY_T0001464;transcript_name=HG002_chrY_T0001464;gene_name=OFD1P4Y;ID=exon:HG002_chrY_T0001464:7;Name=OFD1P4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19374550	19374636	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG002_chrY_T0001464;gene_id=HG002_chrY_G0000499;Parent=HG002_chrY_T0001464;transcript_name=HG002_chrY_T0001464;gene_name=OFD1P4Y;ID=intron:HG002_chrY_T0001464:7;Name=OFD1P4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19374637	19374704	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG002_chrY_T0001464;gene_id=HG002_chrY_G0000499;Parent=HG002_chrY_T0001464;transcript_name=HG002_chrY_T0001464;gene_name=OFD1P4Y;ID=exon:HG002_chrY_T0001464:8;Name=OFD1P4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19374705	19376922	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG002_chrY_T0001464;gene_id=HG002_chrY_G0000499;Parent=HG002_chrY_T0001464;transcript_name=HG002_chrY_T0001464;gene_name=OFD1P4Y;ID=intron:HG002_chrY_T0001464:8;Name=OFD1P4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19376923	19377123	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG002_chrY_T0001464;gene_id=HG002_chrY_G0000499;Parent=HG002_chrY_T0001464;transcript_name=HG002_chrY_T0001464;gene_name=OFD1P4Y;ID=exon:HG002_chrY_T0001464:9;Name=OFD1P4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19377124	19378316	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG002_chrY_T0001464;gene_id=HG002_chrY_G0000499;Parent=HG002_chrY_T0001464;transcript_name=HG002_chrY_T0001464;gene_name=OFD1P4Y;ID=intron:HG002_chrY_T0001464:9;Name=OFD1P4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19378317	19378390	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG002_chrY_T0001464;gene_id=HG002_chrY_G0000499;Parent=HG002_chrY_T0001464;transcript_name=HG002_chrY_T0001464;gene_name=OFD1P4Y;ID=exon:HG002_chrY_T0001464:10;Name=OFD1P4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19386502	19390491	.	+	.	source_gene_common_name=ENSG00000307031;source_gene=ENSG00000307031.1;gene_id=HG002_chrY_G0000500;gene_biotype=lncRNA;gene_name=ENSG00000307031;gene_sources=liftoff;ID=HG002_chrY_G0000500;Name=ENSG00000307031
HG002_chrY	CAT	transcript	19386502	19390491	1000	+	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=HG002_chrY_T0001465;gene_id=HG002_chrY_G0000500;Parent=HG002_chrY_G0000500;transcript_name=HG002_chrY_T0001465;gene_name=ENSG00000307031;ID=HG002_chrY_T0001465;Name=ENSG00000307031
HG002_chrY	CAT	exon	19386502	19386723	.	+	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=HG002_chrY_T0001465;gene_id=HG002_chrY_G0000500;Parent=HG002_chrY_T0001465;transcript_name=HG002_chrY_T0001465;gene_name=ENSG00000307031;ID=exon:HG002_chrY_T0001465:0;Name=ENSG00000307031;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19386724	19387341	.	+	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=HG002_chrY_T0001465;gene_id=HG002_chrY_G0000500;Parent=HG002_chrY_T0001465;transcript_name=HG002_chrY_T0001465;gene_name=ENSG00000307031;ID=intron:HG002_chrY_T0001465:0;Name=ENSG00000307031;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19387342	19387473	.	+	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=HG002_chrY_T0001465;gene_id=HG002_chrY_G0000500;Parent=HG002_chrY_T0001465;transcript_name=HG002_chrY_T0001465;gene_name=ENSG00000307031;ID=exon:HG002_chrY_T0001465:1;Name=ENSG00000307031;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19387474	19390249	.	+	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=HG002_chrY_T0001465;gene_id=HG002_chrY_G0000500;Parent=HG002_chrY_T0001465;transcript_name=HG002_chrY_T0001465;gene_name=ENSG00000307031;ID=intron:HG002_chrY_T0001465:1;Name=ENSG00000307031;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19390250	19390491	.	+	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=HG002_chrY_T0001465;gene_id=HG002_chrY_G0000500;Parent=HG002_chrY_T0001465;transcript_name=HG002_chrY_T0001465;gene_name=ENSG00000307031;ID=exon:HG002_chrY_T0001465:2;Name=ENSG00000307031;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19387342	19393664	.	+	.	source_gene_common_name=USP9YP14;source_gene=ENSG00000227494.2;gene_id=HG002_chrY_G0000501;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=USP9YP14;gene_sources=liftoff;ID=HG002_chrY_G0000501;Name=USP9YP14
HG002_chrY	CAT	transcript	19387342	19393664	1000	+	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=HG002_chrY_T0001466;gene_id=HG002_chrY_G0000501;Parent=HG002_chrY_G0000501;transcript_name=HG002_chrY_T0001466;gene_name=USP9YP14;ID=HG002_chrY_T0001466;Name=USP9YP14
HG002_chrY	CAT	exon	19387342	19387475	.	+	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=HG002_chrY_T0001466;gene_id=HG002_chrY_G0000501;Parent=HG002_chrY_T0001466;transcript_name=HG002_chrY_T0001466;gene_name=USP9YP14;ID=exon:HG002_chrY_T0001466:0;Name=USP9YP14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19387476	19392447	.	+	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=HG002_chrY_T0001466;gene_id=HG002_chrY_G0000501;Parent=HG002_chrY_T0001466;transcript_name=HG002_chrY_T0001466;gene_name=USP9YP14;ID=intron:HG002_chrY_T0001466:0;Name=USP9YP14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19392448	19392604	.	+	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=HG002_chrY_T0001466;gene_id=HG002_chrY_G0000501;Parent=HG002_chrY_T0001466;transcript_name=HG002_chrY_T0001466;gene_name=USP9YP14;ID=exon:HG002_chrY_T0001466:1;Name=USP9YP14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19392605	19393016	.	+	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=HG002_chrY_T0001466;gene_id=HG002_chrY_G0000501;Parent=HG002_chrY_T0001466;transcript_name=HG002_chrY_T0001466;gene_name=USP9YP14;ID=intron:HG002_chrY_T0001466:1;Name=USP9YP14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19393017	19393192	.	+	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=HG002_chrY_T0001466;gene_id=HG002_chrY_G0000501;Parent=HG002_chrY_T0001466;transcript_name=HG002_chrY_T0001466;gene_name=USP9YP14;ID=exon:HG002_chrY_T0001466:2;Name=USP9YP14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19393193	19393568	.	+	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=HG002_chrY_T0001466;gene_id=HG002_chrY_G0000501;Parent=HG002_chrY_T0001466;transcript_name=HG002_chrY_T0001466;gene_name=USP9YP14;ID=intron:HG002_chrY_T0001466:2;Name=USP9YP14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19393569	19393664	.	+	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=HG002_chrY_T0001466;gene_id=HG002_chrY_G0000501;Parent=HG002_chrY_T0001466;transcript_name=HG002_chrY_T0001466;gene_name=USP9YP14;ID=exon:HG002_chrY_T0001466:3;Name=USP9YP14;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19392765	19392926	.	+	.	source_gene_common_name=RNU1-48P;source_gene=ENSG00000252209.1;alternative_source_transcripts=ENST00000516400.1,ENST00000516400.1;gene_id=HG002_chrY_G0000502;gene_biotype=snRNA;gene_name=RNU1-48P;gene_sources=liftoff;ID=HG002_chrY_G0000502;Name=RNU1-48P
HG002_chrY	CAT	transcript	19392765	19392926	1000	+	.	source_transcript=ENST00000516400.1;source_transcript_name=RNU1-48P-201;source_gene=ENSG00000252209.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252209.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516400.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516400.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-48P;alternative_source_transcripts=ENST00000516400.1,ENST00000516400.1;transcript_id=HG002_chrY_T0001467;gene_id=HG002_chrY_G0000502;Parent=HG002_chrY_G0000502;transcript_name=HG002_chrY_T0001467;gene_name=RNU1-48P;ID=HG002_chrY_T0001467;Name=RNU1-48P
HG002_chrY	CAT	exon	19392765	19392926	.	+	.	source_transcript=ENST00000516400.1;source_transcript_name=RNU1-48P-201;source_gene=ENSG00000252209.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252209.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516400.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516400.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-48P;alternative_source_transcripts=ENST00000516400.1,ENST00000516400.1;transcript_id=HG002_chrY_T0001467;gene_id=HG002_chrY_G0000502;Parent=HG002_chrY_T0001467;transcript_name=HG002_chrY_T0001467;gene_name=RNU1-48P;ID=exon:HG002_chrY_T0001467:0;Name=RNU1-48P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19397179	19400555	.	-	.	source_gene_common_name=USP9YP5;source_gene=ENSG00000249634.1;alternative_source_transcripts=ENST00000511770.1;gene_id=HG002_chrY_G0000503;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP5;gene_sources=liftoff,transMap;ID=HG002_chrY_G0000503;Name=USP9YP5
HG002_chrY	CAT	transcript	19397179	19400555	1000	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=transMap;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;alternative_source_transcripts=ENST00000511770.1;transcript_id=HG002_chrY_T0001468;gene_id=HG002_chrY_G0000503;Parent=HG002_chrY_G0000503;transcript_name=HG002_chrY_T0001468;gene_name=USP9YP5;ID=HG002_chrY_T0001468;Name=USP9YP5
HG002_chrY	CAT	exon	19397179	19397369	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=transMap;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;alternative_source_transcripts=ENST00000511770.1;transcript_id=HG002_chrY_T0001468;gene_id=HG002_chrY_G0000503;Parent=HG002_chrY_T0001468;transcript_name=HG002_chrY_T0001468;gene_name=USP9YP5;ID=exon:HG002_chrY_T0001468:0;Name=USP9YP5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19397370	19399273	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=transMap;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;alternative_source_transcripts=ENST00000511770.1;transcript_id=HG002_chrY_T0001468;gene_id=HG002_chrY_G0000503;Parent=HG002_chrY_T0001468;transcript_name=HG002_chrY_T0001468;gene_name=USP9YP5;ID=intron:HG002_chrY_T0001468:0;Name=USP9YP5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19399274	19399565	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=transMap;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;alternative_source_transcripts=ENST00000511770.1;transcript_id=HG002_chrY_T0001468;gene_id=HG002_chrY_G0000503;Parent=HG002_chrY_T0001468;transcript_name=HG002_chrY_T0001468;gene_name=USP9YP5;ID=exon:HG002_chrY_T0001468:1;Name=USP9YP5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19399566	19400334	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=transMap;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;alternative_source_transcripts=ENST00000511770.1;transcript_id=HG002_chrY_T0001468;gene_id=HG002_chrY_G0000503;Parent=HG002_chrY_T0001468;transcript_name=HG002_chrY_T0001468;gene_name=USP9YP5;ID=intron:HG002_chrY_T0001468:1;Name=USP9YP5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19400335	19400555	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=transMap;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;alternative_source_transcripts=ENST00000511770.1;transcript_id=HG002_chrY_T0001468;gene_id=HG002_chrY_G0000503;Parent=HG002_chrY_T0001468;transcript_name=HG002_chrY_T0001468;gene_name=USP9YP5;ID=exon:HG002_chrY_T0001468:2;Name=USP9YP5;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19397179	19400555	1000	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=HG002_chrY_T0001469;gene_id=HG002_chrY_G0000503;Parent=HG002_chrY_G0000503;transcript_name=HG002_chrY_T0001469;gene_name=USP9YP5;ID=HG002_chrY_T0001469;Name=USP9YP5
HG002_chrY	CAT	exon	19397179	19397369	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=HG002_chrY_T0001469;gene_id=HG002_chrY_G0000503;Parent=HG002_chrY_T0001469;transcript_name=HG002_chrY_T0001469;gene_name=USP9YP5;ID=exon:HG002_chrY_T0001469:0;Name=USP9YP5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19397370	19399273	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=HG002_chrY_T0001469;gene_id=HG002_chrY_G0000503;Parent=HG002_chrY_T0001469;transcript_name=HG002_chrY_T0001469;gene_name=USP9YP5;ID=intron:HG002_chrY_T0001469:0;Name=USP9YP5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19399274	19399362	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=HG002_chrY_T0001469;gene_id=HG002_chrY_G0000503;Parent=HG002_chrY_T0001469;transcript_name=HG002_chrY_T0001469;gene_name=USP9YP5;ID=exon:HG002_chrY_T0001469:1;Name=USP9YP5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19399363	19399440	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=HG002_chrY_T0001469;gene_id=HG002_chrY_G0000503;Parent=HG002_chrY_T0001469;transcript_name=HG002_chrY_T0001469;gene_name=USP9YP5;ID=intron:HG002_chrY_T0001469:1;Name=USP9YP5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19399441	19399565	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=HG002_chrY_T0001469;gene_id=HG002_chrY_G0000503;Parent=HG002_chrY_T0001469;transcript_name=HG002_chrY_T0001469;gene_name=USP9YP5;ID=exon:HG002_chrY_T0001469:2;Name=USP9YP5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19399566	19400334	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=HG002_chrY_T0001469;gene_id=HG002_chrY_G0000503;Parent=HG002_chrY_T0001469;transcript_name=HG002_chrY_T0001469;gene_name=USP9YP5;ID=intron:HG002_chrY_T0001469:2;Name=USP9YP5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19400335	19400555	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=HG002_chrY_T0001469;gene_id=HG002_chrY_G0000503;Parent=HG002_chrY_T0001469;transcript_name=HG002_chrY_T0001469;gene_name=USP9YP5;ID=exon:HG002_chrY_T0001469:3;Name=USP9YP5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19398004	19453954	.	+	.	source_gene_common_name=ENSG00000251510;source_gene=ENSG00000251510.2;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;gene_id=HG002_chrY_G0000504;gene_biotype=lncRNA;gene_name=ENSG00000251510;gene_sources=liftoff;ID=HG002_chrY_G0000504;Name=ENSG00000251510
HG002_chrY	CAT	transcript	19398004	19453954	1000	+	.	source_transcript=ENST00000510613.1;source_transcript_name=ENST00000510613;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000510613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510613.1;transcript_score=299.865;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;transcript_id=HG002_chrY_T0001470;gene_id=HG002_chrY_G0000504;Parent=HG002_chrY_G0000504;transcript_name=HG002_chrY_T0001470;gene_name=ENSG00000251510;ID=HG002_chrY_T0001470;Name=ENSG00000251510
HG002_chrY	CAT	exon	19398004	19398081	.	+	.	source_transcript=ENST00000510613.1;source_transcript_name=ENST00000510613;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000510613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510613.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;transcript_id=HG002_chrY_T0001470;gene_id=HG002_chrY_G0000504;Parent=HG002_chrY_T0001470;transcript_name=HG002_chrY_T0001470;gene_name=ENSG00000251510;ID=exon:HG002_chrY_T0001470:0;Name=ENSG00000251510;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19398082	19406875	.	+	.	source_transcript=ENST00000510613.1;source_transcript_name=ENST00000510613;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000510613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510613.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;transcript_id=HG002_chrY_T0001470;gene_id=HG002_chrY_G0000504;Parent=HG002_chrY_T0001470;transcript_name=HG002_chrY_T0001470;gene_name=ENSG00000251510;ID=intron:HG002_chrY_T0001470:0;Name=ENSG00000251510;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19406876	19407307	.	+	.	source_transcript=ENST00000510613.1;source_transcript_name=ENST00000510613;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000510613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510613.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;transcript_id=HG002_chrY_T0001470;gene_id=HG002_chrY_G0000504;Parent=HG002_chrY_T0001470;transcript_name=HG002_chrY_T0001470;gene_name=ENSG00000251510;ID=exon:HG002_chrY_T0001470:1;Name=ENSG00000251510;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19407308	19435894	.	+	.	source_transcript=ENST00000510613.1;source_transcript_name=ENST00000510613;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000510613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510613.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;transcript_id=HG002_chrY_T0001470;gene_id=HG002_chrY_G0000504;Parent=HG002_chrY_T0001470;transcript_name=HG002_chrY_T0001470;gene_name=ENSG00000251510;ID=intron:HG002_chrY_T0001470:1;Name=ENSG00000251510;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19435895	19436092	.	+	.	source_transcript=ENST00000510613.1;source_transcript_name=ENST00000510613;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000510613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510613.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;transcript_id=HG002_chrY_T0001470;gene_id=HG002_chrY_G0000504;Parent=HG002_chrY_T0001470;transcript_name=HG002_chrY_T0001470;gene_name=ENSG00000251510;ID=exon:HG002_chrY_T0001470:2;Name=ENSG00000251510;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19436093	19436742	.	+	.	source_transcript=ENST00000510613.1;source_transcript_name=ENST00000510613;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000510613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510613.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;transcript_id=HG002_chrY_T0001470;gene_id=HG002_chrY_G0000504;Parent=HG002_chrY_T0001470;transcript_name=HG002_chrY_T0001470;gene_name=ENSG00000251510;ID=intron:HG002_chrY_T0001470:2;Name=ENSG00000251510;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19436743	19436851	.	+	.	source_transcript=ENST00000510613.1;source_transcript_name=ENST00000510613;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000510613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510613.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;transcript_id=HG002_chrY_T0001470;gene_id=HG002_chrY_G0000504;Parent=HG002_chrY_T0001470;transcript_name=HG002_chrY_T0001470;gene_name=ENSG00000251510;ID=exon:HG002_chrY_T0001470:3;Name=ENSG00000251510;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19436852	19453288	.	+	.	source_transcript=ENST00000510613.1;source_transcript_name=ENST00000510613;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000510613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510613.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;transcript_id=HG002_chrY_T0001470;gene_id=HG002_chrY_G0000504;Parent=HG002_chrY_T0001470;transcript_name=HG002_chrY_T0001470;gene_name=ENSG00000251510;ID=intron:HG002_chrY_T0001470:3;Name=ENSG00000251510;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19453289	19453954	.	+	.	source_transcript=ENST00000510613.1;source_transcript_name=ENST00000510613;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000510613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510613.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000510613.1,ENST00000510613.1;transcript_id=HG002_chrY_T0001470;gene_id=HG002_chrY_G0000504;Parent=HG002_chrY_T0001470;transcript_name=HG002_chrY_T0001470;gene_name=ENSG00000251510;ID=exon:HG002_chrY_T0001470:4;Name=ENSG00000251510;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19407086	19419423	1000	+	.	source_transcript=ENST00000807038.1;source_transcript_name=ENST00000807038;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807038.1;transcript_score=299.777;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000807038.1,ENST00000807038.1;transcript_id=HG002_chrY_T0001471;gene_id=HG002_chrY_G0000504;Parent=HG002_chrY_G0000504;transcript_name=HG002_chrY_T0001471;gene_name=ENSG00000251510;ID=HG002_chrY_T0001471;Name=ENSG00000251510
HG002_chrY	CAT	exon	19407086	19407307	.	+	.	source_transcript=ENST00000807038.1;source_transcript_name=ENST00000807038;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807038.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000807038.1,ENST00000807038.1;transcript_id=HG002_chrY_T0001471;gene_id=HG002_chrY_G0000504;Parent=HG002_chrY_T0001471;transcript_name=HG002_chrY_T0001471;gene_name=ENSG00000251510;ID=exon:HG002_chrY_T0001471:0;Name=ENSG00000251510;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19407308	19419196	.	+	.	source_transcript=ENST00000807038.1;source_transcript_name=ENST00000807038;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807038.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000807038.1,ENST00000807038.1;transcript_id=HG002_chrY_T0001471;gene_id=HG002_chrY_G0000504;Parent=HG002_chrY_T0001471;transcript_name=HG002_chrY_T0001471;gene_name=ENSG00000251510;ID=intron:HG002_chrY_T0001471:0;Name=ENSG00000251510;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19419197	19419423	.	+	.	source_transcript=ENST00000807038.1;source_transcript_name=ENST00000807038;source_gene=ENSG00000251510.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000251510.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807038.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251510;alternative_source_transcripts=ENST00000807038.1,ENST00000807038.1;transcript_id=HG002_chrY_T0001471;gene_id=HG002_chrY_G0000504;Parent=HG002_chrY_T0001471;transcript_name=HG002_chrY_T0001471;gene_name=ENSG00000251510;ID=exon:HG002_chrY_T0001471:1;Name=ENSG00000251510;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19414833	19415324	.	+	.	source_gene_common_name=XKRYP1;source_gene=ENSG00000238067.1;alternative_source_transcripts=ENST00000423438.1,ENST00000423438.1;gene_id=HG002_chrY_G0000505;gene_biotype=unprocessed_pseudogene;gene_name=XKRYP1;gene_sources=liftoff;ID=HG002_chrY_G0000505;Name=XKRYP1
HG002_chrY	CAT	transcript	19414833	19415324	1000	+	.	source_transcript=ENST00000423438.1;source_transcript_name=XKRYP1-201;source_gene=ENSG00000238067.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238067.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423438.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP1;alternative_source_transcripts=ENST00000423438.1,ENST00000423438.1;transcript_id=HG002_chrY_T0001472;gene_id=HG002_chrY_G0000505;Parent=HG002_chrY_G0000505;transcript_name=HG002_chrY_T0001472;gene_name=XKRYP1;ID=HG002_chrY_T0001472;Name=XKRYP1
HG002_chrY	CAT	exon	19414833	19415324	.	+	.	source_transcript=ENST00000423438.1;source_transcript_name=XKRYP1-201;source_gene=ENSG00000238067.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238067.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423438.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP1;alternative_source_transcripts=ENST00000423438.1,ENST00000423438.1;transcript_id=HG002_chrY_T0001472;gene_id=HG002_chrY_G0000505;Parent=HG002_chrY_T0001472;transcript_name=HG002_chrY_T0001472;gene_name=XKRYP1;ID=exon:HG002_chrY_T0001472:0;Name=XKRYP1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19438582	19438912	.	-	.	source_gene_common_name=ELOCP7;source_gene=ENSG00000230377.1;alternative_source_transcripts=ENST00000439968.1,ENST00000439968.1;gene_id=HG002_chrY_G0000506;gene_biotype=processed_pseudogene;gene_name=ELOCP7;gene_sources=liftoff;ID=HG002_chrY_G0000506;Name=ELOCP7
HG002_chrY	CAT	transcript	19438582	19438912	1000	-	.	source_transcript=ENST00000439968.1;source_transcript_name=ELOCP7-201;source_gene=ENSG00000230377.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000230377.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000439968.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439968.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP7;alternative_source_transcripts=ENST00000439968.1,ENST00000439968.1;transcript_id=HG002_chrY_T0001473;gene_id=HG002_chrY_G0000506;Parent=HG002_chrY_G0000506;transcript_name=HG002_chrY_T0001473;gene_name=ELOCP7;ID=HG002_chrY_T0001473;Name=ELOCP7
HG002_chrY	CAT	exon	19438582	19438912	.	-	.	source_transcript=ENST00000439968.1;source_transcript_name=ELOCP7-201;source_gene=ENSG00000230377.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000230377.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000439968.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439968.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP7;alternative_source_transcripts=ENST00000439968.1,ENST00000439968.1;transcript_id=HG002_chrY_T0001473;gene_id=HG002_chrY_G0000506;Parent=HG002_chrY_T0001473;transcript_name=HG002_chrY_T0001473;gene_name=ELOCP7;ID=exon:HG002_chrY_T0001473:0;Name=ELOCP7;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19447235	19450383	.	+	.	source_gene_common_name=USP9YP1;source_gene=ENSG00000250951.1;alternative_source_transcripts=ENST00000513521.1,ENST00000513521.1;gene_id=HG002_chrY_G0000507;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP1;gene_sources=liftoff;ID=HG002_chrY_G0000507;Name=USP9YP1
HG002_chrY	CAT	transcript	19447235	19450383	1000	+	.	source_transcript=ENST00000513521.1;source_transcript_name=USP9YP1-201;source_gene=ENSG00000250951.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000250951.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000513521.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000513521.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP1;alternative_source_transcripts=ENST00000513521.1,ENST00000513521.1;transcript_id=HG002_chrY_T0001474;gene_id=HG002_chrY_G0000507;Parent=HG002_chrY_G0000507;transcript_name=HG002_chrY_T0001474;gene_name=USP9YP1;ID=HG002_chrY_T0001474;Name=USP9YP1
HG002_chrY	CAT	exon	19447235	19447364	.	+	.	source_transcript=ENST00000513521.1;source_transcript_name=USP9YP1-201;source_gene=ENSG00000250951.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000250951.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000513521.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000513521.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP1;alternative_source_transcripts=ENST00000513521.1,ENST00000513521.1;transcript_id=HG002_chrY_T0001474;gene_id=HG002_chrY_G0000507;Parent=HG002_chrY_T0001474;transcript_name=HG002_chrY_T0001474;gene_name=USP9YP1;ID=exon:HG002_chrY_T0001474:0;Name=USP9YP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19447365	19449100	.	+	.	source_transcript=ENST00000513521.1;source_transcript_name=USP9YP1-201;source_gene=ENSG00000250951.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000250951.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000513521.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000513521.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP1;alternative_source_transcripts=ENST00000513521.1,ENST00000513521.1;transcript_id=HG002_chrY_T0001474;gene_id=HG002_chrY_G0000507;Parent=HG002_chrY_T0001474;transcript_name=HG002_chrY_T0001474;gene_name=USP9YP1;ID=intron:HG002_chrY_T0001474:0;Name=USP9YP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19449101	19449847	.	+	.	source_transcript=ENST00000513521.1;source_transcript_name=USP9YP1-201;source_gene=ENSG00000250951.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000250951.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000513521.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000513521.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP1;alternative_source_transcripts=ENST00000513521.1,ENST00000513521.1;transcript_id=HG002_chrY_T0001474;gene_id=HG002_chrY_G0000507;Parent=HG002_chrY_T0001474;transcript_name=HG002_chrY_T0001474;gene_name=USP9YP1;ID=exon:HG002_chrY_T0001474:1;Name=USP9YP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19449848	19450258	.	+	.	source_transcript=ENST00000513521.1;source_transcript_name=USP9YP1-201;source_gene=ENSG00000250951.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000250951.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000513521.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000513521.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP1;alternative_source_transcripts=ENST00000513521.1,ENST00000513521.1;transcript_id=HG002_chrY_T0001474;gene_id=HG002_chrY_G0000507;Parent=HG002_chrY_T0001474;transcript_name=HG002_chrY_T0001474;gene_name=USP9YP1;ID=intron:HG002_chrY_T0001474:1;Name=USP9YP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19450259	19450383	.	+	.	source_transcript=ENST00000513521.1;source_transcript_name=USP9YP1-201;source_gene=ENSG00000250951.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000250951.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000513521.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000513521.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP1;alternative_source_transcripts=ENST00000513521.1,ENST00000513521.1;transcript_id=HG002_chrY_T0001474;gene_id=HG002_chrY_G0000507;Parent=HG002_chrY_T0001474;transcript_name=HG002_chrY_T0001474;gene_name=USP9YP1;ID=exon:HG002_chrY_T0001474:2;Name=USP9YP1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19452947	19495187	.	+	.	source_gene_common_name=HSFY1;source_gene=ENSG00000172468.14;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;gene_id=HG002_chrY_G0000508;gene_biotype=protein_coding;gene_name=HSFY1;gene_sources=liftoff;ID=HG002_chrY_G0000508;Name=HSFY1
HG002_chrY	CAT	transcript	19452947	19495187	100	+	.	source_transcript=ENST00000309834.8;source_transcript_name=HSFY1-202;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000309834.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000309834.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;transcript_id=HG002_chrY_T0001475;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_G0000508;transcript_name=HG002_chrY_T0001475;gene_name=HSFY1;ID=HG002_chrY_T0001475;Name=HSFY1
HG002_chrY	CAT	exon	19452947	19453556	.	+	.	source_transcript=ENST00000309834.8;source_transcript_name=HSFY1-202;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000309834.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000309834.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;transcript_id=HG002_chrY_T0001475;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001475;transcript_name=HG002_chrY_T0001475;gene_name=HSFY1;ID=exon:HG002_chrY_T0001475:0;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	19453044	19453556	.	+	0	source_transcript=ENST00000309834.8;source_transcript_name=HSFY1-202;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000309834.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000309834.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;transcript_id=HG002_chrY_T0001475;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001475;transcript_name=HG002_chrY_T0001475;gene_name=HSFY1;ID=CDS:HG002_chrY_T0001475:0;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	19453044	19453046	.	+	0	source_transcript=ENST00000309834.8;source_transcript_name=HSFY1-202;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000309834.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000309834.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;transcript_id=HG002_chrY_T0001475;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001475;transcript_name=HG002_chrY_T0001475;gene_name=HSFY1;ID=start_codon:HG002_chrY_T0001475;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19453557	19494759	.	+	.	source_transcript=ENST00000309834.8;source_transcript_name=HSFY1-202;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000309834.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000309834.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;transcript_id=HG002_chrY_T0001475;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001475;transcript_name=HG002_chrY_T0001475;gene_name=HSFY1;ID=intron:HG002_chrY_T0001475:0;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19494760	19495187	.	+	.	source_transcript=ENST00000309834.8;source_transcript_name=HSFY1-202;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000309834.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000309834.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;transcript_id=HG002_chrY_T0001475;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001475;transcript_name=HG002_chrY_T0001475;gene_name=HSFY1;ID=exon:HG002_chrY_T0001475:1;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	19494760	19494858	.	+	0	source_transcript=ENST00000309834.8;source_transcript_name=HSFY1-202;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000309834.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000309834.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;transcript_id=HG002_chrY_T0001475;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001475;transcript_name=HG002_chrY_T0001475;gene_name=HSFY1;ID=CDS:HG002_chrY_T0001475:1;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	19494856	19494858	.	+	0	source_transcript=ENST00000309834.8;source_transcript_name=HSFY1-202;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000309834.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000309834.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;transcript_id=HG002_chrY_T0001475;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001475;transcript_name=HG002_chrY_T0001475;gene_name=HSFY1;ID=stop_codon:HG002_chrY_T0001475;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19452947	19495187	1000	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG002_chrY_T0001476;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_G0000508;transcript_name=HG002_chrY_T0001476;gene_name=HSFY1;ID=HG002_chrY_T0001476;Name=HSFY1
HG002_chrY	CAT	exon	19452947	19453556	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG002_chrY_T0001476;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001476;transcript_name=HG002_chrY_T0001476;gene_name=HSFY1;ID=exon:HG002_chrY_T0001476:0;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	19453044	19453556	.	+	0	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG002_chrY_T0001476;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001476;transcript_name=HG002_chrY_T0001476;gene_name=HSFY1;ID=CDS:HG002_chrY_T0001476:0;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	19453044	19453046	.	+	0	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG002_chrY_T0001476;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001476;transcript_name=HG002_chrY_T0001476;gene_name=HSFY1;ID=start_codon:HG002_chrY_T0001476;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19453557	19456369	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG002_chrY_T0001476;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001476;transcript_name=HG002_chrY_T0001476;gene_name=HSFY1;ID=intron:HG002_chrY_T0001476:0;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19456370	19456479	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG002_chrY_T0001476;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001476;transcript_name=HG002_chrY_T0001476;gene_name=HSFY1;ID=exon:HG002_chrY_T0001476:1;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	19456370	19456479	.	+	0	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG002_chrY_T0001476;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001476;transcript_name=HG002_chrY_T0001476;gene_name=HSFY1;ID=CDS:HG002_chrY_T0001476:1;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19456480	19457040	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG002_chrY_T0001476;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001476;transcript_name=HG002_chrY_T0001476;gene_name=HSFY1;ID=intron:HG002_chrY_T0001476:1;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19457041	19457127	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG002_chrY_T0001476;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001476;transcript_name=HG002_chrY_T0001476;gene_name=HSFY1;ID=exon:HG002_chrY_T0001476:2;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	19457041	19457062	.	+	1	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG002_chrY_T0001476;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001476;transcript_name=HG002_chrY_T0001476;gene_name=HSFY1;ID=CDS:HG002_chrY_T0001476:2;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	19457060	19457062	.	+	0	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG002_chrY_T0001476;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001476;transcript_name=HG002_chrY_T0001476;gene_name=HSFY1;ID=stop_codon:HG002_chrY_T0001476;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19457128	19458174	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG002_chrY_T0001476;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001476;transcript_name=HG002_chrY_T0001476;gene_name=HSFY1;ID=intron:HG002_chrY_T0001476:2;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19458175	19458329	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG002_chrY_T0001476;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001476;transcript_name=HG002_chrY_T0001476;gene_name=HSFY1;ID=exon:HG002_chrY_T0001476:3;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19458330	19488896	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG002_chrY_T0001476;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001476;transcript_name=HG002_chrY_T0001476;gene_name=HSFY1;ID=intron:HG002_chrY_T0001476:3;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19488897	19488982	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG002_chrY_T0001476;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001476;transcript_name=HG002_chrY_T0001476;gene_name=HSFY1;ID=exon:HG002_chrY_T0001476:4;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19488983	19494759	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG002_chrY_T0001476;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001476;transcript_name=HG002_chrY_T0001476;gene_name=HSFY1;ID=intron:HG002_chrY_T0001476:4;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19494760	19495187	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=HG002_chrY_T0001476;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001476;transcript_name=HG002_chrY_T0001476;gene_name=HSFY1;ID=exon:HG002_chrY_T0001476:5;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19452976	19454848	100	+	.	source_transcript=ENST00000307393.3;source_transcript_name=HSFY1-201;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000307393.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000307393.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000307393.3,ENST00000307393.3;transcript_id=HG002_chrY_T0001477;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_G0000508;transcript_name=HG002_chrY_T0001477;gene_name=HSFY1;ID=HG002_chrY_T0001477;Name=HSFY1
HG002_chrY	CAT	exon	19452976	19453556	.	+	.	source_transcript=ENST00000307393.3;source_transcript_name=HSFY1-201;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000307393.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000307393.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000307393.3,ENST00000307393.3;transcript_id=HG002_chrY_T0001477;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001477;transcript_name=HG002_chrY_T0001477;gene_name=HSFY1;ID=exon:HG002_chrY_T0001477:0;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	19453044	19453556	.	+	0	source_transcript=ENST00000307393.3;source_transcript_name=HSFY1-201;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000307393.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000307393.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000307393.3,ENST00000307393.3;transcript_id=HG002_chrY_T0001477;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001477;transcript_name=HG002_chrY_T0001477;gene_name=HSFY1;ID=CDS:HG002_chrY_T0001477:0;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	19453044	19453046	.	+	0	source_transcript=ENST00000307393.3;source_transcript_name=HSFY1-201;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000307393.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000307393.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000307393.3,ENST00000307393.3;transcript_id=HG002_chrY_T0001477;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001477;transcript_name=HG002_chrY_T0001477;gene_name=HSFY1;ID=start_codon:HG002_chrY_T0001477;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19453557	19454034	.	+	.	source_transcript=ENST00000307393.3;source_transcript_name=HSFY1-201;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000307393.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000307393.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000307393.3,ENST00000307393.3;transcript_id=HG002_chrY_T0001477;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001477;transcript_name=HG002_chrY_T0001477;gene_name=HSFY1;ID=intron:HG002_chrY_T0001477:0;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19454035	19454848	.	+	.	source_transcript=ENST00000307393.3;source_transcript_name=HSFY1-201;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000307393.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000307393.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000307393.3,ENST00000307393.3;transcript_id=HG002_chrY_T0001477;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001477;transcript_name=HG002_chrY_T0001477;gene_name=HSFY1;ID=exon:HG002_chrY_T0001477:1;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	19454035	19454727	.	+	0	source_transcript=ENST00000307393.3;source_transcript_name=HSFY1-201;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000307393.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000307393.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000307393.3,ENST00000307393.3;transcript_id=HG002_chrY_T0001477;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001477;transcript_name=HG002_chrY_T0001477;gene_name=HSFY1;ID=CDS:HG002_chrY_T0001477:1;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	19454725	19454727	.	+	0	source_transcript=ENST00000307393.3;source_transcript_name=HSFY1-201;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000307393.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000307393.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000307393.3,ENST00000307393.3;transcript_id=HG002_chrY_T0001477;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001477;transcript_name=HG002_chrY_T0001477;gene_name=HSFY1;ID=stop_codon:HG002_chrY_T0001477;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19452976	19457723	100	+	.	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=HG002_chrY_T0001478;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_G0000508;transcript_name=HG002_chrY_T0001478;gene_name=HSFY1;ID=HG002_chrY_T0001478;Name=HSFY1
HG002_chrY	CAT	exon	19452976	19453556	.	+	.	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=HG002_chrY_T0001478;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001478;transcript_name=HG002_chrY_T0001478;gene_name=HSFY1;ID=exon:HG002_chrY_T0001478:0;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	19453044	19453556	.	+	0	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=HG002_chrY_T0001478;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001478;transcript_name=HG002_chrY_T0001478;gene_name=HSFY1;ID=CDS:HG002_chrY_T0001478:0;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	19453044	19453046	.	+	0	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=HG002_chrY_T0001478;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001478;transcript_name=HG002_chrY_T0001478;gene_name=HSFY1;ID=start_codon:HG002_chrY_T0001478;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19453557	19456369	.	+	.	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=HG002_chrY_T0001478;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001478;transcript_name=HG002_chrY_T0001478;gene_name=HSFY1;ID=intron:HG002_chrY_T0001478:0;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19456370	19456479	.	+	.	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=HG002_chrY_T0001478;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001478;transcript_name=HG002_chrY_T0001478;gene_name=HSFY1;ID=exon:HG002_chrY_T0001478:1;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	19456370	19456479	.	+	0	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=HG002_chrY_T0001478;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001478;transcript_name=HG002_chrY_T0001478;gene_name=HSFY1;ID=CDS:HG002_chrY_T0001478:1;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19456480	19457040	.	+	.	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=HG002_chrY_T0001478;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001478;transcript_name=HG002_chrY_T0001478;gene_name=HSFY1;ID=intron:HG002_chrY_T0001478:1;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19457041	19457723	.	+	.	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=HG002_chrY_T0001478;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001478;transcript_name=HG002_chrY_T0001478;gene_name=HSFY1;ID=exon:HG002_chrY_T0001478:2;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	19457041	19457062	.	+	1	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=HG002_chrY_T0001478;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001478;transcript_name=HG002_chrY_T0001478;gene_name=HSFY1;ID=CDS:HG002_chrY_T0001478:2;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	19457060	19457062	.	+	0	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=HG002_chrY_T0001478;gene_id=HG002_chrY_G0000508;Parent=HG002_chrY_T0001478;transcript_name=HG002_chrY_T0001478;gene_name=HSFY1;ID=stop_codon:HG002_chrY_T0001478;Name=HSFY1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19484641	19484784	.	+	.	source_gene_common_name=GPM6BP1;source_gene=ENSG00000230458.1;alternative_source_transcripts=ENST00000446387.1,ENST00000446387.1;gene_id=HG002_chrY_G0000509;gene_biotype=unprocessed_pseudogene;gene_name=GPM6BP1;gene_sources=liftoff;ID=HG002_chrY_G0000509;Name=GPM6BP1
HG002_chrY	CAT	transcript	19484641	19484784	1000	+	.	source_transcript=ENST00000446387.1;source_transcript_name=GPM6BP1-201;source_gene=ENSG00000230458.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230458.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000446387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446387.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPM6BP1;alternative_source_transcripts=ENST00000446387.1,ENST00000446387.1;transcript_id=HG002_chrY_T0001479;gene_id=HG002_chrY_G0000509;Parent=HG002_chrY_G0000509;transcript_name=HG002_chrY_T0001479;gene_name=GPM6BP1;ID=HG002_chrY_T0001479;Name=GPM6BP1
HG002_chrY	CAT	exon	19484641	19484784	.	+	.	source_transcript=ENST00000446387.1;source_transcript_name=GPM6BP1-201;source_gene=ENSG00000230458.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230458.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000446387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446387.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPM6BP1;alternative_source_transcripts=ENST00000446387.1,ENST00000446387.1;transcript_id=HG002_chrY_T0001479;gene_id=HG002_chrY_G0000509;Parent=HG002_chrY_T0001479;transcript_name=HG002_chrY_T0001479;gene_name=GPM6BP1;ID=exon:HG002_chrY_T0001479:0;Name=GPM6BP1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19487430	19504334	.	-	.	source_gene_common_name=TTTY9B;source_gene=ENSG00000131007.10;gene_id=HG002_chrY_G0000510;gene_biotype=lncRNA;gene_name=TTTY9B;gene_sources=liftoff;ID=HG002_chrY_G0000510;Name=TTTY9B
HG002_chrY	CAT	transcript	19487430	19496745	1000	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG002_chrY_T0001480;gene_id=HG002_chrY_G0000510;Parent=HG002_chrY_G0000510;transcript_name=HG002_chrY_T0001480;gene_name=TTTY9B;ID=HG002_chrY_T0001480;Name=TTTY9B
HG002_chrY	CAT	exon	19487430	19488572	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG002_chrY_T0001480;gene_id=HG002_chrY_G0000510;Parent=HG002_chrY_T0001480;transcript_name=HG002_chrY_T0001480;gene_name=TTTY9B;ID=exon:HG002_chrY_T0001480:0;Name=TTTY9B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19488573	19493635	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG002_chrY_T0001480;gene_id=HG002_chrY_G0000510;Parent=HG002_chrY_T0001480;transcript_name=HG002_chrY_T0001480;gene_name=TTTY9B;ID=intron:HG002_chrY_T0001480:0;Name=TTTY9B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19493636	19493772	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG002_chrY_T0001480;gene_id=HG002_chrY_G0000510;Parent=HG002_chrY_T0001480;transcript_name=HG002_chrY_T0001480;gene_name=TTTY9B;ID=exon:HG002_chrY_T0001480:1;Name=TTTY9B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19493773	19494354	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG002_chrY_T0001480;gene_id=HG002_chrY_G0000510;Parent=HG002_chrY_T0001480;transcript_name=HG002_chrY_T0001480;gene_name=TTTY9B;ID=intron:HG002_chrY_T0001480:1;Name=TTTY9B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19494355	19494468	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG002_chrY_T0001480;gene_id=HG002_chrY_G0000510;Parent=HG002_chrY_T0001480;transcript_name=HG002_chrY_T0001480;gene_name=TTTY9B;ID=exon:HG002_chrY_T0001480:2;Name=TTTY9B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19494469	19494829	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG002_chrY_T0001480;gene_id=HG002_chrY_G0000510;Parent=HG002_chrY_T0001480;transcript_name=HG002_chrY_T0001480;gene_name=TTTY9B;ID=intron:HG002_chrY_T0001480:2;Name=TTTY9B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19494830	19494930	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG002_chrY_T0001480;gene_id=HG002_chrY_G0000510;Parent=HG002_chrY_T0001480;transcript_name=HG002_chrY_T0001480;gene_name=TTTY9B;ID=exon:HG002_chrY_T0001480:3;Name=TTTY9B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19494931	19496603	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG002_chrY_T0001480;gene_id=HG002_chrY_G0000510;Parent=HG002_chrY_T0001480;transcript_name=HG002_chrY_T0001480;gene_name=TTTY9B;ID=intron:HG002_chrY_T0001480:3;Name=TTTY9B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19496604	19496745	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG002_chrY_T0001480;gene_id=HG002_chrY_G0000510;Parent=HG002_chrY_T0001480;transcript_name=HG002_chrY_T0001480;gene_name=TTTY9B;ID=exon:HG002_chrY_T0001480:4;Name=TTTY9B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19487430	19494936	1000	-	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG002_chrY_T0001481;gene_id=HG002_chrY_G0000510;Parent=HG002_chrY_G0000510;transcript_name=HG002_chrY_T0001481;gene_name=TTTY9B;ID=HG002_chrY_T0001481;Name=TTTY9B
HG002_chrY	CAT	exon	19487430	19488572	.	-	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG002_chrY_T0001481;gene_id=HG002_chrY_G0000510;Parent=HG002_chrY_T0001481;transcript_name=HG002_chrY_T0001481;gene_name=TTTY9B;ID=exon:HG002_chrY_T0001481:0;Name=TTTY9B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19488573	19493635	.	-	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG002_chrY_T0001481;gene_id=HG002_chrY_G0000510;Parent=HG002_chrY_T0001481;transcript_name=HG002_chrY_T0001481;gene_name=TTTY9B;ID=intron:HG002_chrY_T0001481:0;Name=TTTY9B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19493636	19493772	.	-	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG002_chrY_T0001481;gene_id=HG002_chrY_G0000510;Parent=HG002_chrY_T0001481;transcript_name=HG002_chrY_T0001481;gene_name=TTTY9B;ID=exon:HG002_chrY_T0001481:1;Name=TTTY9B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19493773	19494354	.	-	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG002_chrY_T0001481;gene_id=HG002_chrY_G0000510;Parent=HG002_chrY_T0001481;transcript_name=HG002_chrY_T0001481;gene_name=TTTY9B;ID=intron:HG002_chrY_T0001481:1;Name=TTTY9B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19494355	19494468	.	-	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG002_chrY_T0001481;gene_id=HG002_chrY_G0000510;Parent=HG002_chrY_T0001481;transcript_name=HG002_chrY_T0001481;gene_name=TTTY9B;ID=exon:HG002_chrY_T0001481:2;Name=TTTY9B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19494469	19494829	.	-	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG002_chrY_T0001481;gene_id=HG002_chrY_G0000510;Parent=HG002_chrY_T0001481;transcript_name=HG002_chrY_T0001481;gene_name=TTTY9B;ID=intron:HG002_chrY_T0001481:2;Name=TTTY9B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19494830	19494936	.	-	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG002_chrY_T0001481;gene_id=HG002_chrY_G0000510;Parent=HG002_chrY_T0001481;transcript_name=HG002_chrY_T0001481;gene_name=TTTY9B;ID=exon:HG002_chrY_T0001481:3;Name=TTTY9B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19496178	19504334	1000	-	.	source_transcript=ENST00000776413.1;source_transcript_name=TTTY9B-203;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776413.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776413.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG002_chrY_T0001483;gene_id=HG002_chrY_G0000510;Parent=HG002_chrY_G0000510;transcript_name=HG002_chrY_T0001483;gene_name=TTTY9B;ID=HG002_chrY_T0001483;Name=TTTY9B
HG002_chrY	CAT	exon	19496178	19496823	.	-	.	source_transcript=ENST00000776413.1;source_transcript_name=TTTY9B-203;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776413.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776413.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG002_chrY_T0001483;gene_id=HG002_chrY_G0000510;Parent=HG002_chrY_T0001483;transcript_name=HG002_chrY_T0001483;gene_name=TTTY9B;ID=exon:HG002_chrY_T0001483:0;Name=TTTY9B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19496824	19503634	.	-	.	source_transcript=ENST00000776413.1;source_transcript_name=TTTY9B-203;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776413.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776413.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG002_chrY_T0001483;gene_id=HG002_chrY_G0000510;Parent=HG002_chrY_T0001483;transcript_name=HG002_chrY_T0001483;gene_name=TTTY9B;ID=intron:HG002_chrY_T0001483:0;Name=TTTY9B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19503635	19503896	.	-	.	source_transcript=ENST00000776413.1;source_transcript_name=TTTY9B-203;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776413.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776413.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG002_chrY_T0001483;gene_id=HG002_chrY_G0000510;Parent=HG002_chrY_T0001483;transcript_name=HG002_chrY_T0001483;gene_name=TTTY9B;ID=exon:HG002_chrY_T0001483:1;Name=TTTY9B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19503897	19504077	.	-	.	source_transcript=ENST00000776413.1;source_transcript_name=TTTY9B-203;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776413.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776413.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG002_chrY_T0001483;gene_id=HG002_chrY_G0000510;Parent=HG002_chrY_T0001483;transcript_name=HG002_chrY_T0001483;gene_name=TTTY9B;ID=intron:HG002_chrY_T0001483:1;Name=TTTY9B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19504078	19504334	.	-	.	source_transcript=ENST00000776413.1;source_transcript_name=TTTY9B-203;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776413.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776413.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG002_chrY_T0001483;gene_id=HG002_chrY_G0000510;Parent=HG002_chrY_T0001483;transcript_name=HG002_chrY_T0001483;gene_name=TTTY9B;ID=exon:HG002_chrY_T0001483:2;Name=TTTY9B;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19488287	19535301	.	-	.	source_gene_common_name=OFD1P5Y;source_gene=ENSG00000240438.2;gene_id=HG002_chrY_G0000511;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=OFD1P5Y;gene_sources=liftoff;ID=HG002_chrY_G0000511;Name=OFD1P5Y
HG002_chrY	CAT	transcript	19488287	19535301	1000	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_G0000511;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=HG002_chrY_T0001482;Name=OFD1P5Y
HG002_chrY	CAT	exon	19488287	19488580	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=exon:HG002_chrY_T0001482:0;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19488581	19488877	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=intron:HG002_chrY_T0001482:0;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19488878	19488944	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=exon:HG002_chrY_T0001482:1;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19488945	19490133	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=intron:HG002_chrY_T0001482:1;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19490134	19490284	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=exon:HG002_chrY_T0001482:2;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19490285	19493635	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=intron:HG002_chrY_T0001482:2;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19493636	19493772	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=exon:HG002_chrY_T0001482:3;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19493773	19494829	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=intron:HG002_chrY_T0001482:3;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19494830	19494930	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=exon:HG002_chrY_T0001482:4;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19494931	19505442	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=intron:HG002_chrY_T0001482:4;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19505443	19505554	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=exon:HG002_chrY_T0001482:5;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19505555	19505929	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=intron:HG002_chrY_T0001482:5;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19505930	19506556	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=exon:HG002_chrY_T0001482:6;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19506557	19508603	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=intron:HG002_chrY_T0001482:6;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19508604	19508715	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=exon:HG002_chrY_T0001482:7;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19508716	19509249	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=intron:HG002_chrY_T0001482:7;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19509250	19509379	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=exon:HG002_chrY_T0001482:8;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19509380	19510246	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=intron:HG002_chrY_T0001482:8;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19510247	19510382	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=exon:HG002_chrY_T0001482:9;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19510383	19511970	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=intron:HG002_chrY_T0001482:9;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19511971	19512044	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=exon:HG002_chrY_T0001482:10;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19512045	19513680	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=intron:HG002_chrY_T0001482:10;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19513681	19513808	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=exon:HG002_chrY_T0001482:11;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19513809	19515560	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=intron:HG002_chrY_T0001482:11;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19515561	19515667	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=exon:HG002_chrY_T0001482:12;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19515668	19518464	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=intron:HG002_chrY_T0001482:12;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19518465	19518615	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=exon:HG002_chrY_T0001482:13;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19518616	19520419	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=intron:HG002_chrY_T0001482:13;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19520420	19520504	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=exon:HG002_chrY_T0001482:14;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19520505	19528289	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=intron:HG002_chrY_T0001482:14;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19528290	19528461	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=exon:HG002_chrY_T0001482:15;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19528462	19533243	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=intron:HG002_chrY_T0001482:15;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19533244	19533380	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=exon:HG002_chrY_T0001482:16;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19533381	19535196	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=intron:HG002_chrY_T0001482:16;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19535197	19535301	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG002_chrY_T0001482;gene_id=HG002_chrY_G0000511;Parent=HG002_chrY_T0001482;transcript_name=HG002_chrY_T0001482;gene_name=OFD1P5Y;ID=exon:HG002_chrY_T0001482:17;Name=OFD1P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19502529	19535317	.	+	.	source_gene_common_name=ENSG00000301107;source_gene=ENSG00000301107.1;alternative_source_transcripts=ENST00000776238.1,ENST00000776238.1;gene_id=HG002_chrY_G0000512;gene_biotype=lncRNA;gene_name=ENSG00000301107;gene_sources=liftoff;ID=HG002_chrY_G0000512;Name=ENSG00000301107
HG002_chrY	CAT	transcript	19502529	19535317	1000	+	.	source_transcript=ENST00000776238.1;source_transcript_name=ENST00000776238;source_gene=ENSG00000301107.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301107.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776238.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301107;alternative_source_transcripts=ENST00000776238.1,ENST00000776238.1;transcript_id=HG002_chrY_T0001484;gene_id=HG002_chrY_G0000512;Parent=HG002_chrY_G0000512;transcript_name=HG002_chrY_T0001484;gene_name=ENSG00000301107;ID=HG002_chrY_T0001484;Name=ENSG00000301107
HG002_chrY	CAT	exon	19502529	19502611	.	+	.	source_transcript=ENST00000776238.1;source_transcript_name=ENST00000776238;source_gene=ENSG00000301107.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301107.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301107;alternative_source_transcripts=ENST00000776238.1,ENST00000776238.1;transcript_id=HG002_chrY_T0001484;gene_id=HG002_chrY_G0000512;Parent=HG002_chrY_T0001484;transcript_name=HG002_chrY_T0001484;gene_name=ENSG00000301107;ID=exon:HG002_chrY_T0001484:0;Name=ENSG00000301107;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19502612	19526038	.	+	.	source_transcript=ENST00000776238.1;source_transcript_name=ENST00000776238;source_gene=ENSG00000301107.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301107.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301107;alternative_source_transcripts=ENST00000776238.1,ENST00000776238.1;transcript_id=HG002_chrY_T0001484;gene_id=HG002_chrY_G0000512;Parent=HG002_chrY_T0001484;transcript_name=HG002_chrY_T0001484;gene_name=ENSG00000301107;ID=intron:HG002_chrY_T0001484:0;Name=ENSG00000301107;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19526039	19526129	.	+	.	source_transcript=ENST00000776238.1;source_transcript_name=ENST00000776238;source_gene=ENSG00000301107.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301107.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301107;alternative_source_transcripts=ENST00000776238.1,ENST00000776238.1;transcript_id=HG002_chrY_T0001484;gene_id=HG002_chrY_G0000512;Parent=HG002_chrY_T0001484;transcript_name=HG002_chrY_T0001484;gene_name=ENSG00000301107;ID=exon:HG002_chrY_T0001484:1;Name=ENSG00000301107;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19526130	19535085	.	+	.	source_transcript=ENST00000776238.1;source_transcript_name=ENST00000776238;source_gene=ENSG00000301107.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301107.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301107;alternative_source_transcripts=ENST00000776238.1,ENST00000776238.1;transcript_id=HG002_chrY_T0001484;gene_id=HG002_chrY_G0000512;Parent=HG002_chrY_T0001484;transcript_name=HG002_chrY_T0001484;gene_name=ENSG00000301107;ID=intron:HG002_chrY_T0001484:1;Name=ENSG00000301107;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19535086	19535317	.	+	.	source_transcript=ENST00000776238.1;source_transcript_name=ENST00000776238;source_gene=ENSG00000301107.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301107.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301107;alternative_source_transcripts=ENST00000776238.1,ENST00000776238.1;transcript_id=HG002_chrY_T0001484;gene_id=HG002_chrY_G0000512;Parent=HG002_chrY_T0001484;transcript_name=HG002_chrY_T0001484;gene_name=ENSG00000301107;ID=exon:HG002_chrY_T0001484:2;Name=ENSG00000301107;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19555917	19556525	.	+	.	source_gene_common_name=RAB9AP4;source_gene=ENSG00000235479.1;alternative_source_transcripts=ENST00000415230.1,ENST00000415230.1;gene_id=HG002_chrY_G0000513;gene_biotype=unprocessed_pseudogene;gene_name=RAB9AP4;gene_sources=liftoff;ID=HG002_chrY_G0000513;Name=RAB9AP4
HG002_chrY	CAT	transcript	19555917	19556525	1000	+	.	source_transcript=ENST00000415230.1;source_transcript_name=RAB9AP4-201;source_gene=ENSG00000235479.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235479.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415230.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP4;alternative_source_transcripts=ENST00000415230.1,ENST00000415230.1;transcript_id=HG002_chrY_T0001485;gene_id=HG002_chrY_G0000513;Parent=HG002_chrY_G0000513;transcript_name=HG002_chrY_T0001485;gene_name=RAB9AP4;ID=HG002_chrY_T0001485;Name=RAB9AP4
HG002_chrY	CAT	exon	19555917	19556525	.	+	.	source_transcript=ENST00000415230.1;source_transcript_name=RAB9AP4-201;source_gene=ENSG00000235479.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235479.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP4;alternative_source_transcripts=ENST00000415230.1,ENST00000415230.1;transcript_id=HG002_chrY_T0001485;gene_id=HG002_chrY_G0000513;Parent=HG002_chrY_T0001485;transcript_name=HG002_chrY_T0001485;gene_name=RAB9AP4;ID=exon:HG002_chrY_T0001485:0;Name=RAB9AP4;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19561763	19562433	.	-	.	source_gene_common_name=TRAPPC2P7;source_gene=ENSG00000249606.1;alternative_source_transcripts=ENST00000509650.1,ENST00000509650.1;gene_id=HG002_chrY_G0000514;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P7;gene_sources=liftoff;ID=HG002_chrY_G0000514;Name=TRAPPC2P7
HG002_chrY	CAT	transcript	19561763	19562433	1000	-	.	source_transcript=ENST00000509650.1;source_transcript_name=TRAPPC2P7-201;source_gene=ENSG00000249606.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249606.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509650.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509650.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P7;alternative_source_transcripts=ENST00000509650.1,ENST00000509650.1;transcript_id=HG002_chrY_T0001486;gene_id=HG002_chrY_G0000514;Parent=HG002_chrY_G0000514;transcript_name=HG002_chrY_T0001486;gene_name=TRAPPC2P7;ID=HG002_chrY_T0001486;Name=TRAPPC2P7
HG002_chrY	CAT	exon	19561763	19561848	.	-	.	source_transcript=ENST00000509650.1;source_transcript_name=TRAPPC2P7-201;source_gene=ENSG00000249606.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249606.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509650.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509650.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P7;alternative_source_transcripts=ENST00000509650.1,ENST00000509650.1;transcript_id=HG002_chrY_T0001486;gene_id=HG002_chrY_G0000514;Parent=HG002_chrY_T0001486;transcript_name=HG002_chrY_T0001486;gene_name=TRAPPC2P7;ID=exon:HG002_chrY_T0001486:0;Name=TRAPPC2P7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19561849	19562288	.	-	.	source_transcript=ENST00000509650.1;source_transcript_name=TRAPPC2P7-201;source_gene=ENSG00000249606.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249606.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509650.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509650.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P7;alternative_source_transcripts=ENST00000509650.1,ENST00000509650.1;transcript_id=HG002_chrY_T0001486;gene_id=HG002_chrY_G0000514;Parent=HG002_chrY_T0001486;transcript_name=HG002_chrY_T0001486;gene_name=TRAPPC2P7;ID=intron:HG002_chrY_T0001486:0;Name=TRAPPC2P7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19562289	19562433	.	-	.	source_transcript=ENST00000509650.1;source_transcript_name=TRAPPC2P7-201;source_gene=ENSG00000249606.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249606.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509650.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509650.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P7;alternative_source_transcripts=ENST00000509650.1,ENST00000509650.1;transcript_id=HG002_chrY_T0001486;gene_id=HG002_chrY_G0000514;Parent=HG002_chrY_T0001486;transcript_name=HG002_chrY_T0001486;gene_name=TRAPPC2P7;ID=exon:HG002_chrY_T0001486:1;Name=TRAPPC2P7;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19579849	19585071	.	+	.	source_gene_common_name=ENSG00000302211;source_gene=ENSG00000302211.1;gene_id=HG002_chrY_G0000515;gene_biotype=lncRNA;gene_name=ENSG00000302211;gene_sources=liftoff;ID=HG002_chrY_G0000515;Name=ENSG00000302211
HG002_chrY	CAT	transcript	19579849	19582183	1000	+	.	source_transcript=ENST00000785016.1;source_transcript_name=ENST00000785016;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785016.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG002_chrY_T0001487;gene_id=HG002_chrY_G0000515;Parent=HG002_chrY_G0000515;transcript_name=HG002_chrY_T0001487;gene_name=ENSG00000302211;ID=HG002_chrY_T0001487;Name=ENSG00000302211
HG002_chrY	CAT	exon	19579849	19579980	.	+	.	source_transcript=ENST00000785016.1;source_transcript_name=ENST00000785016;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG002_chrY_T0001487;gene_id=HG002_chrY_G0000515;Parent=HG002_chrY_T0001487;transcript_name=HG002_chrY_T0001487;gene_name=ENSG00000302211;ID=exon:HG002_chrY_T0001487:0;Name=ENSG00000302211;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19579981	19580454	.	+	.	source_transcript=ENST00000785016.1;source_transcript_name=ENST00000785016;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG002_chrY_T0001487;gene_id=HG002_chrY_G0000515;Parent=HG002_chrY_T0001487;transcript_name=HG002_chrY_T0001487;gene_name=ENSG00000302211;ID=intron:HG002_chrY_T0001487:0;Name=ENSG00000302211;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19580455	19580553	.	+	.	source_transcript=ENST00000785016.1;source_transcript_name=ENST00000785016;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG002_chrY_T0001487;gene_id=HG002_chrY_G0000515;Parent=HG002_chrY_T0001487;transcript_name=HG002_chrY_T0001487;gene_name=ENSG00000302211;ID=exon:HG002_chrY_T0001487:1;Name=ENSG00000302211;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19580554	19581607	.	+	.	source_transcript=ENST00000785016.1;source_transcript_name=ENST00000785016;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG002_chrY_T0001487;gene_id=HG002_chrY_G0000515;Parent=HG002_chrY_T0001487;transcript_name=HG002_chrY_T0001487;gene_name=ENSG00000302211;ID=intron:HG002_chrY_T0001487:1;Name=ENSG00000302211;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19581608	19582183	.	+	.	source_transcript=ENST00000785016.1;source_transcript_name=ENST00000785016;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG002_chrY_T0001487;gene_id=HG002_chrY_G0000515;Parent=HG002_chrY_T0001487;transcript_name=HG002_chrY_T0001487;gene_name=ENSG00000302211;ID=exon:HG002_chrY_T0001487:2;Name=ENSG00000302211;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19579925	19585071	1000	+	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG002_chrY_T0001488;gene_id=HG002_chrY_G0000515;Parent=HG002_chrY_G0000515;transcript_name=HG002_chrY_T0001488;gene_name=ENSG00000302211;ID=HG002_chrY_T0001488;Name=ENSG00000302211
HG002_chrY	CAT	exon	19579925	19579980	.	+	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG002_chrY_T0001488;gene_id=HG002_chrY_G0000515;Parent=HG002_chrY_T0001488;transcript_name=HG002_chrY_T0001488;gene_name=ENSG00000302211;ID=exon:HG002_chrY_T0001488:0;Name=ENSG00000302211;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19579981	19580454	.	+	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG002_chrY_T0001488;gene_id=HG002_chrY_G0000515;Parent=HG002_chrY_T0001488;transcript_name=HG002_chrY_T0001488;gene_name=ENSG00000302211;ID=intron:HG002_chrY_T0001488:0;Name=ENSG00000302211;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19580455	19580553	.	+	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG002_chrY_T0001488;gene_id=HG002_chrY_G0000515;Parent=HG002_chrY_T0001488;transcript_name=HG002_chrY_T0001488;gene_name=ENSG00000302211;ID=exon:HG002_chrY_T0001488:1;Name=ENSG00000302211;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19580554	19581607	.	+	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG002_chrY_T0001488;gene_id=HG002_chrY_G0000515;Parent=HG002_chrY_T0001488;transcript_name=HG002_chrY_T0001488;gene_name=ENSG00000302211;ID=intron:HG002_chrY_T0001488:1;Name=ENSG00000302211;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19581608	19581810	.	+	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG002_chrY_T0001488;gene_id=HG002_chrY_G0000515;Parent=HG002_chrY_T0001488;transcript_name=HG002_chrY_T0001488;gene_name=ENSG00000302211;ID=exon:HG002_chrY_T0001488:2;Name=ENSG00000302211;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19581811	19584832	.	+	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG002_chrY_T0001488;gene_id=HG002_chrY_G0000515;Parent=HG002_chrY_T0001488;transcript_name=HG002_chrY_T0001488;gene_name=ENSG00000302211;ID=intron:HG002_chrY_T0001488:2;Name=ENSG00000302211;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19584833	19585071	.	+	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG002_chrY_T0001488;gene_id=HG002_chrY_G0000515;Parent=HG002_chrY_T0001488;transcript_name=HG002_chrY_T0001488;gene_name=ENSG00000302211;ID=exon:HG002_chrY_T0001488:3;Name=ENSG00000302211;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19580271	19644334	.	+	.	source_gene_common_name=OFD1P6Y;source_gene=ENSG00000242153.8;gene_id=HG002_chrY_G0000516;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=OFD1P6Y;gene_sources=liftoff;ID=HG002_chrY_G0000516;Name=OFD1P6Y
HG002_chrY	CAT	transcript	19580271	19644334	1000	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_G0000516;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=HG002_chrY_T0001489;Name=OFD1P6Y
HG002_chrY	CAT	exon	19580271	19580282	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=exon:HG002_chrY_T0001489:0;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19580283	19580454	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=intron:HG002_chrY_T0001489:0;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19580455	19580553	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=exon:HG002_chrY_T0001489:1;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19580554	19581607	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=intron:HG002_chrY_T0001489:1;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19581608	19581810	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=exon:HG002_chrY_T0001489:2;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19581811	19584679	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=intron:HG002_chrY_T0001489:2;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19584680	19584747	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=exon:HG002_chrY_T0001489:3;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19584748	19584835	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=intron:HG002_chrY_T0001489:3;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19584836	19584866	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=exon:HG002_chrY_T0001489:4;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19584867	19597566	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=intron:HG002_chrY_T0001489:4;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19597567	19597671	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=exon:HG002_chrY_T0001489:5;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19597672	19599487	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=intron:HG002_chrY_T0001489:5;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19599488	19599624	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=exon:HG002_chrY_T0001489:6;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19599625	19604406	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=intron:HG002_chrY_T0001489:6;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19604407	19604578	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=exon:HG002_chrY_T0001489:7;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19604579	19617202	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=intron:HG002_chrY_T0001489:7;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19617203	19617309	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=exon:HG002_chrY_T0001489:8;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19617310	19619062	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=intron:HG002_chrY_T0001489:8;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19619063	19619161	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=exon:HG002_chrY_T0001489:9;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19619162	19620825	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=intron:HG002_chrY_T0001489:9;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19620826	19620899	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=exon:HG002_chrY_T0001489:10;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19620900	19622487	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=intron:HG002_chrY_T0001489:10;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19622488	19622623	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=exon:HG002_chrY_T0001489:11;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19622624	19623490	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=intron:HG002_chrY_T0001489:11;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19623491	19623620	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=exon:HG002_chrY_T0001489:12;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19623621	19624154	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=intron:HG002_chrY_T0001489:12;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19624155	19624266	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=exon:HG002_chrY_T0001489:13;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19624267	19626313	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=intron:HG002_chrY_T0001489:13;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19626314	19626941	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=exon:HG002_chrY_T0001489:14;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19626942	19627315	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=intron:HG002_chrY_T0001489:14;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19627316	19627427	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=exon:HG002_chrY_T0001489:15;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19627428	19637941	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=intron:HG002_chrY_T0001489:15;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19637942	19638042	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=exon:HG002_chrY_T0001489:16;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19638043	19639099	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=intron:HG002_chrY_T0001489:16;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19639100	19639236	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=exon:HG002_chrY_T0001489:17;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19639237	19642587	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=intron:HG002_chrY_T0001489:17;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19642588	19642738	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=exon:HG002_chrY_T0001489:18;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19642739	19643927	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=intron:HG002_chrY_T0001489:18;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19643928	19643994	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=exon:HG002_chrY_T0001489:19;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19643995	19644291	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=intron:HG002_chrY_T0001489:19;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19644292	19644334	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=HG002_chrY_T0001489;gene_id=HG002_chrY_G0000516;Parent=HG002_chrY_T0001489;transcript_name=HG002_chrY_T0001489;gene_name=OFD1P6Y;ID=exon:HG002_chrY_T0001489:20;Name=OFD1P6Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19597556	19630371	.	-	.	source_gene_common_name=ENSG00000295232;source_gene=ENSG00000295232.1;alternative_source_transcripts=ENST00000728750.1,ENST00000728750.1;gene_id=HG002_chrY_G0000517;gene_biotype=lncRNA;gene_name=ENSG00000295232;gene_sources=liftoff;ID=HG002_chrY_G0000517;Name=ENSG00000295232
HG002_chrY	CAT	transcript	19597556	19630371	1000	-	.	source_transcript=ENST00000728750.1;source_transcript_name=ENST00000728750;source_gene=ENSG00000295232.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295232.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728750.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295232;alternative_source_transcripts=ENST00000728750.1,ENST00000728750.1;transcript_id=HG002_chrY_T0001490;gene_id=HG002_chrY_G0000517;Parent=HG002_chrY_G0000517;transcript_name=HG002_chrY_T0001490;gene_name=ENSG00000295232;ID=HG002_chrY_T0001490;Name=ENSG00000295232
HG002_chrY	CAT	exon	19597556	19597782	.	-	.	source_transcript=ENST00000728750.1;source_transcript_name=ENST00000728750;source_gene=ENSG00000295232.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295232.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728750.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295232;alternative_source_transcripts=ENST00000728750.1,ENST00000728750.1;transcript_id=HG002_chrY_T0001490;gene_id=HG002_chrY_G0000517;Parent=HG002_chrY_T0001490;transcript_name=HG002_chrY_T0001490;gene_name=ENSG00000295232;ID=exon:HG002_chrY_T0001490:0;Name=ENSG00000295232;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19597783	19606738	.	-	.	source_transcript=ENST00000728750.1;source_transcript_name=ENST00000728750;source_gene=ENSG00000295232.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295232.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728750.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295232;alternative_source_transcripts=ENST00000728750.1,ENST00000728750.1;transcript_id=HG002_chrY_T0001490;gene_id=HG002_chrY_G0000517;Parent=HG002_chrY_T0001490;transcript_name=HG002_chrY_T0001490;gene_name=ENSG00000295232;ID=intron:HG002_chrY_T0001490:0;Name=ENSG00000295232;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19606739	19606829	.	-	.	source_transcript=ENST00000728750.1;source_transcript_name=ENST00000728750;source_gene=ENSG00000295232.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295232.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728750.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295232;alternative_source_transcripts=ENST00000728750.1,ENST00000728750.1;transcript_id=HG002_chrY_T0001490;gene_id=HG002_chrY_G0000517;Parent=HG002_chrY_T0001490;transcript_name=HG002_chrY_T0001490;gene_name=ENSG00000295232;ID=exon:HG002_chrY_T0001490:1;Name=ENSG00000295232;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19606830	19630257	.	-	.	source_transcript=ENST00000728750.1;source_transcript_name=ENST00000728750;source_gene=ENSG00000295232.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295232.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728750.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295232;alternative_source_transcripts=ENST00000728750.1,ENST00000728750.1;transcript_id=HG002_chrY_T0001490;gene_id=HG002_chrY_G0000517;Parent=HG002_chrY_T0001490;transcript_name=HG002_chrY_T0001490;gene_name=ENSG00000295232;ID=intron:HG002_chrY_T0001490:1;Name=ENSG00000295232;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19630258	19630371	.	-	.	source_transcript=ENST00000728750.1;source_transcript_name=ENST00000728750;source_gene=ENSG00000295232.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295232.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728750.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295232;alternative_source_transcripts=ENST00000728750.1,ENST00000728750.1;transcript_id=HG002_chrY_T0001490;gene_id=HG002_chrY_G0000517;Parent=HG002_chrY_T0001490;transcript_name=HG002_chrY_T0001490;gene_name=ENSG00000295232;ID=exon:HG002_chrY_T0001490:2;Name=ENSG00000295232;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19636127	19645442	.	+	.	source_gene_common_name=TTTY9A;source_gene=ENSG00000290716.1;gene_id=HG002_chrY_G0000518;gene_biotype=lncRNA;gene_name=TTTY9A;gene_sources=liftoff;ID=HG002_chrY_G0000518;Name=TTTY9A
HG002_chrY	CAT	transcript	19636127	19645442	1000	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=HG002_chrY_T0001491;gene_id=HG002_chrY_G0000518;Parent=HG002_chrY_G0000518;transcript_name=HG002_chrY_T0001491;gene_name=TTTY9A;ID=HG002_chrY_T0001491;Name=TTTY9A
HG002_chrY	CAT	exon	19636127	19636268	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=HG002_chrY_T0001491;gene_id=HG002_chrY_G0000518;Parent=HG002_chrY_T0001491;transcript_name=HG002_chrY_T0001491;gene_name=TTTY9A;ID=exon:HG002_chrY_T0001491:0;Name=TTTY9A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19636269	19637941	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=HG002_chrY_T0001491;gene_id=HG002_chrY_G0000518;Parent=HG002_chrY_T0001491;transcript_name=HG002_chrY_T0001491;gene_name=TTTY9A;ID=intron:HG002_chrY_T0001491:0;Name=TTTY9A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19637942	19638042	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=HG002_chrY_T0001491;gene_id=HG002_chrY_G0000518;Parent=HG002_chrY_T0001491;transcript_name=HG002_chrY_T0001491;gene_name=TTTY9A;ID=exon:HG002_chrY_T0001491:1;Name=TTTY9A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19638043	19638403	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=HG002_chrY_T0001491;gene_id=HG002_chrY_G0000518;Parent=HG002_chrY_T0001491;transcript_name=HG002_chrY_T0001491;gene_name=TTTY9A;ID=intron:HG002_chrY_T0001491:1;Name=TTTY9A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19638404	19638517	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=HG002_chrY_T0001491;gene_id=HG002_chrY_G0000518;Parent=HG002_chrY_T0001491;transcript_name=HG002_chrY_T0001491;gene_name=TTTY9A;ID=exon:HG002_chrY_T0001491:2;Name=TTTY9A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19638518	19639099	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=HG002_chrY_T0001491;gene_id=HG002_chrY_G0000518;Parent=HG002_chrY_T0001491;transcript_name=HG002_chrY_T0001491;gene_name=TTTY9A;ID=intron:HG002_chrY_T0001491:2;Name=TTTY9A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19639100	19639236	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=HG002_chrY_T0001491;gene_id=HG002_chrY_G0000518;Parent=HG002_chrY_T0001491;transcript_name=HG002_chrY_T0001491;gene_name=TTTY9A;ID=exon:HG002_chrY_T0001491:3;Name=TTTY9A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19639237	19644299	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=HG002_chrY_T0001491;gene_id=HG002_chrY_G0000518;Parent=HG002_chrY_T0001491;transcript_name=HG002_chrY_T0001491;gene_name=TTTY9A;ID=intron:HG002_chrY_T0001491:3;Name=TTTY9A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19644300	19645442	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=HG002_chrY_T0001491;gene_id=HG002_chrY_G0000518;Parent=HG002_chrY_T0001491;transcript_name=HG002_chrY_T0001491;gene_name=TTTY9A;ID=exon:HG002_chrY_T0001491:4;Name=TTTY9A;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19637685	19679969	.	-	.	source_gene_common_name=HSFY2;source_gene=ENSG00000169953.12;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;gene_id=HG002_chrY_G0000519;gene_biotype=protein_coding;gene_name=HSFY2;gene_sources=liftoff;ID=HG002_chrY_G0000519;Name=HSFY2
HG002_chrY	CAT	transcript	19637685	19679949	100	-	.	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;transcript_id=HG002_chrY_T0001492;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_G0000519;transcript_name=HG002_chrY_T0001492;gene_name=HSFY2;ID=HG002_chrY_T0001492;Name=HSFY2
HG002_chrY	CAT	exon	19637685	19638112	.	-	.	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;transcript_id=HG002_chrY_T0001492;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001492;transcript_name=HG002_chrY_T0001492;gene_name=HSFY2;ID=exon:HG002_chrY_T0001492:0;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	19638014	19638112	.	-	0	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;transcript_id=HG002_chrY_T0001492;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001492;transcript_name=HG002_chrY_T0001492;gene_name=HSFY2;ID=CDS:HG002_chrY_T0001492:0;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	19638014	19638016	.	-	0	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;transcript_id=HG002_chrY_T0001492;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001492;transcript_name=HG002_chrY_T0001492;gene_name=HSFY2;ID=stop_codon:HG002_chrY_T0001492;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19638113	19679339	.	-	.	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;transcript_id=HG002_chrY_T0001492;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001492;transcript_name=HG002_chrY_T0001492;gene_name=HSFY2;ID=intron:HG002_chrY_T0001492:0;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19679340	19679949	.	-	.	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;transcript_id=HG002_chrY_T0001492;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001492;transcript_name=HG002_chrY_T0001492;gene_name=HSFY2;ID=exon:HG002_chrY_T0001492:1;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	19679340	19679852	.	-	0	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;transcript_id=HG002_chrY_T0001492;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001492;transcript_name=HG002_chrY_T0001492;gene_name=HSFY2;ID=CDS:HG002_chrY_T0001492:1;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	19679850	19679852	.	-	0	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;transcript_id=HG002_chrY_T0001492;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001492;transcript_name=HG002_chrY_T0001492;gene_name=HSFY2;ID=start_codon:HG002_chrY_T0001492;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19637685	19679949	1000	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=HG002_chrY_T0001493;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_G0000519;transcript_name=HG002_chrY_T0001493;gene_name=HSFY2;ID=HG002_chrY_T0001493;Name=HSFY2
HG002_chrY	CAT	exon	19637685	19638112	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=HG002_chrY_T0001493;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001493;transcript_name=HG002_chrY_T0001493;gene_name=HSFY2;ID=exon:HG002_chrY_T0001493:0;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19638113	19643889	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=HG002_chrY_T0001493;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001493;transcript_name=HG002_chrY_T0001493;gene_name=HSFY2;ID=intron:HG002_chrY_T0001493:0;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19643890	19643975	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=HG002_chrY_T0001493;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001493;transcript_name=HG002_chrY_T0001493;gene_name=HSFY2;ID=exon:HG002_chrY_T0001493:1;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19643976	19674566	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=HG002_chrY_T0001493;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001493;transcript_name=HG002_chrY_T0001493;gene_name=HSFY2;ID=intron:HG002_chrY_T0001493:1;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19674567	19674721	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=HG002_chrY_T0001493;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001493;transcript_name=HG002_chrY_T0001493;gene_name=HSFY2;ID=exon:HG002_chrY_T0001493:2;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19674722	19675768	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=HG002_chrY_T0001493;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001493;transcript_name=HG002_chrY_T0001493;gene_name=HSFY2;ID=intron:HG002_chrY_T0001493:2;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19675769	19675855	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=HG002_chrY_T0001493;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001493;transcript_name=HG002_chrY_T0001493;gene_name=HSFY2;ID=exon:HG002_chrY_T0001493:3;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19675856	19676416	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=HG002_chrY_T0001493;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001493;transcript_name=HG002_chrY_T0001493;gene_name=HSFY2;ID=intron:HG002_chrY_T0001493:3;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19676417	19676526	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=HG002_chrY_T0001493;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001493;transcript_name=HG002_chrY_T0001493;gene_name=HSFY2;ID=exon:HG002_chrY_T0001493:4;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19676527	19679339	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=HG002_chrY_T0001493;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001493;transcript_name=HG002_chrY_T0001493;gene_name=HSFY2;ID=intron:HG002_chrY_T0001493:4;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19679340	19679949	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=HG002_chrY_T0001493;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001493;transcript_name=HG002_chrY_T0001493;gene_name=HSFY2;ID=exon:HG002_chrY_T0001493:5;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19675157	19679920	100	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=HG002_chrY_T0001495;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_G0000519;transcript_name=HG002_chrY_T0001495;gene_name=HSFY2;ID=HG002_chrY_T0001495;Name=HSFY2
HG002_chrY	CAT	exon	19675157	19675855	.	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=HG002_chrY_T0001495;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001495;transcript_name=HG002_chrY_T0001495;gene_name=HSFY2;ID=exon:HG002_chrY_T0001495:0;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	19675834	19675855	.	-	1	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=HG002_chrY_T0001495;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001495;transcript_name=HG002_chrY_T0001495;gene_name=HSFY2;ID=CDS:HG002_chrY_T0001495:0;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	19675834	19675836	.	-	0	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=HG002_chrY_T0001495;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001495;transcript_name=HG002_chrY_T0001495;gene_name=HSFY2;ID=stop_codon:HG002_chrY_T0001495;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19675856	19676416	.	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=HG002_chrY_T0001495;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001495;transcript_name=HG002_chrY_T0001495;gene_name=HSFY2;ID=intron:HG002_chrY_T0001495:0;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19676417	19676526	.	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=HG002_chrY_T0001495;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001495;transcript_name=HG002_chrY_T0001495;gene_name=HSFY2;ID=exon:HG002_chrY_T0001495:1;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	19676417	19676526	.	-	0	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=HG002_chrY_T0001495;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001495;transcript_name=HG002_chrY_T0001495;gene_name=HSFY2;ID=CDS:HG002_chrY_T0001495:1;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19676527	19679339	.	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=HG002_chrY_T0001495;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001495;transcript_name=HG002_chrY_T0001495;gene_name=HSFY2;ID=intron:HG002_chrY_T0001495:1;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19679340	19679920	.	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=HG002_chrY_T0001495;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001495;transcript_name=HG002_chrY_T0001495;gene_name=HSFY2;ID=exon:HG002_chrY_T0001495:2;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	19679340	19679852	.	-	0	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=HG002_chrY_T0001495;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001495;transcript_name=HG002_chrY_T0001495;gene_name=HSFY2;ID=CDS:HG002_chrY_T0001495:2;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	19679850	19679852	.	-	0	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=HG002_chrY_T0001495;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001495;transcript_name=HG002_chrY_T0001495;gene_name=HSFY2;ID=start_codon:HG002_chrY_T0001495;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19678048	19679969	100	-	.	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3,ENST00000304790.3;transcript_id=HG002_chrY_T0001496;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_G0000519;transcript_name=HG002_chrY_T0001496;gene_name=HSFY2;ID=HG002_chrY_T0001496;Name=HSFY2
HG002_chrY	CAT	exon	19678048	19678861	.	-	.	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3,ENST00000304790.3;transcript_id=HG002_chrY_T0001496;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001496;transcript_name=HG002_chrY_T0001496;gene_name=HSFY2;ID=exon:HG002_chrY_T0001496:0;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	19678169	19678861	.	-	0	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3,ENST00000304790.3;transcript_id=HG002_chrY_T0001496;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001496;transcript_name=HG002_chrY_T0001496;gene_name=HSFY2;ID=CDS:HG002_chrY_T0001496:0;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	19678169	19678171	.	-	0	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3,ENST00000304790.3;transcript_id=HG002_chrY_T0001496;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001496;transcript_name=HG002_chrY_T0001496;gene_name=HSFY2;ID=stop_codon:HG002_chrY_T0001496;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19678862	19679339	.	-	.	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3,ENST00000304790.3;transcript_id=HG002_chrY_T0001496;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001496;transcript_name=HG002_chrY_T0001496;gene_name=HSFY2;ID=intron:HG002_chrY_T0001496:0;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19679340	19679969	.	-	.	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3,ENST00000304790.3;transcript_id=HG002_chrY_T0001496;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001496;transcript_name=HG002_chrY_T0001496;gene_name=HSFY2;ID=exon:HG002_chrY_T0001496:1;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	19679340	19679852	.	-	0	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3,ENST00000304790.3;transcript_id=HG002_chrY_T0001496;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001496;transcript_name=HG002_chrY_T0001496;gene_name=HSFY2;ID=CDS:HG002_chrY_T0001496:1;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	19679850	19679852	.	-	0	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3,ENST00000304790.3;transcript_id=HG002_chrY_T0001496;gene_id=HG002_chrY_G0000519;Parent=HG002_chrY_T0001496;transcript_name=HG002_chrY_T0001496;gene_name=HSFY2;ID=start_codon:HG002_chrY_T0001496;Name=HSFY2;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19648088	19648231	.	-	.	source_gene_common_name=GPM6BP2;source_gene=ENSG00000236429.1;alternative_source_transcripts=ENST00000432046.1,ENST00000432046.1;gene_id=HG002_chrY_G0000520;gene_biotype=unprocessed_pseudogene;gene_name=GPM6BP2;gene_sources=liftoff;ID=HG002_chrY_G0000520;Name=GPM6BP2
HG002_chrY	CAT	transcript	19648088	19648231	1000	-	.	source_transcript=ENST00000432046.1;source_transcript_name=GPM6BP2-201;source_gene=ENSG00000236429.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236429.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432046.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPM6BP2;alternative_source_transcripts=ENST00000432046.1,ENST00000432046.1;transcript_id=HG002_chrY_T0001494;gene_id=HG002_chrY_G0000520;Parent=HG002_chrY_G0000520;transcript_name=HG002_chrY_T0001494;gene_name=GPM6BP2;ID=HG002_chrY_T0001494;Name=GPM6BP2
HG002_chrY	CAT	exon	19648088	19648231	.	-	.	source_transcript=ENST00000432046.1;source_transcript_name=GPM6BP2-201;source_gene=ENSG00000236429.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236429.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432046.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPM6BP2;alternative_source_transcripts=ENST00000432046.1,ENST00000432046.1;transcript_id=HG002_chrY_T0001494;gene_id=HG002_chrY_G0000520;Parent=HG002_chrY_T0001494;transcript_name=HG002_chrY_T0001494;gene_name=GPM6BP2;ID=exon:HG002_chrY_T0001494:0;Name=GPM6BP2;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19678940	19983811	.	-	.	source_gene_common_name=TTTY14;source_gene=ENSG00000176728.11;gene_id=HG002_chrY_G0000521;gene_biotype=lncRNA;gene_name=TTTY14;gene_sources=liftoff;ID=HG002_chrY_G0000521;Name=TTTY14
HG002_chrY	CAT	transcript	19678940	19725739	1000	-	.	source_transcript=ENST00000505047.2;source_transcript_name=TTTY14-206;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000505047.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000505047.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001497;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001497;gene_name=TTTY14;ID=HG002_chrY_T0001497;Name=TTTY14
HG002_chrY	CAT	exon	19678940	19679607	.	-	.	source_transcript=ENST00000505047.2;source_transcript_name=TTTY14-206;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000505047.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000505047.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001497;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001497;transcript_name=HG002_chrY_T0001497;gene_name=TTTY14;ID=exon:HG002_chrY_T0001497:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19679608	19696045	.	-	.	source_transcript=ENST00000505047.2;source_transcript_name=TTTY14-206;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000505047.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000505047.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001497;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001497;transcript_name=HG002_chrY_T0001497;gene_name=TTTY14;ID=intron:HG002_chrY_T0001497:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19696046	19696154	.	-	.	source_transcript=ENST00000505047.2;source_transcript_name=TTTY14-206;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000505047.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000505047.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001497;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001497;transcript_name=HG002_chrY_T0001497;gene_name=TTTY14;ID=exon:HG002_chrY_T0001497:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19696155	19696804	.	-	.	source_transcript=ENST00000505047.2;source_transcript_name=TTTY14-206;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000505047.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000505047.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001497;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001497;transcript_name=HG002_chrY_T0001497;gene_name=TTTY14;ID=intron:HG002_chrY_T0001497:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19696805	19697002	.	-	.	source_transcript=ENST00000505047.2;source_transcript_name=TTTY14-206;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000505047.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000505047.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001497;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001497;transcript_name=HG002_chrY_T0001497;gene_name=TTTY14;ID=exon:HG002_chrY_T0001497:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19697003	19725587	.	-	.	source_transcript=ENST00000505047.2;source_transcript_name=TTTY14-206;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000505047.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000505047.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001497;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001497;transcript_name=HG002_chrY_T0001497;gene_name=TTTY14;ID=intron:HG002_chrY_T0001497:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19725588	19725739	.	-	.	source_transcript=ENST00000505047.2;source_transcript_name=TTTY14-206;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000505047.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000505047.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001497;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001497;transcript_name=HG002_chrY_T0001497;gene_name=TTTY14;ID=exon:HG002_chrY_T0001497:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19678977	19983478	1000	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001498;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001498;gene_name=TTTY14;ID=HG002_chrY_T0001498;Name=TTTY14
HG002_chrY	CAT	exon	19678977	19679607	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001498;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001498;transcript_name=HG002_chrY_T0001498;gene_name=TTTY14;ID=exon:HG002_chrY_T0001498:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19679608	19696045	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001498;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001498;transcript_name=HG002_chrY_T0001498;gene_name=TTTY14;ID=intron:HG002_chrY_T0001498:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19696046	19696154	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001498;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001498;transcript_name=HG002_chrY_T0001498;gene_name=TTTY14;ID=exon:HG002_chrY_T0001498:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19696155	19696804	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001498;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001498;transcript_name=HG002_chrY_T0001498;gene_name=TTTY14;ID=intron:HG002_chrY_T0001498:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19696805	19697002	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001498;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001498;transcript_name=HG002_chrY_T0001498;gene_name=TTTY14;ID=exon:HG002_chrY_T0001498:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19697003	19725587	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001498;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001498;transcript_name=HG002_chrY_T0001498;gene_name=TTTY14;ID=intron:HG002_chrY_T0001498:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19725588	19726019	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001498;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001498;transcript_name=HG002_chrY_T0001498;gene_name=TTTY14;ID=exon:HG002_chrY_T0001498:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19726020	19734824	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001498;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001498;transcript_name=HG002_chrY_T0001498;gene_name=TTTY14;ID=intron:HG002_chrY_T0001498:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19734825	19734959	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001498;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001498;transcript_name=HG002_chrY_T0001498;gene_name=TTTY14;ID=exon:HG002_chrY_T0001498:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19734960	19736675	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001498;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001498;transcript_name=HG002_chrY_T0001498;gene_name=TTTY14;ID=intron:HG002_chrY_T0001498:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19736676	19736879	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001498;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001498;transcript_name=HG002_chrY_T0001498;gene_name=TTTY14;ID=exon:HG002_chrY_T0001498:5;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19736880	19739241	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001498;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001498;transcript_name=HG002_chrY_T0001498;gene_name=TTTY14;ID=intron:HG002_chrY_T0001498:5;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19739242	19739343	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001498;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001498;transcript_name=HG002_chrY_T0001498;gene_name=TTTY14;ID=exon:HG002_chrY_T0001498:6;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19739344	19739996	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001498;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001498;transcript_name=HG002_chrY_T0001498;gene_name=TTTY14;ID=intron:HG002_chrY_T0001498:6;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19739997	19742648	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001498;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001498;transcript_name=HG002_chrY_T0001498;gene_name=TTTY14;ID=exon:HG002_chrY_T0001498:7;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19742649	19744990	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001498;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001498;transcript_name=HG002_chrY_T0001498;gene_name=TTTY14;ID=intron:HG002_chrY_T0001498:7;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19744991	19745111	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001498;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001498;transcript_name=HG002_chrY_T0001498;gene_name=TTTY14;ID=exon:HG002_chrY_T0001498:8;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19745112	19745420	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001498;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001498;transcript_name=HG002_chrY_T0001498;gene_name=TTTY14;ID=intron:HG002_chrY_T0001498:8;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19745421	19745552	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001498;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001498;transcript_name=HG002_chrY_T0001498;gene_name=TTTY14;ID=exon:HG002_chrY_T0001498:9;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19745553	19783307	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001498;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001498;transcript_name=HG002_chrY_T0001498;gene_name=TTTY14;ID=intron:HG002_chrY_T0001498:9;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19783308	19783445	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001498;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001498;transcript_name=HG002_chrY_T0001498;gene_name=TTTY14;ID=exon:HG002_chrY_T0001498:10;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19783446	19947628	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001498;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001498;transcript_name=HG002_chrY_T0001498;gene_name=TTTY14;ID=intron:HG002_chrY_T0001498:10;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19947629	19949605	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001498;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001498;transcript_name=HG002_chrY_T0001498;gene_name=TTTY14;ID=exon:HG002_chrY_T0001498:11;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19949606	19950920	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001498;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001498;transcript_name=HG002_chrY_T0001498;gene_name=TTTY14;ID=intron:HG002_chrY_T0001498:11;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19950921	19950954	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001498;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001498;transcript_name=HG002_chrY_T0001498;gene_name=TTTY14;ID=exon:HG002_chrY_T0001498:12;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19950955	19951500	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001498;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001498;transcript_name=HG002_chrY_T0001498;gene_name=TTTY14;ID=intron:HG002_chrY_T0001498:12;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19951501	19951550	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001498;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001498;transcript_name=HG002_chrY_T0001498;gene_name=TTTY14;ID=exon:HG002_chrY_T0001498:13;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19951551	19983300	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001498;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001498;transcript_name=HG002_chrY_T0001498;gene_name=TTTY14;ID=intron:HG002_chrY_T0001498:13;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19983301	19983478	.	-	.	source_transcript=ENST00000651734.1;source_transcript_name=TTTY14-214;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001498;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001498;transcript_name=HG002_chrY_T0001498;gene_name=TTTY14;ID=exon:HG002_chrY_T0001498:14;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19679181	19983630	1000	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001499;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001499;gene_name=TTTY14;ID=HG002_chrY_T0001499;Name=TTTY14
HG002_chrY	CAT	exon	19679181	19679607	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001499;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001499;transcript_name=HG002_chrY_T0001499;gene_name=TTTY14;ID=exon:HG002_chrY_T0001499:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19679608	19696804	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001499;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001499;transcript_name=HG002_chrY_T0001499;gene_name=TTTY14;ID=intron:HG002_chrY_T0001499:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19696805	19697002	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001499;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001499;transcript_name=HG002_chrY_T0001499;gene_name=TTTY14;ID=exon:HG002_chrY_T0001499:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19697003	19719848	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001499;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001499;transcript_name=HG002_chrY_T0001499;gene_name=TTTY14;ID=intron:HG002_chrY_T0001499:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19719849	19719976	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001499;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001499;transcript_name=HG002_chrY_T0001499;gene_name=TTTY14;ID=exon:HG002_chrY_T0001499:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19719977	19725587	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001499;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001499;transcript_name=HG002_chrY_T0001499;gene_name=TTTY14;ID=intron:HG002_chrY_T0001499:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19725588	19726019	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001499;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001499;transcript_name=HG002_chrY_T0001499;gene_name=TTTY14;ID=exon:HG002_chrY_T0001499:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19726020	19734824	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001499;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001499;transcript_name=HG002_chrY_T0001499;gene_name=TTTY14;ID=intron:HG002_chrY_T0001499:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19734825	19734959	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001499;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001499;transcript_name=HG002_chrY_T0001499;gene_name=TTTY14;ID=exon:HG002_chrY_T0001499:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19734960	19736675	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001499;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001499;transcript_name=HG002_chrY_T0001499;gene_name=TTTY14;ID=intron:HG002_chrY_T0001499:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19736676	19736879	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001499;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001499;transcript_name=HG002_chrY_T0001499;gene_name=TTTY14;ID=exon:HG002_chrY_T0001499:5;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19736880	19778683	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001499;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001499;transcript_name=HG002_chrY_T0001499;gene_name=TTTY14;ID=intron:HG002_chrY_T0001499:5;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19778684	19779074	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001499;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001499;transcript_name=HG002_chrY_T0001499;gene_name=TTTY14;ID=exon:HG002_chrY_T0001499:6;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19779075	19783307	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001499;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001499;transcript_name=HG002_chrY_T0001499;gene_name=TTTY14;ID=intron:HG002_chrY_T0001499:6;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19783308	19783445	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001499;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001499;transcript_name=HG002_chrY_T0001499;gene_name=TTTY14;ID=exon:HG002_chrY_T0001499:7;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19783446	19784444	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001499;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001499;transcript_name=HG002_chrY_T0001499;gene_name=TTTY14;ID=intron:HG002_chrY_T0001499:7;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19784445	19786071	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001499;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001499;transcript_name=HG002_chrY_T0001499;gene_name=TTTY14;ID=exon:HG002_chrY_T0001499:8;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19786072	19953981	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001499;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001499;transcript_name=HG002_chrY_T0001499;gene_name=TTTY14;ID=intron:HG002_chrY_T0001499:8;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19953982	19954066	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001499;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001499;transcript_name=HG002_chrY_T0001499;gene_name=TTTY14;ID=exon:HG002_chrY_T0001499:9;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19954067	19974979	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001499;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001499;transcript_name=HG002_chrY_T0001499;gene_name=TTTY14;ID=intron:HG002_chrY_T0001499:9;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19974980	19975054	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001499;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001499;transcript_name=HG002_chrY_T0001499;gene_name=TTTY14;ID=exon:HG002_chrY_T0001499:10;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19975055	19983523	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001499;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001499;transcript_name=HG002_chrY_T0001499;gene_name=TTTY14;ID=intron:HG002_chrY_T0001499:10;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19983524	19983630	.	-	.	source_transcript=ENST00000651886.1;source_transcript_name=TTTY14-215;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651886.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651886.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001499;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001499;transcript_name=HG002_chrY_T0001499;gene_name=TTTY14;ID=exon:HG002_chrY_T0001499:11;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19679181	19983330	1000	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001500;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001500;gene_name=TTTY14;ID=HG002_chrY_T0001500;Name=TTTY14
HG002_chrY	CAT	exon	19679181	19679607	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001500;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001500;transcript_name=HG002_chrY_T0001500;gene_name=TTTY14;ID=exon:HG002_chrY_T0001500:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19679608	19696804	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001500;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001500;transcript_name=HG002_chrY_T0001500;gene_name=TTTY14;ID=intron:HG002_chrY_T0001500:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19696805	19697002	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001500;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001500;transcript_name=HG002_chrY_T0001500;gene_name=TTTY14;ID=exon:HG002_chrY_T0001500:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19697003	19719848	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001500;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001500;transcript_name=HG002_chrY_T0001500;gene_name=TTTY14;ID=intron:HG002_chrY_T0001500:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19719849	19719976	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001500;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001500;transcript_name=HG002_chrY_T0001500;gene_name=TTTY14;ID=exon:HG002_chrY_T0001500:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19719977	19725587	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001500;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001500;transcript_name=HG002_chrY_T0001500;gene_name=TTTY14;ID=intron:HG002_chrY_T0001500:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19725588	19726019	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001500;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001500;transcript_name=HG002_chrY_T0001500;gene_name=TTTY14;ID=exon:HG002_chrY_T0001500:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19726020	19734824	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001500;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001500;transcript_name=HG002_chrY_T0001500;gene_name=TTTY14;ID=intron:HG002_chrY_T0001500:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19734825	19734959	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001500;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001500;transcript_name=HG002_chrY_T0001500;gene_name=TTTY14;ID=exon:HG002_chrY_T0001500:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19734960	19736675	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001500;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001500;transcript_name=HG002_chrY_T0001500;gene_name=TTTY14;ID=intron:HG002_chrY_T0001500:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19736676	19736879	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001500;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001500;transcript_name=HG002_chrY_T0001500;gene_name=TTTY14;ID=exon:HG002_chrY_T0001500:5;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19736880	19778683	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001500;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001500;transcript_name=HG002_chrY_T0001500;gene_name=TTTY14;ID=intron:HG002_chrY_T0001500:5;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19778684	19779074	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001500;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001500;transcript_name=HG002_chrY_T0001500;gene_name=TTTY14;ID=exon:HG002_chrY_T0001500:6;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19779075	19783307	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001500;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001500;transcript_name=HG002_chrY_T0001500;gene_name=TTTY14;ID=intron:HG002_chrY_T0001500:6;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19783308	19783445	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001500;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001500;transcript_name=HG002_chrY_T0001500;gene_name=TTTY14;ID=exon:HG002_chrY_T0001500:7;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19783446	19784444	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001500;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001500;transcript_name=HG002_chrY_T0001500;gene_name=TTTY14;ID=intron:HG002_chrY_T0001500:7;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19784445	19786071	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001500;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001500;transcript_name=HG002_chrY_T0001500;gene_name=TTTY14;ID=exon:HG002_chrY_T0001500:8;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19786072	19953981	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001500;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001500;transcript_name=HG002_chrY_T0001500;gene_name=TTTY14;ID=intron:HG002_chrY_T0001500:8;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19953982	19954066	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001500;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001500;transcript_name=HG002_chrY_T0001500;gene_name=TTTY14;ID=exon:HG002_chrY_T0001500:9;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19954067	19955031	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001500;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001500;transcript_name=HG002_chrY_T0001500;gene_name=TTTY14;ID=intron:HG002_chrY_T0001500:9;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19955032	19955171	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001500;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001500;transcript_name=HG002_chrY_T0001500;gene_name=TTTY14;ID=exon:HG002_chrY_T0001500:10;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19955172	19983300	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001500;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001500;transcript_name=HG002_chrY_T0001500;gene_name=TTTY14;ID=intron:HG002_chrY_T0001500:10;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19983301	19983330	.	-	.	source_transcript=ENST00000651396.1;source_transcript_name=TTTY14-213;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651396.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651396.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001500;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001500;transcript_name=HG002_chrY_T0001500;gene_name=TTTY14;ID=exon:HG002_chrY_T0001500:11;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19679181	19917599	1000	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001501;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001501;gene_name=TTTY14;ID=HG002_chrY_T0001501;Name=TTTY14
HG002_chrY	CAT	exon	19679181	19679607	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001501;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001501;transcript_name=HG002_chrY_T0001501;gene_name=TTTY14;ID=exon:HG002_chrY_T0001501:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19679608	19696804	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001501;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001501;transcript_name=HG002_chrY_T0001501;gene_name=TTTY14;ID=intron:HG002_chrY_T0001501:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19696805	19697002	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001501;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001501;transcript_name=HG002_chrY_T0001501;gene_name=TTTY14;ID=exon:HG002_chrY_T0001501:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19697003	19719848	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001501;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001501;transcript_name=HG002_chrY_T0001501;gene_name=TTTY14;ID=intron:HG002_chrY_T0001501:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19719849	19719976	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001501;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001501;transcript_name=HG002_chrY_T0001501;gene_name=TTTY14;ID=exon:HG002_chrY_T0001501:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19719977	19725587	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001501;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001501;transcript_name=HG002_chrY_T0001501;gene_name=TTTY14;ID=intron:HG002_chrY_T0001501:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19725588	19726019	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001501;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001501;transcript_name=HG002_chrY_T0001501;gene_name=TTTY14;ID=exon:HG002_chrY_T0001501:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19726020	19734824	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001501;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001501;transcript_name=HG002_chrY_T0001501;gene_name=TTTY14;ID=intron:HG002_chrY_T0001501:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19734825	19734959	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001501;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001501;transcript_name=HG002_chrY_T0001501;gene_name=TTTY14;ID=exon:HG002_chrY_T0001501:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19734960	19736675	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001501;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001501;transcript_name=HG002_chrY_T0001501;gene_name=TTTY14;ID=intron:HG002_chrY_T0001501:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19736676	19736879	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001501;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001501;transcript_name=HG002_chrY_T0001501;gene_name=TTTY14;ID=exon:HG002_chrY_T0001501:5;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19736880	19778683	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001501;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001501;transcript_name=HG002_chrY_T0001501;gene_name=TTTY14;ID=intron:HG002_chrY_T0001501:5;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19778684	19779074	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001501;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001501;transcript_name=HG002_chrY_T0001501;gene_name=TTTY14;ID=exon:HG002_chrY_T0001501:6;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19779075	19783307	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001501;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001501;transcript_name=HG002_chrY_T0001501;gene_name=TTTY14;ID=intron:HG002_chrY_T0001501:6;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19783308	19783445	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001501;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001501;transcript_name=HG002_chrY_T0001501;gene_name=TTTY14;ID=exon:HG002_chrY_T0001501:7;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19783446	19833332	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001501;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001501;transcript_name=HG002_chrY_T0001501;gene_name=TTTY14;ID=intron:HG002_chrY_T0001501:7;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19833333	19834630	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001501;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001501;transcript_name=HG002_chrY_T0001501;gene_name=TTTY14;ID=exon:HG002_chrY_T0001501:8;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19834631	19838999	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001501;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001501;transcript_name=HG002_chrY_T0001501;gene_name=TTTY14;ID=intron:HG002_chrY_T0001501:8;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19839000	19839098	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001501;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001501;transcript_name=HG002_chrY_T0001501;gene_name=TTTY14;ID=exon:HG002_chrY_T0001501:9;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839099	19917521	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001501;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001501;transcript_name=HG002_chrY_T0001501;gene_name=TTTY14;ID=intron:HG002_chrY_T0001501:9;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19917522	19917599	.	-	.	source_transcript=ENST00000650923.1;source_transcript_name=TTTY14-209;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650923.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650923.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001501;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001501;transcript_name=HG002_chrY_T0001501;gene_name=TTTY14;ID=exon:HG002_chrY_T0001501:10;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19679181	19982287	1000	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001502;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001502;gene_name=TTTY14;ID=HG002_chrY_T0001502;Name=TTTY14
HG002_chrY	CAT	exon	19679181	19679607	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001502;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001502;transcript_name=HG002_chrY_T0001502;gene_name=TTTY14;ID=exon:HG002_chrY_T0001502:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19679608	19696804	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001502;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001502;transcript_name=HG002_chrY_T0001502;gene_name=TTTY14;ID=intron:HG002_chrY_T0001502:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19696805	19697002	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001502;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001502;transcript_name=HG002_chrY_T0001502;gene_name=TTTY14;ID=exon:HG002_chrY_T0001502:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19697003	19719848	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001502;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001502;transcript_name=HG002_chrY_T0001502;gene_name=TTTY14;ID=intron:HG002_chrY_T0001502:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19719849	19719976	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001502;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001502;transcript_name=HG002_chrY_T0001502;gene_name=TTTY14;ID=exon:HG002_chrY_T0001502:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19719977	19725587	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001502;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001502;transcript_name=HG002_chrY_T0001502;gene_name=TTTY14;ID=intron:HG002_chrY_T0001502:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19725588	19726019	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001502;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001502;transcript_name=HG002_chrY_T0001502;gene_name=TTTY14;ID=exon:HG002_chrY_T0001502:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19726020	19734824	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001502;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001502;transcript_name=HG002_chrY_T0001502;gene_name=TTTY14;ID=intron:HG002_chrY_T0001502:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19734825	19734959	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001502;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001502;transcript_name=HG002_chrY_T0001502;gene_name=TTTY14;ID=exon:HG002_chrY_T0001502:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19734960	19736675	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001502;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001502;transcript_name=HG002_chrY_T0001502;gene_name=TTTY14;ID=intron:HG002_chrY_T0001502:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19736676	19736879	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001502;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001502;transcript_name=HG002_chrY_T0001502;gene_name=TTTY14;ID=exon:HG002_chrY_T0001502:5;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19736880	19778683	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001502;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001502;transcript_name=HG002_chrY_T0001502;gene_name=TTTY14;ID=intron:HG002_chrY_T0001502:5;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19778684	19779074	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001502;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001502;transcript_name=HG002_chrY_T0001502;gene_name=TTTY14;ID=exon:HG002_chrY_T0001502:6;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19779075	19783307	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001502;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001502;transcript_name=HG002_chrY_T0001502;gene_name=TTTY14;ID=intron:HG002_chrY_T0001502:6;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19783308	19783445	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001502;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001502;transcript_name=HG002_chrY_T0001502;gene_name=TTTY14;ID=exon:HG002_chrY_T0001502:7;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19783446	19947628	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001502;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001502;transcript_name=HG002_chrY_T0001502;gene_name=TTTY14;ID=intron:HG002_chrY_T0001502:7;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19947629	19947845	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001502;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001502;transcript_name=HG002_chrY_T0001502;gene_name=TTTY14;ID=exon:HG002_chrY_T0001502:8;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19947846	19949421	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001502;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001502;transcript_name=HG002_chrY_T0001502;gene_name=TTTY14;ID=intron:HG002_chrY_T0001502:8;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19949422	19950954	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001502;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001502;transcript_name=HG002_chrY_T0001502;gene_name=TTTY14;ID=exon:HG002_chrY_T0001502:9;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19950955	19974979	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001502;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001502;transcript_name=HG002_chrY_T0001502;gene_name=TTTY14;ID=intron:HG002_chrY_T0001502:9;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19974980	19975054	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001502;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001502;transcript_name=HG002_chrY_T0001502;gene_name=TTTY14;ID=exon:HG002_chrY_T0001502:10;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19975055	19982196	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001502;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001502;transcript_name=HG002_chrY_T0001502;gene_name=TTTY14;ID=intron:HG002_chrY_T0001502:10;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19982197	19982287	.	-	.	source_transcript=ENST00000652699.1;source_transcript_name=TTTY14-218;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001502;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001502;transcript_name=HG002_chrY_T0001502;gene_name=TTTY14;ID=exon:HG002_chrY_T0001502:11;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19708793	19983586	1000	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001505;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001505;gene_name=TTTY14;ID=HG002_chrY_T0001505;Name=TTTY14
HG002_chrY	CAT	exon	19708793	19711083	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001505;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001505;transcript_name=HG002_chrY_T0001505;gene_name=TTTY14;ID=exon:HG002_chrY_T0001505:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19711084	19719848	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001505;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001505;transcript_name=HG002_chrY_T0001505;gene_name=TTTY14;ID=intron:HG002_chrY_T0001505:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19719849	19719976	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001505;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001505;transcript_name=HG002_chrY_T0001505;gene_name=TTTY14;ID=exon:HG002_chrY_T0001505:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19719977	19725587	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001505;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001505;transcript_name=HG002_chrY_T0001505;gene_name=TTTY14;ID=intron:HG002_chrY_T0001505:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19725588	19725693	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001505;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001505;transcript_name=HG002_chrY_T0001505;gene_name=TTTY14;ID=exon:HG002_chrY_T0001505:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19725694	19725786	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001505;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001505;transcript_name=HG002_chrY_T0001505;gene_name=TTTY14;ID=intron:HG002_chrY_T0001505:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19725787	19726019	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001505;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001505;transcript_name=HG002_chrY_T0001505;gene_name=TTTY14;ID=exon:HG002_chrY_T0001505:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19726020	19734824	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001505;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001505;transcript_name=HG002_chrY_T0001505;gene_name=TTTY14;ID=intron:HG002_chrY_T0001505:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19734825	19734959	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001505;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001505;transcript_name=HG002_chrY_T0001505;gene_name=TTTY14;ID=exon:HG002_chrY_T0001505:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19734960	19736675	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001505;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001505;transcript_name=HG002_chrY_T0001505;gene_name=TTTY14;ID=intron:HG002_chrY_T0001505:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19736676	19736879	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001505;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001505;transcript_name=HG002_chrY_T0001505;gene_name=TTTY14;ID=exon:HG002_chrY_T0001505:5;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19736880	19739241	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001505;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001505;transcript_name=HG002_chrY_T0001505;gene_name=TTTY14;ID=intron:HG002_chrY_T0001505:5;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19739242	19739343	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001505;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001505;transcript_name=HG002_chrY_T0001505;gene_name=TTTY14;ID=exon:HG002_chrY_T0001505:6;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19739344	19739996	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001505;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001505;transcript_name=HG002_chrY_T0001505;gene_name=TTTY14;ID=intron:HG002_chrY_T0001505:6;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19739997	19740159	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001505;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001505;transcript_name=HG002_chrY_T0001505;gene_name=TTTY14;ID=exon:HG002_chrY_T0001505:7;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19740160	19742560	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001505;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001505;transcript_name=HG002_chrY_T0001505;gene_name=TTTY14;ID=intron:HG002_chrY_T0001505:7;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19742561	19742646	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001505;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001505;transcript_name=HG002_chrY_T0001505;gene_name=TTTY14;ID=exon:HG002_chrY_T0001505:8;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19742647	19744990	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001505;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001505;transcript_name=HG002_chrY_T0001505;gene_name=TTTY14;ID=intron:HG002_chrY_T0001505:8;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19744991	19745111	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001505;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001505;transcript_name=HG002_chrY_T0001505;gene_name=TTTY14;ID=exon:HG002_chrY_T0001505:9;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19745112	19745420	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001505;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001505;transcript_name=HG002_chrY_T0001505;gene_name=TTTY14;ID=intron:HG002_chrY_T0001505:9;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19745421	19745552	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001505;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001505;transcript_name=HG002_chrY_T0001505;gene_name=TTTY14;ID=exon:HG002_chrY_T0001505:10;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19745553	19783307	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001505;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001505;transcript_name=HG002_chrY_T0001505;gene_name=TTTY14;ID=intron:HG002_chrY_T0001505:10;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19783308	19783445	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001505;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001505;transcript_name=HG002_chrY_T0001505;gene_name=TTTY14;ID=exon:HG002_chrY_T0001505:11;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19783446	19838999	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001505;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001505;transcript_name=HG002_chrY_T0001505;gene_name=TTTY14;ID=intron:HG002_chrY_T0001505:11;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19839000	19839098	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001505;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001505;transcript_name=HG002_chrY_T0001505;gene_name=TTTY14;ID=exon:HG002_chrY_T0001505:12;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839099	19983300	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001505;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001505;transcript_name=HG002_chrY_T0001505;gene_name=TTTY14;ID=intron:HG002_chrY_T0001505:12;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19983301	19983586	.	-	.	source_transcript=ENST00000650897.1;source_transcript_name=TTTY14-208;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001505;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001505;transcript_name=HG002_chrY_T0001505;gene_name=TTTY14;ID=exon:HG002_chrY_T0001505:13;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19708793	19983474	1000	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001506;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001506;gene_name=TTTY14;ID=HG002_chrY_T0001506;Name=TTTY14
HG002_chrY	CAT	exon	19708793	19711083	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001506;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001506;transcript_name=HG002_chrY_T0001506;gene_name=TTTY14;ID=exon:HG002_chrY_T0001506:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19711084	19725587	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001506;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001506;transcript_name=HG002_chrY_T0001506;gene_name=TTTY14;ID=intron:HG002_chrY_T0001506:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19725588	19726019	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001506;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001506;transcript_name=HG002_chrY_T0001506;gene_name=TTTY14;ID=exon:HG002_chrY_T0001506:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19726020	19734824	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001506;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001506;transcript_name=HG002_chrY_T0001506;gene_name=TTTY14;ID=intron:HG002_chrY_T0001506:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19734825	19734959	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001506;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001506;transcript_name=HG002_chrY_T0001506;gene_name=TTTY14;ID=exon:HG002_chrY_T0001506:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19734960	19736675	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001506;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001506;transcript_name=HG002_chrY_T0001506;gene_name=TTTY14;ID=intron:HG002_chrY_T0001506:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19736676	19736879	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001506;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001506;transcript_name=HG002_chrY_T0001506;gene_name=TTTY14;ID=exon:HG002_chrY_T0001506:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19736880	19778683	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001506;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001506;transcript_name=HG002_chrY_T0001506;gene_name=TTTY14;ID=intron:HG002_chrY_T0001506:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19778684	19779074	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001506;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001506;transcript_name=HG002_chrY_T0001506;gene_name=TTTY14;ID=exon:HG002_chrY_T0001506:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19779075	19783307	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001506;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001506;transcript_name=HG002_chrY_T0001506;gene_name=TTTY14;ID=intron:HG002_chrY_T0001506:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19783308	19783445	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001506;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001506;transcript_name=HG002_chrY_T0001506;gene_name=TTTY14;ID=exon:HG002_chrY_T0001506:5;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19783446	19974979	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001506;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001506;transcript_name=HG002_chrY_T0001506;gene_name=TTTY14;ID=intron:HG002_chrY_T0001506:5;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19974980	19975054	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001506;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001506;transcript_name=HG002_chrY_T0001506;gene_name=TTTY14;ID=exon:HG002_chrY_T0001506:6;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19975055	19983300	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001506;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001506;transcript_name=HG002_chrY_T0001506;gene_name=TTTY14;ID=intron:HG002_chrY_T0001506:6;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19983301	19983474	.	-	.	source_transcript=ENST00000667260.1;source_transcript_name=TTTY14-225;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001506;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001506;transcript_name=HG002_chrY_T0001506;gene_name=TTTY14;ID=exon:HG002_chrY_T0001506:7;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19708795	19983629	1000	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001507;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001507;gene_name=TTTY14;ID=HG002_chrY_T0001507;Name=TTTY14
HG002_chrY	CAT	exon	19708795	19711083	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001507;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001507;transcript_name=HG002_chrY_T0001507;gene_name=TTTY14;ID=exon:HG002_chrY_T0001507:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19711084	19725587	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001507;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001507;transcript_name=HG002_chrY_T0001507;gene_name=TTTY14;ID=intron:HG002_chrY_T0001507:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19725588	19725693	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001507;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001507;transcript_name=HG002_chrY_T0001507;gene_name=TTTY14;ID=exon:HG002_chrY_T0001507:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19725694	19725786	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001507;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001507;transcript_name=HG002_chrY_T0001507;gene_name=TTTY14;ID=intron:HG002_chrY_T0001507:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19725787	19726019	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001507;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001507;transcript_name=HG002_chrY_T0001507;gene_name=TTTY14;ID=exon:HG002_chrY_T0001507:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19726020	19734824	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001507;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001507;transcript_name=HG002_chrY_T0001507;gene_name=TTTY14;ID=intron:HG002_chrY_T0001507:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19734825	19734959	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001507;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001507;transcript_name=HG002_chrY_T0001507;gene_name=TTTY14;ID=exon:HG002_chrY_T0001507:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19734960	19742560	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001507;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001507;transcript_name=HG002_chrY_T0001507;gene_name=TTTY14;ID=intron:HG002_chrY_T0001507:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19742561	19742650	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001507;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001507;transcript_name=HG002_chrY_T0001507;gene_name=TTTY14;ID=exon:HG002_chrY_T0001507:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19742651	19745420	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001507;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001507;transcript_name=HG002_chrY_T0001507;gene_name=TTTY14;ID=intron:HG002_chrY_T0001507:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19745421	19745552	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001507;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001507;transcript_name=HG002_chrY_T0001507;gene_name=TTTY14;ID=exon:HG002_chrY_T0001507:5;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19745553	19838999	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001507;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001507;transcript_name=HG002_chrY_T0001507;gene_name=TTTY14;ID=intron:HG002_chrY_T0001507:5;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19839000	19839098	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001507;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001507;transcript_name=HG002_chrY_T0001507;gene_name=TTTY14;ID=exon:HG002_chrY_T0001507:6;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839099	19983300	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001507;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001507;transcript_name=HG002_chrY_T0001507;gene_name=TTTY14;ID=intron:HG002_chrY_T0001507:6;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19983301	19983629	.	-	.	source_transcript=ENST00000651032.1;source_transcript_name=TTTY14-210;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001507;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001507;transcript_name=HG002_chrY_T0001507;gene_name=TTTY14;ID=exon:HG002_chrY_T0001507:7;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19708900	19983598	1000	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001508;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001508;gene_name=TTTY14;ID=HG002_chrY_T0001508;Name=TTTY14
HG002_chrY	CAT	exon	19708900	19711083	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001508;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001508;transcript_name=HG002_chrY_T0001508;gene_name=TTTY14;ID=exon:HG002_chrY_T0001508:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19711084	19719848	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001508;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001508;transcript_name=HG002_chrY_T0001508;gene_name=TTTY14;ID=intron:HG002_chrY_T0001508:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19719849	19719976	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001508;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001508;transcript_name=HG002_chrY_T0001508;gene_name=TTTY14;ID=exon:HG002_chrY_T0001508:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19719977	19725587	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001508;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001508;transcript_name=HG002_chrY_T0001508;gene_name=TTTY14;ID=intron:HG002_chrY_T0001508:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19725588	19725693	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001508;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001508;transcript_name=HG002_chrY_T0001508;gene_name=TTTY14;ID=exon:HG002_chrY_T0001508:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19725694	19725786	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001508;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001508;transcript_name=HG002_chrY_T0001508;gene_name=TTTY14;ID=intron:HG002_chrY_T0001508:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19725787	19726019	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001508;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001508;transcript_name=HG002_chrY_T0001508;gene_name=TTTY14;ID=exon:HG002_chrY_T0001508:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19726020	19734824	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001508;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001508;transcript_name=HG002_chrY_T0001508;gene_name=TTTY14;ID=intron:HG002_chrY_T0001508:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19734825	19734959	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001508;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001508;transcript_name=HG002_chrY_T0001508;gene_name=TTTY14;ID=exon:HG002_chrY_T0001508:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19734960	19736675	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001508;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001508;transcript_name=HG002_chrY_T0001508;gene_name=TTTY14;ID=intron:HG002_chrY_T0001508:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19736676	19736879	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001508;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001508;transcript_name=HG002_chrY_T0001508;gene_name=TTTY14;ID=exon:HG002_chrY_T0001508:5;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19736880	19739241	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001508;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001508;transcript_name=HG002_chrY_T0001508;gene_name=TTTY14;ID=intron:HG002_chrY_T0001508:5;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19739242	19739343	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001508;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001508;transcript_name=HG002_chrY_T0001508;gene_name=TTTY14;ID=exon:HG002_chrY_T0001508:6;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19739344	19739996	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001508;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001508;transcript_name=HG002_chrY_T0001508;gene_name=TTTY14;ID=intron:HG002_chrY_T0001508:6;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19739997	19740159	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001508;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001508;transcript_name=HG002_chrY_T0001508;gene_name=TTTY14;ID=exon:HG002_chrY_T0001508:7;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19740160	19742560	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001508;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001508;transcript_name=HG002_chrY_T0001508;gene_name=TTTY14;ID=intron:HG002_chrY_T0001508:7;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19742561	19742650	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001508;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001508;transcript_name=HG002_chrY_T0001508;gene_name=TTTY14;ID=exon:HG002_chrY_T0001508:8;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19742651	19745420	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001508;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001508;transcript_name=HG002_chrY_T0001508;gene_name=TTTY14;ID=intron:HG002_chrY_T0001508:8;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19745421	19745552	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001508;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001508;transcript_name=HG002_chrY_T0001508;gene_name=TTTY14;ID=exon:HG002_chrY_T0001508:9;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19745553	19746170	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001508;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001508;transcript_name=HG002_chrY_T0001508;gene_name=TTTY14;ID=intron:HG002_chrY_T0001508:9;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19746171	19746376	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001508;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001508;transcript_name=HG002_chrY_T0001508;gene_name=TTTY14;ID=exon:HG002_chrY_T0001508:10;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19746377	19755470	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001508;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001508;transcript_name=HG002_chrY_T0001508;gene_name=TTTY14;ID=intron:HG002_chrY_T0001508:10;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19755471	19755530	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001508;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001508;transcript_name=HG002_chrY_T0001508;gene_name=TTTY14;ID=exon:HG002_chrY_T0001508:11;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19755531	19756920	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001508;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001508;transcript_name=HG002_chrY_T0001508;gene_name=TTTY14;ID=intron:HG002_chrY_T0001508:11;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19756921	19757149	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001508;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001508;transcript_name=HG002_chrY_T0001508;gene_name=TTTY14;ID=exon:HG002_chrY_T0001508:12;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19757150	19783307	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001508;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001508;transcript_name=HG002_chrY_T0001508;gene_name=TTTY14;ID=intron:HG002_chrY_T0001508:12;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19783308	19783445	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001508;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001508;transcript_name=HG002_chrY_T0001508;gene_name=TTTY14;ID=exon:HG002_chrY_T0001508:13;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19783446	19983300	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001508;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001508;transcript_name=HG002_chrY_T0001508;gene_name=TTTY14;ID=intron:HG002_chrY_T0001508:13;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19983301	19983598	.	-	.	source_transcript=ENST00000652153.1;source_transcript_name=TTTY14-216;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001508;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001508;transcript_name=HG002_chrY_T0001508;gene_name=TTTY14;ID=exon:HG002_chrY_T0001508:14;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19712271	19983478	1000	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001509;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001509;gene_name=TTTY14;ID=HG002_chrY_T0001509;Name=TTTY14
HG002_chrY	CAT	exon	19712271	19713701	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001509;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001509;transcript_name=HG002_chrY_T0001509;gene_name=TTTY14;ID=exon:HG002_chrY_T0001509:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19713702	19719848	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001509;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001509;transcript_name=HG002_chrY_T0001509;gene_name=TTTY14;ID=intron:HG002_chrY_T0001509:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19719849	19719976	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001509;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001509;transcript_name=HG002_chrY_T0001509;gene_name=TTTY14;ID=exon:HG002_chrY_T0001509:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19719977	19725587	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001509;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001509;transcript_name=HG002_chrY_T0001509;gene_name=TTTY14;ID=intron:HG002_chrY_T0001509:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19725588	19725693	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001509;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001509;transcript_name=HG002_chrY_T0001509;gene_name=TTTY14;ID=exon:HG002_chrY_T0001509:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19725694	19725786	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001509;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001509;transcript_name=HG002_chrY_T0001509;gene_name=TTTY14;ID=intron:HG002_chrY_T0001509:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19725787	19726019	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001509;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001509;transcript_name=HG002_chrY_T0001509;gene_name=TTTY14;ID=exon:HG002_chrY_T0001509:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19726020	19734824	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001509;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001509;transcript_name=HG002_chrY_T0001509;gene_name=TTTY14;ID=intron:HG002_chrY_T0001509:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19734825	19734959	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001509;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001509;transcript_name=HG002_chrY_T0001509;gene_name=TTTY14;ID=exon:HG002_chrY_T0001509:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19734960	19736675	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001509;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001509;transcript_name=HG002_chrY_T0001509;gene_name=TTTY14;ID=intron:HG002_chrY_T0001509:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19736676	19736879	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001509;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001509;transcript_name=HG002_chrY_T0001509;gene_name=TTTY14;ID=exon:HG002_chrY_T0001509:5;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19736880	19739241	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001509;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001509;transcript_name=HG002_chrY_T0001509;gene_name=TTTY14;ID=intron:HG002_chrY_T0001509:5;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19739242	19739343	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001509;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001509;transcript_name=HG002_chrY_T0001509;gene_name=TTTY14;ID=exon:HG002_chrY_T0001509:6;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19739344	19739996	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001509;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001509;transcript_name=HG002_chrY_T0001509;gene_name=TTTY14;ID=intron:HG002_chrY_T0001509:6;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19739997	19742648	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001509;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001509;transcript_name=HG002_chrY_T0001509;gene_name=TTTY14;ID=exon:HG002_chrY_T0001509:7;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19742649	19744990	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001509;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001509;transcript_name=HG002_chrY_T0001509;gene_name=TTTY14;ID=intron:HG002_chrY_T0001509:7;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19744991	19745111	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001509;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001509;transcript_name=HG002_chrY_T0001509;gene_name=TTTY14;ID=exon:HG002_chrY_T0001509:8;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19745112	19745420	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001509;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001509;transcript_name=HG002_chrY_T0001509;gene_name=TTTY14;ID=intron:HG002_chrY_T0001509:8;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19745421	19745552	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001509;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001509;transcript_name=HG002_chrY_T0001509;gene_name=TTTY14;ID=exon:HG002_chrY_T0001509:9;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19745553	19783307	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001509;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001509;transcript_name=HG002_chrY_T0001509;gene_name=TTTY14;ID=intron:HG002_chrY_T0001509:9;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19783308	19783445	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001509;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001509;transcript_name=HG002_chrY_T0001509;gene_name=TTTY14;ID=exon:HG002_chrY_T0001509:10;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19783446	19947628	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001509;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001509;transcript_name=HG002_chrY_T0001509;gene_name=TTTY14;ID=intron:HG002_chrY_T0001509:10;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19947629	19949605	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001509;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001509;transcript_name=HG002_chrY_T0001509;gene_name=TTTY14;ID=exon:HG002_chrY_T0001509:11;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19949606	19950920	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001509;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001509;transcript_name=HG002_chrY_T0001509;gene_name=TTTY14;ID=intron:HG002_chrY_T0001509:11;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19950921	19950954	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001509;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001509;transcript_name=HG002_chrY_T0001509;gene_name=TTTY14;ID=exon:HG002_chrY_T0001509:12;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19950955	19951500	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001509;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001509;transcript_name=HG002_chrY_T0001509;gene_name=TTTY14;ID=intron:HG002_chrY_T0001509:12;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19951501	19951550	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001509;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001509;transcript_name=HG002_chrY_T0001509;gene_name=TTTY14;ID=exon:HG002_chrY_T0001509:13;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19951551	19983300	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001509;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001509;transcript_name=HG002_chrY_T0001509;gene_name=TTTY14;ID=intron:HG002_chrY_T0001509:13;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19983301	19983478	.	-	.	source_transcript=ENST00000652348.1;source_transcript_name=TTTY14-217;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652348.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652348.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001509;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001509;transcript_name=HG002_chrY_T0001509;gene_name=TTTY14;ID=exon:HG002_chrY_T0001509:14;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19742405	19746392	1000	-	.	source_transcript=ENST00000805060.1;source_transcript_name=TTTY14-234;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805060.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001516;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001516;gene_name=TTTY14;ID=HG002_chrY_T0001516;Name=TTTY14
HG002_chrY	CAT	exon	19742405	19742646	.	-	.	source_transcript=ENST00000805060.1;source_transcript_name=TTTY14-234;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001516;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001516;transcript_name=HG002_chrY_T0001516;gene_name=TTTY14;ID=exon:HG002_chrY_T0001516:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19742647	19745420	.	-	.	source_transcript=ENST00000805060.1;source_transcript_name=TTTY14-234;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001516;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001516;transcript_name=HG002_chrY_T0001516;gene_name=TTTY14;ID=intron:HG002_chrY_T0001516:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19745421	19745552	.	-	.	source_transcript=ENST00000805060.1;source_transcript_name=TTTY14-234;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001516;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001516;transcript_name=HG002_chrY_T0001516;gene_name=TTTY14;ID=exon:HG002_chrY_T0001516:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19745553	19746170	.	-	.	source_transcript=ENST00000805060.1;source_transcript_name=TTTY14-234;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001516;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001516;transcript_name=HG002_chrY_T0001516;gene_name=TTTY14;ID=intron:HG002_chrY_T0001516:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19746171	19746392	.	-	.	source_transcript=ENST00000805060.1;source_transcript_name=TTTY14-234;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001516;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001516;transcript_name=HG002_chrY_T0001516;gene_name=TTTY14;ID=exon:HG002_chrY_T0001516:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19778741	19983616	1000	-	.	source_transcript=ENST00000667640.1;source_transcript_name=TTTY14-229;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667640.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667640.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001519;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001519;gene_name=TTTY14;ID=HG002_chrY_T0001519;Name=TTTY14
HG002_chrY	CAT	exon	19778741	19779074	.	-	.	source_transcript=ENST00000667640.1;source_transcript_name=TTTY14-229;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667640.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667640.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001519;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001519;transcript_name=HG002_chrY_T0001519;gene_name=TTTY14;ID=exon:HG002_chrY_T0001519:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19779075	19783307	.	-	.	source_transcript=ENST00000667640.1;source_transcript_name=TTTY14-229;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667640.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667640.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001519;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001519;transcript_name=HG002_chrY_T0001519;gene_name=TTTY14;ID=intron:HG002_chrY_T0001519:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19783308	19783445	.	-	.	source_transcript=ENST00000667640.1;source_transcript_name=TTTY14-229;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667640.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667640.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001519;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001519;transcript_name=HG002_chrY_T0001519;gene_name=TTTY14;ID=exon:HG002_chrY_T0001519:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19783446	19974979	.	-	.	source_transcript=ENST00000667640.1;source_transcript_name=TTTY14-229;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667640.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667640.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001519;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001519;transcript_name=HG002_chrY_T0001519;gene_name=TTTY14;ID=intron:HG002_chrY_T0001519:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19974980	19975054	.	-	.	source_transcript=ENST00000667640.1;source_transcript_name=TTTY14-229;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667640.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667640.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001519;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001519;transcript_name=HG002_chrY_T0001519;gene_name=TTTY14;ID=exon:HG002_chrY_T0001519:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19975055	19983523	.	-	.	source_transcript=ENST00000667640.1;source_transcript_name=TTTY14-229;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667640.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667640.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001519;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001519;transcript_name=HG002_chrY_T0001519;gene_name=TTTY14;ID=intron:HG002_chrY_T0001519:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19983524	19983616	.	-	.	source_transcript=ENST00000667640.1;source_transcript_name=TTTY14-229;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667640.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667640.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001519;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001519;transcript_name=HG002_chrY_T0001519;gene_name=TTTY14;ID=exon:HG002_chrY_T0001519:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19778741	19962436	1000	-	.	source_transcript=ENST00000660026.1;source_transcript_name=TTTY14-222;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660026.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001520;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001520;gene_name=TTTY14;ID=HG002_chrY_T0001520;Name=TTTY14
HG002_chrY	CAT	exon	19778741	19779074	.	-	.	source_transcript=ENST00000660026.1;source_transcript_name=TTTY14-222;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001520;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001520;transcript_name=HG002_chrY_T0001520;gene_name=TTTY14;ID=exon:HG002_chrY_T0001520:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19779075	19783307	.	-	.	source_transcript=ENST00000660026.1;source_transcript_name=TTTY14-222;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001520;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001520;transcript_name=HG002_chrY_T0001520;gene_name=TTTY14;ID=intron:HG002_chrY_T0001520:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19783308	19783445	.	-	.	source_transcript=ENST00000660026.1;source_transcript_name=TTTY14-222;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001520;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001520;transcript_name=HG002_chrY_T0001520;gene_name=TTTY14;ID=exon:HG002_chrY_T0001520:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19783446	19962223	.	-	.	source_transcript=ENST00000660026.1;source_transcript_name=TTTY14-222;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001520;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001520;transcript_name=HG002_chrY_T0001520;gene_name=TTTY14;ID=intron:HG002_chrY_T0001520:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19962224	19962436	.	-	.	source_transcript=ENST00000660026.1;source_transcript_name=TTTY14-222;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001520;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001520;transcript_name=HG002_chrY_T0001520;gene_name=TTTY14;ID=exon:HG002_chrY_T0001520:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19778741	19982363	1000	-	.	source_transcript=ENST00000670354.2;source_transcript_name=TTTY14-233;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670354.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670354.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001521;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001521;gene_name=TTTY14;ID=HG002_chrY_T0001521;Name=TTTY14
HG002_chrY	CAT	exon	19778741	19779074	.	-	.	source_transcript=ENST00000670354.2;source_transcript_name=TTTY14-233;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670354.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670354.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001521;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001521;transcript_name=HG002_chrY_T0001521;gene_name=TTTY14;ID=exon:HG002_chrY_T0001521:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19779075	19783307	.	-	.	source_transcript=ENST00000670354.2;source_transcript_name=TTTY14-233;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670354.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670354.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001521;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001521;transcript_name=HG002_chrY_T0001521;gene_name=TTTY14;ID=intron:HG002_chrY_T0001521:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19783308	19783445	.	-	.	source_transcript=ENST00000670354.2;source_transcript_name=TTTY14-233;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670354.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670354.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001521;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001521;transcript_name=HG002_chrY_T0001521;gene_name=TTTY14;ID=exon:HG002_chrY_T0001521:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19783446	19974979	.	-	.	source_transcript=ENST00000670354.2;source_transcript_name=TTTY14-233;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670354.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670354.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001521;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001521;transcript_name=HG002_chrY_T0001521;gene_name=TTTY14;ID=intron:HG002_chrY_T0001521:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19974980	19975054	.	-	.	source_transcript=ENST00000670354.2;source_transcript_name=TTTY14-233;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670354.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670354.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001521;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001521;transcript_name=HG002_chrY_T0001521;gene_name=TTTY14;ID=exon:HG002_chrY_T0001521:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19975055	19982196	.	-	.	source_transcript=ENST00000670354.2;source_transcript_name=TTTY14-233;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670354.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670354.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001521;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001521;transcript_name=HG002_chrY_T0001521;gene_name=TTTY14;ID=intron:HG002_chrY_T0001521:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19982197	19982363	.	-	.	source_transcript=ENST00000670354.2;source_transcript_name=TTTY14-233;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670354.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670354.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001521;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001521;transcript_name=HG002_chrY_T0001521;gene_name=TTTY14;ID=exon:HG002_chrY_T0001521:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19778741	19962263	1000	-	.	source_transcript=ENST00000850208.1;source_transcript_name=TTTY14-242;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850208.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001522;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001522;gene_name=TTTY14;ID=HG002_chrY_T0001522;Name=TTTY14
HG002_chrY	CAT	exon	19778741	19779074	.	-	.	source_transcript=ENST00000850208.1;source_transcript_name=TTTY14-242;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850208.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001522;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001522;transcript_name=HG002_chrY_T0001522;gene_name=TTTY14;ID=exon:HG002_chrY_T0001522:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19779075	19783307	.	-	.	source_transcript=ENST00000850208.1;source_transcript_name=TTTY14-242;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850208.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001522;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001522;transcript_name=HG002_chrY_T0001522;gene_name=TTTY14;ID=intron:HG002_chrY_T0001522:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19783308	19783445	.	-	.	source_transcript=ENST00000850208.1;source_transcript_name=TTTY14-242;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850208.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001522;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001522;transcript_name=HG002_chrY_T0001522;gene_name=TTTY14;ID=exon:HG002_chrY_T0001522:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19783446	19833332	.	-	.	source_transcript=ENST00000850208.1;source_transcript_name=TTTY14-242;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850208.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001522;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001522;transcript_name=HG002_chrY_T0001522;gene_name=TTTY14;ID=intron:HG002_chrY_T0001522:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19833333	19833430	.	-	.	source_transcript=ENST00000850208.1;source_transcript_name=TTTY14-242;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850208.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001522;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001522;transcript_name=HG002_chrY_T0001522;gene_name=TTTY14;ID=exon:HG002_chrY_T0001522:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19833431	19838999	.	-	.	source_transcript=ENST00000850208.1;source_transcript_name=TTTY14-242;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850208.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001522;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001522;transcript_name=HG002_chrY_T0001522;gene_name=TTTY14;ID=intron:HG002_chrY_T0001522:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19839000	19839098	.	-	.	source_transcript=ENST00000850208.1;source_transcript_name=TTTY14-242;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850208.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001522;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001522;transcript_name=HG002_chrY_T0001522;gene_name=TTTY14;ID=exon:HG002_chrY_T0001522:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839099	19962133	.	-	.	source_transcript=ENST00000850208.1;source_transcript_name=TTTY14-242;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850208.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001522;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001522;transcript_name=HG002_chrY_T0001522;gene_name=TTTY14;ID=intron:HG002_chrY_T0001522:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19962134	19962263	.	-	.	source_transcript=ENST00000850208.1;source_transcript_name=TTTY14-242;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850208.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001522;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001522;transcript_name=HG002_chrY_T0001522;gene_name=TTTY14;ID=exon:HG002_chrY_T0001522:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19778741	19982280	1000	-	.	source_transcript=ENST00000667262.2;source_transcript_name=TTTY14-226;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667262.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667262.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001523;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001523;gene_name=TTTY14;ID=HG002_chrY_T0001523;Name=TTTY14
HG002_chrY	CAT	exon	19778741	19779074	.	-	.	source_transcript=ENST00000667262.2;source_transcript_name=TTTY14-226;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667262.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667262.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001523;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001523;transcript_name=HG002_chrY_T0001523;gene_name=TTTY14;ID=exon:HG002_chrY_T0001523:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19779075	19783307	.	-	.	source_transcript=ENST00000667262.2;source_transcript_name=TTTY14-226;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667262.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667262.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001523;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001523;transcript_name=HG002_chrY_T0001523;gene_name=TTTY14;ID=intron:HG002_chrY_T0001523:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19783308	19783445	.	-	.	source_transcript=ENST00000667262.2;source_transcript_name=TTTY14-226;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667262.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667262.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001523;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001523;transcript_name=HG002_chrY_T0001523;gene_name=TTTY14;ID=exon:HG002_chrY_T0001523:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19783446	19982196	.	-	.	source_transcript=ENST00000667262.2;source_transcript_name=TTTY14-226;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667262.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667262.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001523;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001523;transcript_name=HG002_chrY_T0001523;gene_name=TTTY14;ID=intron:HG002_chrY_T0001523:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19982197	19982280	.	-	.	source_transcript=ENST00000667262.2;source_transcript_name=TTTY14-226;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667262.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667262.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001523;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001523;transcript_name=HG002_chrY_T0001523;gene_name=TTTY14;ID=exon:HG002_chrY_T0001523:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19778741	19982282	1000	-	.	source_transcript=ENST00000670243.2;source_transcript_name=TTTY14-232;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670243.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670243.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001524;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001524;gene_name=TTTY14;ID=HG002_chrY_T0001524;Name=TTTY14
HG002_chrY	CAT	exon	19778741	19779074	.	-	.	source_transcript=ENST00000670243.2;source_transcript_name=TTTY14-232;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670243.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670243.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001524;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001524;transcript_name=HG002_chrY_T0001524;gene_name=TTTY14;ID=exon:HG002_chrY_T0001524:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19779075	19783307	.	-	.	source_transcript=ENST00000670243.2;source_transcript_name=TTTY14-232;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670243.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670243.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001524;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001524;transcript_name=HG002_chrY_T0001524;gene_name=TTTY14;ID=intron:HG002_chrY_T0001524:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19783308	19783445	.	-	.	source_transcript=ENST00000670243.2;source_transcript_name=TTTY14-232;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670243.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670243.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001524;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001524;transcript_name=HG002_chrY_T0001524;gene_name=TTTY14;ID=exon:HG002_chrY_T0001524:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19783446	19979754	.	-	.	source_transcript=ENST00000670243.2;source_transcript_name=TTTY14-232;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670243.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670243.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001524;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001524;transcript_name=HG002_chrY_T0001524;gene_name=TTTY14;ID=intron:HG002_chrY_T0001524:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19979755	19979817	.	-	.	source_transcript=ENST00000670243.2;source_transcript_name=TTTY14-232;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670243.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670243.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001524;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001524;transcript_name=HG002_chrY_T0001524;gene_name=TTTY14;ID=exon:HG002_chrY_T0001524:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19979818	19982196	.	-	.	source_transcript=ENST00000670243.2;source_transcript_name=TTTY14-232;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670243.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670243.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001524;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001524;transcript_name=HG002_chrY_T0001524;gene_name=TTTY14;ID=intron:HG002_chrY_T0001524:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19982197	19982282	.	-	.	source_transcript=ENST00000670243.2;source_transcript_name=TTTY14-232;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670243.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000670243.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001524;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001524;transcript_name=HG002_chrY_T0001524;gene_name=TTTY14;ID=exon:HG002_chrY_T0001524:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19778741	19962502	1000	-	.	source_transcript=ENST00000663061.2;source_transcript_name=TTTY14-223;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000663061.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000663061.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001525;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001525;gene_name=TTTY14;ID=HG002_chrY_T0001525;Name=TTTY14
HG002_chrY	CAT	exon	19778741	19779074	.	-	.	source_transcript=ENST00000663061.2;source_transcript_name=TTTY14-223;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000663061.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000663061.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001525;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001525;transcript_name=HG002_chrY_T0001525;gene_name=TTTY14;ID=exon:HG002_chrY_T0001525:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19779075	19783307	.	-	.	source_transcript=ENST00000663061.2;source_transcript_name=TTTY14-223;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000663061.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000663061.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001525;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001525;transcript_name=HG002_chrY_T0001525;gene_name=TTTY14;ID=intron:HG002_chrY_T0001525:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19783308	19783445	.	-	.	source_transcript=ENST00000663061.2;source_transcript_name=TTTY14-223;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000663061.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000663061.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001525;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001525;transcript_name=HG002_chrY_T0001525;gene_name=TTTY14;ID=exon:HG002_chrY_T0001525:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19783446	19962133	.	-	.	source_transcript=ENST00000663061.2;source_transcript_name=TTTY14-223;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000663061.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000663061.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001525;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001525;transcript_name=HG002_chrY_T0001525;gene_name=TTTY14;ID=intron:HG002_chrY_T0001525:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19962134	19962502	.	-	.	source_transcript=ENST00000663061.2;source_transcript_name=TTTY14-223;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000663061.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000663061.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001525;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001525;transcript_name=HG002_chrY_T0001525;gene_name=TTTY14;ID=exon:HG002_chrY_T0001525:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19778741	19982267	1000	-	.	source_transcript=ENST00000850203.1;source_transcript_name=TTTY14-237;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850203.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001526;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001526;gene_name=TTTY14;ID=HG002_chrY_T0001526;Name=TTTY14
HG002_chrY	CAT	exon	19778741	19779074	.	-	.	source_transcript=ENST00000850203.1;source_transcript_name=TTTY14-237;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001526;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001526;transcript_name=HG002_chrY_T0001526;gene_name=TTTY14;ID=exon:HG002_chrY_T0001526:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19779075	19783307	.	-	.	source_transcript=ENST00000850203.1;source_transcript_name=TTTY14-237;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001526;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001526;transcript_name=HG002_chrY_T0001526;gene_name=TTTY14;ID=intron:HG002_chrY_T0001526:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19783308	19783445	.	-	.	source_transcript=ENST00000850203.1;source_transcript_name=TTTY14-237;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001526;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001526;transcript_name=HG002_chrY_T0001526;gene_name=TTTY14;ID=exon:HG002_chrY_T0001526:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19783446	19838999	.	-	.	source_transcript=ENST00000850203.1;source_transcript_name=TTTY14-237;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001526;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001526;transcript_name=HG002_chrY_T0001526;gene_name=TTTY14;ID=intron:HG002_chrY_T0001526:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19839000	19839098	.	-	.	source_transcript=ENST00000850203.1;source_transcript_name=TTTY14-237;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001526;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001526;transcript_name=HG002_chrY_T0001526;gene_name=TTTY14;ID=exon:HG002_chrY_T0001526:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839099	19839613	.	-	.	source_transcript=ENST00000850203.1;source_transcript_name=TTTY14-237;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001526;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001526;transcript_name=HG002_chrY_T0001526;gene_name=TTTY14;ID=intron:HG002_chrY_T0001526:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19839614	19839732	.	-	.	source_transcript=ENST00000850203.1;source_transcript_name=TTTY14-237;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001526;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001526;transcript_name=HG002_chrY_T0001526;gene_name=TTTY14;ID=exon:HG002_chrY_T0001526:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839733	19982196	.	-	.	source_transcript=ENST00000850203.1;source_transcript_name=TTTY14-237;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001526;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001526;transcript_name=HG002_chrY_T0001526;gene_name=TTTY14;ID=intron:HG002_chrY_T0001526:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19982197	19982267	.	-	.	source_transcript=ENST00000850203.1;source_transcript_name=TTTY14-237;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001526;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001526;transcript_name=HG002_chrY_T0001526;gene_name=TTTY14;ID=exon:HG002_chrY_T0001526:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19778741	19962486	1000	-	.	source_transcript=ENST00000669716.1;source_transcript_name=TTTY14-230;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000669716.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001527;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001527;gene_name=TTTY14;ID=HG002_chrY_T0001527;Name=TTTY14
HG002_chrY	CAT	exon	19778741	19779074	.	-	.	source_transcript=ENST00000669716.1;source_transcript_name=TTTY14-230;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000669716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001527;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001527;transcript_name=HG002_chrY_T0001527;gene_name=TTTY14;ID=exon:HG002_chrY_T0001527:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19779075	19783307	.	-	.	source_transcript=ENST00000669716.1;source_transcript_name=TTTY14-230;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000669716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001527;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001527;transcript_name=HG002_chrY_T0001527;gene_name=TTTY14;ID=intron:HG002_chrY_T0001527:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19783308	19783445	.	-	.	source_transcript=ENST00000669716.1;source_transcript_name=TTTY14-230;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000669716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001527;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001527;transcript_name=HG002_chrY_T0001527;gene_name=TTTY14;ID=exon:HG002_chrY_T0001527:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19783446	19962342	.	-	.	source_transcript=ENST00000669716.1;source_transcript_name=TTTY14-230;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000669716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001527;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001527;transcript_name=HG002_chrY_T0001527;gene_name=TTTY14;ID=intron:HG002_chrY_T0001527:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19962343	19962486	.	-	.	source_transcript=ENST00000669716.1;source_transcript_name=TTTY14-230;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000669716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001527;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001527;transcript_name=HG002_chrY_T0001527;gene_name=TTTY14;ID=exon:HG002_chrY_T0001527:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19778741	19982264	1000	-	.	source_transcript=ENST00000850204.1;source_transcript_name=TTTY14-238;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850204.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001528;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001528;gene_name=TTTY14;ID=HG002_chrY_T0001528;Name=TTTY14
HG002_chrY	CAT	exon	19778741	19779074	.	-	.	source_transcript=ENST00000850204.1;source_transcript_name=TTTY14-238;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850204.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001528;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001528;transcript_name=HG002_chrY_T0001528;gene_name=TTTY14;ID=exon:HG002_chrY_T0001528:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19779075	19783307	.	-	.	source_transcript=ENST00000850204.1;source_transcript_name=TTTY14-238;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850204.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001528;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001528;transcript_name=HG002_chrY_T0001528;gene_name=TTTY14;ID=intron:HG002_chrY_T0001528:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19783308	19783445	.	-	.	source_transcript=ENST00000850204.1;source_transcript_name=TTTY14-238;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850204.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001528;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001528;transcript_name=HG002_chrY_T0001528;gene_name=TTTY14;ID=exon:HG002_chrY_T0001528:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19783446	19974979	.	-	.	source_transcript=ENST00000850204.1;source_transcript_name=TTTY14-238;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850204.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001528;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001528;transcript_name=HG002_chrY_T0001528;gene_name=TTTY14;ID=intron:HG002_chrY_T0001528:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19974980	19975054	.	-	.	source_transcript=ENST00000850204.1;source_transcript_name=TTTY14-238;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850204.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001528;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001528;transcript_name=HG002_chrY_T0001528;gene_name=TTTY14;ID=exon:HG002_chrY_T0001528:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19975055	19979754	.	-	.	source_transcript=ENST00000850204.1;source_transcript_name=TTTY14-238;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850204.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001528;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001528;transcript_name=HG002_chrY_T0001528;gene_name=TTTY14;ID=intron:HG002_chrY_T0001528:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19979755	19979817	.	-	.	source_transcript=ENST00000850204.1;source_transcript_name=TTTY14-238;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850204.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001528;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001528;transcript_name=HG002_chrY_T0001528;gene_name=TTTY14;ID=exon:HG002_chrY_T0001528:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19979818	19982196	.	-	.	source_transcript=ENST00000850204.1;source_transcript_name=TTTY14-238;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850204.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001528;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001528;transcript_name=HG002_chrY_T0001528;gene_name=TTTY14;ID=intron:HG002_chrY_T0001528:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19982197	19982264	.	-	.	source_transcript=ENST00000850204.1;source_transcript_name=TTTY14-238;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850204.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001528;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001528;transcript_name=HG002_chrY_T0001528;gene_name=TTTY14;ID=exon:HG002_chrY_T0001528:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19778741	19982280	1000	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001529;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001529;gene_name=TTTY14;ID=HG002_chrY_T0001529;Name=TTTY14
HG002_chrY	CAT	exon	19778741	19779074	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001529;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001529;transcript_name=HG002_chrY_T0001529;gene_name=TTTY14;ID=exon:HG002_chrY_T0001529:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19779075	19783307	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001529;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001529;transcript_name=HG002_chrY_T0001529;gene_name=TTTY14;ID=intron:HG002_chrY_T0001529:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19783308	19783445	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001529;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001529;transcript_name=HG002_chrY_T0001529;gene_name=TTTY14;ID=exon:HG002_chrY_T0001529:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19783446	19947628	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001529;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001529;transcript_name=HG002_chrY_T0001529;gene_name=TTTY14;ID=intron:HG002_chrY_T0001529:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19947629	19947845	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001529;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001529;transcript_name=HG002_chrY_T0001529;gene_name=TTTY14;ID=exon:HG002_chrY_T0001529:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19947846	19949421	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001529;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001529;transcript_name=HG002_chrY_T0001529;gene_name=TTTY14;ID=intron:HG002_chrY_T0001529:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19949422	19949605	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001529;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001529;transcript_name=HG002_chrY_T0001529;gene_name=TTTY14;ID=exon:HG002_chrY_T0001529:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19949606	19950800	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001529;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001529;transcript_name=HG002_chrY_T0001529;gene_name=TTTY14;ID=intron:HG002_chrY_T0001529:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19950801	19950954	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001529;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001529;transcript_name=HG002_chrY_T0001529;gene_name=TTTY14;ID=exon:HG002_chrY_T0001529:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19950955	19974979	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001529;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001529;transcript_name=HG002_chrY_T0001529;gene_name=TTTY14;ID=intron:HG002_chrY_T0001529:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19974980	19975054	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001529;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001529;transcript_name=HG002_chrY_T0001529;gene_name=TTTY14;ID=exon:HG002_chrY_T0001529:5;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19975055	19982196	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001529;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001529;transcript_name=HG002_chrY_T0001529;gene_name=TTTY14;ID=intron:HG002_chrY_T0001529:5;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19982197	19982280	.	-	.	source_transcript=ENST00000657901.1;source_transcript_name=TTTY14-220;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001529;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001529;transcript_name=HG002_chrY_T0001529;gene_name=TTTY14;ID=exon:HG002_chrY_T0001529:6;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19778741	19962265	1000	-	.	source_transcript=ENST00000850207.1;source_transcript_name=TTTY14-241;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850207.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001530;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001530;gene_name=TTTY14;ID=HG002_chrY_T0001530;Name=TTTY14
HG002_chrY	CAT	exon	19778741	19779074	.	-	.	source_transcript=ENST00000850207.1;source_transcript_name=TTTY14-241;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001530;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001530;transcript_name=HG002_chrY_T0001530;gene_name=TTTY14;ID=exon:HG002_chrY_T0001530:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19779075	19783307	.	-	.	source_transcript=ENST00000850207.1;source_transcript_name=TTTY14-241;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001530;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001530;transcript_name=HG002_chrY_T0001530;gene_name=TTTY14;ID=intron:HG002_chrY_T0001530:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19783308	19783445	.	-	.	source_transcript=ENST00000850207.1;source_transcript_name=TTTY14-241;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001530;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001530;transcript_name=HG002_chrY_T0001530;gene_name=TTTY14;ID=exon:HG002_chrY_T0001530:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19783446	19838907	.	-	.	source_transcript=ENST00000850207.1;source_transcript_name=TTTY14-241;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001530;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001530;transcript_name=HG002_chrY_T0001530;gene_name=TTTY14;ID=intron:HG002_chrY_T0001530:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19838908	19839098	.	-	.	source_transcript=ENST00000850207.1;source_transcript_name=TTTY14-241;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001530;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001530;transcript_name=HG002_chrY_T0001530;gene_name=TTTY14;ID=exon:HG002_chrY_T0001530:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839099	19962133	.	-	.	source_transcript=ENST00000850207.1;source_transcript_name=TTTY14-241;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001530;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001530;transcript_name=HG002_chrY_T0001530;gene_name=TTTY14;ID=intron:HG002_chrY_T0001530:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19962134	19962265	.	-	.	source_transcript=ENST00000850207.1;source_transcript_name=TTTY14-241;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001530;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001530;transcript_name=HG002_chrY_T0001530;gene_name=TTTY14;ID=exon:HG002_chrY_T0001530:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19778741	19962237	1000	-	.	source_transcript=ENST00000850209.1;source_transcript_name=TTTY14-243;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850209.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001531;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001531;gene_name=TTTY14;ID=HG002_chrY_T0001531;Name=TTTY14
HG002_chrY	CAT	exon	19778741	19779074	.	-	.	source_transcript=ENST00000850209.1;source_transcript_name=TTTY14-243;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001531;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001531;transcript_name=HG002_chrY_T0001531;gene_name=TTTY14;ID=exon:HG002_chrY_T0001531:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19779075	19783307	.	-	.	source_transcript=ENST00000850209.1;source_transcript_name=TTTY14-243;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001531;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001531;transcript_name=HG002_chrY_T0001531;gene_name=TTTY14;ID=intron:HG002_chrY_T0001531:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19783308	19783445	.	-	.	source_transcript=ENST00000850209.1;source_transcript_name=TTTY14-243;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001531;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001531;transcript_name=HG002_chrY_T0001531;gene_name=TTTY14;ID=exon:HG002_chrY_T0001531:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19783446	19838999	.	-	.	source_transcript=ENST00000850209.1;source_transcript_name=TTTY14-243;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001531;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001531;transcript_name=HG002_chrY_T0001531;gene_name=TTTY14;ID=intron:HG002_chrY_T0001531:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19839000	19839098	.	-	.	source_transcript=ENST00000850209.1;source_transcript_name=TTTY14-243;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001531;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001531;transcript_name=HG002_chrY_T0001531;gene_name=TTTY14;ID=exon:HG002_chrY_T0001531:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839099	19962133	.	-	.	source_transcript=ENST00000850209.1;source_transcript_name=TTTY14-243;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001531;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001531;transcript_name=HG002_chrY_T0001531;gene_name=TTTY14;ID=intron:HG002_chrY_T0001531:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19962134	19962237	.	-	.	source_transcript=ENST00000850209.1;source_transcript_name=TTTY14-243;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001531;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001531;transcript_name=HG002_chrY_T0001531;gene_name=TTTY14;ID=exon:HG002_chrY_T0001531:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19778741	19784468	1000	-	.	source_transcript=ENST00000324446.3;source_transcript_name=TTTY14-201;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000324446.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000324446.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001532;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001532;gene_name=TTTY14;ID=HG002_chrY_T0001532;Name=TTTY14
HG002_chrY	CAT	exon	19778741	19779074	.	-	.	source_transcript=ENST00000324446.3;source_transcript_name=TTTY14-201;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000324446.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000324446.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001532;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001532;transcript_name=HG002_chrY_T0001532;gene_name=TTTY14;ID=exon:HG002_chrY_T0001532:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19779075	19783307	.	-	.	source_transcript=ENST00000324446.3;source_transcript_name=TTTY14-201;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000324446.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000324446.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001532;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001532;transcript_name=HG002_chrY_T0001532;gene_name=TTTY14;ID=intron:HG002_chrY_T0001532:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19783308	19784468	.	-	.	source_transcript=ENST00000324446.3;source_transcript_name=TTTY14-201;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000324446.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000324446.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001532;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001532;transcript_name=HG002_chrY_T0001532;gene_name=TTTY14;ID=exon:HG002_chrY_T0001532:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19778741	19983646	1000	-	.	source_transcript=ENST00000850201.1;source_transcript_name=TTTY14-235;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850201.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001533;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001533;gene_name=TTTY14;ID=HG002_chrY_T0001533;Name=TTTY14
HG002_chrY	CAT	exon	19778741	19779074	.	-	.	source_transcript=ENST00000850201.1;source_transcript_name=TTTY14-235;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001533;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001533;transcript_name=HG002_chrY_T0001533;gene_name=TTTY14;ID=exon:HG002_chrY_T0001533:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19779075	19783307	.	-	.	source_transcript=ENST00000850201.1;source_transcript_name=TTTY14-235;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001533;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001533;transcript_name=HG002_chrY_T0001533;gene_name=TTTY14;ID=intron:HG002_chrY_T0001533:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19783308	19783445	.	-	.	source_transcript=ENST00000850201.1;source_transcript_name=TTTY14-235;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001533;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001533;transcript_name=HG002_chrY_T0001533;gene_name=TTTY14;ID=exon:HG002_chrY_T0001533:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19783446	19838999	.	-	.	source_transcript=ENST00000850201.1;source_transcript_name=TTTY14-235;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001533;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001533;transcript_name=HG002_chrY_T0001533;gene_name=TTTY14;ID=intron:HG002_chrY_T0001533:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19839000	19839098	.	-	.	source_transcript=ENST00000850201.1;source_transcript_name=TTTY14-235;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001533;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001533;transcript_name=HG002_chrY_T0001533;gene_name=TTTY14;ID=exon:HG002_chrY_T0001533:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839099	19983523	.	-	.	source_transcript=ENST00000850201.1;source_transcript_name=TTTY14-235;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001533;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001533;transcript_name=HG002_chrY_T0001533;gene_name=TTTY14;ID=intron:HG002_chrY_T0001533:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19983524	19983646	.	-	.	source_transcript=ENST00000850201.1;source_transcript_name=TTTY14-235;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001533;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001533;transcript_name=HG002_chrY_T0001533;gene_name=TTTY14;ID=exon:HG002_chrY_T0001533:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19778741	19982285	1000	-	.	source_transcript=ENST00000664804.1;source_transcript_name=TTTY14-224;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664804.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001534;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001534;gene_name=TTTY14;ID=HG002_chrY_T0001534;Name=TTTY14
HG002_chrY	CAT	exon	19778741	19779074	.	-	.	source_transcript=ENST00000664804.1;source_transcript_name=TTTY14-224;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001534;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001534;transcript_name=HG002_chrY_T0001534;gene_name=TTTY14;ID=exon:HG002_chrY_T0001534:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19779075	19783307	.	-	.	source_transcript=ENST00000664804.1;source_transcript_name=TTTY14-224;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001534;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001534;transcript_name=HG002_chrY_T0001534;gene_name=TTTY14;ID=intron:HG002_chrY_T0001534:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19783308	19783445	.	-	.	source_transcript=ENST00000664804.1;source_transcript_name=TTTY14-224;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001534;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001534;transcript_name=HG002_chrY_T0001534;gene_name=TTTY14;ID=exon:HG002_chrY_T0001534:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19783446	19838907	.	-	.	source_transcript=ENST00000664804.1;source_transcript_name=TTTY14-224;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001534;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001534;transcript_name=HG002_chrY_T0001534;gene_name=TTTY14;ID=intron:HG002_chrY_T0001534:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19838908	19839098	.	-	.	source_transcript=ENST00000664804.1;source_transcript_name=TTTY14-224;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001534;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001534;transcript_name=HG002_chrY_T0001534;gene_name=TTTY14;ID=exon:HG002_chrY_T0001534:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839099	19974979	.	-	.	source_transcript=ENST00000664804.1;source_transcript_name=TTTY14-224;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001534;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001534;transcript_name=HG002_chrY_T0001534;gene_name=TTTY14;ID=intron:HG002_chrY_T0001534:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19974980	19975054	.	-	.	source_transcript=ENST00000664804.1;source_transcript_name=TTTY14-224;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001534;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001534;transcript_name=HG002_chrY_T0001534;gene_name=TTTY14;ID=exon:HG002_chrY_T0001534:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19975055	19982196	.	-	.	source_transcript=ENST00000664804.1;source_transcript_name=TTTY14-224;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001534;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001534;transcript_name=HG002_chrY_T0001534;gene_name=TTTY14;ID=intron:HG002_chrY_T0001534:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19982197	19982285	.	-	.	source_transcript=ENST00000664804.1;source_transcript_name=TTTY14-224;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001534;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001534;transcript_name=HG002_chrY_T0001534;gene_name=TTTY14;ID=exon:HG002_chrY_T0001534:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19778741	19982276	1000	-	.	source_transcript=ENST00000850202.1;source_transcript_name=TTTY14-236;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850202.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001535;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001535;gene_name=TTTY14;ID=HG002_chrY_T0001535;Name=TTTY14
HG002_chrY	CAT	exon	19778741	19779074	.	-	.	source_transcript=ENST00000850202.1;source_transcript_name=TTTY14-236;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850202.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001535;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001535;transcript_name=HG002_chrY_T0001535;gene_name=TTTY14;ID=exon:HG002_chrY_T0001535:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19779075	19783307	.	-	.	source_transcript=ENST00000850202.1;source_transcript_name=TTTY14-236;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850202.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001535;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001535;transcript_name=HG002_chrY_T0001535;gene_name=TTTY14;ID=intron:HG002_chrY_T0001535:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19783308	19783445	.	-	.	source_transcript=ENST00000850202.1;source_transcript_name=TTTY14-236;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850202.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001535;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001535;transcript_name=HG002_chrY_T0001535;gene_name=TTTY14;ID=exon:HG002_chrY_T0001535:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19783446	19838999	.	-	.	source_transcript=ENST00000850202.1;source_transcript_name=TTTY14-236;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850202.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001535;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001535;transcript_name=HG002_chrY_T0001535;gene_name=TTTY14;ID=intron:HG002_chrY_T0001535:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19839000	19839098	.	-	.	source_transcript=ENST00000850202.1;source_transcript_name=TTTY14-236;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850202.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001535;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001535;transcript_name=HG002_chrY_T0001535;gene_name=TTTY14;ID=exon:HG002_chrY_T0001535:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839099	19982196	.	-	.	source_transcript=ENST00000850202.1;source_transcript_name=TTTY14-236;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850202.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001535;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001535;transcript_name=HG002_chrY_T0001535;gene_name=TTTY14;ID=intron:HG002_chrY_T0001535:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19982197	19982276	.	-	.	source_transcript=ENST00000850202.1;source_transcript_name=TTTY14-236;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850202.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001535;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001535;transcript_name=HG002_chrY_T0001535;gene_name=TTTY14;ID=exon:HG002_chrY_T0001535:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19778741	19983748	1000	-	.	source_transcript=ENST00000454875.3;source_transcript_name=TTTY14-205;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000454875.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000454875.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001536;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001536;gene_name=TTTY14;ID=HG002_chrY_T0001536;Name=TTTY14
HG002_chrY	CAT	exon	19778741	19779074	.	-	.	source_transcript=ENST00000454875.3;source_transcript_name=TTTY14-205;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000454875.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000454875.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001536;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001536;transcript_name=HG002_chrY_T0001536;gene_name=TTTY14;ID=exon:HG002_chrY_T0001536:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19779075	19783307	.	-	.	source_transcript=ENST00000454875.3;source_transcript_name=TTTY14-205;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000454875.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000454875.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001536;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001536;transcript_name=HG002_chrY_T0001536;gene_name=TTTY14;ID=intron:HG002_chrY_T0001536:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19783308	19783445	.	-	.	source_transcript=ENST00000454875.3;source_transcript_name=TTTY14-205;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000454875.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000454875.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001536;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001536;transcript_name=HG002_chrY_T0001536;gene_name=TTTY14;ID=exon:HG002_chrY_T0001536:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19783446	19983300	.	-	.	source_transcript=ENST00000454875.3;source_transcript_name=TTTY14-205;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000454875.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000454875.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001536;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001536;transcript_name=HG002_chrY_T0001536;gene_name=TTTY14;ID=intron:HG002_chrY_T0001536:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19983301	19983748	.	-	.	source_transcript=ENST00000454875.3;source_transcript_name=TTTY14-205;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000454875.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000454875.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001536;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001536;transcript_name=HG002_chrY_T0001536;gene_name=TTTY14;ID=exon:HG002_chrY_T0001536:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19778743	19982261	1000	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001537;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001537;gene_name=TTTY14;ID=HG002_chrY_T0001537;Name=TTTY14
HG002_chrY	CAT	exon	19778743	19779074	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001537;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001537;transcript_name=HG002_chrY_T0001537;gene_name=TTTY14;ID=exon:HG002_chrY_T0001537:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19779075	19783307	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001537;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001537;transcript_name=HG002_chrY_T0001537;gene_name=TTTY14;ID=intron:HG002_chrY_T0001537:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19783308	19783445	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001537;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001537;transcript_name=HG002_chrY_T0001537;gene_name=TTTY14;ID=exon:HG002_chrY_T0001537:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19783446	19818621	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001537;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001537;transcript_name=HG002_chrY_T0001537;gene_name=TTTY14;ID=intron:HG002_chrY_T0001537:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19818622	19818736	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001537;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001537;transcript_name=HG002_chrY_T0001537;gene_name=TTTY14;ID=exon:HG002_chrY_T0001537:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19818737	19838999	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001537;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001537;transcript_name=HG002_chrY_T0001537;gene_name=TTTY14;ID=intron:HG002_chrY_T0001537:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19839000	19839098	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001537;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001537;transcript_name=HG002_chrY_T0001537;gene_name=TTTY14;ID=exon:HG002_chrY_T0001537:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839099	19839613	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001537;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001537;transcript_name=HG002_chrY_T0001537;gene_name=TTTY14;ID=intron:HG002_chrY_T0001537:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19839614	19839732	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001537;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001537;transcript_name=HG002_chrY_T0001537;gene_name=TTTY14;ID=exon:HG002_chrY_T0001537:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839733	19947628	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001537;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001537;transcript_name=HG002_chrY_T0001537;gene_name=TTTY14;ID=intron:HG002_chrY_T0001537:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19947629	19947845	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001537;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001537;transcript_name=HG002_chrY_T0001537;gene_name=TTTY14;ID=exon:HG002_chrY_T0001537:5;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19947846	19974979	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001537;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001537;transcript_name=HG002_chrY_T0001537;gene_name=TTTY14;ID=intron:HG002_chrY_T0001537:5;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19974980	19975054	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001537;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001537;transcript_name=HG002_chrY_T0001537;gene_name=TTTY14;ID=exon:HG002_chrY_T0001537:6;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19975055	19982196	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001537;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001537;transcript_name=HG002_chrY_T0001537;gene_name=TTTY14;ID=intron:HG002_chrY_T0001537:6;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19982197	19982261	.	-	.	source_transcript=ENST00000850205.1;source_transcript_name=TTTY14-239;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001537;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001537;transcript_name=HG002_chrY_T0001537;gene_name=TTTY14;ID=exon:HG002_chrY_T0001537:7;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19778747	19982254	1000	-	.	source_transcript=ENST00000850206.1;source_transcript_name=TTTY14-240;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850206.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001538;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001538;gene_name=TTTY14;ID=HG002_chrY_T0001538;Name=TTTY14
HG002_chrY	CAT	exon	19778747	19779074	.	-	.	source_transcript=ENST00000850206.1;source_transcript_name=TTTY14-240;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850206.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001538;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001538;transcript_name=HG002_chrY_T0001538;gene_name=TTTY14;ID=exon:HG002_chrY_T0001538:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19779075	19838999	.	-	.	source_transcript=ENST00000850206.1;source_transcript_name=TTTY14-240;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850206.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001538;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001538;transcript_name=HG002_chrY_T0001538;gene_name=TTTY14;ID=intron:HG002_chrY_T0001538:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19839000	19839098	.	-	.	source_transcript=ENST00000850206.1;source_transcript_name=TTTY14-240;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850206.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001538;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001538;transcript_name=HG002_chrY_T0001538;gene_name=TTTY14;ID=exon:HG002_chrY_T0001538:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839099	19974979	.	-	.	source_transcript=ENST00000850206.1;source_transcript_name=TTTY14-240;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850206.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001538;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001538;transcript_name=HG002_chrY_T0001538;gene_name=TTTY14;ID=intron:HG002_chrY_T0001538:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19974980	19975054	.	-	.	source_transcript=ENST00000850206.1;source_transcript_name=TTTY14-240;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850206.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001538;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001538;transcript_name=HG002_chrY_T0001538;gene_name=TTTY14;ID=exon:HG002_chrY_T0001538:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19975055	19979754	.	-	.	source_transcript=ENST00000850206.1;source_transcript_name=TTTY14-240;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850206.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001538;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001538;transcript_name=HG002_chrY_T0001538;gene_name=TTTY14;ID=intron:HG002_chrY_T0001538:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19979755	19979817	.	-	.	source_transcript=ENST00000850206.1;source_transcript_name=TTTY14-240;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850206.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001538;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001538;transcript_name=HG002_chrY_T0001538;gene_name=TTTY14;ID=exon:HG002_chrY_T0001538:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19979818	19982196	.	-	.	source_transcript=ENST00000850206.1;source_transcript_name=TTTY14-240;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850206.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001538;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001538;transcript_name=HG002_chrY_T0001538;gene_name=TTTY14;ID=intron:HG002_chrY_T0001538:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19982197	19982254	.	-	.	source_transcript=ENST00000850206.1;source_transcript_name=TTTY14-240;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850206.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001538;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001538;transcript_name=HG002_chrY_T0001538;gene_name=TTTY14;ID=exon:HG002_chrY_T0001538:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19783380	19785654	1000	-	.	source_transcript=ENST00000658318.1;source_transcript_name=TTTY14-221;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658318.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658318.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001539;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001539;gene_name=TTTY14;ID=HG002_chrY_T0001539;Name=TTTY14
HG002_chrY	CAT	exon	19783380	19783445	.	-	.	source_transcript=ENST00000658318.1;source_transcript_name=TTTY14-221;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658318.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001539;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001539;transcript_name=HG002_chrY_T0001539;gene_name=TTTY14;ID=exon:HG002_chrY_T0001539:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19783446	19783609	.	-	.	source_transcript=ENST00000658318.1;source_transcript_name=TTTY14-221;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658318.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001539;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001539;transcript_name=HG002_chrY_T0001539;gene_name=TTTY14;ID=intron:HG002_chrY_T0001539:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19783610	19785654	.	-	.	source_transcript=ENST00000658318.1;source_transcript_name=TTTY14-221;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658318.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001539;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001539;transcript_name=HG002_chrY_T0001539;gene_name=TTTY14;ID=exon:HG002_chrY_T0001539:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19832785	19983621	1000	-	.	source_transcript=ENST00000656768.1;source_transcript_name=TTTY14-219;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656768.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001540;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001540;gene_name=TTTY14;ID=HG002_chrY_T0001540;Name=TTTY14
HG002_chrY	CAT	exon	19832785	19834630	.	-	.	source_transcript=ENST00000656768.1;source_transcript_name=TTTY14-219;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001540;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001540;transcript_name=HG002_chrY_T0001540;gene_name=TTTY14;ID=exon:HG002_chrY_T0001540:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19834631	19838999	.	-	.	source_transcript=ENST00000656768.1;source_transcript_name=TTTY14-219;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001540;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001540;transcript_name=HG002_chrY_T0001540;gene_name=TTTY14;ID=intron:HG002_chrY_T0001540:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19839000	19839098	.	-	.	source_transcript=ENST00000656768.1;source_transcript_name=TTTY14-219;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001540;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001540;transcript_name=HG002_chrY_T0001540;gene_name=TTTY14;ID=exon:HG002_chrY_T0001540:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839099	19983300	.	-	.	source_transcript=ENST00000656768.1;source_transcript_name=TTTY14-219;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001540;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001540;transcript_name=HG002_chrY_T0001540;gene_name=TTTY14;ID=intron:HG002_chrY_T0001540:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19983301	19983621	.	-	.	source_transcript=ENST00000656768.1;source_transcript_name=TTTY14-219;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001540;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001540;transcript_name=HG002_chrY_T0001540;gene_name=TTTY14;ID=exon:HG002_chrY_T0001540:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19834263	19982265	1000	-	.	source_transcript=ENST00000850210.1;source_transcript_name=TTTY14-244;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850210.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001541;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001541;gene_name=TTTY14;ID=HG002_chrY_T0001541;Name=TTTY14
HG002_chrY	CAT	exon	19834263	19834630	.	-	.	source_transcript=ENST00000850210.1;source_transcript_name=TTTY14-244;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850210.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001541;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001541;transcript_name=HG002_chrY_T0001541;gene_name=TTTY14;ID=exon:HG002_chrY_T0001541:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19834631	19838999	.	-	.	source_transcript=ENST00000850210.1;source_transcript_name=TTTY14-244;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850210.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001541;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001541;transcript_name=HG002_chrY_T0001541;gene_name=TTTY14;ID=intron:HG002_chrY_T0001541:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19839000	19839098	.	-	.	source_transcript=ENST00000850210.1;source_transcript_name=TTTY14-244;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850210.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001541;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001541;transcript_name=HG002_chrY_T0001541;gene_name=TTTY14;ID=exon:HG002_chrY_T0001541:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839099	19982196	.	-	.	source_transcript=ENST00000850210.1;source_transcript_name=TTTY14-244;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850210.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001541;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001541;transcript_name=HG002_chrY_T0001541;gene_name=TTTY14;ID=intron:HG002_chrY_T0001541:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19982197	19982265	.	-	.	source_transcript=ENST00000850210.1;source_transcript_name=TTTY14-244;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850210.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001541;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001541;transcript_name=HG002_chrY_T0001541;gene_name=TTTY14;ID=exon:HG002_chrY_T0001541:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19834324	19982263	1000	-	.	source_transcript=ENST00000850211.1;source_transcript_name=TTTY14-245;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850211.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001542;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001542;gene_name=TTTY14;ID=HG002_chrY_T0001542;Name=TTTY14
HG002_chrY	CAT	exon	19834324	19834630	.	-	.	source_transcript=ENST00000850211.1;source_transcript_name=TTTY14-245;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001542;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001542;transcript_name=HG002_chrY_T0001542;gene_name=TTTY14;ID=exon:HG002_chrY_T0001542:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19834631	19974979	.	-	.	source_transcript=ENST00000850211.1;source_transcript_name=TTTY14-245;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001542;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001542;transcript_name=HG002_chrY_T0001542;gene_name=TTTY14;ID=intron:HG002_chrY_T0001542:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19974980	19975054	.	-	.	source_transcript=ENST00000850211.1;source_transcript_name=TTTY14-245;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001542;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001542;transcript_name=HG002_chrY_T0001542;gene_name=TTTY14;ID=exon:HG002_chrY_T0001542:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19975055	19982196	.	-	.	source_transcript=ENST00000850211.1;source_transcript_name=TTTY14-245;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001542;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001542;transcript_name=HG002_chrY_T0001542;gene_name=TTTY14;ID=intron:HG002_chrY_T0001542:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19982197	19982263	.	-	.	source_transcript=ENST00000850211.1;source_transcript_name=TTTY14-245;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001542;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001542;transcript_name=HG002_chrY_T0001542;gene_name=TTTY14;ID=exon:HG002_chrY_T0001542:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19836728	19983639	1000	-	.	source_transcript=ENST00000651355.1;source_transcript_name=TTTY14-212;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651355.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651355.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001543;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001543;gene_name=TTTY14;ID=HG002_chrY_T0001543;Name=TTTY14
HG002_chrY	CAT	exon	19836728	19839098	.	-	.	source_transcript=ENST00000651355.1;source_transcript_name=TTTY14-212;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651355.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651355.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001543;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001543;transcript_name=HG002_chrY_T0001543;gene_name=TTTY14;ID=exon:HG002_chrY_T0001543:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839099	19974979	.	-	.	source_transcript=ENST00000651355.1;source_transcript_name=TTTY14-212;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651355.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651355.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001543;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001543;transcript_name=HG002_chrY_T0001543;gene_name=TTTY14;ID=intron:HG002_chrY_T0001543:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19974980	19975054	.	-	.	source_transcript=ENST00000651355.1;source_transcript_name=TTTY14-212;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651355.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651355.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001543;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001543;transcript_name=HG002_chrY_T0001543;gene_name=TTTY14;ID=exon:HG002_chrY_T0001543:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19975055	19979754	.	-	.	source_transcript=ENST00000651355.1;source_transcript_name=TTTY14-212;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651355.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651355.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001543;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001543;transcript_name=HG002_chrY_T0001543;gene_name=TTTY14;ID=intron:HG002_chrY_T0001543:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19979755	19979817	.	-	.	source_transcript=ENST00000651355.1;source_transcript_name=TTTY14-212;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651355.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651355.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001543;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001543;transcript_name=HG002_chrY_T0001543;gene_name=TTTY14;ID=exon:HG002_chrY_T0001543:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19979818	19983300	.	-	.	source_transcript=ENST00000651355.1;source_transcript_name=TTTY14-212;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651355.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651355.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001543;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001543;transcript_name=HG002_chrY_T0001543;gene_name=TTTY14;ID=intron:HG002_chrY_T0001543:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19983301	19983639	.	-	.	source_transcript=ENST00000651355.1;source_transcript_name=TTTY14-212;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651355.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651355.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001543;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001543;transcript_name=HG002_chrY_T0001543;gene_name=TTTY14;ID=exon:HG002_chrY_T0001543:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19838264	19982376	1000	-	.	source_transcript=ENST00000669869.2;source_transcript_name=TTTY14-231;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669869.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000669869.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001544;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001544;gene_name=TTTY14;ID=HG002_chrY_T0001544;Name=TTTY14
HG002_chrY	CAT	exon	19838264	19839098	.	-	.	source_transcript=ENST00000669869.2;source_transcript_name=TTTY14-231;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669869.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000669869.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001544;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001544;transcript_name=HG002_chrY_T0001544;gene_name=TTTY14;ID=exon:HG002_chrY_T0001544:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839099	19974979	.	-	.	source_transcript=ENST00000669869.2;source_transcript_name=TTTY14-231;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669869.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000669869.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001544;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001544;transcript_name=HG002_chrY_T0001544;gene_name=TTTY14;ID=intron:HG002_chrY_T0001544:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19974980	19975054	.	-	.	source_transcript=ENST00000669869.2;source_transcript_name=TTTY14-231;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669869.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000669869.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001544;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001544;transcript_name=HG002_chrY_T0001544;gene_name=TTTY14;ID=exon:HG002_chrY_T0001544:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19975055	19982196	.	-	.	source_transcript=ENST00000669869.2;source_transcript_name=TTTY14-231;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669869.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000669869.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001544;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001544;transcript_name=HG002_chrY_T0001544;gene_name=TTTY14;ID=intron:HG002_chrY_T0001544:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19982197	19982376	.	-	.	source_transcript=ENST00000669869.2;source_transcript_name=TTTY14-231;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000669869.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000669869.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001544;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001544;transcript_name=HG002_chrY_T0001544;gene_name=TTTY14;ID=exon:HG002_chrY_T0001544:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19838574	19982252	1000	-	.	source_transcript=ENST00000452584.5;source_transcript_name=TTTY14-204;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452584.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452584.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001545;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001545;gene_name=TTTY14;ID=HG002_chrY_T0001545;Name=TTTY14
HG002_chrY	CAT	exon	19838574	19839098	.	-	.	source_transcript=ENST00000452584.5;source_transcript_name=TTTY14-204;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452584.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452584.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001545;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001545;transcript_name=HG002_chrY_T0001545;gene_name=TTTY14;ID=exon:HG002_chrY_T0001545:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839099	19950800	.	-	.	source_transcript=ENST00000452584.5;source_transcript_name=TTTY14-204;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452584.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452584.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001545;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001545;transcript_name=HG002_chrY_T0001545;gene_name=TTTY14;ID=intron:HG002_chrY_T0001545:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19950801	19950954	.	-	.	source_transcript=ENST00000452584.5;source_transcript_name=TTTY14-204;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452584.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452584.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001545;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001545;transcript_name=HG002_chrY_T0001545;gene_name=TTTY14;ID=exon:HG002_chrY_T0001545:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19950955	19951500	.	-	.	source_transcript=ENST00000452584.5;source_transcript_name=TTTY14-204;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452584.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452584.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001545;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001545;transcript_name=HG002_chrY_T0001545;gene_name=TTTY14;ID=intron:HG002_chrY_T0001545:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19951501	19951550	.	-	.	source_transcript=ENST00000452584.5;source_transcript_name=TTTY14-204;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452584.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452584.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001545;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001545;transcript_name=HG002_chrY_T0001545;gene_name=TTTY14;ID=exon:HG002_chrY_T0001545:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19951551	19974979	.	-	.	source_transcript=ENST00000452584.5;source_transcript_name=TTTY14-204;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452584.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452584.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001545;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001545;transcript_name=HG002_chrY_T0001545;gene_name=TTTY14;ID=intron:HG002_chrY_T0001545:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19974980	19975054	.	-	.	source_transcript=ENST00000452584.5;source_transcript_name=TTTY14-204;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452584.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452584.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001545;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001545;transcript_name=HG002_chrY_T0001545;gene_name=TTTY14;ID=exon:HG002_chrY_T0001545:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19975055	19982196	.	-	.	source_transcript=ENST00000452584.5;source_transcript_name=TTTY14-204;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452584.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452584.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001545;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001545;transcript_name=HG002_chrY_T0001545;gene_name=TTTY14;ID=intron:HG002_chrY_T0001545:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19982197	19982252	.	-	.	source_transcript=ENST00000452584.5;source_transcript_name=TTTY14-204;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452584.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452584.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001545;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001545;transcript_name=HG002_chrY_T0001545;gene_name=TTTY14;ID=exon:HG002_chrY_T0001545:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19838693	19982263	1000	-	.	source_transcript=ENST00000850216.1;source_transcript_name=TTTY14-250;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850216.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001546;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001546;gene_name=TTTY14;ID=HG002_chrY_T0001546;Name=TTTY14
HG002_chrY	CAT	exon	19838693	19839098	.	-	.	source_transcript=ENST00000850216.1;source_transcript_name=TTTY14-250;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850216.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001546;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001546;transcript_name=HG002_chrY_T0001546;gene_name=TTTY14;ID=exon:HG002_chrY_T0001546:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839099	19839613	.	-	.	source_transcript=ENST00000850216.1;source_transcript_name=TTTY14-250;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850216.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001546;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001546;transcript_name=HG002_chrY_T0001546;gene_name=TTTY14;ID=intron:HG002_chrY_T0001546:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19839614	19839732	.	-	.	source_transcript=ENST00000850216.1;source_transcript_name=TTTY14-250;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850216.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001546;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001546;transcript_name=HG002_chrY_T0001546;gene_name=TTTY14;ID=exon:HG002_chrY_T0001546:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839733	19974979	.	-	.	source_transcript=ENST00000850216.1;source_transcript_name=TTTY14-250;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850216.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001546;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001546;transcript_name=HG002_chrY_T0001546;gene_name=TTTY14;ID=intron:HG002_chrY_T0001546:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19974980	19975054	.	-	.	source_transcript=ENST00000850216.1;source_transcript_name=TTTY14-250;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850216.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001546;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001546;transcript_name=HG002_chrY_T0001546;gene_name=TTTY14;ID=exon:HG002_chrY_T0001546:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19975055	19982196	.	-	.	source_transcript=ENST00000850216.1;source_transcript_name=TTTY14-250;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850216.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001546;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001546;transcript_name=HG002_chrY_T0001546;gene_name=TTTY14;ID=intron:HG002_chrY_T0001546:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19982197	19982263	.	-	.	source_transcript=ENST00000850216.1;source_transcript_name=TTTY14-250;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850216.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001546;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001546;transcript_name=HG002_chrY_T0001546;gene_name=TTTY14;ID=exon:HG002_chrY_T0001546:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19838693	19962291	1000	-	.	source_transcript=ENST00000850220.1;source_transcript_name=TTTY14-254;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850220.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001547;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001547;gene_name=TTTY14;ID=HG002_chrY_T0001547;Name=TTTY14
HG002_chrY	CAT	exon	19838693	19839098	.	-	.	source_transcript=ENST00000850220.1;source_transcript_name=TTTY14-254;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850220.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001547;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001547;transcript_name=HG002_chrY_T0001547;gene_name=TTTY14;ID=exon:HG002_chrY_T0001547:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839099	19962133	.	-	.	source_transcript=ENST00000850220.1;source_transcript_name=TTTY14-254;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850220.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001547;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001547;transcript_name=HG002_chrY_T0001547;gene_name=TTTY14;ID=intron:HG002_chrY_T0001547:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19962134	19962291	.	-	.	source_transcript=ENST00000850220.1;source_transcript_name=TTTY14-254;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850220.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001547;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001547;transcript_name=HG002_chrY_T0001547;gene_name=TTTY14;ID=exon:HG002_chrY_T0001547:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19838693	19982267	1000	-	.	source_transcript=ENST00000651286.1;source_transcript_name=TTTY14-211;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651286.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001548;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001548;gene_name=TTTY14;ID=HG002_chrY_T0001548;Name=TTTY14
HG002_chrY	CAT	exon	19838693	19839098	.	-	.	source_transcript=ENST00000651286.1;source_transcript_name=TTTY14-211;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651286.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001548;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001548;transcript_name=HG002_chrY_T0001548;gene_name=TTTY14;ID=exon:HG002_chrY_T0001548:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839099	19974979	.	-	.	source_transcript=ENST00000651286.1;source_transcript_name=TTTY14-211;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651286.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001548;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001548;transcript_name=HG002_chrY_T0001548;gene_name=TTTY14;ID=intron:HG002_chrY_T0001548:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19974980	19975054	.	-	.	source_transcript=ENST00000651286.1;source_transcript_name=TTTY14-211;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651286.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001548;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001548;transcript_name=HG002_chrY_T0001548;gene_name=TTTY14;ID=exon:HG002_chrY_T0001548:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19975055	19979754	.	-	.	source_transcript=ENST00000651286.1;source_transcript_name=TTTY14-211;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651286.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001548;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001548;transcript_name=HG002_chrY_T0001548;gene_name=TTTY14;ID=intron:HG002_chrY_T0001548:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19979755	19979817	.	-	.	source_transcript=ENST00000651286.1;source_transcript_name=TTTY14-211;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651286.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001548;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001548;transcript_name=HG002_chrY_T0001548;gene_name=TTTY14;ID=exon:HG002_chrY_T0001548:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19979818	19982196	.	-	.	source_transcript=ENST00000651286.1;source_transcript_name=TTTY14-211;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651286.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001548;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001548;transcript_name=HG002_chrY_T0001548;gene_name=TTTY14;ID=intron:HG002_chrY_T0001548:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19982197	19982267	.	-	.	source_transcript=ENST00000651286.1;source_transcript_name=TTTY14-211;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651286.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001548;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001548;transcript_name=HG002_chrY_T0001548;gene_name=TTTY14;ID=exon:HG002_chrY_T0001548:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19838693	19982272	1000	-	.	source_transcript=ENST00000850215.1;source_transcript_name=TTTY14-249;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850215.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001549;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001549;gene_name=TTTY14;ID=HG002_chrY_T0001549;Name=TTTY14
HG002_chrY	CAT	exon	19838693	19839098	.	-	.	source_transcript=ENST00000850215.1;source_transcript_name=TTTY14-249;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001549;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001549;transcript_name=HG002_chrY_T0001549;gene_name=TTTY14;ID=exon:HG002_chrY_T0001549:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839099	19839613	.	-	.	source_transcript=ENST00000850215.1;source_transcript_name=TTTY14-249;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001549;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001549;transcript_name=HG002_chrY_T0001549;gene_name=TTTY14;ID=intron:HG002_chrY_T0001549:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19839614	19839732	.	-	.	source_transcript=ENST00000850215.1;source_transcript_name=TTTY14-249;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001549;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001549;transcript_name=HG002_chrY_T0001549;gene_name=TTTY14;ID=exon:HG002_chrY_T0001549:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839733	19982196	.	-	.	source_transcript=ENST00000850215.1;source_transcript_name=TTTY14-249;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001549;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001549;transcript_name=HG002_chrY_T0001549;gene_name=TTTY14;ID=intron:HG002_chrY_T0001549:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19982197	19982272	.	-	.	source_transcript=ENST00000850215.1;source_transcript_name=TTTY14-249;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001549;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001549;transcript_name=HG002_chrY_T0001549;gene_name=TTTY14;ID=exon:HG002_chrY_T0001549:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19838693	19983693	1000	-	.	source_transcript=ENST00000667617.2;source_transcript_name=TTTY14-228;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667617.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667617.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001550;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001550;gene_name=TTTY14;ID=HG002_chrY_T0001550;Name=TTTY14
HG002_chrY	CAT	exon	19838693	19839098	.	-	.	source_transcript=ENST00000667617.2;source_transcript_name=TTTY14-228;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667617.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667617.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001550;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001550;transcript_name=HG002_chrY_T0001550;gene_name=TTTY14;ID=exon:HG002_chrY_T0001550:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839099	19974979	.	-	.	source_transcript=ENST00000667617.2;source_transcript_name=TTTY14-228;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667617.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667617.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001550;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001550;transcript_name=HG002_chrY_T0001550;gene_name=TTTY14;ID=intron:HG002_chrY_T0001550:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19974980	19975054	.	-	.	source_transcript=ENST00000667617.2;source_transcript_name=TTTY14-228;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667617.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667617.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001550;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001550;transcript_name=HG002_chrY_T0001550;gene_name=TTTY14;ID=exon:HG002_chrY_T0001550:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19975055	19983523	.	-	.	source_transcript=ENST00000667617.2;source_transcript_name=TTTY14-228;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667617.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667617.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001550;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001550;transcript_name=HG002_chrY_T0001550;gene_name=TTTY14;ID=intron:HG002_chrY_T0001550:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19983524	19983693	.	-	.	source_transcript=ENST00000667617.2;source_transcript_name=TTTY14-228;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667617.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000667617.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001550;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001550;transcript_name=HG002_chrY_T0001550;gene_name=TTTY14;ID=exon:HG002_chrY_T0001550:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19838693	19983811	1000	-	.	source_transcript=ENST00000850212.1;source_transcript_name=TTTY14-246;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850212.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001551;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001551;gene_name=TTTY14;ID=HG002_chrY_T0001551;Name=TTTY14
HG002_chrY	CAT	exon	19838693	19839098	.	-	.	source_transcript=ENST00000850212.1;source_transcript_name=TTTY14-246;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850212.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001551;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001551;transcript_name=HG002_chrY_T0001551;gene_name=TTTY14;ID=exon:HG002_chrY_T0001551:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839099	19983523	.	-	.	source_transcript=ENST00000850212.1;source_transcript_name=TTTY14-246;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850212.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001551;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001551;transcript_name=HG002_chrY_T0001551;gene_name=TTTY14;ID=intron:HG002_chrY_T0001551:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19983524	19983811	.	-	.	source_transcript=ENST00000850212.1;source_transcript_name=TTTY14-246;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850212.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001551;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001551;transcript_name=HG002_chrY_T0001551;gene_name=TTTY14;ID=exon:HG002_chrY_T0001551:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19838951	19962494	1000	-	.	source_transcript=ENST00000850221.1;source_transcript_name=TTTY14-255;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850221.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001552;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001552;gene_name=TTTY14;ID=HG002_chrY_T0001552;Name=TTTY14
HG002_chrY	CAT	exon	19838951	19839098	.	-	.	source_transcript=ENST00000850221.1;source_transcript_name=TTTY14-255;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001552;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001552;transcript_name=HG002_chrY_T0001552;gene_name=TTTY14;ID=exon:HG002_chrY_T0001552:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839099	19962223	.	-	.	source_transcript=ENST00000850221.1;source_transcript_name=TTTY14-255;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001552;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001552;transcript_name=HG002_chrY_T0001552;gene_name=TTTY14;ID=intron:HG002_chrY_T0001552:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19962224	19962494	.	-	.	source_transcript=ENST00000850221.1;source_transcript_name=TTTY14-255;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001552;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001552;transcript_name=HG002_chrY_T0001552;gene_name=TTTY14;ID=exon:HG002_chrY_T0001552:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19838953	19983384	1000	-	.	source_transcript=ENST00000850213.1;source_transcript_name=TTTY14-247;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850213.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001553;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001553;gene_name=TTTY14;ID=HG002_chrY_T0001553;Name=TTTY14
HG002_chrY	CAT	exon	19838953	19839098	.	-	.	source_transcript=ENST00000850213.1;source_transcript_name=TTTY14-247;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001553;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001553;transcript_name=HG002_chrY_T0001553;gene_name=TTTY14;ID=exon:HG002_chrY_T0001553:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839099	19974979	.	-	.	source_transcript=ENST00000850213.1;source_transcript_name=TTTY14-247;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001553;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001553;transcript_name=HG002_chrY_T0001553;gene_name=TTTY14;ID=intron:HG002_chrY_T0001553:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19974980	19975054	.	-	.	source_transcript=ENST00000850213.1;source_transcript_name=TTTY14-247;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001553;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001553;transcript_name=HG002_chrY_T0001553;gene_name=TTTY14;ID=exon:HG002_chrY_T0001553:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19975055	19983300	.	-	.	source_transcript=ENST00000850213.1;source_transcript_name=TTTY14-247;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001553;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001553;transcript_name=HG002_chrY_T0001553;gene_name=TTTY14;ID=intron:HG002_chrY_T0001553:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19983301	19983384	.	-	.	source_transcript=ENST00000850213.1;source_transcript_name=TTTY14-247;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001553;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001553;transcript_name=HG002_chrY_T0001553;gene_name=TTTY14;ID=exon:HG002_chrY_T0001553:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19838953	19983672	1000	-	.	source_transcript=ENST00000331787.3;source_transcript_name=TTTY14-202;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000331787.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000331787.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001554;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001554;gene_name=TTTY14;ID=HG002_chrY_T0001554;Name=TTTY14
HG002_chrY	CAT	exon	19838953	19839098	.	-	.	source_transcript=ENST00000331787.3;source_transcript_name=TTTY14-202;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000331787.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000331787.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001554;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001554;transcript_name=HG002_chrY_T0001554;gene_name=TTTY14;ID=exon:HG002_chrY_T0001554:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839099	19983300	.	-	.	source_transcript=ENST00000331787.3;source_transcript_name=TTTY14-202;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000331787.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000331787.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001554;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001554;transcript_name=HG002_chrY_T0001554;gene_name=TTTY14;ID=intron:HG002_chrY_T0001554:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19983301	19983672	.	-	.	source_transcript=ENST00000331787.3;source_transcript_name=TTTY14-202;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000331787.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000331787.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001554;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001554;transcript_name=HG002_chrY_T0001554;gene_name=TTTY14;ID=exon:HG002_chrY_T0001554:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19838956	19982261	1000	-	.	source_transcript=ENST00000850218.1;source_transcript_name=TTTY14-252;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850218.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001555;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001555;gene_name=TTTY14;ID=HG002_chrY_T0001555;Name=TTTY14
HG002_chrY	CAT	exon	19838956	19839098	.	-	.	source_transcript=ENST00000850218.1;source_transcript_name=TTTY14-252;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850218.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001555;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001555;transcript_name=HG002_chrY_T0001555;gene_name=TTTY14;ID=exon:HG002_chrY_T0001555:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839099	19888979	.	-	.	source_transcript=ENST00000850218.1;source_transcript_name=TTTY14-252;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850218.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001555;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001555;transcript_name=HG002_chrY_T0001555;gene_name=TTTY14;ID=intron:HG002_chrY_T0001555:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19888980	19889103	.	-	.	source_transcript=ENST00000850218.1;source_transcript_name=TTTY14-252;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850218.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001555;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001555;transcript_name=HG002_chrY_T0001555;gene_name=TTTY14;ID=exon:HG002_chrY_T0001555:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19889104	19974979	.	-	.	source_transcript=ENST00000850218.1;source_transcript_name=TTTY14-252;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850218.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001555;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001555;transcript_name=HG002_chrY_T0001555;gene_name=TTTY14;ID=intron:HG002_chrY_T0001555:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19974980	19975054	.	-	.	source_transcript=ENST00000850218.1;source_transcript_name=TTTY14-252;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850218.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001555;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001555;transcript_name=HG002_chrY_T0001555;gene_name=TTTY14;ID=exon:HG002_chrY_T0001555:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19975055	19982196	.	-	.	source_transcript=ENST00000850218.1;source_transcript_name=TTTY14-252;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850218.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001555;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001555;transcript_name=HG002_chrY_T0001555;gene_name=TTTY14;ID=intron:HG002_chrY_T0001555:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19982197	19982261	.	-	.	source_transcript=ENST00000850218.1;source_transcript_name=TTTY14-252;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850218.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001555;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001555;transcript_name=HG002_chrY_T0001555;gene_name=TTTY14;ID=exon:HG002_chrY_T0001555:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19838956	19983363	1000	-	.	source_transcript=ENST00000850214.1;source_transcript_name=TTTY14-248;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850214.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001556;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001556;gene_name=TTTY14;ID=HG002_chrY_T0001556;Name=TTTY14
HG002_chrY	CAT	exon	19838956	19839098	.	-	.	source_transcript=ENST00000850214.1;source_transcript_name=TTTY14-248;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850214.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001556;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001556;transcript_name=HG002_chrY_T0001556;gene_name=TTTY14;ID=exon:HG002_chrY_T0001556:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839099	19848690	.	-	.	source_transcript=ENST00000850214.1;source_transcript_name=TTTY14-248;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850214.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001556;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001556;transcript_name=HG002_chrY_T0001556;gene_name=TTTY14;ID=intron:HG002_chrY_T0001556:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19848691	19848803	.	-	.	source_transcript=ENST00000850214.1;source_transcript_name=TTTY14-248;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850214.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001556;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001556;transcript_name=HG002_chrY_T0001556;gene_name=TTTY14;ID=exon:HG002_chrY_T0001556:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19848804	19983300	.	-	.	source_transcript=ENST00000850214.1;source_transcript_name=TTTY14-248;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850214.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001556;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001556;transcript_name=HG002_chrY_T0001556;gene_name=TTTY14;ID=intron:HG002_chrY_T0001556:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19983301	19983363	.	-	.	source_transcript=ENST00000850214.1;source_transcript_name=TTTY14-248;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850214.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001556;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001556;transcript_name=HG002_chrY_T0001556;gene_name=TTTY14;ID=exon:HG002_chrY_T0001556:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19838956	19962241	1000	-	.	source_transcript=ENST00000850222.1;source_transcript_name=TTTY14-256;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850222.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001557;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001557;gene_name=TTTY14;ID=HG002_chrY_T0001557;Name=TTTY14
HG002_chrY	CAT	exon	19838956	19839098	.	-	.	source_transcript=ENST00000850222.1;source_transcript_name=TTTY14-256;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850222.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001557;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001557;transcript_name=HG002_chrY_T0001557;gene_name=TTTY14;ID=exon:HG002_chrY_T0001557:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839099	19839613	.	-	.	source_transcript=ENST00000850222.1;source_transcript_name=TTTY14-256;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850222.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001557;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001557;transcript_name=HG002_chrY_T0001557;gene_name=TTTY14;ID=intron:HG002_chrY_T0001557:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19839614	19839732	.	-	.	source_transcript=ENST00000850222.1;source_transcript_name=TTTY14-256;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850222.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001557;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001557;transcript_name=HG002_chrY_T0001557;gene_name=TTTY14;ID=exon:HG002_chrY_T0001557:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839733	19962133	.	-	.	source_transcript=ENST00000850222.1;source_transcript_name=TTTY14-256;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850222.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001557;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001557;transcript_name=HG002_chrY_T0001557;gene_name=TTTY14;ID=intron:HG002_chrY_T0001557:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19962134	19962241	.	-	.	source_transcript=ENST00000850222.1;source_transcript_name=TTTY14-256;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850222.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001557;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001557;transcript_name=HG002_chrY_T0001557;gene_name=TTTY14;ID=exon:HG002_chrY_T0001557:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19838956	19982261	1000	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001558;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001558;gene_name=TTTY14;ID=HG002_chrY_T0001558;Name=TTTY14
HG002_chrY	CAT	exon	19838956	19839098	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001558;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001558;transcript_name=HG002_chrY_T0001558;gene_name=TTTY14;ID=exon:HG002_chrY_T0001558:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839099	19947628	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001558;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001558;transcript_name=HG002_chrY_T0001558;gene_name=TTTY14;ID=intron:HG002_chrY_T0001558:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19947629	19947845	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001558;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001558;transcript_name=HG002_chrY_T0001558;gene_name=TTTY14;ID=exon:HG002_chrY_T0001558:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19947846	19949421	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001558;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001558;transcript_name=HG002_chrY_T0001558;gene_name=TTTY14;ID=intron:HG002_chrY_T0001558:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19949422	19949605	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001558;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001558;transcript_name=HG002_chrY_T0001558;gene_name=TTTY14;ID=exon:HG002_chrY_T0001558:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19949606	19950800	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001558;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001558;transcript_name=HG002_chrY_T0001558;gene_name=TTTY14;ID=intron:HG002_chrY_T0001558:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19950801	19950954	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001558;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001558;transcript_name=HG002_chrY_T0001558;gene_name=TTTY14;ID=exon:HG002_chrY_T0001558:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19950955	19974979	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001558;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001558;transcript_name=HG002_chrY_T0001558;gene_name=TTTY14;ID=intron:HG002_chrY_T0001558:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19974980	19975054	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001558;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001558;transcript_name=HG002_chrY_T0001558;gene_name=TTTY14;ID=exon:HG002_chrY_T0001558:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19975055	19982196	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001558;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001558;transcript_name=HG002_chrY_T0001558;gene_name=TTTY14;ID=intron:HG002_chrY_T0001558:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19982197	19982261	.	-	.	source_transcript=ENST00000850219.1;source_transcript_name=TTTY14-253;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001558;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001558;transcript_name=HG002_chrY_T0001558;gene_name=TTTY14;ID=exon:HG002_chrY_T0001558:5;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19838956	19982264	1000	-	.	source_transcript=ENST00000850217.1;source_transcript_name=TTTY14-251;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850217.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001559;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001559;gene_name=TTTY14;ID=HG002_chrY_T0001559;Name=TTTY14
HG002_chrY	CAT	exon	19838956	19839098	.	-	.	source_transcript=ENST00000850217.1;source_transcript_name=TTTY14-251;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001559;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001559;transcript_name=HG002_chrY_T0001559;gene_name=TTTY14;ID=exon:HG002_chrY_T0001559:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19839099	19982196	.	-	.	source_transcript=ENST00000850217.1;source_transcript_name=TTTY14-251;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001559;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001559;transcript_name=HG002_chrY_T0001559;gene_name=TTTY14;ID=intron:HG002_chrY_T0001559:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19982197	19982264	.	-	.	source_transcript=ENST00000850217.1;source_transcript_name=TTTY14-251;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001559;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001559;transcript_name=HG002_chrY_T0001559;gene_name=TTTY14;ID=exon:HG002_chrY_T0001559:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19946499	19950925	1000	-	.	source_transcript=ENST00000667450.1;source_transcript_name=TTTY14-227;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667450.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667450.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001563;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001563;gene_name=TTTY14;ID=HG002_chrY_T0001563;Name=TTTY14
HG002_chrY	CAT	exon	19946499	19949605	.	-	.	source_transcript=ENST00000667450.1;source_transcript_name=TTTY14-227;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667450.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667450.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001563;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001563;transcript_name=HG002_chrY_T0001563;gene_name=TTTY14;ID=exon:HG002_chrY_T0001563:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19949606	19950800	.	-	.	source_transcript=ENST00000667450.1;source_transcript_name=TTTY14-227;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667450.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667450.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001563;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001563;transcript_name=HG002_chrY_T0001563;gene_name=TTTY14;ID=intron:HG002_chrY_T0001563:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19950801	19950925	.	-	.	source_transcript=ENST00000667450.1;source_transcript_name=TTTY14-227;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667450.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667450.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001563;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001563;transcript_name=HG002_chrY_T0001563;gene_name=TTTY14;ID=exon:HG002_chrY_T0001563:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19947757	19983651	1000	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001564;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001564;gene_name=TTTY14;ID=HG002_chrY_T0001564;Name=TTTY14
HG002_chrY	CAT	exon	19947757	19947845	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001564;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001564;transcript_name=HG002_chrY_T0001564;gene_name=TTTY14;ID=exon:HG002_chrY_T0001564:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19947846	19949421	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001564;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001564;transcript_name=HG002_chrY_T0001564;gene_name=TTTY14;ID=intron:HG002_chrY_T0001564:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19949422	19949605	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001564;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001564;transcript_name=HG002_chrY_T0001564;gene_name=TTTY14;ID=exon:HG002_chrY_T0001564:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19949606	19950920	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001564;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001564;transcript_name=HG002_chrY_T0001564;gene_name=TTTY14;ID=intron:HG002_chrY_T0001564:1;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19950921	19950954	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001564;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001564;transcript_name=HG002_chrY_T0001564;gene_name=TTTY14;ID=exon:HG002_chrY_T0001564:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19950955	19951500	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001564;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001564;transcript_name=HG002_chrY_T0001564;gene_name=TTTY14;ID=intron:HG002_chrY_T0001564:2;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19951501	19951547	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001564;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001564;transcript_name=HG002_chrY_T0001564;gene_name=TTTY14;ID=exon:HG002_chrY_T0001564:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19951548	19955031	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001564;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001564;transcript_name=HG002_chrY_T0001564;gene_name=TTTY14;ID=intron:HG002_chrY_T0001564:3;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19955032	19955171	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001564;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001564;transcript_name=HG002_chrY_T0001564;gene_name=TTTY14;ID=exon:HG002_chrY_T0001564:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19955172	19974979	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001564;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001564;transcript_name=HG002_chrY_T0001564;gene_name=TTTY14;ID=intron:HG002_chrY_T0001564:4;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19974980	19975054	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001564;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001564;transcript_name=HG002_chrY_T0001564;gene_name=TTTY14;ID=exon:HG002_chrY_T0001564:5;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19975055	19983300	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001564;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001564;transcript_name=HG002_chrY_T0001564;gene_name=TTTY14;ID=intron:HG002_chrY_T0001564:5;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19983301	19983651	.	-	.	source_transcript=ENST00000447937.1;source_transcript_name=TTTY14-203;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447937.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447937.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001564;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001564;transcript_name=HG002_chrY_T0001564;gene_name=TTTY14;ID=exon:HG002_chrY_T0001564:6;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19983202	19983672	1000	-	.	source_transcript=ENST00000610801.1;source_transcript_name=TTTY14-207;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000610801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000610801.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001567;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_G0000521;transcript_name=HG002_chrY_T0001567;gene_name=TTTY14;ID=HG002_chrY_T0001567;Name=TTTY14
HG002_chrY	CAT	exon	19983202	19983672	.	-	.	source_transcript=ENST00000610801.1;source_transcript_name=TTTY14-207;source_gene=ENSG00000176728.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000176728.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000610801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000610801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;transcript_id=HG002_chrY_T0001567;gene_id=HG002_chrY_G0000521;Parent=HG002_chrY_T0001567;transcript_name=HG002_chrY_T0001567;gene_name=TTTY14;ID=exon:HG002_chrY_T0001567:0;Name=TTTY14;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19682513	19685661	.	-	.	source_gene_common_name=USP9YP2;source_gene=ENSG00000249501.1;alternative_source_transcripts=ENST00000504503.1,ENST00000504503.1;gene_id=HG002_chrY_G0000522;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP2;gene_sources=liftoff;ID=HG002_chrY_G0000522;Name=USP9YP2
HG002_chrY	CAT	transcript	19682513	19685661	1000	-	.	source_transcript=ENST00000504503.1;source_transcript_name=USP9YP2-201;source_gene=ENSG00000249501.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249501.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000504503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000504503.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP2;alternative_source_transcripts=ENST00000504503.1,ENST00000504503.1;transcript_id=HG002_chrY_T0001503;gene_id=HG002_chrY_G0000522;Parent=HG002_chrY_G0000522;transcript_name=HG002_chrY_T0001503;gene_name=USP9YP2;ID=HG002_chrY_T0001503;Name=USP9YP2
HG002_chrY	CAT	exon	19682513	19682637	.	-	.	source_transcript=ENST00000504503.1;source_transcript_name=USP9YP2-201;source_gene=ENSG00000249501.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249501.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000504503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000504503.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP2;alternative_source_transcripts=ENST00000504503.1,ENST00000504503.1;transcript_id=HG002_chrY_T0001503;gene_id=HG002_chrY_G0000522;Parent=HG002_chrY_T0001503;transcript_name=HG002_chrY_T0001503;gene_name=USP9YP2;ID=exon:HG002_chrY_T0001503:0;Name=USP9YP2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19682638	19683049	.	-	.	source_transcript=ENST00000504503.1;source_transcript_name=USP9YP2-201;source_gene=ENSG00000249501.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249501.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000504503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000504503.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP2;alternative_source_transcripts=ENST00000504503.1,ENST00000504503.1;transcript_id=HG002_chrY_T0001503;gene_id=HG002_chrY_G0000522;Parent=HG002_chrY_T0001503;transcript_name=HG002_chrY_T0001503;gene_name=USP9YP2;ID=intron:HG002_chrY_T0001503:0;Name=USP9YP2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19683050	19683795	.	-	.	source_transcript=ENST00000504503.1;source_transcript_name=USP9YP2-201;source_gene=ENSG00000249501.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249501.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000504503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000504503.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP2;alternative_source_transcripts=ENST00000504503.1,ENST00000504503.1;transcript_id=HG002_chrY_T0001503;gene_id=HG002_chrY_G0000522;Parent=HG002_chrY_T0001503;transcript_name=HG002_chrY_T0001503;gene_name=USP9YP2;ID=exon:HG002_chrY_T0001503:1;Name=USP9YP2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19683796	19685532	.	-	.	source_transcript=ENST00000504503.1;source_transcript_name=USP9YP2-201;source_gene=ENSG00000249501.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249501.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000504503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000504503.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP2;alternative_source_transcripts=ENST00000504503.1,ENST00000504503.1;transcript_id=HG002_chrY_T0001503;gene_id=HG002_chrY_G0000522;Parent=HG002_chrY_T0001503;transcript_name=HG002_chrY_T0001503;gene_name=USP9YP2;ID=intron:HG002_chrY_T0001503:1;Name=USP9YP2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19685533	19685661	.	-	.	source_transcript=ENST00000504503.1;source_transcript_name=USP9YP2-201;source_gene=ENSG00000249501.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249501.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000504503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000504503.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP2;alternative_source_transcripts=ENST00000504503.1,ENST00000504503.1;transcript_id=HG002_chrY_T0001503;gene_id=HG002_chrY_G0000522;Parent=HG002_chrY_T0001503;transcript_name=HG002_chrY_T0001503;gene_name=USP9YP2;ID=exon:HG002_chrY_T0001503:2;Name=USP9YP2;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19693985	19694315	.	+	.	source_gene_common_name=ELOCP14;source_gene=ENSG00000228193.1;alternative_source_transcripts=ENST00000428070.1,ENST00000428070.1;gene_id=HG002_chrY_G0000523;gene_biotype=processed_pseudogene;gene_name=ELOCP14;gene_sources=liftoff;ID=HG002_chrY_G0000523;Name=ELOCP14
HG002_chrY	CAT	transcript	19693985	19694315	1000	+	.	source_transcript=ENST00000428070.1;source_transcript_name=ELOCP14-201;source_gene=ENSG00000228193.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228193.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428070.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428070.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP14;alternative_source_transcripts=ENST00000428070.1,ENST00000428070.1;transcript_id=HG002_chrY_T0001504;gene_id=HG002_chrY_G0000523;Parent=HG002_chrY_G0000523;transcript_name=HG002_chrY_T0001504;gene_name=ELOCP14;ID=HG002_chrY_T0001504;Name=ELOCP14
HG002_chrY	CAT	exon	19693985	19694315	.	+	.	source_transcript=ENST00000428070.1;source_transcript_name=ELOCP14-201;source_gene=ENSG00000228193.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228193.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428070.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428070.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP14;alternative_source_transcripts=ENST00000428070.1,ENST00000428070.1;transcript_id=HG002_chrY_T0001504;gene_id=HG002_chrY_G0000523;Parent=HG002_chrY_T0001504;transcript_name=HG002_chrY_T0001504;gene_name=ELOCP14;ID=exon:HG002_chrY_T0001504:0;Name=ELOCP14;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19717574	19718065	.	-	.	source_gene_common_name=XKRYP2;source_gene=ENSG00000230904.1;alternative_source_transcripts=ENST00000432915.1,ENST00000432915.1;gene_id=HG002_chrY_G0000524;gene_biotype=unprocessed_pseudogene;gene_name=XKRYP2;gene_sources=liftoff;ID=HG002_chrY_G0000524;Name=XKRYP2
HG002_chrY	CAT	transcript	19717574	19718065	1000	-	.	source_transcript=ENST00000432915.1;source_transcript_name=XKRYP2-201;source_gene=ENSG00000230904.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230904.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432915.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432915.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP2;alternative_source_transcripts=ENST00000432915.1,ENST00000432915.1;transcript_id=HG002_chrY_T0001510;gene_id=HG002_chrY_G0000524;Parent=HG002_chrY_G0000524;transcript_name=HG002_chrY_T0001510;gene_name=XKRYP2;ID=HG002_chrY_T0001510;Name=XKRYP2
HG002_chrY	CAT	exon	19717574	19718065	.	-	.	source_transcript=ENST00000432915.1;source_transcript_name=XKRYP2-201;source_gene=ENSG00000230904.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230904.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432915.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432915.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP2;alternative_source_transcripts=ENST00000432915.1,ENST00000432915.1;transcript_id=HG002_chrY_T0001510;gene_id=HG002_chrY_G0000524;Parent=HG002_chrY_T0001510;transcript_name=HG002_chrY_T0001510;gene_name=XKRYP2;ID=exon:HG002_chrY_T0001510:0;Name=XKRYP2;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19732344	19735727	.	+	.	source_gene_common_name=USP9YP10;source_gene=ENSG00000238135.1;gene_id=HG002_chrY_G0000525;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP10;gene_sources=liftoff,transMap,transMap_pairwise;ID=HG002_chrY_G0000525;Name=USP9YP10
HG002_chrY	CAT	transcript	19732344	19735727	1000	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG002_chrY_T0001511;gene_id=HG002_chrY_G0000525;Parent=HG002_chrY_G0000525;transcript_name=HG002_chrY_T0001511;gene_name=USP9YP10;ID=HG002_chrY_T0001511;Name=USP9YP10
HG002_chrY	CAT	exon	19732344	19732564	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG002_chrY_T0001511;gene_id=HG002_chrY_G0000525;Parent=HG002_chrY_T0001511;transcript_name=HG002_chrY_T0001511;gene_name=USP9YP10;ID=exon:HG002_chrY_T0001511:0;Name=USP9YP10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19732565	19733333	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG002_chrY_T0001511;gene_id=HG002_chrY_G0000525;Parent=HG002_chrY_T0001511;transcript_name=HG002_chrY_T0001511;gene_name=USP9YP10;ID=intron:HG002_chrY_T0001511:0;Name=USP9YP10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19733334	19733633	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG002_chrY_T0001511;gene_id=HG002_chrY_G0000525;Parent=HG002_chrY_T0001511;transcript_name=HG002_chrY_T0001511;gene_name=USP9YP10;ID=exon:HG002_chrY_T0001511:1;Name=USP9YP10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19733634	19735538	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG002_chrY_T0001511;gene_id=HG002_chrY_G0000525;Parent=HG002_chrY_T0001511;transcript_name=HG002_chrY_T0001511;gene_name=USP9YP10;ID=intron:HG002_chrY_T0001511:1;Name=USP9YP10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19735539	19735727	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG002_chrY_T0001511;gene_id=HG002_chrY_G0000525;Parent=HG002_chrY_T0001511;transcript_name=HG002_chrY_T0001511;gene_name=USP9YP10;ID=exon:HG002_chrY_T0001511:2;Name=USP9YP10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19732344	19735727	1000	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG002_chrY_T0001512;gene_id=HG002_chrY_G0000525;Parent=HG002_chrY_G0000525;transcript_name=HG002_chrY_T0001512;gene_name=USP9YP10;ID=HG002_chrY_T0001512;Name=USP9YP10
HG002_chrY	CAT	exon	19732344	19732564	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG002_chrY_T0001512;gene_id=HG002_chrY_G0000525;Parent=HG002_chrY_T0001512;transcript_name=HG002_chrY_T0001512;gene_name=USP9YP10;ID=exon:HG002_chrY_T0001512:0;Name=USP9YP10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19732565	19733333	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG002_chrY_T0001512;gene_id=HG002_chrY_G0000525;Parent=HG002_chrY_T0001512;transcript_name=HG002_chrY_T0001512;gene_name=USP9YP10;ID=intron:HG002_chrY_T0001512:0;Name=USP9YP10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19733334	19733455	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG002_chrY_T0001512;gene_id=HG002_chrY_G0000525;Parent=HG002_chrY_T0001512;transcript_name=HG002_chrY_T0001512;gene_name=USP9YP10;ID=exon:HG002_chrY_T0001512:1;Name=USP9YP10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19733456	19733539	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG002_chrY_T0001512;gene_id=HG002_chrY_G0000525;Parent=HG002_chrY_T0001512;transcript_name=HG002_chrY_T0001512;gene_name=USP9YP10;ID=intron:HG002_chrY_T0001512:1;Name=USP9YP10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19733540	19733633	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG002_chrY_T0001512;gene_id=HG002_chrY_G0000525;Parent=HG002_chrY_T0001512;transcript_name=HG002_chrY_T0001512;gene_name=USP9YP10;ID=exon:HG002_chrY_T0001512:2;Name=USP9YP10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19733634	19735538	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG002_chrY_T0001512;gene_id=HG002_chrY_G0000525;Parent=HG002_chrY_T0001512;transcript_name=HG002_chrY_T0001512;gene_name=USP9YP10;ID=intron:HG002_chrY_T0001512:2;Name=USP9YP10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19735539	19735727	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG002_chrY_T0001512;gene_id=HG002_chrY_G0000525;Parent=HG002_chrY_T0001512;transcript_name=HG002_chrY_T0001512;gene_name=USP9YP10;ID=exon:HG002_chrY_T0001512:3;Name=USP9YP10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19732344	19735727	1000	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG002_chrY_T0001513;gene_id=HG002_chrY_G0000525;Parent=HG002_chrY_G0000525;transcript_name=HG002_chrY_T0001513;gene_name=USP9YP10;ID=HG002_chrY_T0001513;Name=USP9YP10
HG002_chrY	CAT	exon	19732344	19732564	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG002_chrY_T0001513;gene_id=HG002_chrY_G0000525;Parent=HG002_chrY_T0001513;transcript_name=HG002_chrY_T0001513;gene_name=USP9YP10;ID=exon:HG002_chrY_T0001513:0;Name=USP9YP10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19732565	19733333	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG002_chrY_T0001513;gene_id=HG002_chrY_G0000525;Parent=HG002_chrY_T0001513;transcript_name=HG002_chrY_T0001513;gene_name=USP9YP10;ID=intron:HG002_chrY_T0001513:0;Name=USP9YP10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19733334	19733457	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG002_chrY_T0001513;gene_id=HG002_chrY_G0000525;Parent=HG002_chrY_T0001513;transcript_name=HG002_chrY_T0001513;gene_name=USP9YP10;ID=exon:HG002_chrY_T0001513:1;Name=USP9YP10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19733458	19733539	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG002_chrY_T0001513;gene_id=HG002_chrY_G0000525;Parent=HG002_chrY_T0001513;transcript_name=HG002_chrY_T0001513;gene_name=USP9YP10;ID=intron:HG002_chrY_T0001513:1;Name=USP9YP10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19733540	19733633	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG002_chrY_T0001513;gene_id=HG002_chrY_G0000525;Parent=HG002_chrY_T0001513;transcript_name=HG002_chrY_T0001513;gene_name=USP9YP10;ID=exon:HG002_chrY_T0001513:2;Name=USP9YP10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19733634	19735538	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG002_chrY_T0001513;gene_id=HG002_chrY_G0000525;Parent=HG002_chrY_T0001513;transcript_name=HG002_chrY_T0001513;gene_name=USP9YP10;ID=intron:HG002_chrY_T0001513:2;Name=USP9YP10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19735539	19735727	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG002_chrY_T0001513;gene_id=HG002_chrY_G0000525;Parent=HG002_chrY_T0001513;transcript_name=HG002_chrY_T0001513;gene_name=USP9YP10;ID=exon:HG002_chrY_T0001513:3;Name=USP9YP10;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19739242	19745552	.	-	.	source_gene_common_name=USP9YP28;source_gene=ENSG00000224151.1;gene_id=HG002_chrY_G0000526;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=USP9YP28;gene_sources=liftoff;ID=HG002_chrY_G0000526;Name=USP9YP28
HG002_chrY	CAT	transcript	19739242	19745552	1000	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=HG002_chrY_T0001514;gene_id=HG002_chrY_G0000526;Parent=HG002_chrY_G0000526;transcript_name=HG002_chrY_T0001514;gene_name=USP9YP28;ID=HG002_chrY_T0001514;Name=USP9YP28
HG002_chrY	CAT	exon	19739242	19739337	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=HG002_chrY_T0001514;gene_id=HG002_chrY_G0000526;Parent=HG002_chrY_T0001514;transcript_name=HG002_chrY_T0001514;gene_name=USP9YP28;ID=exon:HG002_chrY_T0001514:0;Name=USP9YP28;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19739338	19739714	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=HG002_chrY_T0001514;gene_id=HG002_chrY_G0000526;Parent=HG002_chrY_T0001514;transcript_name=HG002_chrY_T0001514;gene_name=USP9YP28;ID=intron:HG002_chrY_T0001514:0;Name=USP9YP28;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19739715	19739889	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=HG002_chrY_T0001514;gene_id=HG002_chrY_G0000526;Parent=HG002_chrY_T0001514;transcript_name=HG002_chrY_T0001514;gene_name=USP9YP28;ID=exon:HG002_chrY_T0001514:1;Name=USP9YP28;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19739890	19740130	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=HG002_chrY_T0001514;gene_id=HG002_chrY_G0000526;Parent=HG002_chrY_T0001514;transcript_name=HG002_chrY_T0001514;gene_name=USP9YP28;ID=intron:HG002_chrY_T0001514:1;Name=USP9YP28;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19740131	19740159	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=HG002_chrY_T0001514;gene_id=HG002_chrY_G0000526;Parent=HG002_chrY_T0001514;transcript_name=HG002_chrY_T0001514;gene_name=USP9YP28;ID=exon:HG002_chrY_T0001514:2;Name=USP9YP28;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19740160	19740291	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=HG002_chrY_T0001514;gene_id=HG002_chrY_G0000526;Parent=HG002_chrY_T0001514;transcript_name=HG002_chrY_T0001514;gene_name=USP9YP28;ID=intron:HG002_chrY_T0001514:2;Name=USP9YP28;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19740292	19740448	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=HG002_chrY_T0001514;gene_id=HG002_chrY_G0000526;Parent=HG002_chrY_T0001514;transcript_name=HG002_chrY_T0001514;gene_name=USP9YP28;ID=exon:HG002_chrY_T0001514:3;Name=USP9YP28;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19740449	19745420	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=HG002_chrY_T0001514;gene_id=HG002_chrY_G0000526;Parent=HG002_chrY_T0001514;transcript_name=HG002_chrY_T0001514;gene_name=USP9YP28;ID=intron:HG002_chrY_T0001514:3;Name=USP9YP28;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19745421	19745552	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=HG002_chrY_T0001514;gene_id=HG002_chrY_G0000526;Parent=HG002_chrY_T0001514;transcript_name=HG002_chrY_T0001514;gene_name=USP9YP28;ID=exon:HG002_chrY_T0001514:4;Name=USP9YP28;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19739970	19740131	.	-	.	source_gene_common_name=RNU1-41P;source_gene=ENSG00000251970.1;gene_id=HG002_chrY_G0000527;gene_biotype=snRNA;gene_name=RNU1-41P;gene_sources=liftoff;ID=HG002_chrY_G0000527;Name=RNU1-41P
HG002_chrY	CAT	transcript	19739970	19740131	1000	-	.	source_transcript=ENST00000516161.1;source_transcript_name=RNU1-41P-201;source_gene=ENSG00000251970.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000251970.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516161.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-41P;transcript_id=HG002_chrY_T0001515;gene_id=HG002_chrY_G0000527;Parent=HG002_chrY_G0000527;transcript_name=HG002_chrY_T0001515;gene_name=RNU1-41P;ID=HG002_chrY_T0001515;Name=RNU1-41P
HG002_chrY	CAT	exon	19739970	19740131	.	-	.	source_transcript=ENST00000516161.1;source_transcript_name=RNU1-41P-201;source_gene=ENSG00000251970.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000251970.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-41P;transcript_id=HG002_chrY_T0001515;gene_id=HG002_chrY_G0000527;Parent=HG002_chrY_T0001515;transcript_name=HG002_chrY_T0001515;gene_name=RNU1-41P;ID=exon:HG002_chrY_T0001515:0;Name=RNU1-41P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19754510	19773520	.	+	.	source_gene_common_name=OFD1P7Y;source_gene=ENSG00000238088.1;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;gene_id=HG002_chrY_G0000528;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P7Y;gene_sources=liftoff;ID=HG002_chrY_G0000528;Name=OFD1P7Y
HG002_chrY	CAT	transcript	19754510	19773520	1000	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG002_chrY_T0001517;gene_id=HG002_chrY_G0000528;Parent=HG002_chrY_G0000528;transcript_name=HG002_chrY_T0001517;gene_name=OFD1P7Y;ID=HG002_chrY_T0001517;Name=OFD1P7Y
HG002_chrY	CAT	exon	19754510	19754581	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG002_chrY_T0001517;gene_id=HG002_chrY_G0000528;Parent=HG002_chrY_T0001517;transcript_name=HG002_chrY_T0001517;gene_name=OFD1P7Y;ID=exon:HG002_chrY_T0001517:0;Name=OFD1P7Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19754582	19755774	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG002_chrY_T0001517;gene_id=HG002_chrY_G0000528;Parent=HG002_chrY_T0001517;transcript_name=HG002_chrY_T0001517;gene_name=OFD1P7Y;ID=intron:HG002_chrY_T0001517:0;Name=OFD1P7Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19755775	19755975	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG002_chrY_T0001517;gene_id=HG002_chrY_G0000528;Parent=HG002_chrY_T0001517;transcript_name=HG002_chrY_T0001517;gene_name=OFD1P7Y;ID=exon:HG002_chrY_T0001517:1;Name=OFD1P7Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19755976	19758192	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG002_chrY_T0001517;gene_id=HG002_chrY_G0000528;Parent=HG002_chrY_T0001517;transcript_name=HG002_chrY_T0001517;gene_name=OFD1P7Y;ID=intron:HG002_chrY_T0001517:1;Name=OFD1P7Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19758193	19758257	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG002_chrY_T0001517;gene_id=HG002_chrY_G0000528;Parent=HG002_chrY_T0001517;transcript_name=HG002_chrY_T0001517;gene_name=OFD1P7Y;ID=exon:HG002_chrY_T0001517:2;Name=OFD1P7Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19758258	19758344	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG002_chrY_T0001517;gene_id=HG002_chrY_G0000528;Parent=HG002_chrY_T0001517;transcript_name=HG002_chrY_T0001517;gene_name=OFD1P7Y;ID=intron:HG002_chrY_T0001517:2;Name=OFD1P7Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19758345	19758374	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG002_chrY_T0001517;gene_id=HG002_chrY_G0000528;Parent=HG002_chrY_T0001517;transcript_name=HG002_chrY_T0001517;gene_name=OFD1P7Y;ID=exon:HG002_chrY_T0001517:3;Name=OFD1P7Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19758375	19762588	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG002_chrY_T0001517;gene_id=HG002_chrY_G0000528;Parent=HG002_chrY_T0001517;transcript_name=HG002_chrY_T0001517;gene_name=OFD1P7Y;ID=intron:HG002_chrY_T0001517:3;Name=OFD1P7Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19762589	19762725	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG002_chrY_T0001517;gene_id=HG002_chrY_G0000528;Parent=HG002_chrY_T0001517;transcript_name=HG002_chrY_T0001517;gene_name=OFD1P7Y;ID=exon:HG002_chrY_T0001517:4;Name=OFD1P7Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19762726	19763073	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG002_chrY_T0001517;gene_id=HG002_chrY_G0000528;Parent=HG002_chrY_T0001517;transcript_name=HG002_chrY_T0001517;gene_name=OFD1P7Y;ID=intron:HG002_chrY_T0001517:4;Name=OFD1P7Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19763074	19763189	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG002_chrY_T0001517;gene_id=HG002_chrY_G0000528;Parent=HG002_chrY_T0001517;transcript_name=HG002_chrY_T0001517;gene_name=OFD1P7Y;ID=exon:HG002_chrY_T0001517:5;Name=OFD1P7Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19763190	19766299	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG002_chrY_T0001517;gene_id=HG002_chrY_G0000528;Parent=HG002_chrY_T0001517;transcript_name=HG002_chrY_T0001517;gene_name=OFD1P7Y;ID=intron:HG002_chrY_T0001517:5;Name=OFD1P7Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19766300	19766406	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG002_chrY_T0001517;gene_id=HG002_chrY_G0000528;Parent=HG002_chrY_T0001517;transcript_name=HG002_chrY_T0001517;gene_name=OFD1P7Y;ID=exon:HG002_chrY_T0001517:6;Name=OFD1P7Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19766407	19768574	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG002_chrY_T0001517;gene_id=HG002_chrY_G0000528;Parent=HG002_chrY_T0001517;transcript_name=HG002_chrY_T0001517;gene_name=OFD1P7Y;ID=intron:HG002_chrY_T0001517:6;Name=OFD1P7Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19768575	19768692	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG002_chrY_T0001517;gene_id=HG002_chrY_G0000528;Parent=HG002_chrY_T0001517;transcript_name=HG002_chrY_T0001517;gene_name=OFD1P7Y;ID=exon:HG002_chrY_T0001517:7;Name=OFD1P7Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19768693	19770473	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG002_chrY_T0001517;gene_id=HG002_chrY_G0000528;Parent=HG002_chrY_T0001517;transcript_name=HG002_chrY_T0001517;gene_name=OFD1P7Y;ID=intron:HG002_chrY_T0001517:7;Name=OFD1P7Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19770474	19770541	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG002_chrY_T0001517;gene_id=HG002_chrY_G0000528;Parent=HG002_chrY_T0001517;transcript_name=HG002_chrY_T0001517;gene_name=OFD1P7Y;ID=exon:HG002_chrY_T0001517:8;Name=OFD1P7Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19770542	19771653	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG002_chrY_T0001517;gene_id=HG002_chrY_G0000528;Parent=HG002_chrY_T0001517;transcript_name=HG002_chrY_T0001517;gene_name=OFD1P7Y;ID=intron:HG002_chrY_T0001517:8;Name=OFD1P7Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19771654	19771753	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG002_chrY_T0001517;gene_id=HG002_chrY_G0000528;Parent=HG002_chrY_T0001517;transcript_name=HG002_chrY_T0001517;gene_name=OFD1P7Y;ID=exon:HG002_chrY_T0001517:9;Name=OFD1P7Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19771754	19773379	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG002_chrY_T0001517;gene_id=HG002_chrY_G0000528;Parent=HG002_chrY_T0001517;transcript_name=HG002_chrY_T0001517;gene_name=OFD1P7Y;ID=intron:HG002_chrY_T0001517:9;Name=OFD1P7Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19773380	19773520	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG002_chrY_T0001517;gene_id=HG002_chrY_G0000528;Parent=HG002_chrY_T0001517;transcript_name=HG002_chrY_T0001517;gene_name=OFD1P7Y;ID=exon:HG002_chrY_T0001517:10;Name=OFD1P7Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19778342	19778512	.	+	.	source_gene_common_name=MTCYBP2;source_gene=ENSG00000217179.1;alternative_source_transcripts=ENST00000407745.1,ENST00000407745.1;gene_id=HG002_chrY_G0000529;gene_biotype=processed_pseudogene;gene_name=MTCYBP2;gene_sources=liftoff;ID=HG002_chrY_G0000529;Name=MTCYBP2
HG002_chrY	CAT	transcript	19778342	19778512	1000	+	.	source_transcript=ENST00000407745.1;source_transcript_name=MTCYBP2-201;source_gene=ENSG00000217179.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000217179.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000407745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000407745.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTCYBP2;alternative_source_transcripts=ENST00000407745.1,ENST00000407745.1;transcript_id=HG002_chrY_T0001518;gene_id=HG002_chrY_G0000529;Parent=HG002_chrY_G0000529;transcript_name=HG002_chrY_T0001518;gene_name=MTCYBP2;ID=HG002_chrY_T0001518;Name=MTCYBP2
HG002_chrY	CAT	exon	19778342	19778512	.	+	.	source_transcript=ENST00000407745.1;source_transcript_name=MTCYBP2-201;source_gene=ENSG00000217179.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000217179.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000407745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000407745.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTCYBP2;alternative_source_transcripts=ENST00000407745.1,ENST00000407745.1;transcript_id=HG002_chrY_T0001518;gene_id=HG002_chrY_G0000529;Parent=HG002_chrY_T0001518;transcript_name=HG002_chrY_T0001518;gene_name=MTCYBP2;ID=exon:HG002_chrY_T0001518:0;Name=MTCYBP2;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19891431	19892654	.	+	.	source_gene_common_name=ZNF839P1;source_gene=ENSG00000217896.2;alternative_source_transcripts=ENST00000403487.2,ENST00000403487.2;gene_id=HG002_chrY_G0000530;gene_biotype=processed_pseudogene;gene_name=ZNF839P1;gene_sources=liftoff;ID=HG002_chrY_G0000530;Name=ZNF839P1
HG002_chrY	CAT	transcript	19891431	19892654	1000	+	.	source_transcript=ENST00000403487.2;source_transcript_name=ZNF839P1-201;source_gene=ENSG00000217896.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000217896.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000403487.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000403487.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF839P1;alternative_source_transcripts=ENST00000403487.2,ENST00000403487.2;transcript_id=HG002_chrY_T0001560;gene_id=HG002_chrY_G0000530;Parent=HG002_chrY_G0000530;transcript_name=HG002_chrY_T0001560;gene_name=ZNF839P1;ID=HG002_chrY_T0001560;Name=ZNF839P1
HG002_chrY	CAT	exon	19891431	19892110	.	+	.	source_transcript=ENST00000403487.2;source_transcript_name=ZNF839P1-201;source_gene=ENSG00000217896.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000217896.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000403487.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000403487.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF839P1;alternative_source_transcripts=ENST00000403487.2,ENST00000403487.2;transcript_id=HG002_chrY_T0001560;gene_id=HG002_chrY_G0000530;Parent=HG002_chrY_T0001560;transcript_name=HG002_chrY_T0001560;gene_name=ZNF839P1;ID=exon:HG002_chrY_T0001560:0;Name=ZNF839P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19892111	19892473	.	+	.	source_transcript=ENST00000403487.2;source_transcript_name=ZNF839P1-201;source_gene=ENSG00000217896.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000217896.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000403487.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000403487.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF839P1;alternative_source_transcripts=ENST00000403487.2,ENST00000403487.2;transcript_id=HG002_chrY_T0001560;gene_id=HG002_chrY_G0000530;Parent=HG002_chrY_T0001560;transcript_name=HG002_chrY_T0001560;gene_name=ZNF839P1;ID=intron:HG002_chrY_T0001560:0;Name=ZNF839P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19892474	19892654	.	+	.	source_transcript=ENST00000403487.2;source_transcript_name=ZNF839P1-201;source_gene=ENSG00000217896.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000217896.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000403487.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000403487.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF839P1;alternative_source_transcripts=ENST00000403487.2,ENST00000403487.2;transcript_id=HG002_chrY_T0001560;gene_id=HG002_chrY_G0000530;Parent=HG002_chrY_T0001560;transcript_name=HG002_chrY_T0001560;gene_name=ZNF839P1;ID=exon:HG002_chrY_T0001560:1;Name=ZNF839P1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19898724	19898966	.	-	.	source_gene_common_name=CD24P4;source_gene=ENSG00000185275.6;alternative_source_transcripts=ENST00000382840.3,ENST00000382840.3;gene_id=HG002_chrY_G0000531;gene_biotype=processed_pseudogene;gene_name=CD24P4;gene_sources=liftoff;ID=HG002_chrY_G0000531;Name=CD24P4
HG002_chrY	CAT	transcript	19898724	19898966	1000	-	.	source_transcript=ENST00000382840.3;source_transcript_name=CD24P4-201;source_gene=ENSG00000185275.6;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000185275.6;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000382840.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382840.3;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD24P4;alternative_source_transcripts=ENST00000382840.3,ENST00000382840.3;transcript_id=HG002_chrY_T0001561;gene_id=HG002_chrY_G0000531;Parent=HG002_chrY_G0000531;transcript_name=HG002_chrY_T0001561;gene_name=CD24P4;ID=HG002_chrY_T0001561;Name=CD24P4
HG002_chrY	CAT	exon	19898724	19898966	.	-	.	source_transcript=ENST00000382840.3;source_transcript_name=CD24P4-201;source_gene=ENSG00000185275.6;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000185275.6;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000382840.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382840.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD24P4;alternative_source_transcripts=ENST00000382840.3,ENST00000382840.3;transcript_id=HG002_chrY_T0001561;gene_id=HG002_chrY_G0000531;Parent=HG002_chrY_T0001561;transcript_name=HG002_chrY_T0001561;gene_name=CD24P4;ID=exon:HG002_chrY_T0001561:0;Name=CD24P4;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19925241	19925345	.	-	.	source_gene_common_name=RNU6-255P;source_gene=ENSG00000252766.1;alternative_source_transcripts=ENST00000516957.1,ENST00000516957.1;gene_id=HG002_chrY_G0000532;gene_biotype=snRNA;gene_name=RNU6-255P;gene_sources=liftoff;ID=HG002_chrY_G0000532;Name=RNU6-255P
HG002_chrY	CAT	transcript	19925241	19925345	1000	-	.	source_transcript=ENST00000516957.1;source_transcript_name=RNU6-255P-201;source_gene=ENSG00000252766.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252766.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516957.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-255P;alternative_source_transcripts=ENST00000516957.1,ENST00000516957.1;transcript_id=HG002_chrY_T0001562;gene_id=HG002_chrY_G0000532;Parent=HG002_chrY_G0000532;transcript_name=HG002_chrY_T0001562;gene_name=RNU6-255P;ID=HG002_chrY_T0001562;Name=RNU6-255P
HG002_chrY	CAT	exon	19925241	19925345	.	-	.	source_transcript=ENST00000516957.1;source_transcript_name=RNU6-255P-201;source_gene=ENSG00000252766.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252766.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516957.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-255P;alternative_source_transcripts=ENST00000516957.1,ENST00000516957.1;transcript_id=HG002_chrY_T0001562;gene_id=HG002_chrY_G0000532;Parent=HG002_chrY_T0001562;transcript_name=HG002_chrY_T0001562;gene_name=RNU6-255P;ID=exon:HG002_chrY_T0001562:0;Name=RNU6-255P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	19982390	19993317	.	+	.	source_gene_common_name=ENSG00000310485;source_gene=ENSG00000310485.1;alternative_source_transcripts=ENST00000850331.1,ENST00000850331.1;gene_id=HG002_chrY_G0000533;gene_biotype=lncRNA;gene_name=ENSG00000310485;gene_sources=liftoff;ID=HG002_chrY_G0000533;Name=ENSG00000310485
HG002_chrY	CAT	transcript	19982390	19993317	1000	+	.	source_transcript=ENST00000850331.1;source_transcript_name=ENST00000850331;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850331.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850331.1,ENST00000850331.1;transcript_id=HG002_chrY_T0001565;gene_id=HG002_chrY_G0000533;Parent=HG002_chrY_G0000533;transcript_name=HG002_chrY_T0001565;gene_name=ENSG00000310485;ID=HG002_chrY_T0001565;Name=ENSG00000310485
HG002_chrY	CAT	exon	19982390	19982513	.	+	.	source_transcript=ENST00000850331.1;source_transcript_name=ENST00000850331;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850331.1,ENST00000850331.1;transcript_id=HG002_chrY_T0001565;gene_id=HG002_chrY_G0000533;Parent=HG002_chrY_T0001565;transcript_name=HG002_chrY_T0001565;gene_name=ENSG00000310485;ID=exon:HG002_chrY_T0001565:0;Name=ENSG00000310485;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19982514	19992755	.	+	.	source_transcript=ENST00000850331.1;source_transcript_name=ENST00000850331;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850331.1,ENST00000850331.1;transcript_id=HG002_chrY_T0001565;gene_id=HG002_chrY_G0000533;Parent=HG002_chrY_T0001565;transcript_name=HG002_chrY_T0001565;gene_name=ENSG00000310485;ID=intron:HG002_chrY_T0001565:0;Name=ENSG00000310485;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19992756	19993317	.	+	.	source_transcript=ENST00000850331.1;source_transcript_name=ENST00000850331;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850331.1,ENST00000850331.1;transcript_id=HG002_chrY_T0001565;gene_id=HG002_chrY_G0000533;Parent=HG002_chrY_T0001565;transcript_name=HG002_chrY_T0001565;gene_name=ENSG00000310485;ID=exon:HG002_chrY_T0001565:1;Name=ENSG00000310485;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	19982437	19982773	1000	+	.	source_transcript=ENST00000850332.1;source_transcript_name=ENST00000850332;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850332.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850332.1,ENST00000850332.1;transcript_id=HG002_chrY_T0001566;gene_id=HG002_chrY_G0000533;Parent=HG002_chrY_G0000533;transcript_name=HG002_chrY_T0001566;gene_name=ENSG00000310485;ID=HG002_chrY_T0001566;Name=ENSG00000310485
HG002_chrY	CAT	exon	19982437	19982513	.	+	.	source_transcript=ENST00000850332.1;source_transcript_name=ENST00000850332;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850332.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850332.1,ENST00000850332.1;transcript_id=HG002_chrY_T0001566;gene_id=HG002_chrY_G0000533;Parent=HG002_chrY_T0001566;transcript_name=HG002_chrY_T0001566;gene_name=ENSG00000310485;ID=exon:HG002_chrY_T0001566:0;Name=ENSG00000310485;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	19982514	19982601	.	+	.	source_transcript=ENST00000850332.1;source_transcript_name=ENST00000850332;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850332.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850332.1,ENST00000850332.1;transcript_id=HG002_chrY_T0001566;gene_id=HG002_chrY_G0000533;Parent=HG002_chrY_T0001566;transcript_name=HG002_chrY_T0001566;gene_name=ENSG00000310485;ID=intron:HG002_chrY_T0001566:0;Name=ENSG00000310485;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	19982602	19982773	.	+	.	source_transcript=ENST00000850332.1;source_transcript_name=ENST00000850332;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850332.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850332.1,ENST00000850332.1;transcript_id=HG002_chrY_T0001566;gene_id=HG002_chrY_G0000533;Parent=HG002_chrY_T0001566;transcript_name=HG002_chrY_T0001566;gene_name=ENSG00000310485;ID=exon:HG002_chrY_T0001566:1;Name=ENSG00000310485;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	20160218	20167133	.	-	.	source_gene_common_name=ENSG00000274282;source_gene=ENSG00000274282.1;alternative_source_transcripts=ENST00000615809.1,ENST00000615809.1;gene_id=HG002_chrY_G0000534;gene_biotype=processed_pseudogene;gene_name=ENSG00000274282;gene_sources=liftoff;ID=HG002_chrY_G0000534;Name=ENSG00000274282
HG002_chrY	CAT	transcript	20160218	20167133	1000	-	.	source_transcript=ENST00000615809.1;source_transcript_name=ENST00000615809;source_gene=ENSG00000274282.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274282.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000615809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615809.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274282;alternative_source_transcripts=ENST00000615809.1,ENST00000615809.1;transcript_id=HG002_chrY_T0001568;gene_id=HG002_chrY_G0000534;Parent=HG002_chrY_G0000534;transcript_name=HG002_chrY_T0001568;gene_name=ENSG00000274282;ID=HG002_chrY_T0001568;Name=ENSG00000274282
HG002_chrY	CAT	exon	20160218	20160710	.	-	.	source_transcript=ENST00000615809.1;source_transcript_name=ENST00000615809;source_gene=ENSG00000274282.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274282.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000615809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615809.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274282;alternative_source_transcripts=ENST00000615809.1,ENST00000615809.1;transcript_id=HG002_chrY_T0001568;gene_id=HG002_chrY_G0000534;Parent=HG002_chrY_T0001568;transcript_name=HG002_chrY_T0001568;gene_name=ENSG00000274282;ID=exon:HG002_chrY_T0001568:0;Name=ENSG00000274282;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20160711	20166784	.	-	.	source_transcript=ENST00000615809.1;source_transcript_name=ENST00000615809;source_gene=ENSG00000274282.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274282.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000615809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615809.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274282;alternative_source_transcripts=ENST00000615809.1,ENST00000615809.1;transcript_id=HG002_chrY_T0001568;gene_id=HG002_chrY_G0000534;Parent=HG002_chrY_T0001568;transcript_name=HG002_chrY_T0001568;gene_name=ENSG00000274282;ID=intron:HG002_chrY_T0001568:0;Name=ENSG00000274282;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20166785	20167133	.	-	.	source_transcript=ENST00000615809.1;source_transcript_name=ENST00000615809;source_gene=ENSG00000274282.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274282.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000615809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615809.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274282;alternative_source_transcripts=ENST00000615809.1,ENST00000615809.1;transcript_id=HG002_chrY_T0001568;gene_id=HG002_chrY_G0000534;Parent=HG002_chrY_T0001568;transcript_name=HG002_chrY_T0001568;gene_name=ENSG00000274282;ID=exon:HG002_chrY_T0001568:1;Name=ENSG00000274282;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	20233861	20234865	.	+	.	source_gene_common_name=GAPDHP19;source_gene=ENSG00000234529.2;alternative_source_transcripts=ENST00000431768.2,ENST00000431768.2;gene_id=HG002_chrY_G0000535;gene_biotype=processed_pseudogene;gene_name=GAPDHP19;gene_sources=liftoff;ID=HG002_chrY_G0000535;Name=GAPDHP19
HG002_chrY	CAT	transcript	20233861	20234865	1000	+	.	source_transcript=ENST00000431768.2;source_transcript_name=GAPDHP19-201;source_gene=ENSG00000234529.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234529.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431768.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431768.2;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GAPDHP19;alternative_source_transcripts=ENST00000431768.2,ENST00000431768.2;transcript_id=HG002_chrY_T0001569;gene_id=HG002_chrY_G0000535;Parent=HG002_chrY_G0000535;transcript_name=HG002_chrY_T0001569;gene_name=GAPDHP19;ID=HG002_chrY_T0001569;Name=GAPDHP19
HG002_chrY	CAT	exon	20233861	20234865	.	+	.	source_transcript=ENST00000431768.2;source_transcript_name=GAPDHP19-201;source_gene=ENSG00000234529.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234529.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431768.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431768.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GAPDHP19;alternative_source_transcripts=ENST00000431768.2,ENST00000431768.2;transcript_id=HG002_chrY_T0001569;gene_id=HG002_chrY_G0000535;Parent=HG002_chrY_T0001569;transcript_name=HG002_chrY_T0001569;gene_name=GAPDHP19;ID=exon:HG002_chrY_T0001569:0;Name=GAPDHP19;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	20361766	20473592	.	-	.	source_gene_common_name=BCORP1;source_gene=ENSG00000291031.2;gene_id=HG002_chrY_G0000536;gene_biotype=lncRNA;gene_name=BCORP1;gene_sources=liftoff;ID=HG002_chrY_G0000536;Name=BCORP1
HG002_chrY	CAT	transcript	20361766	20409493	1000	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001570;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001570;gene_name=BCORP1;ID=HG002_chrY_T0001570;Name=BCORP1
HG002_chrY	CAT	exon	20361766	20363199	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001570;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001570;transcript_name=HG002_chrY_T0001570;gene_name=BCORP1;ID=exon:HG002_chrY_T0001570:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20363200	20365243	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001570;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001570;transcript_name=HG002_chrY_T0001570;gene_name=BCORP1;ID=intron:HG002_chrY_T0001570:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20365244	20365399	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001570;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001570;transcript_name=HG002_chrY_T0001570;gene_name=BCORP1;ID=exon:HG002_chrY_T0001570:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20365400	20365608	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001570;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001570;transcript_name=HG002_chrY_T0001570;gene_name=BCORP1;ID=intron:HG002_chrY_T0001570:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20365609	20365686	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001570;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001570;transcript_name=HG002_chrY_T0001570;gene_name=BCORP1;ID=exon:HG002_chrY_T0001570:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20365687	20371422	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001570;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001570;transcript_name=HG002_chrY_T0001570;gene_name=BCORP1;ID=intron:HG002_chrY_T0001570:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20371423	20371544	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001570;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001570;transcript_name=HG002_chrY_T0001570;gene_name=BCORP1;ID=exon:HG002_chrY_T0001570:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20371545	20372772	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001570;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001570;transcript_name=HG002_chrY_T0001570;gene_name=BCORP1;ID=intron:HG002_chrY_T0001570:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20372773	20373691	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001570;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001570;transcript_name=HG002_chrY_T0001570;gene_name=BCORP1;ID=exon:HG002_chrY_T0001570:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20373692	20380221	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001570;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001570;transcript_name=HG002_chrY_T0001570;gene_name=BCORP1;ID=intron:HG002_chrY_T0001570:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20380222	20380461	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001570;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001570;transcript_name=HG002_chrY_T0001570;gene_name=BCORP1;ID=exon:HG002_chrY_T0001570:5;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20380462	20380956	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001570;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001570;transcript_name=HG002_chrY_T0001570;gene_name=BCORP1;ID=intron:HG002_chrY_T0001570:5;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20380957	20381220	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001570;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001570;transcript_name=HG002_chrY_T0001570;gene_name=BCORP1;ID=exon:HG002_chrY_T0001570:6;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20381221	20386485	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001570;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001570;transcript_name=HG002_chrY_T0001570;gene_name=BCORP1;ID=intron:HG002_chrY_T0001570:6;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20386486	20386611	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001570;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001570;transcript_name=HG002_chrY_T0001570;gene_name=BCORP1;ID=exon:HG002_chrY_T0001570:7;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20386612	20409348	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001570;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001570;transcript_name=HG002_chrY_T0001570;gene_name=BCORP1;ID=intron:HG002_chrY_T0001570:7;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20409349	20409493	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001570;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001570;transcript_name=HG002_chrY_T0001570;gene_name=BCORP1;ID=exon:HG002_chrY_T0001570:8;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20362647	20409453	1000	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001571;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001571;gene_name=BCORP1;ID=HG002_chrY_T0001571;Name=BCORP1
HG002_chrY	CAT	exon	20362647	20363199	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001571;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001571;transcript_name=HG002_chrY_T0001571;gene_name=BCORP1;ID=exon:HG002_chrY_T0001571:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20363200	20363391	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001571;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001571;transcript_name=HG002_chrY_T0001571;gene_name=BCORP1;ID=intron:HG002_chrY_T0001571:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20363392	20363452	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001571;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001571;transcript_name=HG002_chrY_T0001571;gene_name=BCORP1;ID=exon:HG002_chrY_T0001571:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20363453	20365243	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001571;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001571;transcript_name=HG002_chrY_T0001571;gene_name=BCORP1;ID=intron:HG002_chrY_T0001571:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20365244	20365399	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001571;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001571;transcript_name=HG002_chrY_T0001571;gene_name=BCORP1;ID=exon:HG002_chrY_T0001571:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20365400	20365608	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001571;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001571;transcript_name=HG002_chrY_T0001571;gene_name=BCORP1;ID=intron:HG002_chrY_T0001571:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20365609	20365686	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001571;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001571;transcript_name=HG002_chrY_T0001571;gene_name=BCORP1;ID=exon:HG002_chrY_T0001571:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20365687	20366278	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001571;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001571;transcript_name=HG002_chrY_T0001571;gene_name=BCORP1;ID=intron:HG002_chrY_T0001571:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20366279	20366424	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001571;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001571;transcript_name=HG002_chrY_T0001571;gene_name=BCORP1;ID=exon:HG002_chrY_T0001571:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20366425	20371422	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001571;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001571;transcript_name=HG002_chrY_T0001571;gene_name=BCORP1;ID=intron:HG002_chrY_T0001571:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20371423	20371544	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001571;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001571;transcript_name=HG002_chrY_T0001571;gene_name=BCORP1;ID=exon:HG002_chrY_T0001571:5;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20371545	20372772	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001571;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001571;transcript_name=HG002_chrY_T0001571;gene_name=BCORP1;ID=intron:HG002_chrY_T0001571:5;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20372773	20373691	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001571;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001571;transcript_name=HG002_chrY_T0001571;gene_name=BCORP1;ID=exon:HG002_chrY_T0001571:6;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20373692	20380221	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001571;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001571;transcript_name=HG002_chrY_T0001571;gene_name=BCORP1;ID=intron:HG002_chrY_T0001571:6;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20380222	20380461	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001571;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001571;transcript_name=HG002_chrY_T0001571;gene_name=BCORP1;ID=exon:HG002_chrY_T0001571:7;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20380462	20380956	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001571;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001571;transcript_name=HG002_chrY_T0001571;gene_name=BCORP1;ID=intron:HG002_chrY_T0001571:7;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20380957	20381220	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001571;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001571;transcript_name=HG002_chrY_T0001571;gene_name=BCORP1;ID=exon:HG002_chrY_T0001571:8;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20381221	20386485	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001571;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001571;transcript_name=HG002_chrY_T0001571;gene_name=BCORP1;ID=intron:HG002_chrY_T0001571:8;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20386486	20386611	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001571;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001571;transcript_name=HG002_chrY_T0001571;gene_name=BCORP1;ID=exon:HG002_chrY_T0001571:9;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20386612	20409348	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001571;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001571;transcript_name=HG002_chrY_T0001571;gene_name=BCORP1;ID=intron:HG002_chrY_T0001571:9;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20409349	20409453	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001571;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001571;transcript_name=HG002_chrY_T0001571;gene_name=BCORP1;ID=exon:HG002_chrY_T0001571:10;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20362729	20473404	1000	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001572;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001572;gene_name=BCORP1;ID=HG002_chrY_T0001572;Name=BCORP1
HG002_chrY	CAT	exon	20362729	20363199	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001572;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001572;transcript_name=HG002_chrY_T0001572;gene_name=BCORP1;ID=exon:HG002_chrY_T0001572:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20363200	20365243	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001572;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001572;transcript_name=HG002_chrY_T0001572;gene_name=BCORP1;ID=intron:HG002_chrY_T0001572:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20365244	20365399	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001572;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001572;transcript_name=HG002_chrY_T0001572;gene_name=BCORP1;ID=exon:HG002_chrY_T0001572:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20365400	20365608	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001572;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001572;transcript_name=HG002_chrY_T0001572;gene_name=BCORP1;ID=intron:HG002_chrY_T0001572:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20365609	20365686	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001572;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001572;transcript_name=HG002_chrY_T0001572;gene_name=BCORP1;ID=exon:HG002_chrY_T0001572:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20365687	20366278	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001572;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001572;transcript_name=HG002_chrY_T0001572;gene_name=BCORP1;ID=intron:HG002_chrY_T0001572:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20366279	20366424	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001572;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001572;transcript_name=HG002_chrY_T0001572;gene_name=BCORP1;ID=exon:HG002_chrY_T0001572:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20366425	20371422	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001572;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001572;transcript_name=HG002_chrY_T0001572;gene_name=BCORP1;ID=intron:HG002_chrY_T0001572:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20371423	20371544	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001572;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001572;transcript_name=HG002_chrY_T0001572;gene_name=BCORP1;ID=exon:HG002_chrY_T0001572:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20371545	20372772	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001572;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001572;transcript_name=HG002_chrY_T0001572;gene_name=BCORP1;ID=intron:HG002_chrY_T0001572:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20372773	20373691	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001572;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001572;transcript_name=HG002_chrY_T0001572;gene_name=BCORP1;ID=exon:HG002_chrY_T0001572:5;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20373692	20380221	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001572;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001572;transcript_name=HG002_chrY_T0001572;gene_name=BCORP1;ID=intron:HG002_chrY_T0001572:5;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20380222	20380461	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001572;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001572;transcript_name=HG002_chrY_T0001572;gene_name=BCORP1;ID=exon:HG002_chrY_T0001572:6;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20380462	20380956	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001572;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001572;transcript_name=HG002_chrY_T0001572;gene_name=BCORP1;ID=intron:HG002_chrY_T0001572:6;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20380957	20381220	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001572;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001572;transcript_name=HG002_chrY_T0001572;gene_name=BCORP1;ID=exon:HG002_chrY_T0001572:7;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20381221	20386485	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001572;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001572;transcript_name=HG002_chrY_T0001572;gene_name=BCORP1;ID=intron:HG002_chrY_T0001572:7;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20386486	20386611	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001572;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001572;transcript_name=HG002_chrY_T0001572;gene_name=BCORP1;ID=exon:HG002_chrY_T0001572:8;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20386612	20473293	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001572;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001572;transcript_name=HG002_chrY_T0001572;gene_name=BCORP1;ID=intron:HG002_chrY_T0001572:8;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473404	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001572;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001572;transcript_name=HG002_chrY_T0001572;gene_name=BCORP1;ID=exon:HG002_chrY_T0001572:9;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20364364	20366424	1000	-	.	source_transcript=ENST00000840635.1;source_transcript_name=BCORP1-266;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840635.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840635.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001574;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001574;gene_name=BCORP1;ID=HG002_chrY_T0001574;Name=BCORP1
HG002_chrY	CAT	exon	20364364	20365399	.	-	.	source_transcript=ENST00000840635.1;source_transcript_name=BCORP1-266;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840635.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840635.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001574;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001574;transcript_name=HG002_chrY_T0001574;gene_name=BCORP1;ID=exon:HG002_chrY_T0001574:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20365400	20365608	.	-	.	source_transcript=ENST00000840635.1;source_transcript_name=BCORP1-266;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840635.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840635.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001574;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001574;transcript_name=HG002_chrY_T0001574;gene_name=BCORP1;ID=intron:HG002_chrY_T0001574:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20365609	20365686	.	-	.	source_transcript=ENST00000840635.1;source_transcript_name=BCORP1-266;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840635.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840635.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001574;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001574;transcript_name=HG002_chrY_T0001574;gene_name=BCORP1;ID=exon:HG002_chrY_T0001574:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20365687	20366278	.	-	.	source_transcript=ENST00000840635.1;source_transcript_name=BCORP1-266;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840635.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840635.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001574;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001574;transcript_name=HG002_chrY_T0001574;gene_name=BCORP1;ID=intron:HG002_chrY_T0001574:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20366279	20366424	.	-	.	source_transcript=ENST00000840635.1;source_transcript_name=BCORP1-266;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840635.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840635.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001574;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001574;transcript_name=HG002_chrY_T0001574;gene_name=BCORP1;ID=exon:HG002_chrY_T0001574:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20443360	20473342	1000	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001575;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001575;gene_name=BCORP1;ID=HG002_chrY_T0001575;Name=BCORP1
HG002_chrY	CAT	exon	20443360	20443524	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001575;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001575;transcript_name=HG002_chrY_T0001575;gene_name=BCORP1;ID=exon:HG002_chrY_T0001575:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20443525	20445907	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001575;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001575;transcript_name=HG002_chrY_T0001575;gene_name=BCORP1;ID=intron:HG002_chrY_T0001575:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20445908	20446134	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001575;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001575;transcript_name=HG002_chrY_T0001575;gene_name=BCORP1;ID=exon:HG002_chrY_T0001575:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20446135	20464351	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001575;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001575;transcript_name=HG002_chrY_T0001575;gene_name=BCORP1;ID=intron:HG002_chrY_T0001575:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001575;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001575;transcript_name=HG002_chrY_T0001575;gene_name=BCORP1;ID=exon:HG002_chrY_T0001575:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20473293	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001575;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001575;transcript_name=HG002_chrY_T0001575;gene_name=BCORP1;ID=intron:HG002_chrY_T0001575:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473342	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001575;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001575;transcript_name=HG002_chrY_T0001575;gene_name=BCORP1;ID=exon:HG002_chrY_T0001575:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20443361	20473319	1000	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001576;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001576;gene_name=BCORP1;ID=HG002_chrY_T0001576;Name=BCORP1
HG002_chrY	CAT	exon	20443361	20443524	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001576;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001576;transcript_name=HG002_chrY_T0001576;gene_name=BCORP1;ID=exon:HG002_chrY_T0001576:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20443525	20445907	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001576;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001576;transcript_name=HG002_chrY_T0001576;gene_name=BCORP1;ID=intron:HG002_chrY_T0001576:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20445908	20446134	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001576;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001576;transcript_name=HG002_chrY_T0001576;gene_name=BCORP1;ID=exon:HG002_chrY_T0001576:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20446135	20446502	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001576;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001576;transcript_name=HG002_chrY_T0001576;gene_name=BCORP1;ID=intron:HG002_chrY_T0001576:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20446503	20446614	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001576;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001576;transcript_name=HG002_chrY_T0001576;gene_name=BCORP1;ID=exon:HG002_chrY_T0001576:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20446615	20464351	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001576;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001576;transcript_name=HG002_chrY_T0001576;gene_name=BCORP1;ID=intron:HG002_chrY_T0001576:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001576;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001576;transcript_name=HG002_chrY_T0001576;gene_name=BCORP1;ID=exon:HG002_chrY_T0001576:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20465651	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001576;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001576;transcript_name=HG002_chrY_T0001576;gene_name=BCORP1;ID=intron:HG002_chrY_T0001576:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20465652	20465731	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001576;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001576;transcript_name=HG002_chrY_T0001576;gene_name=BCORP1;ID=exon:HG002_chrY_T0001576:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20465732	20473293	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001576;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001576;transcript_name=HG002_chrY_T0001576;gene_name=BCORP1;ID=intron:HG002_chrY_T0001576:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473319	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001576;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001576;transcript_name=HG002_chrY_T0001576;gene_name=BCORP1;ID=exon:HG002_chrY_T0001576:5;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20445749	20473356	1000	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001577;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001577;gene_name=BCORP1;ID=HG002_chrY_T0001577;Name=BCORP1
HG002_chrY	CAT	exon	20445749	20446134	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001577;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001577;transcript_name=HG002_chrY_T0001577;gene_name=BCORP1;ID=exon:HG002_chrY_T0001577:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20446135	20446502	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001577;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001577;transcript_name=HG002_chrY_T0001577;gene_name=BCORP1;ID=intron:HG002_chrY_T0001577:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20446503	20446614	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001577;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001577;transcript_name=HG002_chrY_T0001577;gene_name=BCORP1;ID=exon:HG002_chrY_T0001577:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20446615	20464335	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001577;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001577;transcript_name=HG002_chrY_T0001577;gene_name=BCORP1;ID=intron:HG002_chrY_T0001577:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464336	20464452	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001577;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001577;transcript_name=HG002_chrY_T0001577;gene_name=BCORP1;ID=exon:HG002_chrY_T0001577:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20473293	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001577;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001577;transcript_name=HG002_chrY_T0001577;gene_name=BCORP1;ID=intron:HG002_chrY_T0001577:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473356	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001577;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001577;transcript_name=HG002_chrY_T0001577;gene_name=BCORP1;ID=exon:HG002_chrY_T0001577:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20445752	20473342	1000	-	.	source_transcript=ENST00000760994.1;source_transcript_name=BCORP1-210;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760994.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001578;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001578;gene_name=BCORP1;ID=HG002_chrY_T0001578;Name=BCORP1
HG002_chrY	CAT	exon	20445752	20446134	.	-	.	source_transcript=ENST00000760994.1;source_transcript_name=BCORP1-210;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001578;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001578;transcript_name=HG002_chrY_T0001578;gene_name=BCORP1;ID=exon:HG002_chrY_T0001578:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20446135	20464351	.	-	.	source_transcript=ENST00000760994.1;source_transcript_name=BCORP1-210;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001578;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001578;transcript_name=HG002_chrY_T0001578;gene_name=BCORP1;ID=intron:HG002_chrY_T0001578:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000760994.1;source_transcript_name=BCORP1-210;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001578;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001578;transcript_name=HG002_chrY_T0001578;gene_name=BCORP1;ID=exon:HG002_chrY_T0001578:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20473293	.	-	.	source_transcript=ENST00000760994.1;source_transcript_name=BCORP1-210;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001578;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001578;transcript_name=HG002_chrY_T0001578;gene_name=BCORP1;ID=intron:HG002_chrY_T0001578:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473342	.	-	.	source_transcript=ENST00000760994.1;source_transcript_name=BCORP1-210;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001578;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001578;transcript_name=HG002_chrY_T0001578;gene_name=BCORP1;ID=exon:HG002_chrY_T0001578:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20445801	20473321	1000	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001579;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001579;gene_name=BCORP1;ID=HG002_chrY_T0001579;Name=BCORP1
HG002_chrY	CAT	exon	20445801	20446134	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001579;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001579;transcript_name=HG002_chrY_T0001579;gene_name=BCORP1;ID=exon:HG002_chrY_T0001579:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20446135	20446534	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001579;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001579;transcript_name=HG002_chrY_T0001579;gene_name=BCORP1;ID=intron:HG002_chrY_T0001579:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20446535	20446614	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001579;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001579;transcript_name=HG002_chrY_T0001579;gene_name=BCORP1;ID=exon:HG002_chrY_T0001579:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20446615	20464351	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001579;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001579;transcript_name=HG002_chrY_T0001579;gene_name=BCORP1;ID=intron:HG002_chrY_T0001579:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001579;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001579;transcript_name=HG002_chrY_T0001579;gene_name=BCORP1;ID=exon:HG002_chrY_T0001579:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20473293	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001579;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001579;transcript_name=HG002_chrY_T0001579;gene_name=BCORP1;ID=intron:HG002_chrY_T0001579:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473321	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001579;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001579;transcript_name=HG002_chrY_T0001579;gene_name=BCORP1;ID=exon:HG002_chrY_T0001579:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20445856	20473338	1000	-	.	source_transcript=ENST00000760996.1;source_transcript_name=BCORP1-212;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760996.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760996.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001580;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001580;gene_name=BCORP1;ID=HG002_chrY_T0001580;Name=BCORP1
HG002_chrY	CAT	exon	20445856	20446134	.	-	.	source_transcript=ENST00000760996.1;source_transcript_name=BCORP1-212;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760996.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760996.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001580;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001580;transcript_name=HG002_chrY_T0001580;gene_name=BCORP1;ID=exon:HG002_chrY_T0001580:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20446135	20446502	.	-	.	source_transcript=ENST00000760996.1;source_transcript_name=BCORP1-212;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760996.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760996.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001580;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001580;transcript_name=HG002_chrY_T0001580;gene_name=BCORP1;ID=intron:HG002_chrY_T0001580:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20446503	20446614	.	-	.	source_transcript=ENST00000760996.1;source_transcript_name=BCORP1-212;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760996.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760996.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001580;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001580;transcript_name=HG002_chrY_T0001580;gene_name=BCORP1;ID=exon:HG002_chrY_T0001580:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20446615	20473293	.	-	.	source_transcript=ENST00000760996.1;source_transcript_name=BCORP1-212;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760996.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760996.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001580;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001580;transcript_name=HG002_chrY_T0001580;gene_name=BCORP1;ID=intron:HG002_chrY_T0001580:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473338	.	-	.	source_transcript=ENST00000760996.1;source_transcript_name=BCORP1-212;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760996.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760996.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001580;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001580;transcript_name=HG002_chrY_T0001580;gene_name=BCORP1;ID=exon:HG002_chrY_T0001580:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20445883	20473321	1000	-	.	source_transcript=ENST00000760997.1;source_transcript_name=BCORP1-213;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760997.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760997.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001581;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001581;gene_name=BCORP1;ID=HG002_chrY_T0001581;Name=BCORP1
HG002_chrY	CAT	exon	20445883	20446134	.	-	.	source_transcript=ENST00000760997.1;source_transcript_name=BCORP1-213;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760997.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760997.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001581;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001581;transcript_name=HG002_chrY_T0001581;gene_name=BCORP1;ID=exon:HG002_chrY_T0001581:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20446135	20464335	.	-	.	source_transcript=ENST00000760997.1;source_transcript_name=BCORP1-213;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760997.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760997.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001581;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001581;transcript_name=HG002_chrY_T0001581;gene_name=BCORP1;ID=intron:HG002_chrY_T0001581:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464336	20464452	.	-	.	source_transcript=ENST00000760997.1;source_transcript_name=BCORP1-213;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760997.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760997.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001581;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001581;transcript_name=HG002_chrY_T0001581;gene_name=BCORP1;ID=exon:HG002_chrY_T0001581:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20473293	.	-	.	source_transcript=ENST00000760997.1;source_transcript_name=BCORP1-213;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760997.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760997.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001581;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001581;transcript_name=HG002_chrY_T0001581;gene_name=BCORP1;ID=intron:HG002_chrY_T0001581:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473321	.	-	.	source_transcript=ENST00000760997.1;source_transcript_name=BCORP1-213;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760997.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760997.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001581;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001581;transcript_name=HG002_chrY_T0001581;gene_name=BCORP1;ID=exon:HG002_chrY_T0001581:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20446223	20473360	1000	-	.	source_transcript=ENST00000760998.1;source_transcript_name=BCORP1-214;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760998.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760998.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001582;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001582;gene_name=BCORP1;ID=HG002_chrY_T0001582;Name=BCORP1
HG002_chrY	CAT	exon	20446223	20446614	.	-	.	source_transcript=ENST00000760998.1;source_transcript_name=BCORP1-214;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760998.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760998.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001582;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001582;transcript_name=HG002_chrY_T0001582;gene_name=BCORP1;ID=exon:HG002_chrY_T0001582:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20446615	20464351	.	-	.	source_transcript=ENST00000760998.1;source_transcript_name=BCORP1-214;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760998.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760998.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001582;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001582;transcript_name=HG002_chrY_T0001582;gene_name=BCORP1;ID=intron:HG002_chrY_T0001582:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000760998.1;source_transcript_name=BCORP1-214;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760998.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760998.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001582;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001582;transcript_name=HG002_chrY_T0001582;gene_name=BCORP1;ID=exon:HG002_chrY_T0001582:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20473293	.	-	.	source_transcript=ENST00000760998.1;source_transcript_name=BCORP1-214;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760998.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760998.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001582;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001582;transcript_name=HG002_chrY_T0001582;gene_name=BCORP1;ID=intron:HG002_chrY_T0001582:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473360	.	-	.	source_transcript=ENST00000760998.1;source_transcript_name=BCORP1-214;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760998.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760998.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001582;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001582;transcript_name=HG002_chrY_T0001582;gene_name=BCORP1;ID=exon:HG002_chrY_T0001582:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20460238	20473363	1000	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001583;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001583;gene_name=BCORP1;ID=HG002_chrY_T0001583;Name=BCORP1
HG002_chrY	CAT	exon	20460238	20463124	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001583;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001583;transcript_name=HG002_chrY_T0001583;gene_name=BCORP1;ID=exon:HG002_chrY_T0001583:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463125	20463541	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001583;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001583;transcript_name=HG002_chrY_T0001583;gene_name=BCORP1;ID=intron:HG002_chrY_T0001583:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20463542	20463601	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001583;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001583;transcript_name=HG002_chrY_T0001583;gene_name=BCORP1;ID=exon:HG002_chrY_T0001583:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463602	20464351	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001583;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001583;transcript_name=HG002_chrY_T0001583;gene_name=BCORP1;ID=intron:HG002_chrY_T0001583:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001583;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001583;transcript_name=HG002_chrY_T0001583;gene_name=BCORP1;ID=exon:HG002_chrY_T0001583:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20473293	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001583;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001583;transcript_name=HG002_chrY_T0001583;gene_name=BCORP1;ID=intron:HG002_chrY_T0001583:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473363	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001583;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001583;transcript_name=HG002_chrY_T0001583;gene_name=BCORP1;ID=exon:HG002_chrY_T0001583:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461188	20473580	1000	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001584;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001584;gene_name=BCORP1;ID=HG002_chrY_T0001584;Name=BCORP1
HG002_chrY	CAT	exon	20461188	20461866	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001584;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001584;transcript_name=HG002_chrY_T0001584;gene_name=BCORP1;ID=exon:HG002_chrY_T0001584:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20463541	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001584;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001584;transcript_name=HG002_chrY_T0001584;gene_name=BCORP1;ID=intron:HG002_chrY_T0001584:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20463542	20463601	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001584;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001584;transcript_name=HG002_chrY_T0001584;gene_name=BCORP1;ID=exon:HG002_chrY_T0001584:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463602	20464351	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001584;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001584;transcript_name=HG002_chrY_T0001584;gene_name=BCORP1;ID=intron:HG002_chrY_T0001584:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001584;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001584;transcript_name=HG002_chrY_T0001584;gene_name=BCORP1;ID=exon:HG002_chrY_T0001584:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20473293	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001584;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001584;transcript_name=HG002_chrY_T0001584;gene_name=BCORP1;ID=intron:HG002_chrY_T0001584:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473580	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001584;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001584;transcript_name=HG002_chrY_T0001584;gene_name=BCORP1;ID=exon:HG002_chrY_T0001584:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461698	20473567	1000	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001585;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001585;gene_name=BCORP1;ID=HG002_chrY_T0001585;Name=BCORP1
HG002_chrY	CAT	exon	20461698	20461866	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001585;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001585;transcript_name=HG002_chrY_T0001585;gene_name=BCORP1;ID=exon:HG002_chrY_T0001585:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20463541	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001585;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001585;transcript_name=HG002_chrY_T0001585;gene_name=BCORP1;ID=intron:HG002_chrY_T0001585:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20463542	20463601	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001585;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001585;transcript_name=HG002_chrY_T0001585;gene_name=BCORP1;ID=exon:HG002_chrY_T0001585:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463602	20464335	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001585;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001585;transcript_name=HG002_chrY_T0001585;gene_name=BCORP1;ID=intron:HG002_chrY_T0001585:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464336	20464452	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001585;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001585;transcript_name=HG002_chrY_T0001585;gene_name=BCORP1;ID=exon:HG002_chrY_T0001585:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20473293	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001585;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001585;transcript_name=HG002_chrY_T0001585;gene_name=BCORP1;ID=intron:HG002_chrY_T0001585:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473567	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001585;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001585;transcript_name=HG002_chrY_T0001585;gene_name=BCORP1;ID=exon:HG002_chrY_T0001585:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461700	20473576	1000	-	.	source_transcript=ENST00000761001.1;source_transcript_name=BCORP1-217;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761001.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761001.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001586;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001586;gene_name=BCORP1;ID=HG002_chrY_T0001586;Name=BCORP1
HG002_chrY	CAT	exon	20461700	20461866	.	-	.	source_transcript=ENST00000761001.1;source_transcript_name=BCORP1-217;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761001.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761001.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001586;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001586;transcript_name=HG002_chrY_T0001586;gene_name=BCORP1;ID=exon:HG002_chrY_T0001586:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20464335	.	-	.	source_transcript=ENST00000761001.1;source_transcript_name=BCORP1-217;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761001.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761001.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001586;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001586;transcript_name=HG002_chrY_T0001586;gene_name=BCORP1;ID=intron:HG002_chrY_T0001586:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464336	20464452	.	-	.	source_transcript=ENST00000761001.1;source_transcript_name=BCORP1-217;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761001.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761001.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001586;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001586;transcript_name=HG002_chrY_T0001586;gene_name=BCORP1;ID=exon:HG002_chrY_T0001586:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20473293	.	-	.	source_transcript=ENST00000761001.1;source_transcript_name=BCORP1-217;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761001.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761001.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001586;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001586;transcript_name=HG002_chrY_T0001586;gene_name=BCORP1;ID=intron:HG002_chrY_T0001586:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473576	.	-	.	source_transcript=ENST00000761001.1;source_transcript_name=BCORP1-217;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761001.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761001.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001586;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001586;transcript_name=HG002_chrY_T0001586;gene_name=BCORP1;ID=exon:HG002_chrY_T0001586:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461700	20473576	1000	-	.	source_transcript=ENST00000761002.1;source_transcript_name=BCORP1-218;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761002.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001587;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001587;gene_name=BCORP1;ID=HG002_chrY_T0001587;Name=BCORP1
HG002_chrY	CAT	exon	20461700	20461866	.	-	.	source_transcript=ENST00000761002.1;source_transcript_name=BCORP1-218;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761002.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001587;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001587;transcript_name=HG002_chrY_T0001587;gene_name=BCORP1;ID=exon:HG002_chrY_T0001587:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20464351	.	-	.	source_transcript=ENST00000761002.1;source_transcript_name=BCORP1-218;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761002.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001587;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001587;transcript_name=HG002_chrY_T0001587;gene_name=BCORP1;ID=intron:HG002_chrY_T0001587:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000761002.1;source_transcript_name=BCORP1-218;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761002.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001587;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001587;transcript_name=HG002_chrY_T0001587;gene_name=BCORP1;ID=exon:HG002_chrY_T0001587:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20473293	.	-	.	source_transcript=ENST00000761002.1;source_transcript_name=BCORP1-218;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761002.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001587;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001587;transcript_name=HG002_chrY_T0001587;gene_name=BCORP1;ID=intron:HG002_chrY_T0001587:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473576	.	-	.	source_transcript=ENST00000761002.1;source_transcript_name=BCORP1-218;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761002.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001587;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001587;transcript_name=HG002_chrY_T0001587;gene_name=BCORP1;ID=exon:HG002_chrY_T0001587:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473342	1000	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001588;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001588;gene_name=BCORP1;ID=HG002_chrY_T0001588;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001588;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001588;transcript_name=HG002_chrY_T0001588;gene_name=BCORP1;ID=exon:HG002_chrY_T0001588:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20462322	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001588;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001588;transcript_name=HG002_chrY_T0001588;gene_name=BCORP1;ID=intron:HG002_chrY_T0001588:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20462323	20462501	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001588;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001588;transcript_name=HG002_chrY_T0001588;gene_name=BCORP1;ID=exon:HG002_chrY_T0001588:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20462502	20464335	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001588;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001588;transcript_name=HG002_chrY_T0001588;gene_name=BCORP1;ID=intron:HG002_chrY_T0001588:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464336	20464452	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001588;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001588;transcript_name=HG002_chrY_T0001588;gene_name=BCORP1;ID=exon:HG002_chrY_T0001588:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20473293	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001588;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001588;transcript_name=HG002_chrY_T0001588;gene_name=BCORP1;ID=intron:HG002_chrY_T0001588:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473342	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001588;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001588;transcript_name=HG002_chrY_T0001588;gene_name=BCORP1;ID=exon:HG002_chrY_T0001588:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473347	1000	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001589;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001589;gene_name=BCORP1;ID=HG002_chrY_T0001589;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001589;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001589;transcript_name=HG002_chrY_T0001589;gene_name=BCORP1;ID=exon:HG002_chrY_T0001589:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20462161	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001589;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001589;transcript_name=HG002_chrY_T0001589;gene_name=BCORP1;ID=intron:HG002_chrY_T0001589:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20462162	20462280	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001589;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001589;transcript_name=HG002_chrY_T0001589;gene_name=BCORP1;ID=exon:HG002_chrY_T0001589:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20462281	20464351	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001589;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001589;transcript_name=HG002_chrY_T0001589;gene_name=BCORP1;ID=intron:HG002_chrY_T0001589:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001589;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001589;transcript_name=HG002_chrY_T0001589;gene_name=BCORP1;ID=exon:HG002_chrY_T0001589:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20473293	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001589;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001589;transcript_name=HG002_chrY_T0001589;gene_name=BCORP1;ID=intron:HG002_chrY_T0001589:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473347	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001589;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001589;transcript_name=HG002_chrY_T0001589;gene_name=BCORP1;ID=exon:HG002_chrY_T0001589:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473554	1000	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001590;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001590;gene_name=BCORP1;ID=HG002_chrY_T0001590;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001590;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001590;transcript_name=HG002_chrY_T0001590;gene_name=BCORP1;ID=exon:HG002_chrY_T0001590:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20463541	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001590;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001590;transcript_name=HG002_chrY_T0001590;gene_name=BCORP1;ID=intron:HG002_chrY_T0001590:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20463542	20463601	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001590;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001590;transcript_name=HG002_chrY_T0001590;gene_name=BCORP1;ID=exon:HG002_chrY_T0001590:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463602	20464351	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001590;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001590;transcript_name=HG002_chrY_T0001590;gene_name=BCORP1;ID=intron:HG002_chrY_T0001590:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001590;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001590;transcript_name=HG002_chrY_T0001590;gene_name=BCORP1;ID=exon:HG002_chrY_T0001590:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20464925	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001590;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001590;transcript_name=HG002_chrY_T0001590;gene_name=BCORP1;ID=intron:HG002_chrY_T0001590:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464926	20465006	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001590;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001590;transcript_name=HG002_chrY_T0001590;gene_name=BCORP1;ID=exon:HG002_chrY_T0001590:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20465007	20473293	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001590;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001590;transcript_name=HG002_chrY_T0001590;gene_name=BCORP1;ID=intron:HG002_chrY_T0001590:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473554	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001590;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001590;transcript_name=HG002_chrY_T0001590;gene_name=BCORP1;ID=exon:HG002_chrY_T0001590:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473410	1000	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001591;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001591;gene_name=BCORP1;ID=HG002_chrY_T0001591;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001591;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001591;transcript_name=HG002_chrY_T0001591;gene_name=BCORP1;ID=exon:HG002_chrY_T0001591:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20462161	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001591;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001591;transcript_name=HG002_chrY_T0001591;gene_name=BCORP1;ID=intron:HG002_chrY_T0001591:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20462162	20462276	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001591;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001591;transcript_name=HG002_chrY_T0001591;gene_name=BCORP1;ID=exon:HG002_chrY_T0001591:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20462277	20464351	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001591;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001591;transcript_name=HG002_chrY_T0001591;gene_name=BCORP1;ID=intron:HG002_chrY_T0001591:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001591;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001591;transcript_name=HG002_chrY_T0001591;gene_name=BCORP1;ID=exon:HG002_chrY_T0001591:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20473293	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001591;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001591;transcript_name=HG002_chrY_T0001591;gene_name=BCORP1;ID=intron:HG002_chrY_T0001591:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473410	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001591;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001591;transcript_name=HG002_chrY_T0001591;gene_name=BCORP1;ID=exon:HG002_chrY_T0001591:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473356	1000	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001592;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001592;gene_name=BCORP1;ID=HG002_chrY_T0001592;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001592;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001592;transcript_name=HG002_chrY_T0001592;gene_name=BCORP1;ID=exon:HG002_chrY_T0001592:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20463541	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001592;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001592;transcript_name=HG002_chrY_T0001592;gene_name=BCORP1;ID=intron:HG002_chrY_T0001592:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20463542	20463601	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001592;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001592;transcript_name=HG002_chrY_T0001592;gene_name=BCORP1;ID=exon:HG002_chrY_T0001592:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463602	20464335	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001592;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001592;transcript_name=HG002_chrY_T0001592;gene_name=BCORP1;ID=intron:HG002_chrY_T0001592:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464336	20464452	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001592;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001592;transcript_name=HG002_chrY_T0001592;gene_name=BCORP1;ID=exon:HG002_chrY_T0001592:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20464925	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001592;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001592;transcript_name=HG002_chrY_T0001592;gene_name=BCORP1;ID=intron:HG002_chrY_T0001592:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464926	20465006	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001592;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001592;transcript_name=HG002_chrY_T0001592;gene_name=BCORP1;ID=exon:HG002_chrY_T0001592:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20465007	20473293	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001592;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001592;transcript_name=HG002_chrY_T0001592;gene_name=BCORP1;ID=intron:HG002_chrY_T0001592:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473356	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001592;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001592;transcript_name=HG002_chrY_T0001592;gene_name=BCORP1;ID=exon:HG002_chrY_T0001592:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473528	1000	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001593;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001593;gene_name=BCORP1;ID=HG002_chrY_T0001593;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001593;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001593;transcript_name=HG002_chrY_T0001593;gene_name=BCORP1;ID=exon:HG002_chrY_T0001593:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20463541	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001593;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001593;transcript_name=HG002_chrY_T0001593;gene_name=BCORP1;ID=intron:HG002_chrY_T0001593:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20463542	20463601	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001593;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001593;transcript_name=HG002_chrY_T0001593;gene_name=BCORP1;ID=exon:HG002_chrY_T0001593:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463602	20464351	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001593;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001593;transcript_name=HG002_chrY_T0001593;gene_name=BCORP1;ID=intron:HG002_chrY_T0001593:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001593;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001593;transcript_name=HG002_chrY_T0001593;gene_name=BCORP1;ID=exon:HG002_chrY_T0001593:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20465651	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001593;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001593;transcript_name=HG002_chrY_T0001593;gene_name=BCORP1;ID=intron:HG002_chrY_T0001593:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20465652	20465731	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001593;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001593;transcript_name=HG002_chrY_T0001593;gene_name=BCORP1;ID=exon:HG002_chrY_T0001593:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20465732	20473293	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001593;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001593;transcript_name=HG002_chrY_T0001593;gene_name=BCORP1;ID=intron:HG002_chrY_T0001593:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473528	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001593;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001593;transcript_name=HG002_chrY_T0001593;gene_name=BCORP1;ID=exon:HG002_chrY_T0001593:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473321	1000	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001594;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001594;gene_name=BCORP1;ID=HG002_chrY_T0001594;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001594;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001594;transcript_name=HG002_chrY_T0001594;gene_name=BCORP1;ID=exon:HG002_chrY_T0001594:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20462161	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001594;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001594;transcript_name=HG002_chrY_T0001594;gene_name=BCORP1;ID=intron:HG002_chrY_T0001594:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20462162	20462276	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001594;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001594;transcript_name=HG002_chrY_T0001594;gene_name=BCORP1;ID=exon:HG002_chrY_T0001594:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20462277	20464351	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001594;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001594;transcript_name=HG002_chrY_T0001594;gene_name=BCORP1;ID=intron:HG002_chrY_T0001594:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001594;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001594;transcript_name=HG002_chrY_T0001594;gene_name=BCORP1;ID=exon:HG002_chrY_T0001594:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20465651	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001594;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001594;transcript_name=HG002_chrY_T0001594;gene_name=BCORP1;ID=intron:HG002_chrY_T0001594:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20465652	20465731	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001594;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001594;transcript_name=HG002_chrY_T0001594;gene_name=BCORP1;ID=exon:HG002_chrY_T0001594:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20465732	20473293	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001594;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001594;transcript_name=HG002_chrY_T0001594;gene_name=BCORP1;ID=intron:HG002_chrY_T0001594:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473321	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001594;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001594;transcript_name=HG002_chrY_T0001594;gene_name=BCORP1;ID=exon:HG002_chrY_T0001594:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473582	1000	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001595;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001595;gene_name=BCORP1;ID=HG002_chrY_T0001595;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001595;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001595;transcript_name=HG002_chrY_T0001595;gene_name=BCORP1;ID=exon:HG002_chrY_T0001595:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20464351	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001595;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001595;transcript_name=HG002_chrY_T0001595;gene_name=BCORP1;ID=intron:HG002_chrY_T0001595:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001595;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001595;transcript_name=HG002_chrY_T0001595;gene_name=BCORP1;ID=exon:HG002_chrY_T0001595:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20465651	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001595;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001595;transcript_name=HG002_chrY_T0001595;gene_name=BCORP1;ID=intron:HG002_chrY_T0001595:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20465652	20465731	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001595;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001595;transcript_name=HG002_chrY_T0001595;gene_name=BCORP1;ID=exon:HG002_chrY_T0001595:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20465732	20473293	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001595;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001595;transcript_name=HG002_chrY_T0001595;gene_name=BCORP1;ID=intron:HG002_chrY_T0001595:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473582	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001595;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001595;transcript_name=HG002_chrY_T0001595;gene_name=BCORP1;ID=exon:HG002_chrY_T0001595:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473321	1000	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001596;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001596;gene_name=BCORP1;ID=HG002_chrY_T0001596;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001596;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001596;transcript_name=HG002_chrY_T0001596;gene_name=BCORP1;ID=exon:HG002_chrY_T0001596:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20463541	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001596;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001596;transcript_name=HG002_chrY_T0001596;gene_name=BCORP1;ID=intron:HG002_chrY_T0001596:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20463542	20463601	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001596;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001596;transcript_name=HG002_chrY_T0001596;gene_name=BCORP1;ID=exon:HG002_chrY_T0001596:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463602	20464335	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001596;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001596;transcript_name=HG002_chrY_T0001596;gene_name=BCORP1;ID=intron:HG002_chrY_T0001596:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464336	20464452	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001596;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001596;transcript_name=HG002_chrY_T0001596;gene_name=BCORP1;ID=exon:HG002_chrY_T0001596:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20464925	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001596;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001596;transcript_name=HG002_chrY_T0001596;gene_name=BCORP1;ID=intron:HG002_chrY_T0001596:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464926	20465000	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001596;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001596;transcript_name=HG002_chrY_T0001596;gene_name=BCORP1;ID=exon:HG002_chrY_T0001596:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20465001	20473293	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001596;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001596;transcript_name=HG002_chrY_T0001596;gene_name=BCORP1;ID=intron:HG002_chrY_T0001596:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473321	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001596;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001596;transcript_name=HG002_chrY_T0001596;gene_name=BCORP1;ID=exon:HG002_chrY_T0001596:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473351	1000	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001597;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001597;gene_name=BCORP1;ID=HG002_chrY_T0001597;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001597;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001597;transcript_name=HG002_chrY_T0001597;gene_name=BCORP1;ID=exon:HG002_chrY_T0001597:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20462161	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001597;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001597;transcript_name=HG002_chrY_T0001597;gene_name=BCORP1;ID=intron:HG002_chrY_T0001597:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20462162	20462276	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001597;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001597;transcript_name=HG002_chrY_T0001597;gene_name=BCORP1;ID=exon:HG002_chrY_T0001597:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20462277	20462367	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001597;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001597;transcript_name=HG002_chrY_T0001597;gene_name=BCORP1;ID=intron:HG002_chrY_T0001597:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20462368	20462496	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001597;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001597;transcript_name=HG002_chrY_T0001597;gene_name=BCORP1;ID=exon:HG002_chrY_T0001597:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20462497	20463541	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001597;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001597;transcript_name=HG002_chrY_T0001597;gene_name=BCORP1;ID=intron:HG002_chrY_T0001597:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20463542	20463601	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001597;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001597;transcript_name=HG002_chrY_T0001597;gene_name=BCORP1;ID=exon:HG002_chrY_T0001597:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463602	20464335	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001597;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001597;transcript_name=HG002_chrY_T0001597;gene_name=BCORP1;ID=intron:HG002_chrY_T0001597:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464336	20464452	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001597;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001597;transcript_name=HG002_chrY_T0001597;gene_name=BCORP1;ID=exon:HG002_chrY_T0001597:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20473293	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001597;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001597;transcript_name=HG002_chrY_T0001597;gene_name=BCORP1;ID=intron:HG002_chrY_T0001597:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473351	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001597;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001597;transcript_name=HG002_chrY_T0001597;gene_name=BCORP1;ID=exon:HG002_chrY_T0001597:5;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473356	1000	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001598;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001598;gene_name=BCORP1;ID=HG002_chrY_T0001598;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20462501	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001598;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001598;transcript_name=HG002_chrY_T0001598;gene_name=BCORP1;ID=exon:HG002_chrY_T0001598:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20462502	20463541	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001598;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001598;transcript_name=HG002_chrY_T0001598;gene_name=BCORP1;ID=intron:HG002_chrY_T0001598:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20463542	20463601	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001598;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001598;transcript_name=HG002_chrY_T0001598;gene_name=BCORP1;ID=exon:HG002_chrY_T0001598:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463602	20464335	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001598;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001598;transcript_name=HG002_chrY_T0001598;gene_name=BCORP1;ID=intron:HG002_chrY_T0001598:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464336	20464452	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001598;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001598;transcript_name=HG002_chrY_T0001598;gene_name=BCORP1;ID=exon:HG002_chrY_T0001598:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20473293	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001598;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001598;transcript_name=HG002_chrY_T0001598;gene_name=BCORP1;ID=intron:HG002_chrY_T0001598:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473356	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001598;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001598;transcript_name=HG002_chrY_T0001598;gene_name=BCORP1;ID=exon:HG002_chrY_T0001598:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473319	1000	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001599;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001599;gene_name=BCORP1;ID=HG002_chrY_T0001599;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001599;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001599;transcript_name=HG002_chrY_T0001599;gene_name=BCORP1;ID=exon:HG002_chrY_T0001599:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20462322	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001599;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001599;transcript_name=HG002_chrY_T0001599;gene_name=BCORP1;ID=intron:HG002_chrY_T0001599:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20462323	20462421	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001599;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001599;transcript_name=HG002_chrY_T0001599;gene_name=BCORP1;ID=exon:HG002_chrY_T0001599:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20462422	20463541	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001599;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001599;transcript_name=HG002_chrY_T0001599;gene_name=BCORP1;ID=intron:HG002_chrY_T0001599:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20463542	20463601	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001599;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001599;transcript_name=HG002_chrY_T0001599;gene_name=BCORP1;ID=exon:HG002_chrY_T0001599:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463602	20464335	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001599;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001599;transcript_name=HG002_chrY_T0001599;gene_name=BCORP1;ID=intron:HG002_chrY_T0001599:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464336	20464452	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001599;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001599;transcript_name=HG002_chrY_T0001599;gene_name=BCORP1;ID=exon:HG002_chrY_T0001599:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20473293	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001599;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001599;transcript_name=HG002_chrY_T0001599;gene_name=BCORP1;ID=intron:HG002_chrY_T0001599:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473319	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001599;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001599;transcript_name=HG002_chrY_T0001599;gene_name=BCORP1;ID=exon:HG002_chrY_T0001599:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473321	1000	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001600;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001600;gene_name=BCORP1;ID=HG002_chrY_T0001600;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001600;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001600;transcript_name=HG002_chrY_T0001600;gene_name=BCORP1;ID=exon:HG002_chrY_T0001600:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20463541	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001600;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001600;transcript_name=HG002_chrY_T0001600;gene_name=BCORP1;ID=intron:HG002_chrY_T0001600:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20463542	20463601	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001600;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001600;transcript_name=HG002_chrY_T0001600;gene_name=BCORP1;ID=exon:HG002_chrY_T0001600:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463602	20464351	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001600;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001600;transcript_name=HG002_chrY_T0001600;gene_name=BCORP1;ID=intron:HG002_chrY_T0001600:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001600;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001600;transcript_name=HG002_chrY_T0001600;gene_name=BCORP1;ID=exon:HG002_chrY_T0001600:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20465651	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001600;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001600;transcript_name=HG002_chrY_T0001600;gene_name=BCORP1;ID=intron:HG002_chrY_T0001600:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20465652	20465736	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001600;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001600;transcript_name=HG002_chrY_T0001600;gene_name=BCORP1;ID=exon:HG002_chrY_T0001600:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20465737	20473293	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001600;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001600;transcript_name=HG002_chrY_T0001600;gene_name=BCORP1;ID=intron:HG002_chrY_T0001600:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473321	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001600;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001600;transcript_name=HG002_chrY_T0001600;gene_name=BCORP1;ID=exon:HG002_chrY_T0001600:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473336	1000	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001601;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001601;gene_name=BCORP1;ID=HG002_chrY_T0001601;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001601;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001601;transcript_name=HG002_chrY_T0001601;gene_name=BCORP1;ID=exon:HG002_chrY_T0001601:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20463541	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001601;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001601;transcript_name=HG002_chrY_T0001601;gene_name=BCORP1;ID=intron:HG002_chrY_T0001601:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20463542	20463601	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001601;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001601;transcript_name=HG002_chrY_T0001601;gene_name=BCORP1;ID=exon:HG002_chrY_T0001601:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463602	20464186	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001601;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001601;transcript_name=HG002_chrY_T0001601;gene_name=BCORP1;ID=intron:HG002_chrY_T0001601:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464187	20464288	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001601;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001601;transcript_name=HG002_chrY_T0001601;gene_name=BCORP1;ID=exon:HG002_chrY_T0001601:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464289	20473293	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001601;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001601;transcript_name=HG002_chrY_T0001601;gene_name=BCORP1;ID=intron:HG002_chrY_T0001601:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473336	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001601;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001601;transcript_name=HG002_chrY_T0001601;gene_name=BCORP1;ID=exon:HG002_chrY_T0001601:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473556	1000	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001602;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001602;gene_name=BCORP1;ID=HG002_chrY_T0001602;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001602;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001602;transcript_name=HG002_chrY_T0001602;gene_name=BCORP1;ID=exon:HG002_chrY_T0001602:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20464351	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001602;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001602;transcript_name=HG002_chrY_T0001602;gene_name=BCORP1;ID=intron:HG002_chrY_T0001602:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001602;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001602;transcript_name=HG002_chrY_T0001602;gene_name=BCORP1;ID=exon:HG002_chrY_T0001602:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20464925	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001602;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001602;transcript_name=HG002_chrY_T0001602;gene_name=BCORP1;ID=intron:HG002_chrY_T0001602:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464926	20465006	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001602;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001602;transcript_name=HG002_chrY_T0001602;gene_name=BCORP1;ID=exon:HG002_chrY_T0001602:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20465007	20473293	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001602;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001602;transcript_name=HG002_chrY_T0001602;gene_name=BCORP1;ID=intron:HG002_chrY_T0001602:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473556	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001602;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001602;transcript_name=HG002_chrY_T0001602;gene_name=BCORP1;ID=exon:HG002_chrY_T0001602:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473319	1000	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001603;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001603;gene_name=BCORP1;ID=HG002_chrY_T0001603;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001603;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001603;transcript_name=HG002_chrY_T0001603;gene_name=BCORP1;ID=exon:HG002_chrY_T0001603:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20463541	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001603;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001603;transcript_name=HG002_chrY_T0001603;gene_name=BCORP1;ID=intron:HG002_chrY_T0001603:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20463542	20463601	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001603;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001603;transcript_name=HG002_chrY_T0001603;gene_name=BCORP1;ID=exon:HG002_chrY_T0001603:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463602	20464335	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001603;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001603;transcript_name=HG002_chrY_T0001603;gene_name=BCORP1;ID=intron:HG002_chrY_T0001603:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464336	20464452	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001603;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001603;transcript_name=HG002_chrY_T0001603;gene_name=BCORP1;ID=exon:HG002_chrY_T0001603:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20465651	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001603;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001603;transcript_name=HG002_chrY_T0001603;gene_name=BCORP1;ID=intron:HG002_chrY_T0001603:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20465652	20465736	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001603;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001603;transcript_name=HG002_chrY_T0001603;gene_name=BCORP1;ID=exon:HG002_chrY_T0001603:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20465737	20473293	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001603;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001603;transcript_name=HG002_chrY_T0001603;gene_name=BCORP1;ID=intron:HG002_chrY_T0001603:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473319	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001603;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001603;transcript_name=HG002_chrY_T0001603;gene_name=BCORP1;ID=exon:HG002_chrY_T0001603:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473326	1000	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001604;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001604;gene_name=BCORP1;ID=HG002_chrY_T0001604;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001604;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001604;transcript_name=HG002_chrY_T0001604;gene_name=BCORP1;ID=exon:HG002_chrY_T0001604:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20463541	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001604;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001604;transcript_name=HG002_chrY_T0001604;gene_name=BCORP1;ID=intron:HG002_chrY_T0001604:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20463542	20463601	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001604;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001604;transcript_name=HG002_chrY_T0001604;gene_name=BCORP1;ID=exon:HG002_chrY_T0001604:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463602	20464351	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001604;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001604;transcript_name=HG002_chrY_T0001604;gene_name=BCORP1;ID=intron:HG002_chrY_T0001604:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001604;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001604;transcript_name=HG002_chrY_T0001604;gene_name=BCORP1;ID=exon:HG002_chrY_T0001604:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20464925	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001604;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001604;transcript_name=HG002_chrY_T0001604;gene_name=BCORP1;ID=intron:HG002_chrY_T0001604:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464926	20464981	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001604;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001604;transcript_name=HG002_chrY_T0001604;gene_name=BCORP1;ID=exon:HG002_chrY_T0001604:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464982	20465651	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001604;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001604;transcript_name=HG002_chrY_T0001604;gene_name=BCORP1;ID=intron:HG002_chrY_T0001604:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20465652	20465731	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001604;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001604;transcript_name=HG002_chrY_T0001604;gene_name=BCORP1;ID=exon:HG002_chrY_T0001604:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20465732	20473293	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001604;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001604;transcript_name=HG002_chrY_T0001604;gene_name=BCORP1;ID=intron:HG002_chrY_T0001604:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473326	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001604;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001604;transcript_name=HG002_chrY_T0001604;gene_name=BCORP1;ID=exon:HG002_chrY_T0001604:5;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473560	1000	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001605;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001605;gene_name=BCORP1;ID=HG002_chrY_T0001605;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001605;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001605;transcript_name=HG002_chrY_T0001605;gene_name=BCORP1;ID=exon:HG002_chrY_T0001605:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20464335	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001605;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001605;transcript_name=HG002_chrY_T0001605;gene_name=BCORP1;ID=intron:HG002_chrY_T0001605:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464336	20464452	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001605;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001605;transcript_name=HG002_chrY_T0001605;gene_name=BCORP1;ID=exon:HG002_chrY_T0001605:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20465651	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001605;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001605;transcript_name=HG002_chrY_T0001605;gene_name=BCORP1;ID=intron:HG002_chrY_T0001605:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20465652	20465731	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001605;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001605;transcript_name=HG002_chrY_T0001605;gene_name=BCORP1;ID=exon:HG002_chrY_T0001605:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20465732	20473293	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001605;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001605;transcript_name=HG002_chrY_T0001605;gene_name=BCORP1;ID=intron:HG002_chrY_T0001605:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473560	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001605;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001605;transcript_name=HG002_chrY_T0001605;gene_name=BCORP1;ID=exon:HG002_chrY_T0001605:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473349	1000	-	.	source_transcript=ENST00000761024.1;source_transcript_name=BCORP1-240;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761024.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761024.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001606;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001606;gene_name=BCORP1;ID=HG002_chrY_T0001606;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761024.1;source_transcript_name=BCORP1-240;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761024.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761024.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001606;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001606;transcript_name=HG002_chrY_T0001606;gene_name=BCORP1;ID=exon:HG002_chrY_T0001606:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20464335	.	-	.	source_transcript=ENST00000761024.1;source_transcript_name=BCORP1-240;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761024.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761024.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001606;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001606;transcript_name=HG002_chrY_T0001606;gene_name=BCORP1;ID=intron:HG002_chrY_T0001606:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464336	20464452	.	-	.	source_transcript=ENST00000761024.1;source_transcript_name=BCORP1-240;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761024.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761024.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001606;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001606;transcript_name=HG002_chrY_T0001606;gene_name=BCORP1;ID=exon:HG002_chrY_T0001606:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20473288	.	-	.	source_transcript=ENST00000761024.1;source_transcript_name=BCORP1-240;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761024.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761024.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001606;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001606;transcript_name=HG002_chrY_T0001606;gene_name=BCORP1;ID=intron:HG002_chrY_T0001606:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473289	20473349	.	-	.	source_transcript=ENST00000761024.1;source_transcript_name=BCORP1-240;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761024.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761024.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001606;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001606;transcript_name=HG002_chrY_T0001606;gene_name=BCORP1;ID=exon:HG002_chrY_T0001606:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473356	1000	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001607;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001607;gene_name=BCORP1;ID=HG002_chrY_T0001607;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001607;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001607;transcript_name=HG002_chrY_T0001607;gene_name=BCORP1;ID=exon:HG002_chrY_T0001607:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20463541	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001607;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001607;transcript_name=HG002_chrY_T0001607;gene_name=BCORP1;ID=intron:HG002_chrY_T0001607:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20463542	20463601	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001607;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001607;transcript_name=HG002_chrY_T0001607;gene_name=BCORP1;ID=exon:HG002_chrY_T0001607:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463602	20464335	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001607;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001607;transcript_name=HG002_chrY_T0001607;gene_name=BCORP1;ID=intron:HG002_chrY_T0001607:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464336	20464452	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001607;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001607;transcript_name=HG002_chrY_T0001607;gene_name=BCORP1;ID=exon:HG002_chrY_T0001607:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20465651	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001607;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001607;transcript_name=HG002_chrY_T0001607;gene_name=BCORP1;ID=intron:HG002_chrY_T0001607:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20465652	20465731	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001607;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001607;transcript_name=HG002_chrY_T0001607;gene_name=BCORP1;ID=exon:HG002_chrY_T0001607:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20465732	20473293	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001607;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001607;transcript_name=HG002_chrY_T0001607;gene_name=BCORP1;ID=intron:HG002_chrY_T0001607:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473356	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001607;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001607;transcript_name=HG002_chrY_T0001607;gene_name=BCORP1;ID=exon:HG002_chrY_T0001607:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473347	1000	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001608;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001608;gene_name=BCORP1;ID=HG002_chrY_T0001608;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001608;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001608;transcript_name=HG002_chrY_T0001608;gene_name=BCORP1;ID=exon:HG002_chrY_T0001608:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20462161	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001608;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001608;transcript_name=HG002_chrY_T0001608;gene_name=BCORP1;ID=intron:HG002_chrY_T0001608:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20462162	20462276	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001608;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001608;transcript_name=HG002_chrY_T0001608;gene_name=BCORP1;ID=exon:HG002_chrY_T0001608:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20462277	20462367	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001608;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001608;transcript_name=HG002_chrY_T0001608;gene_name=BCORP1;ID=intron:HG002_chrY_T0001608:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20462368	20462421	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001608;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001608;transcript_name=HG002_chrY_T0001608;gene_name=BCORP1;ID=exon:HG002_chrY_T0001608:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20462422	20463541	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001608;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001608;transcript_name=HG002_chrY_T0001608;gene_name=BCORP1;ID=intron:HG002_chrY_T0001608:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20463542	20463601	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001608;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001608;transcript_name=HG002_chrY_T0001608;gene_name=BCORP1;ID=exon:HG002_chrY_T0001608:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463602	20464335	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001608;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001608;transcript_name=HG002_chrY_T0001608;gene_name=BCORP1;ID=intron:HG002_chrY_T0001608:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464336	20464452	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001608;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001608;transcript_name=HG002_chrY_T0001608;gene_name=BCORP1;ID=exon:HG002_chrY_T0001608:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20464925	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001608;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001608;transcript_name=HG002_chrY_T0001608;gene_name=BCORP1;ID=intron:HG002_chrY_T0001608:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464926	20465006	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001608;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001608;transcript_name=HG002_chrY_T0001608;gene_name=BCORP1;ID=exon:HG002_chrY_T0001608:5;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20465007	20473293	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001608;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001608;transcript_name=HG002_chrY_T0001608;gene_name=BCORP1;ID=intron:HG002_chrY_T0001608:5;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473347	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001608;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001608;transcript_name=HG002_chrY_T0001608;gene_name=BCORP1;ID=exon:HG002_chrY_T0001608:6;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473347	1000	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001609;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001609;gene_name=BCORP1;ID=HG002_chrY_T0001609;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001609;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001609;transcript_name=HG002_chrY_T0001609;gene_name=BCORP1;ID=exon:HG002_chrY_T0001609:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20462161	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001609;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001609;transcript_name=HG002_chrY_T0001609;gene_name=BCORP1;ID=intron:HG002_chrY_T0001609:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20462162	20462276	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001609;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001609;transcript_name=HG002_chrY_T0001609;gene_name=BCORP1;ID=exon:HG002_chrY_T0001609:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20462277	20464335	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001609;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001609;transcript_name=HG002_chrY_T0001609;gene_name=BCORP1;ID=intron:HG002_chrY_T0001609:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464336	20464452	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001609;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001609;transcript_name=HG002_chrY_T0001609;gene_name=BCORP1;ID=exon:HG002_chrY_T0001609:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20473293	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001609;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001609;transcript_name=HG002_chrY_T0001609;gene_name=BCORP1;ID=intron:HG002_chrY_T0001609:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473347	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001609;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001609;transcript_name=HG002_chrY_T0001609;gene_name=BCORP1;ID=exon:HG002_chrY_T0001609:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473533	1000	-	.	source_transcript=ENST00000761009.1;source_transcript_name=BCORP1-225;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761009.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001610;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001610;gene_name=BCORP1;ID=HG002_chrY_T0001610;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761009.1;source_transcript_name=BCORP1-225;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001610;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001610;transcript_name=HG002_chrY_T0001610;gene_name=BCORP1;ID=exon:HG002_chrY_T0001610:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20473293	.	-	.	source_transcript=ENST00000761009.1;source_transcript_name=BCORP1-225;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001610;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001610;transcript_name=HG002_chrY_T0001610;gene_name=BCORP1;ID=intron:HG002_chrY_T0001610:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473533	.	-	.	source_transcript=ENST00000761009.1;source_transcript_name=BCORP1-225;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001610;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001610;transcript_name=HG002_chrY_T0001610;gene_name=BCORP1;ID=exon:HG002_chrY_T0001610:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473319	1000	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001611;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001611;gene_name=BCORP1;ID=HG002_chrY_T0001611;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001611;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001611;transcript_name=HG002_chrY_T0001611;gene_name=BCORP1;ID=exon:HG002_chrY_T0001611:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20462161	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001611;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001611;transcript_name=HG002_chrY_T0001611;gene_name=BCORP1;ID=intron:HG002_chrY_T0001611:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20462162	20462276	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001611;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001611;transcript_name=HG002_chrY_T0001611;gene_name=BCORP1;ID=exon:HG002_chrY_T0001611:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20462277	20464351	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001611;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001611;transcript_name=HG002_chrY_T0001611;gene_name=BCORP1;ID=intron:HG002_chrY_T0001611:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001611;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001611;transcript_name=HG002_chrY_T0001611;gene_name=BCORP1;ID=exon:HG002_chrY_T0001611:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20464925	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001611;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001611;transcript_name=HG002_chrY_T0001611;gene_name=BCORP1;ID=intron:HG002_chrY_T0001611:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464926	20464981	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001611;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001611;transcript_name=HG002_chrY_T0001611;gene_name=BCORP1;ID=exon:HG002_chrY_T0001611:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464982	20473293	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001611;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001611;transcript_name=HG002_chrY_T0001611;gene_name=BCORP1;ID=intron:HG002_chrY_T0001611:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473319	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001611;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001611;transcript_name=HG002_chrY_T0001611;gene_name=BCORP1;ID=exon:HG002_chrY_T0001611:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473592	1000	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001612;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001612;gene_name=BCORP1;ID=HG002_chrY_T0001612;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001612;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001612;transcript_name=HG002_chrY_T0001612;gene_name=BCORP1;ID=exon:HG002_chrY_T0001612:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20464335	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001612;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001612;transcript_name=HG002_chrY_T0001612;gene_name=BCORP1;ID=intron:HG002_chrY_T0001612:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464336	20464452	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001612;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001612;transcript_name=HG002_chrY_T0001612;gene_name=BCORP1;ID=exon:HG002_chrY_T0001612:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20464925	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001612;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001612;transcript_name=HG002_chrY_T0001612;gene_name=BCORP1;ID=intron:HG002_chrY_T0001612:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464926	20465006	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001612;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001612;transcript_name=HG002_chrY_T0001612;gene_name=BCORP1;ID=exon:HG002_chrY_T0001612:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20465007	20473293	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001612;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001612;transcript_name=HG002_chrY_T0001612;gene_name=BCORP1;ID=intron:HG002_chrY_T0001612:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473592	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001612;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001612;transcript_name=HG002_chrY_T0001612;gene_name=BCORP1;ID=exon:HG002_chrY_T0001612:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473321	1000	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001613;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001613;gene_name=BCORP1;ID=HG002_chrY_T0001613;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001613;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001613;transcript_name=HG002_chrY_T0001613;gene_name=BCORP1;ID=exon:HG002_chrY_T0001613:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20463541	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001613;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001613;transcript_name=HG002_chrY_T0001613;gene_name=BCORP1;ID=intron:HG002_chrY_T0001613:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20463542	20463601	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001613;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001613;transcript_name=HG002_chrY_T0001613;gene_name=BCORP1;ID=exon:HG002_chrY_T0001613:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463602	20464351	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001613;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001613;transcript_name=HG002_chrY_T0001613;gene_name=BCORP1;ID=intron:HG002_chrY_T0001613:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001613;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001613;transcript_name=HG002_chrY_T0001613;gene_name=BCORP1;ID=exon:HG002_chrY_T0001613:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20464925	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001613;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001613;transcript_name=HG002_chrY_T0001613;gene_name=BCORP1;ID=intron:HG002_chrY_T0001613:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464926	20465006	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001613;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001613;transcript_name=HG002_chrY_T0001613;gene_name=BCORP1;ID=exon:HG002_chrY_T0001613:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20465007	20465651	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001613;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001613;transcript_name=HG002_chrY_T0001613;gene_name=BCORP1;ID=intron:HG002_chrY_T0001613:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20465652	20465731	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001613;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001613;transcript_name=HG002_chrY_T0001613;gene_name=BCORP1;ID=exon:HG002_chrY_T0001613:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20465732	20473293	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001613;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001613;transcript_name=HG002_chrY_T0001613;gene_name=BCORP1;ID=intron:HG002_chrY_T0001613:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473321	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001613;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001613;transcript_name=HG002_chrY_T0001613;gene_name=BCORP1;ID=exon:HG002_chrY_T0001613:5;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473327	1000	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001614;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001614;gene_name=BCORP1;ID=HG002_chrY_T0001614;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001614;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001614;transcript_name=HG002_chrY_T0001614;gene_name=BCORP1;ID=exon:HG002_chrY_T0001614:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20464351	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001614;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001614;transcript_name=HG002_chrY_T0001614;gene_name=BCORP1;ID=intron:HG002_chrY_T0001614:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001614;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001614;transcript_name=HG002_chrY_T0001614;gene_name=BCORP1;ID=exon:HG002_chrY_T0001614:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20465651	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001614;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001614;transcript_name=HG002_chrY_T0001614;gene_name=BCORP1;ID=intron:HG002_chrY_T0001614:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20465652	20465731	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001614;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001614;transcript_name=HG002_chrY_T0001614;gene_name=BCORP1;ID=exon:HG002_chrY_T0001614:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20465732	20473288	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001614;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001614;transcript_name=HG002_chrY_T0001614;gene_name=BCORP1;ID=intron:HG002_chrY_T0001614:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473289	20473327	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001614;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001614;transcript_name=HG002_chrY_T0001614;gene_name=BCORP1;ID=exon:HG002_chrY_T0001614:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473351	1000	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001615;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001615;gene_name=BCORP1;ID=HG002_chrY_T0001615;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001615;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001615;transcript_name=HG002_chrY_T0001615;gene_name=BCORP1;ID=exon:HG002_chrY_T0001615:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20462161	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001615;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001615;transcript_name=HG002_chrY_T0001615;gene_name=BCORP1;ID=intron:HG002_chrY_T0001615:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20462162	20462276	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001615;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001615;transcript_name=HG002_chrY_T0001615;gene_name=BCORP1;ID=exon:HG002_chrY_T0001615:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20462277	20462367	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001615;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001615;transcript_name=HG002_chrY_T0001615;gene_name=BCORP1;ID=intron:HG002_chrY_T0001615:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20462368	20462501	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001615;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001615;transcript_name=HG002_chrY_T0001615;gene_name=BCORP1;ID=exon:HG002_chrY_T0001615:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20462502	20463541	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001615;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001615;transcript_name=HG002_chrY_T0001615;gene_name=BCORP1;ID=intron:HG002_chrY_T0001615:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20463542	20463601	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001615;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001615;transcript_name=HG002_chrY_T0001615;gene_name=BCORP1;ID=exon:HG002_chrY_T0001615:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463602	20464335	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001615;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001615;transcript_name=HG002_chrY_T0001615;gene_name=BCORP1;ID=intron:HG002_chrY_T0001615:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464336	20464452	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001615;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001615;transcript_name=HG002_chrY_T0001615;gene_name=BCORP1;ID=exon:HG002_chrY_T0001615:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20473293	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001615;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001615;transcript_name=HG002_chrY_T0001615;gene_name=BCORP1;ID=intron:HG002_chrY_T0001615:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473351	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001615;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001615;transcript_name=HG002_chrY_T0001615;gene_name=BCORP1;ID=exon:HG002_chrY_T0001615:5;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473540	1000	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001616;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001616;gene_name=BCORP1;ID=HG002_chrY_T0001616;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001616;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001616;transcript_name=HG002_chrY_T0001616;gene_name=BCORP1;ID=exon:HG002_chrY_T0001616:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20462161	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001616;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001616;transcript_name=HG002_chrY_T0001616;gene_name=BCORP1;ID=intron:HG002_chrY_T0001616:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20462162	20462276	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001616;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001616;transcript_name=HG002_chrY_T0001616;gene_name=BCORP1;ID=exon:HG002_chrY_T0001616:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20462277	20462367	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001616;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001616;transcript_name=HG002_chrY_T0001616;gene_name=BCORP1;ID=intron:HG002_chrY_T0001616:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20462368	20462501	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001616;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001616;transcript_name=HG002_chrY_T0001616;gene_name=BCORP1;ID=exon:HG002_chrY_T0001616:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20462502	20463541	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001616;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001616;transcript_name=HG002_chrY_T0001616;gene_name=BCORP1;ID=intron:HG002_chrY_T0001616:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20463542	20463601	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001616;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001616;transcript_name=HG002_chrY_T0001616;gene_name=BCORP1;ID=exon:HG002_chrY_T0001616:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463602	20464351	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001616;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001616;transcript_name=HG002_chrY_T0001616;gene_name=BCORP1;ID=intron:HG002_chrY_T0001616:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001616;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001616;transcript_name=HG002_chrY_T0001616;gene_name=BCORP1;ID=exon:HG002_chrY_T0001616:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20473293	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001616;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001616;transcript_name=HG002_chrY_T0001616;gene_name=BCORP1;ID=intron:HG002_chrY_T0001616:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473540	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001616;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001616;transcript_name=HG002_chrY_T0001616;gene_name=BCORP1;ID=exon:HG002_chrY_T0001616:5;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473323	1000	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001617;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001617;gene_name=BCORP1;ID=HG002_chrY_T0001617;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001617;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001617;transcript_name=HG002_chrY_T0001617;gene_name=BCORP1;ID=exon:HG002_chrY_T0001617:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20462161	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001617;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001617;transcript_name=HG002_chrY_T0001617;gene_name=BCORP1;ID=intron:HG002_chrY_T0001617:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20462162	20462276	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001617;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001617;transcript_name=HG002_chrY_T0001617;gene_name=BCORP1;ID=exon:HG002_chrY_T0001617:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20462277	20463541	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001617;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001617;transcript_name=HG002_chrY_T0001617;gene_name=BCORP1;ID=intron:HG002_chrY_T0001617:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20463542	20463601	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001617;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001617;transcript_name=HG002_chrY_T0001617;gene_name=BCORP1;ID=exon:HG002_chrY_T0001617:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463602	20464351	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001617;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001617;transcript_name=HG002_chrY_T0001617;gene_name=BCORP1;ID=intron:HG002_chrY_T0001617:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001617;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001617;transcript_name=HG002_chrY_T0001617;gene_name=BCORP1;ID=exon:HG002_chrY_T0001617:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20465651	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001617;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001617;transcript_name=HG002_chrY_T0001617;gene_name=BCORP1;ID=intron:HG002_chrY_T0001617:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20465652	20465731	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001617;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001617;transcript_name=HG002_chrY_T0001617;gene_name=BCORP1;ID=exon:HG002_chrY_T0001617:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20465732	20473293	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001617;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001617;transcript_name=HG002_chrY_T0001617;gene_name=BCORP1;ID=intron:HG002_chrY_T0001617:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473323	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001617;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001617;transcript_name=HG002_chrY_T0001617;gene_name=BCORP1;ID=exon:HG002_chrY_T0001617:5;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473321	1000	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001618;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001618;gene_name=BCORP1;ID=HG002_chrY_T0001618;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001618;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001618;transcript_name=HG002_chrY_T0001618;gene_name=BCORP1;ID=exon:HG002_chrY_T0001618:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20462161	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001618;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001618;transcript_name=HG002_chrY_T0001618;gene_name=BCORP1;ID=intron:HG002_chrY_T0001618:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20462162	20462276	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001618;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001618;transcript_name=HG002_chrY_T0001618;gene_name=BCORP1;ID=exon:HG002_chrY_T0001618:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20462277	20462367	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001618;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001618;transcript_name=HG002_chrY_T0001618;gene_name=BCORP1;ID=intron:HG002_chrY_T0001618:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20462368	20462421	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001618;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001618;transcript_name=HG002_chrY_T0001618;gene_name=BCORP1;ID=exon:HG002_chrY_T0001618:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20462422	20464351	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001618;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001618;transcript_name=HG002_chrY_T0001618;gene_name=BCORP1;ID=intron:HG002_chrY_T0001618:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001618;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001618;transcript_name=HG002_chrY_T0001618;gene_name=BCORP1;ID=exon:HG002_chrY_T0001618:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20465651	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001618;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001618;transcript_name=HG002_chrY_T0001618;gene_name=BCORP1;ID=intron:HG002_chrY_T0001618:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20465652	20465731	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001618;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001618;transcript_name=HG002_chrY_T0001618;gene_name=BCORP1;ID=exon:HG002_chrY_T0001618:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20465732	20473293	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001618;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001618;transcript_name=HG002_chrY_T0001618;gene_name=BCORP1;ID=intron:HG002_chrY_T0001618:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473321	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001618;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001618;transcript_name=HG002_chrY_T0001618;gene_name=BCORP1;ID=exon:HG002_chrY_T0001618:5;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473399	1000	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001619;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001619;gene_name=BCORP1;ID=HG002_chrY_T0001619;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001619;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001619;transcript_name=HG002_chrY_T0001619;gene_name=BCORP1;ID=exon:HG002_chrY_T0001619:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20463541	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001619;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001619;transcript_name=HG002_chrY_T0001619;gene_name=BCORP1;ID=intron:HG002_chrY_T0001619:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20463542	20463601	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001619;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001619;transcript_name=HG002_chrY_T0001619;gene_name=BCORP1;ID=exon:HG002_chrY_T0001619:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463602	20464351	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001619;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001619;transcript_name=HG002_chrY_T0001619;gene_name=BCORP1;ID=intron:HG002_chrY_T0001619:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001619;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001619;transcript_name=HG002_chrY_T0001619;gene_name=BCORP1;ID=exon:HG002_chrY_T0001619:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20473288	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001619;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001619;transcript_name=HG002_chrY_T0001619;gene_name=BCORP1;ID=intron:HG002_chrY_T0001619:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473289	20473399	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001619;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001619;transcript_name=HG002_chrY_T0001619;gene_name=BCORP1;ID=exon:HG002_chrY_T0001619:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473356	1000	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001620;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001620;gene_name=BCORP1;ID=HG002_chrY_T0001620;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001620;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001620;transcript_name=HG002_chrY_T0001620;gene_name=BCORP1;ID=exon:HG002_chrY_T0001620:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20463541	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001620;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001620;transcript_name=HG002_chrY_T0001620;gene_name=BCORP1;ID=intron:HG002_chrY_T0001620:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20463542	20463601	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001620;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001620;transcript_name=HG002_chrY_T0001620;gene_name=BCORP1;ID=exon:HG002_chrY_T0001620:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463602	20464335	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001620;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001620;transcript_name=HG002_chrY_T0001620;gene_name=BCORP1;ID=intron:HG002_chrY_T0001620:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464336	20464452	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001620;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001620;transcript_name=HG002_chrY_T0001620;gene_name=BCORP1;ID=exon:HG002_chrY_T0001620:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20473288	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001620;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001620;transcript_name=HG002_chrY_T0001620;gene_name=BCORP1;ID=intron:HG002_chrY_T0001620:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473289	20473356	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001620;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001620;transcript_name=HG002_chrY_T0001620;gene_name=BCORP1;ID=exon:HG002_chrY_T0001620:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473360	1000	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001621;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001621;gene_name=BCORP1;ID=HG002_chrY_T0001621;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20463124	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001621;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001621;transcript_name=HG002_chrY_T0001621;gene_name=BCORP1;ID=exon:HG002_chrY_T0001621:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463125	20463541	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001621;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001621;transcript_name=HG002_chrY_T0001621;gene_name=BCORP1;ID=intron:HG002_chrY_T0001621:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20463542	20463601	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001621;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001621;transcript_name=HG002_chrY_T0001621;gene_name=BCORP1;ID=exon:HG002_chrY_T0001621:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463602	20464335	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001621;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001621;transcript_name=HG002_chrY_T0001621;gene_name=BCORP1;ID=intron:HG002_chrY_T0001621:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464336	20464452	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001621;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001621;transcript_name=HG002_chrY_T0001621;gene_name=BCORP1;ID=exon:HG002_chrY_T0001621:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20473293	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001621;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001621;transcript_name=HG002_chrY_T0001621;gene_name=BCORP1;ID=intron:HG002_chrY_T0001621:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473360	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001621;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001621;transcript_name=HG002_chrY_T0001621;gene_name=BCORP1;ID=exon:HG002_chrY_T0001621:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473319	1000	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001622;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001622;gene_name=BCORP1;ID=HG002_chrY_T0001622;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001622;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001622;transcript_name=HG002_chrY_T0001622;gene_name=BCORP1;ID=exon:HG002_chrY_T0001622:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20462161	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001622;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001622;transcript_name=HG002_chrY_T0001622;gene_name=BCORP1;ID=intron:HG002_chrY_T0001622:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20462162	20462276	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001622;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001622;transcript_name=HG002_chrY_T0001622;gene_name=BCORP1;ID=exon:HG002_chrY_T0001622:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20462277	20464351	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001622;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001622;transcript_name=HG002_chrY_T0001622;gene_name=BCORP1;ID=intron:HG002_chrY_T0001622:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001622;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001622;transcript_name=HG002_chrY_T0001622;gene_name=BCORP1;ID=exon:HG002_chrY_T0001622:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20473288	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001622;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001622;transcript_name=HG002_chrY_T0001622;gene_name=BCORP1;ID=intron:HG002_chrY_T0001622:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473289	20473319	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001622;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001622;transcript_name=HG002_chrY_T0001622;gene_name=BCORP1;ID=exon:HG002_chrY_T0001622:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473341	1000	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001623;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001623;gene_name=BCORP1;ID=HG002_chrY_T0001623;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001623;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001623;transcript_name=HG002_chrY_T0001623;gene_name=BCORP1;ID=exon:HG002_chrY_T0001623:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20462161	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001623;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001623;transcript_name=HG002_chrY_T0001623;gene_name=BCORP1;ID=intron:HG002_chrY_T0001623:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20462162	20462280	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001623;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001623;transcript_name=HG002_chrY_T0001623;gene_name=BCORP1;ID=exon:HG002_chrY_T0001623:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20462281	20464335	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001623;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001623;transcript_name=HG002_chrY_T0001623;gene_name=BCORP1;ID=intron:HG002_chrY_T0001623:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464336	20464452	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001623;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001623;transcript_name=HG002_chrY_T0001623;gene_name=BCORP1;ID=exon:HG002_chrY_T0001623:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20473293	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001623;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001623;transcript_name=HG002_chrY_T0001623;gene_name=BCORP1;ID=intron:HG002_chrY_T0001623:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473341	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001623;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001623;transcript_name=HG002_chrY_T0001623;gene_name=BCORP1;ID=exon:HG002_chrY_T0001623:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473371	1000	-	.	source_transcript=ENST00000761013.1;source_transcript_name=BCORP1-229;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761013.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001624;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001624;gene_name=BCORP1;ID=HG002_chrY_T0001624;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761013.1;source_transcript_name=BCORP1-229;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761013.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001624;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001624;transcript_name=HG002_chrY_T0001624;gene_name=BCORP1;ID=exon:HG002_chrY_T0001624:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20464351	.	-	.	source_transcript=ENST00000761013.1;source_transcript_name=BCORP1-229;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761013.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001624;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001624;transcript_name=HG002_chrY_T0001624;gene_name=BCORP1;ID=intron:HG002_chrY_T0001624:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000761013.1;source_transcript_name=BCORP1-229;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761013.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001624;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001624;transcript_name=HG002_chrY_T0001624;gene_name=BCORP1;ID=exon:HG002_chrY_T0001624:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20473288	.	-	.	source_transcript=ENST00000761013.1;source_transcript_name=BCORP1-229;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761013.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001624;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001624;transcript_name=HG002_chrY_T0001624;gene_name=BCORP1;ID=intron:HG002_chrY_T0001624:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473289	20473371	.	-	.	source_transcript=ENST00000761013.1;source_transcript_name=BCORP1-229;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761013.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001624;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001624;transcript_name=HG002_chrY_T0001624;gene_name=BCORP1;ID=exon:HG002_chrY_T0001624:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473351	1000	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001625;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001625;gene_name=BCORP1;ID=HG002_chrY_T0001625;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20462501	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001625;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001625;transcript_name=HG002_chrY_T0001625;gene_name=BCORP1;ID=exon:HG002_chrY_T0001625:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20462502	20463541	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001625;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001625;transcript_name=HG002_chrY_T0001625;gene_name=BCORP1;ID=intron:HG002_chrY_T0001625:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20463542	20463601	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001625;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001625;transcript_name=HG002_chrY_T0001625;gene_name=BCORP1;ID=exon:HG002_chrY_T0001625:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463602	20464351	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001625;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001625;transcript_name=HG002_chrY_T0001625;gene_name=BCORP1;ID=intron:HG002_chrY_T0001625:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001625;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001625;transcript_name=HG002_chrY_T0001625;gene_name=BCORP1;ID=exon:HG002_chrY_T0001625:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20473293	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001625;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001625;transcript_name=HG002_chrY_T0001625;gene_name=BCORP1;ID=intron:HG002_chrY_T0001625:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473351	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001625;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001625;transcript_name=HG002_chrY_T0001625;gene_name=BCORP1;ID=exon:HG002_chrY_T0001625:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461702	20473356	1000	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001626;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001626;gene_name=BCORP1;ID=HG002_chrY_T0001626;Name=BCORP1
HG002_chrY	CAT	exon	20461702	20461866	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001626;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001626;transcript_name=HG002_chrY_T0001626;gene_name=BCORP1;ID=exon:HG002_chrY_T0001626:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20464351	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001626;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001626;transcript_name=HG002_chrY_T0001626;gene_name=BCORP1;ID=intron:HG002_chrY_T0001626:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001626;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001626;transcript_name=HG002_chrY_T0001626;gene_name=BCORP1;ID=exon:HG002_chrY_T0001626:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20465651	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001626;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001626;transcript_name=HG002_chrY_T0001626;gene_name=BCORP1;ID=intron:HG002_chrY_T0001626:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20465652	20465736	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001626;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001626;transcript_name=HG002_chrY_T0001626;gene_name=BCORP1;ID=exon:HG002_chrY_T0001626:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20465737	20473293	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001626;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001626;transcript_name=HG002_chrY_T0001626;gene_name=BCORP1;ID=intron:HG002_chrY_T0001626:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473356	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001626;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001626;transcript_name=HG002_chrY_T0001626;gene_name=BCORP1;ID=exon:HG002_chrY_T0001626:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461705	20473356	1000	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001627;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001627;gene_name=BCORP1;ID=HG002_chrY_T0001627;Name=BCORP1
HG002_chrY	CAT	exon	20461705	20461866	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001627;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001627;transcript_name=HG002_chrY_T0001627;gene_name=BCORP1;ID=exon:HG002_chrY_T0001627:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20462322	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001627;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001627;transcript_name=HG002_chrY_T0001627;gene_name=BCORP1;ID=intron:HG002_chrY_T0001627:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20462323	20462421	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001627;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001627;transcript_name=HG002_chrY_T0001627;gene_name=BCORP1;ID=exon:HG002_chrY_T0001627:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20462422	20464335	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001627;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001627;transcript_name=HG002_chrY_T0001627;gene_name=BCORP1;ID=intron:HG002_chrY_T0001627:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464336	20464452	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001627;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001627;transcript_name=HG002_chrY_T0001627;gene_name=BCORP1;ID=exon:HG002_chrY_T0001627:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20473293	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001627;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001627;transcript_name=HG002_chrY_T0001627;gene_name=BCORP1;ID=intron:HG002_chrY_T0001627:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473356	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001627;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001627;transcript_name=HG002_chrY_T0001627;gene_name=BCORP1;ID=exon:HG002_chrY_T0001627:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461710	20473319	1000	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001628;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001628;gene_name=BCORP1;ID=HG002_chrY_T0001628;Name=BCORP1
HG002_chrY	CAT	exon	20461710	20461866	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001628;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001628;transcript_name=HG002_chrY_T0001628;gene_name=BCORP1;ID=exon:HG002_chrY_T0001628:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20462161	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001628;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001628;transcript_name=HG002_chrY_T0001628;gene_name=BCORP1;ID=intron:HG002_chrY_T0001628:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20462162	20462276	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001628;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001628;transcript_name=HG002_chrY_T0001628;gene_name=BCORP1;ID=exon:HG002_chrY_T0001628:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20462277	20464335	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001628;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001628;transcript_name=HG002_chrY_T0001628;gene_name=BCORP1;ID=intron:HG002_chrY_T0001628:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464336	20464452	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001628;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001628;transcript_name=HG002_chrY_T0001628;gene_name=BCORP1;ID=exon:HG002_chrY_T0001628:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20465651	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001628;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001628;transcript_name=HG002_chrY_T0001628;gene_name=BCORP1;ID=intron:HG002_chrY_T0001628:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20465652	20465731	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001628;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001628;transcript_name=HG002_chrY_T0001628;gene_name=BCORP1;ID=exon:HG002_chrY_T0001628:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20465732	20473293	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001628;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001628;transcript_name=HG002_chrY_T0001628;gene_name=BCORP1;ID=intron:HG002_chrY_T0001628:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473319	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001628;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001628;transcript_name=HG002_chrY_T0001628;gene_name=BCORP1;ID=exon:HG002_chrY_T0001628:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461710	20473548	1000	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001629;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001629;gene_name=BCORP1;ID=HG002_chrY_T0001629;Name=BCORP1
HG002_chrY	CAT	exon	20461710	20461866	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001629;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001629;transcript_name=HG002_chrY_T0001629;gene_name=BCORP1;ID=exon:HG002_chrY_T0001629:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20462161	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001629;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001629;transcript_name=HG002_chrY_T0001629;gene_name=BCORP1;ID=intron:HG002_chrY_T0001629:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20462162	20462276	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001629;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001629;transcript_name=HG002_chrY_T0001629;gene_name=BCORP1;ID=exon:HG002_chrY_T0001629:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20462277	20464351	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001629;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001629;transcript_name=HG002_chrY_T0001629;gene_name=BCORP1;ID=intron:HG002_chrY_T0001629:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001629;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001629;transcript_name=HG002_chrY_T0001629;gene_name=BCORP1;ID=exon:HG002_chrY_T0001629:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20464925	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001629;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001629;transcript_name=HG002_chrY_T0001629;gene_name=BCORP1;ID=intron:HG002_chrY_T0001629:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464926	20464981	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001629;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001629;transcript_name=HG002_chrY_T0001629;gene_name=BCORP1;ID=exon:HG002_chrY_T0001629:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464982	20465651	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001629;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001629;transcript_name=HG002_chrY_T0001629;gene_name=BCORP1;ID=intron:HG002_chrY_T0001629:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20465652	20465736	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001629;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001629;transcript_name=HG002_chrY_T0001629;gene_name=BCORP1;ID=exon:HG002_chrY_T0001629:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20465737	20473293	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001629;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001629;transcript_name=HG002_chrY_T0001629;gene_name=BCORP1;ID=intron:HG002_chrY_T0001629:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473548	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001629;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001629;transcript_name=HG002_chrY_T0001629;gene_name=BCORP1;ID=exon:HG002_chrY_T0001629:5;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461710	20473347	1000	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001630;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001630;gene_name=BCORP1;ID=HG002_chrY_T0001630;Name=BCORP1
HG002_chrY	CAT	exon	20461710	20461866	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001630;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001630;transcript_name=HG002_chrY_T0001630;gene_name=BCORP1;ID=exon:HG002_chrY_T0001630:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20462161	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001630;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001630;transcript_name=HG002_chrY_T0001630;gene_name=BCORP1;ID=intron:HG002_chrY_T0001630:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20462162	20462276	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001630;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001630;transcript_name=HG002_chrY_T0001630;gene_name=BCORP1;ID=exon:HG002_chrY_T0001630:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20462277	20463541	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001630;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001630;transcript_name=HG002_chrY_T0001630;gene_name=BCORP1;ID=intron:HG002_chrY_T0001630:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20463542	20463601	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001630;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001630;transcript_name=HG002_chrY_T0001630;gene_name=BCORP1;ID=exon:HG002_chrY_T0001630:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463602	20464351	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001630;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001630;transcript_name=HG002_chrY_T0001630;gene_name=BCORP1;ID=intron:HG002_chrY_T0001630:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001630;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001630;transcript_name=HG002_chrY_T0001630;gene_name=BCORP1;ID=exon:HG002_chrY_T0001630:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20473293	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001630;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001630;transcript_name=HG002_chrY_T0001630;gene_name=BCORP1;ID=intron:HG002_chrY_T0001630:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473347	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001630;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001630;transcript_name=HG002_chrY_T0001630;gene_name=BCORP1;ID=exon:HG002_chrY_T0001630:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461711	20473321	1000	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001631;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001631;gene_name=BCORP1;ID=HG002_chrY_T0001631;Name=BCORP1
HG002_chrY	CAT	exon	20461711	20461866	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001631;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001631;transcript_name=HG002_chrY_T0001631;gene_name=BCORP1;ID=exon:HG002_chrY_T0001631:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20462161	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001631;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001631;transcript_name=HG002_chrY_T0001631;gene_name=BCORP1;ID=intron:HG002_chrY_T0001631:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20462162	20462276	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001631;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001631;transcript_name=HG002_chrY_T0001631;gene_name=BCORP1;ID=exon:HG002_chrY_T0001631:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20462277	20464351	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001631;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001631;transcript_name=HG002_chrY_T0001631;gene_name=BCORP1;ID=intron:HG002_chrY_T0001631:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001631;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001631;transcript_name=HG002_chrY_T0001631;gene_name=BCORP1;ID=exon:HG002_chrY_T0001631:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20464925	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001631;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001631;transcript_name=HG002_chrY_T0001631;gene_name=BCORP1;ID=intron:HG002_chrY_T0001631:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464926	20465006	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001631;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001631;transcript_name=HG002_chrY_T0001631;gene_name=BCORP1;ID=exon:HG002_chrY_T0001631:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20465007	20465651	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001631;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001631;transcript_name=HG002_chrY_T0001631;gene_name=BCORP1;ID=intron:HG002_chrY_T0001631:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20465652	20465731	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001631;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001631;transcript_name=HG002_chrY_T0001631;gene_name=BCORP1;ID=exon:HG002_chrY_T0001631:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20465732	20473293	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001631;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001631;transcript_name=HG002_chrY_T0001631;gene_name=BCORP1;ID=intron:HG002_chrY_T0001631:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473321	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001631;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001631;transcript_name=HG002_chrY_T0001631;gene_name=BCORP1;ID=exon:HG002_chrY_T0001631:5;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20461713	20465731	1000	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001632;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001632;gene_name=BCORP1;ID=HG002_chrY_T0001632;Name=BCORP1
HG002_chrY	CAT	exon	20461713	20461866	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001632;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001632;transcript_name=HG002_chrY_T0001632;gene_name=BCORP1;ID=exon:HG002_chrY_T0001632:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20461867	20462161	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001632;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001632;transcript_name=HG002_chrY_T0001632;gene_name=BCORP1;ID=intron:HG002_chrY_T0001632:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20462162	20462276	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001632;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001632;transcript_name=HG002_chrY_T0001632;gene_name=BCORP1;ID=exon:HG002_chrY_T0001632:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20462277	20462367	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001632;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001632;transcript_name=HG002_chrY_T0001632;gene_name=BCORP1;ID=intron:HG002_chrY_T0001632:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20462368	20462501	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001632;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001632;transcript_name=HG002_chrY_T0001632;gene_name=BCORP1;ID=exon:HG002_chrY_T0001632:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20462502	20463541	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001632;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001632;transcript_name=HG002_chrY_T0001632;gene_name=BCORP1;ID=intron:HG002_chrY_T0001632:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20463542	20463601	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001632;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001632;transcript_name=HG002_chrY_T0001632;gene_name=BCORP1;ID=exon:HG002_chrY_T0001632:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463602	20464335	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001632;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001632;transcript_name=HG002_chrY_T0001632;gene_name=BCORP1;ID=intron:HG002_chrY_T0001632:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464336	20464452	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001632;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001632;transcript_name=HG002_chrY_T0001632;gene_name=BCORP1;ID=exon:HG002_chrY_T0001632:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20465651	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001632;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001632;transcript_name=HG002_chrY_T0001632;gene_name=BCORP1;ID=intron:HG002_chrY_T0001632:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20465652	20465731	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001632;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001632;transcript_name=HG002_chrY_T0001632;gene_name=BCORP1;ID=exon:HG002_chrY_T0001632:5;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20462662	20473321	1000	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001633;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001633;gene_name=BCORP1;ID=HG002_chrY_T0001633;Name=BCORP1
HG002_chrY	CAT	exon	20462662	20463124	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001633;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001633;transcript_name=HG002_chrY_T0001633;gene_name=BCORP1;ID=exon:HG002_chrY_T0001633:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463125	20463541	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001633;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001633;transcript_name=HG002_chrY_T0001633;gene_name=BCORP1;ID=intron:HG002_chrY_T0001633:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20463542	20463601	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001633;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001633;transcript_name=HG002_chrY_T0001633;gene_name=BCORP1;ID=exon:HG002_chrY_T0001633:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463602	20464351	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001633;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001633;transcript_name=HG002_chrY_T0001633;gene_name=BCORP1;ID=intron:HG002_chrY_T0001633:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001633;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001633;transcript_name=HG002_chrY_T0001633;gene_name=BCORP1;ID=exon:HG002_chrY_T0001633:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20465651	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001633;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001633;transcript_name=HG002_chrY_T0001633;gene_name=BCORP1;ID=intron:HG002_chrY_T0001633:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20465652	20465731	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001633;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001633;transcript_name=HG002_chrY_T0001633;gene_name=BCORP1;ID=exon:HG002_chrY_T0001633:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20465732	20473293	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001633;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001633;transcript_name=HG002_chrY_T0001633;gene_name=BCORP1;ID=intron:HG002_chrY_T0001633:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473294	20473321	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001633;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001633;transcript_name=HG002_chrY_T0001633;gene_name=BCORP1;ID=exon:HG002_chrY_T0001633:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20462830	20464981	1000	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001634;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001634;gene_name=BCORP1;ID=HG002_chrY_T0001634;Name=BCORP1
HG002_chrY	CAT	exon	20462830	20463124	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001634;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001634;transcript_name=HG002_chrY_T0001634;gene_name=BCORP1;ID=exon:HG002_chrY_T0001634:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463125	20463541	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001634;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001634;transcript_name=HG002_chrY_T0001634;gene_name=BCORP1;ID=intron:HG002_chrY_T0001634:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20463542	20463601	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001634;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001634;transcript_name=HG002_chrY_T0001634;gene_name=BCORP1;ID=exon:HG002_chrY_T0001634:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463602	20464351	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001634;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001634;transcript_name=HG002_chrY_T0001634;gene_name=BCORP1;ID=intron:HG002_chrY_T0001634:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464352	20464452	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001634;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001634;transcript_name=HG002_chrY_T0001634;gene_name=BCORP1;ID=exon:HG002_chrY_T0001634:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20464925	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001634;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001634;transcript_name=HG002_chrY_T0001634;gene_name=BCORP1;ID=intron:HG002_chrY_T0001634:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464926	20464981	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001634;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001634;transcript_name=HG002_chrY_T0001634;gene_name=BCORP1;ID=exon:HG002_chrY_T0001634:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20462973	20473321	1000	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001635;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_G0000536;transcript_name=HG002_chrY_T0001635;gene_name=BCORP1;ID=HG002_chrY_T0001635;Name=BCORP1
HG002_chrY	CAT	exon	20462973	20463124	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001635;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001635;transcript_name=HG002_chrY_T0001635;gene_name=BCORP1;ID=exon:HG002_chrY_T0001635:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463125	20463541	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001635;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001635;transcript_name=HG002_chrY_T0001635;gene_name=BCORP1;ID=intron:HG002_chrY_T0001635:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20463542	20463601	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001635;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001635;transcript_name=HG002_chrY_T0001635;gene_name=BCORP1;ID=exon:HG002_chrY_T0001635:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20463602	20464335	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001635;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001635;transcript_name=HG002_chrY_T0001635;gene_name=BCORP1;ID=intron:HG002_chrY_T0001635:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20464336	20464452	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001635;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001635;transcript_name=HG002_chrY_T0001635;gene_name=BCORP1;ID=exon:HG002_chrY_T0001635:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20464453	20465651	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001635;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001635;transcript_name=HG002_chrY_T0001635;gene_name=BCORP1;ID=intron:HG002_chrY_T0001635:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20465652	20465731	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001635;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001635;transcript_name=HG002_chrY_T0001635;gene_name=BCORP1;ID=exon:HG002_chrY_T0001635:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20465732	20473288	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001635;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001635;transcript_name=HG002_chrY_T0001635;gene_name=BCORP1;ID=intron:HG002_chrY_T0001635:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20473289	20473321	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001635;gene_id=HG002_chrY_G0000536;Parent=HG002_chrY_T0001635;transcript_name=HG002_chrY_T0001635;gene_name=BCORP1;ID=exon:HG002_chrY_T0001635:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	20362920	20391201	.	-	.	source_gene_common_name=BCORP1;source_gene=ENSG00000215580.13;gene_id=HG002_chrY_G0000537;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=BCORP1;gene_sources=liftoff;ID=HG002_chrY_G0000537;Name=BCORP1
HG002_chrY	CAT	transcript	20362920	20391201	1000	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001573;gene_id=HG002_chrY_G0000537;Parent=HG002_chrY_G0000537;transcript_name=HG002_chrY_T0001573;gene_name=BCORP1;ID=HG002_chrY_T0001573;Name=BCORP1
HG002_chrY	CAT	exon	20362920	20363199	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001573;gene_id=HG002_chrY_G0000537;Parent=HG002_chrY_T0001573;transcript_name=HG002_chrY_T0001573;gene_name=BCORP1;ID=exon:HG002_chrY_T0001573:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20363200	20365243	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001573;gene_id=HG002_chrY_G0000537;Parent=HG002_chrY_T0001573;transcript_name=HG002_chrY_T0001573;gene_name=BCORP1;ID=intron:HG002_chrY_T0001573:0;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20365244	20365399	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001573;gene_id=HG002_chrY_G0000537;Parent=HG002_chrY_T0001573;transcript_name=HG002_chrY_T0001573;gene_name=BCORP1;ID=exon:HG002_chrY_T0001573:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20365400	20365608	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001573;gene_id=HG002_chrY_G0000537;Parent=HG002_chrY_T0001573;transcript_name=HG002_chrY_T0001573;gene_name=BCORP1;ID=intron:HG002_chrY_T0001573:1;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20365609	20365686	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001573;gene_id=HG002_chrY_G0000537;Parent=HG002_chrY_T0001573;transcript_name=HG002_chrY_T0001573;gene_name=BCORP1;ID=exon:HG002_chrY_T0001573:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20365687	20366278	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001573;gene_id=HG002_chrY_G0000537;Parent=HG002_chrY_T0001573;transcript_name=HG002_chrY_T0001573;gene_name=BCORP1;ID=intron:HG002_chrY_T0001573:2;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20366279	20366424	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001573;gene_id=HG002_chrY_G0000537;Parent=HG002_chrY_T0001573;transcript_name=HG002_chrY_T0001573;gene_name=BCORP1;ID=exon:HG002_chrY_T0001573:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20366425	20372772	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001573;gene_id=HG002_chrY_G0000537;Parent=HG002_chrY_T0001573;transcript_name=HG002_chrY_T0001573;gene_name=BCORP1;ID=intron:HG002_chrY_T0001573:3;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20372773	20373024	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001573;gene_id=HG002_chrY_G0000537;Parent=HG002_chrY_T0001573;transcript_name=HG002_chrY_T0001573;gene_name=BCORP1;ID=exon:HG002_chrY_T0001573:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20373025	20373380	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001573;gene_id=HG002_chrY_G0000537;Parent=HG002_chrY_T0001573;transcript_name=HG002_chrY_T0001573;gene_name=BCORP1;ID=intron:HG002_chrY_T0001573:4;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20373381	20373691	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001573;gene_id=HG002_chrY_G0000537;Parent=HG002_chrY_T0001573;transcript_name=HG002_chrY_T0001573;gene_name=BCORP1;ID=exon:HG002_chrY_T0001573:5;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20373692	20380221	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001573;gene_id=HG002_chrY_G0000537;Parent=HG002_chrY_T0001573;transcript_name=HG002_chrY_T0001573;gene_name=BCORP1;ID=intron:HG002_chrY_T0001573:5;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20380222	20380567	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001573;gene_id=HG002_chrY_G0000537;Parent=HG002_chrY_T0001573;transcript_name=HG002_chrY_T0001573;gene_name=BCORP1;ID=exon:HG002_chrY_T0001573:6;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20380568	20380956	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001573;gene_id=HG002_chrY_G0000537;Parent=HG002_chrY_T0001573;transcript_name=HG002_chrY_T0001573;gene_name=BCORP1;ID=intron:HG002_chrY_T0001573:6;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20380957	20381220	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001573;gene_id=HG002_chrY_G0000537;Parent=HG002_chrY_T0001573;transcript_name=HG002_chrY_T0001573;gene_name=BCORP1;ID=exon:HG002_chrY_T0001573:7;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20381221	20386481	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001573;gene_id=HG002_chrY_G0000537;Parent=HG002_chrY_T0001573;transcript_name=HG002_chrY_T0001573;gene_name=BCORP1;ID=intron:HG002_chrY_T0001573:7;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20386482	20386611	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001573;gene_id=HG002_chrY_G0000537;Parent=HG002_chrY_T0001573;transcript_name=HG002_chrY_T0001573;gene_name=BCORP1;ID=exon:HG002_chrY_T0001573:8;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20386612	20387007	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001573;gene_id=HG002_chrY_G0000537;Parent=HG002_chrY_T0001573;transcript_name=HG002_chrY_T0001573;gene_name=BCORP1;ID=intron:HG002_chrY_T0001573:8;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20387008	20387055	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001573;gene_id=HG002_chrY_G0000537;Parent=HG002_chrY_T0001573;transcript_name=HG002_chrY_T0001573;gene_name=BCORP1;ID=exon:HG002_chrY_T0001573:9;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20387056	20387983	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001573;gene_id=HG002_chrY_G0000537;Parent=HG002_chrY_T0001573;transcript_name=HG002_chrY_T0001573;gene_name=BCORP1;ID=intron:HG002_chrY_T0001573:9;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20387984	20391201	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG002_chrY_T0001573;gene_id=HG002_chrY_G0000537;Parent=HG002_chrY_T0001573;transcript_name=HG002_chrY_T0001573;gene_name=BCORP1;ID=exon:HG002_chrY_T0001573:10;Name=BCORP1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	20473625	20512588	.	+	.	source_gene_common_name=TXLNGY;source_gene=ENSG00000291033.2;gene_id=HG002_chrY_G0000538;gene_biotype=lncRNA;gene_name=TXLNGY;gene_sources=liftoff;ID=HG002_chrY_G0000538;Name=TXLNGY
HG002_chrY	CAT	transcript	20473625	20500477	1000	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001636;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001636;gene_name=TXLNGY;ID=HG002_chrY_T0001636;Name=TXLNGY
HG002_chrY	CAT	exon	20473625	20473882	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001636;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001636;transcript_name=HG002_chrY_T0001636;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001636:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473883	20493521	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001636;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001636;transcript_name=HG002_chrY_T0001636;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001636:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001636;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001636;transcript_name=HG002_chrY_T0001636;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001636:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20494681	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001636;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001636;transcript_name=HG002_chrY_T0001636;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001636:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20494682	20494723	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001636;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001636;transcript_name=HG002_chrY_T0001636;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001636:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20494724	20494854	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001636;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001636;transcript_name=HG002_chrY_T0001636;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001636:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20494855	20494962	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001636;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001636;transcript_name=HG002_chrY_T0001636;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001636:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20494963	20495832	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001636;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001636;transcript_name=HG002_chrY_T0001636;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001636:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20495833	20495924	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001636;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001636;transcript_name=HG002_chrY_T0001636;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001636:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20495925	20498091	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001636;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001636;transcript_name=HG002_chrY_T0001636;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001636:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20498092	20498271	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001636;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001636;transcript_name=HG002_chrY_T0001636;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001636:5;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20498272	20499710	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001636;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001636;transcript_name=HG002_chrY_T0001636;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001636:5;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20499711	20500477	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001636;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001636;transcript_name=HG002_chrY_T0001636;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001636:6;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473625	20496559	1000	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001637;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001637;gene_name=TXLNGY;ID=HG002_chrY_T0001637;Name=TXLNGY
HG002_chrY	CAT	exon	20473625	20473794	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001637;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001637;transcript_name=HG002_chrY_T0001637;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001637:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473795	20493521	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001637;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001637;transcript_name=HG002_chrY_T0001637;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001637:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001637;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001637;transcript_name=HG002_chrY_T0001637;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001637:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20494681	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001637;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001637;transcript_name=HG002_chrY_T0001637;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001637:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20494682	20494962	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001637;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001637;transcript_name=HG002_chrY_T0001637;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001637:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20494963	20495838	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001637;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001637;transcript_name=HG002_chrY_T0001637;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001637:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20495839	20495924	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001637;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001637;transcript_name=HG002_chrY_T0001637;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001637:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20495925	20496394	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001637;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001637;transcript_name=HG002_chrY_T0001637;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001637:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20496395	20496559	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001637;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001637;transcript_name=HG002_chrY_T0001637;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001637:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473638	20494471	1000	+	.	source_transcript=ENST00000789742.1;source_transcript_name=TXLNGY-243;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789742.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001638;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001638;gene_name=TXLNGY;ID=HG002_chrY_T0001638;Name=TXLNGY
HG002_chrY	CAT	exon	20473638	20473882	.	+	.	source_transcript=ENST00000789742.1;source_transcript_name=TXLNGY-243;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001638;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001638;transcript_name=HG002_chrY_T0001638;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001638:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473883	20493521	.	+	.	source_transcript=ENST00000789742.1;source_transcript_name=TXLNGY-243;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001638;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001638;transcript_name=HG002_chrY_T0001638;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001638:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20494471	.	+	.	source_transcript=ENST00000789742.1;source_transcript_name=TXLNGY-243;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001638;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001638;transcript_name=HG002_chrY_T0001638;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001638:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473640	20496159	1000	+	.	source_transcript=ENST00000447202.3;source_transcript_name=TXLNGY-204;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000447202.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000447202.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001639;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001639;gene_name=TXLNGY;ID=HG002_chrY_T0001639;Name=TXLNGY
HG002_chrY	CAT	exon	20473640	20474263	.	+	.	source_transcript=ENST00000447202.3;source_transcript_name=TXLNGY-204;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000447202.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000447202.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001639;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001639;transcript_name=HG002_chrY_T0001639;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001639:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20474264	20493521	.	+	.	source_transcript=ENST00000447202.3;source_transcript_name=TXLNGY-204;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000447202.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000447202.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001639;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001639;transcript_name=HG002_chrY_T0001639;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001639:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20496159	.	+	.	source_transcript=ENST00000447202.3;source_transcript_name=TXLNGY-204;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000447202.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000447202.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001639;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001639;transcript_name=HG002_chrY_T0001639;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001639:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473640	20474883	1000	+	.	source_transcript=ENST00000688167.3;source_transcript_name=TXLNGY-217;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000688167.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000688167.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001640;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001640;gene_name=TXLNGY;ID=HG002_chrY_T0001640;Name=TXLNGY
HG002_chrY	CAT	exon	20473640	20474883	.	+	.	source_transcript=ENST00000688167.3;source_transcript_name=TXLNGY-217;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000688167.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000688167.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001640;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001640;transcript_name=HG002_chrY_T0001640;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001640:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473641	20496735	1000	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001641;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001641;gene_name=TXLNGY;ID=HG002_chrY_T0001641;Name=TXLNGY
HG002_chrY	CAT	exon	20473641	20473882	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001641;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001641;transcript_name=HG002_chrY_T0001641;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001641:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473883	20493521	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001641;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001641;transcript_name=HG002_chrY_T0001641;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001641:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001641;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001641;transcript_name=HG002_chrY_T0001641;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001641:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20494681	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001641;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001641;transcript_name=HG002_chrY_T0001641;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001641:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20494682	20495924	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001641;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001641;transcript_name=HG002_chrY_T0001641;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001641:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20495925	20496394	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001641;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001641;transcript_name=HG002_chrY_T0001641;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001641:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20496395	20496735	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001641;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001641;transcript_name=HG002_chrY_T0001641;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001641:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473641	20494470	1000	+	.	source_transcript=ENST00000789743.1;source_transcript_name=TXLNGY-244;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789743.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001642;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001642;gene_name=TXLNGY;ID=HG002_chrY_T0001642;Name=TXLNGY
HG002_chrY	CAT	exon	20473641	20473794	.	+	.	source_transcript=ENST00000789743.1;source_transcript_name=TXLNGY-244;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789743.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001642;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001642;transcript_name=HG002_chrY_T0001642;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001642:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473795	20493521	.	+	.	source_transcript=ENST00000789743.1;source_transcript_name=TXLNGY-244;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789743.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001642;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001642;transcript_name=HG002_chrY_T0001642;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001642:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20494470	.	+	.	source_transcript=ENST00000789743.1;source_transcript_name=TXLNGY-244;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789743.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001642;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001642;transcript_name=HG002_chrY_T0001642;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001642:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473641	20496735	1000	+	.	source_transcript=ENST00000686905.2;source_transcript_name=TXLNGY-216;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686905.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686905.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001643;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001643;gene_name=TXLNGY;ID=HG002_chrY_T0001643;Name=TXLNGY
HG002_chrY	CAT	exon	20473641	20473794	.	+	.	source_transcript=ENST00000686905.2;source_transcript_name=TXLNGY-216;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686905.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686905.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001643;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001643;transcript_name=HG002_chrY_T0001643;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001643:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473795	20493521	.	+	.	source_transcript=ENST00000686905.2;source_transcript_name=TXLNGY-216;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686905.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686905.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001643;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001643;transcript_name=HG002_chrY_T0001643;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001643:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000686905.2;source_transcript_name=TXLNGY-216;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686905.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686905.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001643;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001643;transcript_name=HG002_chrY_T0001643;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001643:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20494681	.	+	.	source_transcript=ENST00000686905.2;source_transcript_name=TXLNGY-216;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686905.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686905.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001643;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001643;transcript_name=HG002_chrY_T0001643;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001643:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20494682	20496735	.	+	.	source_transcript=ENST00000686905.2;source_transcript_name=TXLNGY-216;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686905.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686905.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001643;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001643;transcript_name=HG002_chrY_T0001643;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001643:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473643	20496731	1000	+	.	source_transcript=ENST00000693214.2;source_transcript_name=TXLNGY-218;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693214.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000693214.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001644;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001644;gene_name=TXLNGY;ID=HG002_chrY_T0001644;Name=TXLNGY
HG002_chrY	CAT	exon	20473643	20473882	.	+	.	source_transcript=ENST00000693214.2;source_transcript_name=TXLNGY-218;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693214.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000693214.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001644;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001644;transcript_name=HG002_chrY_T0001644;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001644:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473883	20493521	.	+	.	source_transcript=ENST00000693214.2;source_transcript_name=TXLNGY-218;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693214.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000693214.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001644;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001644;transcript_name=HG002_chrY_T0001644;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001644:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000693214.2;source_transcript_name=TXLNGY-218;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693214.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000693214.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001644;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001644;transcript_name=HG002_chrY_T0001644;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001644:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20494681	.	+	.	source_transcript=ENST00000693214.2;source_transcript_name=TXLNGY-218;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693214.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000693214.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001644;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001644;transcript_name=HG002_chrY_T0001644;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001644:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20494682	20496731	.	+	.	source_transcript=ENST00000693214.2;source_transcript_name=TXLNGY-218;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693214.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000693214.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001644;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001644;transcript_name=HG002_chrY_T0001644;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001644:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473643	20500477	1000	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001645;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001645;gene_name=TXLNGY;ID=HG002_chrY_T0001645;Name=TXLNGY
HG002_chrY	CAT	exon	20473643	20473882	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001645;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001645;transcript_name=HG002_chrY_T0001645;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001645:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473883	20493521	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001645;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001645;transcript_name=HG002_chrY_T0001645;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001645:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001645;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001645;transcript_name=HG002_chrY_T0001645;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001645:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20494681	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001645;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001645;transcript_name=HG002_chrY_T0001645;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001645:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20494682	20494723	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001645;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001645;transcript_name=HG002_chrY_T0001645;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001645:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20494724	20495832	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001645;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001645;transcript_name=HG002_chrY_T0001645;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001645:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20495833	20495924	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001645;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001645;transcript_name=HG002_chrY_T0001645;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001645:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20495925	20498091	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001645;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001645;transcript_name=HG002_chrY_T0001645;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001645:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20498092	20498271	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001645;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001645;transcript_name=HG002_chrY_T0001645;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001645:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20498272	20499710	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001645;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001645;transcript_name=HG002_chrY_T0001645;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001645:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20499711	20500477	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001645;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001645;transcript_name=HG002_chrY_T0001645;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001645:5;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473646	20496161	1000	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001646;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001646;gene_name=TXLNGY;ID=HG002_chrY_T0001646;Name=TXLNGY
HG002_chrY	CAT	exon	20473646	20473882	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001646;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001646;transcript_name=HG002_chrY_T0001646;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001646:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473883	20475696	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001646;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001646;transcript_name=HG002_chrY_T0001646;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001646:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20475697	20475771	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001646;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001646;transcript_name=HG002_chrY_T0001646;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001646:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20475772	20493521	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001646;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001646;transcript_name=HG002_chrY_T0001646;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001646:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001646;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001646;transcript_name=HG002_chrY_T0001646;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001646:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20494681	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001646;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001646;transcript_name=HG002_chrY_T0001646;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001646:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20494682	20496161	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001646;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001646;transcript_name=HG002_chrY_T0001646;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001646:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473654	20500473	1000	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001647;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001647;gene_name=TXLNGY;ID=HG002_chrY_T0001647;Name=TXLNGY
HG002_chrY	CAT	exon	20473654	20473882	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001647;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001647;transcript_name=HG002_chrY_T0001647;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001647:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473883	20493521	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001647;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001647;transcript_name=HG002_chrY_T0001647;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001647:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001647;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001647;transcript_name=HG002_chrY_T0001647;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001647:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20495832	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001647;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001647;transcript_name=HG002_chrY_T0001647;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001647:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20495833	20495924	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001647;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001647;transcript_name=HG002_chrY_T0001647;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001647:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20495925	20499710	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001647;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001647;transcript_name=HG002_chrY_T0001647;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001647:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20499711	20500473	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001647;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001647;transcript_name=HG002_chrY_T0001647;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001647:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473659	20496735	1000	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001648;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001648;gene_name=TXLNGY;ID=HG002_chrY_T0001648;Name=TXLNGY
HG002_chrY	CAT	exon	20473659	20473882	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001648;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001648;transcript_name=HG002_chrY_T0001648;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001648:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473883	20493521	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001648;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001648;transcript_name=HG002_chrY_T0001648;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001648:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001648;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001648;transcript_name=HG002_chrY_T0001648;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001648:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20494681	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001648;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001648;transcript_name=HG002_chrY_T0001648;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001648:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20494682	20494723	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001648;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001648;transcript_name=HG002_chrY_T0001648;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001648:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20494724	20494854	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001648;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001648;transcript_name=HG002_chrY_T0001648;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001648:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20494855	20494962	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001648;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001648;transcript_name=HG002_chrY_T0001648;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001648:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20494963	20495832	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001648;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001648;transcript_name=HG002_chrY_T0001648;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001648:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20495833	20495924	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001648;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001648;transcript_name=HG002_chrY_T0001648;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001648:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20495925	20496394	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001648;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001648;transcript_name=HG002_chrY_T0001648;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001648:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20496395	20496735	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001648;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001648;transcript_name=HG002_chrY_T0001648;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001648:5;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473662	20496735	1000	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001649;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001649;gene_name=TXLNGY;ID=HG002_chrY_T0001649;Name=TXLNGY
HG002_chrY	CAT	exon	20473662	20473882	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001649;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001649;transcript_name=HG002_chrY_T0001649;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001649:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473883	20493521	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001649;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001649;transcript_name=HG002_chrY_T0001649;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001649:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001649;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001649;transcript_name=HG002_chrY_T0001649;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001649:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20495832	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001649;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001649;transcript_name=HG002_chrY_T0001649;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001649:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20495833	20495924	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001649;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001649;transcript_name=HG002_chrY_T0001649;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001649:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20495925	20496394	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001649;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001649;transcript_name=HG002_chrY_T0001649;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001649:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20496395	20496735	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001649;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001649;transcript_name=HG002_chrY_T0001649;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001649:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473662	20496735	1000	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001650;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001650;gene_name=TXLNGY;ID=HG002_chrY_T0001650;Name=TXLNGY
HG002_chrY	CAT	exon	20473662	20473882	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001650;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001650;transcript_name=HG002_chrY_T0001650;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001650:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473883	20493521	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001650;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001650;transcript_name=HG002_chrY_T0001650;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001650:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001650;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001650;transcript_name=HG002_chrY_T0001650;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001650:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20494854	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001650;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001650;transcript_name=HG002_chrY_T0001650;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001650:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20494855	20494962	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001650;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001650;transcript_name=HG002_chrY_T0001650;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001650:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20494963	20495832	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001650;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001650;transcript_name=HG002_chrY_T0001650;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001650:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20495833	20495924	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001650;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001650;transcript_name=HG002_chrY_T0001650;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001650:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20495925	20496394	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001650;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001650;transcript_name=HG002_chrY_T0001650;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001650:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20496395	20496735	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001650;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001650;transcript_name=HG002_chrY_T0001650;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001650:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473662	20496735	1000	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001651;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001651;gene_name=TXLNGY;ID=HG002_chrY_T0001651;Name=TXLNGY
HG002_chrY	CAT	exon	20473662	20473794	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001651;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001651;transcript_name=HG002_chrY_T0001651;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001651:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473795	20493521	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001651;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001651;transcript_name=HG002_chrY_T0001651;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001651:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001651;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001651;transcript_name=HG002_chrY_T0001651;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001651:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20495832	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001651;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001651;transcript_name=HG002_chrY_T0001651;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001651:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20495833	20495924	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001651;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001651;transcript_name=HG002_chrY_T0001651;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001651:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20495925	20496394	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001651;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001651;transcript_name=HG002_chrY_T0001651;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001651:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20496395	20496735	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001651;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001651;transcript_name=HG002_chrY_T0001651;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001651:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473662	20496588	1000	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001652;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001652;gene_name=TXLNGY;ID=HG002_chrY_T0001652;Name=TXLNGY
HG002_chrY	CAT	exon	20473662	20473882	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001652;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001652;transcript_name=HG002_chrY_T0001652;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001652:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473883	20475185	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001652;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001652;transcript_name=HG002_chrY_T0001652;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001652:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20475186	20475231	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001652;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001652;transcript_name=HG002_chrY_T0001652;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001652:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20475232	20493521	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001652;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001652;transcript_name=HG002_chrY_T0001652;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001652:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001652;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001652;transcript_name=HG002_chrY_T0001652;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001652:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20495832	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001652;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001652;transcript_name=HG002_chrY_T0001652;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001652:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20495833	20495924	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001652;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001652;transcript_name=HG002_chrY_T0001652;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001652:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20495925	20496394	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001652;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001652;transcript_name=HG002_chrY_T0001652;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001652:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20496395	20496588	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001652;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001652;transcript_name=HG002_chrY_T0001652;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001652:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473662	20500470	1000	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001653;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001653;gene_name=TXLNGY;ID=HG002_chrY_T0001653;Name=TXLNGY
HG002_chrY	CAT	exon	20473662	20473794	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001653;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001653;transcript_name=HG002_chrY_T0001653;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001653:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473795	20493521	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001653;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001653;transcript_name=HG002_chrY_T0001653;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001653:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001653;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001653;transcript_name=HG002_chrY_T0001653;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001653:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20494681	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001653;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001653;transcript_name=HG002_chrY_T0001653;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001653:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20494682	20494723	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001653;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001653;transcript_name=HG002_chrY_T0001653;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001653:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20494724	20494854	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001653;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001653;transcript_name=HG002_chrY_T0001653;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001653:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20494855	20494962	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001653;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001653;transcript_name=HG002_chrY_T0001653;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001653:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20494963	20495832	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001653;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001653;transcript_name=HG002_chrY_T0001653;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001653:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20495833	20495924	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001653;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001653;transcript_name=HG002_chrY_T0001653;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001653:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20495925	20498091	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001653;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001653;transcript_name=HG002_chrY_T0001653;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001653:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20498092	20498271	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001653;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001653;transcript_name=HG002_chrY_T0001653;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001653:5;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20498272	20499710	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001653;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001653;transcript_name=HG002_chrY_T0001653;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001653:5;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20499711	20500470	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001653;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001653;transcript_name=HG002_chrY_T0001653;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001653:6;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473662	20500473	1000	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001654;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001654;gene_name=TXLNGY;ID=HG002_chrY_T0001654;Name=TXLNGY
HG002_chrY	CAT	exon	20473662	20473794	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001654;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001654;transcript_name=HG002_chrY_T0001654;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001654:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473795	20493521	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001654;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001654;transcript_name=HG002_chrY_T0001654;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001654:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001654;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001654;transcript_name=HG002_chrY_T0001654;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001654:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20494681	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001654;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001654;transcript_name=HG002_chrY_T0001654;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001654:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20494682	20494723	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001654;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001654;transcript_name=HG002_chrY_T0001654;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001654:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20494724	20494854	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001654;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001654;transcript_name=HG002_chrY_T0001654;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001654:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20494855	20494962	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001654;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001654;transcript_name=HG002_chrY_T0001654;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001654:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20494963	20495832	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001654;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001654;transcript_name=HG002_chrY_T0001654;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001654:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20495833	20495924	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001654;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001654;transcript_name=HG002_chrY_T0001654;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001654:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20495925	20496921	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001654;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001654;transcript_name=HG002_chrY_T0001654;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001654:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20496922	20497084	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001654;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001654;transcript_name=HG002_chrY_T0001654;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001654:5;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20497085	20498091	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001654;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001654;transcript_name=HG002_chrY_T0001654;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001654:5;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20498092	20498271	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001654;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001654;transcript_name=HG002_chrY_T0001654;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001654:6;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20498272	20499710	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001654;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001654;transcript_name=HG002_chrY_T0001654;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001654:6;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20499711	20500473	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001654;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001654;transcript_name=HG002_chrY_T0001654;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001654:7;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473662	20500473	1000	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001655;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001655;gene_name=TXLNGY;ID=HG002_chrY_T0001655;Name=TXLNGY
HG002_chrY	CAT	exon	20473662	20473794	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001655;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001655;transcript_name=HG002_chrY_T0001655;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001655:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473795	20493521	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001655;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001655;transcript_name=HG002_chrY_T0001655;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001655:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001655;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001655;transcript_name=HG002_chrY_T0001655;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001655:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20494854	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001655;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001655;transcript_name=HG002_chrY_T0001655;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001655:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20494855	20494962	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001655;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001655;transcript_name=HG002_chrY_T0001655;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001655:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20494963	20495832	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001655;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001655;transcript_name=HG002_chrY_T0001655;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001655:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20495833	20495924	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001655;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001655;transcript_name=HG002_chrY_T0001655;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001655:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20495925	20498091	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001655;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001655;transcript_name=HG002_chrY_T0001655;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001655:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20498092	20498271	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001655;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001655;transcript_name=HG002_chrY_T0001655;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001655:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20498272	20499710	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001655;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001655;transcript_name=HG002_chrY_T0001655;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001655:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20499711	20500473	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001655;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001655;transcript_name=HG002_chrY_T0001655;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001655:5;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473664	20496731	1000	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001656;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001656;gene_name=TXLNGY;ID=HG002_chrY_T0001656;Name=TXLNGY
HG002_chrY	CAT	exon	20473664	20473882	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001656;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001656;transcript_name=HG002_chrY_T0001656;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001656:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473883	20493532	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001656;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001656;transcript_name=HG002_chrY_T0001656;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001656:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493533	20493819	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001656;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001656;transcript_name=HG002_chrY_T0001656;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001656:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20494854	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001656;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001656;transcript_name=HG002_chrY_T0001656;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001656:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20494855	20494962	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001656;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001656;transcript_name=HG002_chrY_T0001656;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001656:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20494963	20495832	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001656;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001656;transcript_name=HG002_chrY_T0001656;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001656:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20495833	20495924	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001656;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001656;transcript_name=HG002_chrY_T0001656;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001656:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20495925	20496394	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001656;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001656;transcript_name=HG002_chrY_T0001656;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001656:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20496395	20496731	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001656;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001656;transcript_name=HG002_chrY_T0001656;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001656:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473664	20496735	1000	+	.	source_transcript=ENST00000789729.1;source_transcript_name=TXLNGY-230;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001657;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001657;gene_name=TXLNGY;ID=HG002_chrY_T0001657;Name=TXLNGY
HG002_chrY	CAT	exon	20473664	20473882	.	+	.	source_transcript=ENST00000789729.1;source_transcript_name=TXLNGY-230;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001657;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001657;transcript_name=HG002_chrY_T0001657;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001657:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473883	20493521	.	+	.	source_transcript=ENST00000789729.1;source_transcript_name=TXLNGY-230;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001657;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001657;transcript_name=HG002_chrY_T0001657;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001657:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000789729.1;source_transcript_name=TXLNGY-230;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001657;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001657;transcript_name=HG002_chrY_T0001657;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001657:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20496394	.	+	.	source_transcript=ENST00000789729.1;source_transcript_name=TXLNGY-230;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001657;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001657;transcript_name=HG002_chrY_T0001657;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001657:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20496395	20496735	.	+	.	source_transcript=ENST00000789729.1;source_transcript_name=TXLNGY-230;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001657;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001657;transcript_name=HG002_chrY_T0001657;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001657:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473667	20500473	1000	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001658;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001658;gene_name=TXLNGY;ID=HG002_chrY_T0001658;Name=TXLNGY
HG002_chrY	CAT	exon	20473667	20473794	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001658;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001658;transcript_name=HG002_chrY_T0001658;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001658:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473795	20493521	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001658;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001658;transcript_name=HG002_chrY_T0001658;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001658:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493704	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001658;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001658;transcript_name=HG002_chrY_T0001658;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001658:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493705	20495832	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001658;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001658;transcript_name=HG002_chrY_T0001658;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001658:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20495833	20495924	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001658;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001658;transcript_name=HG002_chrY_T0001658;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001658:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20495925	20498091	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001658;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001658;transcript_name=HG002_chrY_T0001658;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001658:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20498092	20498271	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001658;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001658;transcript_name=HG002_chrY_T0001658;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001658:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20498272	20499710	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001658;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001658;transcript_name=HG002_chrY_T0001658;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001658:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20499711	20500473	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001658;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001658;transcript_name=HG002_chrY_T0001658;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001658:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473668	20496735	1000	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001659;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001659;gene_name=TXLNGY;ID=HG002_chrY_T0001659;Name=TXLNGY
HG002_chrY	CAT	exon	20473668	20473794	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001659;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001659;transcript_name=HG002_chrY_T0001659;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001659:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473795	20493521	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001659;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001659;transcript_name=HG002_chrY_T0001659;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001659:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001659;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001659;transcript_name=HG002_chrY_T0001659;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001659:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20494681	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001659;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001659;transcript_name=HG002_chrY_T0001659;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001659:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20494682	20494723	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001659;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001659;transcript_name=HG002_chrY_T0001659;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001659:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20494724	20494854	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001659;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001659;transcript_name=HG002_chrY_T0001659;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001659:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20494855	20494962	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001659;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001659;transcript_name=HG002_chrY_T0001659;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001659:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20494963	20495832	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001659;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001659;transcript_name=HG002_chrY_T0001659;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001659:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20495833	20495924	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001659;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001659;transcript_name=HG002_chrY_T0001659;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001659:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20495925	20496394	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001659;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001659;transcript_name=HG002_chrY_T0001659;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001659:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20496395	20496735	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001659;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001659;transcript_name=HG002_chrY_T0001659;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001659:5;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473670	20494470	1000	+	.	source_transcript=ENST00000789744.1;source_transcript_name=TXLNGY-245;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789744.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001660;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001660;gene_name=TXLNGY;ID=HG002_chrY_T0001660;Name=TXLNGY
HG002_chrY	CAT	exon	20473670	20473882	.	+	.	source_transcript=ENST00000789744.1;source_transcript_name=TXLNGY-245;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789744.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001660;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001660;transcript_name=HG002_chrY_T0001660;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001660:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473883	20493532	.	+	.	source_transcript=ENST00000789744.1;source_transcript_name=TXLNGY-245;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789744.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001660;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001660;transcript_name=HG002_chrY_T0001660;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001660:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493533	20494470	.	+	.	source_transcript=ENST00000789744.1;source_transcript_name=TXLNGY-245;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789744.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001660;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001660;transcript_name=HG002_chrY_T0001660;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001660:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473675	20500467	1000	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001661;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001661;gene_name=TXLNGY;ID=HG002_chrY_T0001661;Name=TXLNGY
HG002_chrY	CAT	exon	20473675	20473794	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001661;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001661;transcript_name=HG002_chrY_T0001661;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001661:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473795	20493521	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001661;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001661;transcript_name=HG002_chrY_T0001661;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001661:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001661;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001661;transcript_name=HG002_chrY_T0001661;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001661:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20494681	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001661;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001661;transcript_name=HG002_chrY_T0001661;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001661:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20494682	20494723	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001661;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001661;transcript_name=HG002_chrY_T0001661;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001661:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20494724	20494854	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001661;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001661;transcript_name=HG002_chrY_T0001661;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001661:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20494855	20494962	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001661;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001661;transcript_name=HG002_chrY_T0001661;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001661:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20494963	20495832	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001661;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001661;transcript_name=HG002_chrY_T0001661;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001661:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20495833	20495924	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001661;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001661;transcript_name=HG002_chrY_T0001661;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001661:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20495925	20499710	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001661;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001661;transcript_name=HG002_chrY_T0001661;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001661:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20499711	20500467	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001661;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001661;transcript_name=HG002_chrY_T0001661;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001661:5;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473678	20494470	1000	+	.	source_transcript=ENST00000789745.1;source_transcript_name=TXLNGY-246;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789745.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001662;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001662;gene_name=TXLNGY;ID=HG002_chrY_T0001662;Name=TXLNGY
HG002_chrY	CAT	exon	20473678	20473882	.	+	.	source_transcript=ENST00000789745.1;source_transcript_name=TXLNGY-246;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789745.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001662;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001662;transcript_name=HG002_chrY_T0001662;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001662:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473883	20483016	.	+	.	source_transcript=ENST00000789745.1;source_transcript_name=TXLNGY-246;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789745.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001662;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001662;transcript_name=HG002_chrY_T0001662;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001662:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20483017	20483134	.	+	.	source_transcript=ENST00000789745.1;source_transcript_name=TXLNGY-246;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789745.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001662;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001662;transcript_name=HG002_chrY_T0001662;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001662:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20483135	20493521	.	+	.	source_transcript=ENST00000789745.1;source_transcript_name=TXLNGY-246;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789745.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001662;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001662;transcript_name=HG002_chrY_T0001662;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001662:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20494470	.	+	.	source_transcript=ENST00000789745.1;source_transcript_name=TXLNGY-246;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789745.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001662;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001662;transcript_name=HG002_chrY_T0001662;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001662:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473678	20500470	1000	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001663;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001663;gene_name=TXLNGY;ID=HG002_chrY_T0001663;Name=TXLNGY
HG002_chrY	CAT	exon	20473678	20473794	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001663;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001663;transcript_name=HG002_chrY_T0001663;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001663:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473795	20493521	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001663;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001663;transcript_name=HG002_chrY_T0001663;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001663:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001663;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001663;transcript_name=HG002_chrY_T0001663;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001663:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20495832	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001663;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001663;transcript_name=HG002_chrY_T0001663;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001663:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20495833	20495924	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001663;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001663;transcript_name=HG002_chrY_T0001663;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001663:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20495925	20498091	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001663;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001663;transcript_name=HG002_chrY_T0001663;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001663:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20498092	20498271	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001663;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001663;transcript_name=HG002_chrY_T0001663;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001663:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20498272	20499710	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001663;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001663;transcript_name=HG002_chrY_T0001663;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001663:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20499711	20500470	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001663;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001663;transcript_name=HG002_chrY_T0001663;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001663:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473680	20496735	1000	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001664;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001664;gene_name=TXLNGY;ID=HG002_chrY_T0001664;Name=TXLNGY
HG002_chrY	CAT	exon	20473680	20473794	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001664;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001664;transcript_name=HG002_chrY_T0001664;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001664:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473795	20493521	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001664;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001664;transcript_name=HG002_chrY_T0001664;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001664:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001664;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001664;transcript_name=HG002_chrY_T0001664;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001664:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20494681	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001664;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001664;transcript_name=HG002_chrY_T0001664;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001664:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20494682	20495924	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001664;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001664;transcript_name=HG002_chrY_T0001664;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001664:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20495925	20496394	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001664;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001664;transcript_name=HG002_chrY_T0001664;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001664:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20496395	20496735	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001664;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001664;transcript_name=HG002_chrY_T0001664;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001664:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473684	20475753	1000	+	.	source_transcript=ENST00000789748.1;source_transcript_name=TXLNGY-249;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789748.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001665;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001665;gene_name=TXLNGY;ID=HG002_chrY_T0001665;Name=TXLNGY
HG002_chrY	CAT	exon	20473684	20473882	.	+	.	source_transcript=ENST00000789748.1;source_transcript_name=TXLNGY-249;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789748.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001665;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001665;transcript_name=HG002_chrY_T0001665;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001665:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473883	20474152	.	+	.	source_transcript=ENST00000789748.1;source_transcript_name=TXLNGY-249;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789748.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001665;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001665;transcript_name=HG002_chrY_T0001665;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001665:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20474153	20474263	.	+	.	source_transcript=ENST00000789748.1;source_transcript_name=TXLNGY-249;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789748.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001665;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001665;transcript_name=HG002_chrY_T0001665;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001665:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20474264	20475696	.	+	.	source_transcript=ENST00000789748.1;source_transcript_name=TXLNGY-249;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789748.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001665;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001665;transcript_name=HG002_chrY_T0001665;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001665:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20475697	20475753	.	+	.	source_transcript=ENST00000789748.1;source_transcript_name=TXLNGY-249;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789748.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001665;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001665;transcript_name=HG002_chrY_T0001665;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001665:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473684	20496735	1000	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001666;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001666;gene_name=TXLNGY;ID=HG002_chrY_T0001666;Name=TXLNGY
HG002_chrY	CAT	exon	20473684	20473794	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001666;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001666;transcript_name=HG002_chrY_T0001666;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001666:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473795	20493521	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001666;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001666;transcript_name=HG002_chrY_T0001666;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001666:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001666;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001666;transcript_name=HG002_chrY_T0001666;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001666:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20494681	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001666;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001666;transcript_name=HG002_chrY_T0001666;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001666:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20494682	20495701	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001666;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001666;transcript_name=HG002_chrY_T0001666;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001666:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20495702	20495832	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001666;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001666;transcript_name=HG002_chrY_T0001666;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001666:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20495833	20495924	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001666;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001666;transcript_name=HG002_chrY_T0001666;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001666:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20495925	20496394	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001666;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001666;transcript_name=HG002_chrY_T0001666;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001666:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20496395	20496735	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001666;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001666;transcript_name=HG002_chrY_T0001666;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001666:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473688	20500478	1000	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001667;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001667;gene_name=TXLNGY;ID=HG002_chrY_T0001667;Name=TXLNGY
HG002_chrY	CAT	exon	20473688	20473882	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001667;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001667;transcript_name=HG002_chrY_T0001667;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001667:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473883	20493521	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001667;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001667;transcript_name=HG002_chrY_T0001667;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001667:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001667;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001667;transcript_name=HG002_chrY_T0001667;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001667:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20495832	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001667;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001667;transcript_name=HG002_chrY_T0001667;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001667:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20495833	20495924	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001667;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001667;transcript_name=HG002_chrY_T0001667;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001667:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20495925	20498091	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001667;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001667;transcript_name=HG002_chrY_T0001667;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001667:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20498092	20498271	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001667;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001667;transcript_name=HG002_chrY_T0001667;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001667:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20498272	20499710	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001667;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001667;transcript_name=HG002_chrY_T0001667;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001667:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20499711	20500478	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001667;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001667;transcript_name=HG002_chrY_T0001667;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001667:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473689	20496161	1000	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001668;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001668;gene_name=TXLNGY;ID=HG002_chrY_T0001668;Name=TXLNGY
HG002_chrY	CAT	exon	20473689	20473882	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001668;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001668;transcript_name=HG002_chrY_T0001668;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001668:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473883	20483016	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001668;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001668;transcript_name=HG002_chrY_T0001668;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001668:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20483017	20483134	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001668;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001668;transcript_name=HG002_chrY_T0001668;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001668:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20483135	20493521	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001668;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001668;transcript_name=HG002_chrY_T0001668;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001668:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001668;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001668;transcript_name=HG002_chrY_T0001668;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001668:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20494681	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001668;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001668;transcript_name=HG002_chrY_T0001668;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001668:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20494682	20496161	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001668;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001668;transcript_name=HG002_chrY_T0001668;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001668:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473690	20497036	1000	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001669;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001669;gene_name=TXLNGY;ID=HG002_chrY_T0001669;Name=TXLNGY
HG002_chrY	CAT	exon	20473690	20473882	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001669;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001669;transcript_name=HG002_chrY_T0001669;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001669:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473883	20493521	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001669;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001669;transcript_name=HG002_chrY_T0001669;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001669:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001669;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001669;transcript_name=HG002_chrY_T0001669;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001669:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20495832	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001669;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001669;transcript_name=HG002_chrY_T0001669;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001669:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20495833	20495924	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001669;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001669;transcript_name=HG002_chrY_T0001669;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001669:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20495925	20496921	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001669;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001669;transcript_name=HG002_chrY_T0001669;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001669:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20496922	20497036	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001669;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001669;transcript_name=HG002_chrY_T0001669;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001669:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473692	20500473	1000	+	.	source_transcript=ENST00000789725.1;source_transcript_name=TXLNGY-226;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789725.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001670;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001670;gene_name=TXLNGY;ID=HG002_chrY_T0001670;Name=TXLNGY
HG002_chrY	CAT	exon	20473692	20473882	.	+	.	source_transcript=ENST00000789725.1;source_transcript_name=TXLNGY-226;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001670;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001670;transcript_name=HG002_chrY_T0001670;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001670:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473883	20493521	.	+	.	source_transcript=ENST00000789725.1;source_transcript_name=TXLNGY-226;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001670;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001670;transcript_name=HG002_chrY_T0001670;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001670:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000789725.1;source_transcript_name=TXLNGY-226;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001670;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001670;transcript_name=HG002_chrY_T0001670;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001670:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20499710	.	+	.	source_transcript=ENST00000789725.1;source_transcript_name=TXLNGY-226;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001670;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001670;transcript_name=HG002_chrY_T0001670;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001670:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20499711	20500473	.	+	.	source_transcript=ENST00000789725.1;source_transcript_name=TXLNGY-226;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001670;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001670;transcript_name=HG002_chrY_T0001670;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001670:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473706	20496602	1000	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001672;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001672;gene_name=TXLNGY;ID=HG002_chrY_T0001672;Name=TXLNGY
HG002_chrY	CAT	exon	20473706	20473882	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001672;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001672;transcript_name=HG002_chrY_T0001672;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001672:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473883	20493521	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001672;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001672;transcript_name=HG002_chrY_T0001672;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001672:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001672;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001672;transcript_name=HG002_chrY_T0001672;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001672:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20494681	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001672;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001672;transcript_name=HG002_chrY_T0001672;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001672:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20494682	20494723	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001672;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001672;transcript_name=HG002_chrY_T0001672;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001672:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20494724	20495832	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001672;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001672;transcript_name=HG002_chrY_T0001672;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001672:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20495833	20495924	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001672;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001672;transcript_name=HG002_chrY_T0001672;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001672:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20495925	20496394	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001672;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001672;transcript_name=HG002_chrY_T0001672;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001672:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20496395	20496602	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001672;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001672;transcript_name=HG002_chrY_T0001672;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001672:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20473898	20496602	1000	+	.	source_transcript=ENST00000789736.1;source_transcript_name=TXLNGY-237;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789736.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001673;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001673;gene_name=TXLNGY;ID=HG002_chrY_T0001673;Name=TXLNGY
HG002_chrY	CAT	exon	20473898	20474263	.	+	.	source_transcript=ENST00000789736.1;source_transcript_name=TXLNGY-237;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789736.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001673;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001673;transcript_name=HG002_chrY_T0001673;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001673:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20474264	20493521	.	+	.	source_transcript=ENST00000789736.1;source_transcript_name=TXLNGY-237;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789736.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001673;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001673;transcript_name=HG002_chrY_T0001673;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001673:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000789736.1;source_transcript_name=TXLNGY-237;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789736.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001673;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001673;transcript_name=HG002_chrY_T0001673;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001673:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20496394	.	+	.	source_transcript=ENST00000789736.1;source_transcript_name=TXLNGY-237;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789736.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001673;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001673;transcript_name=HG002_chrY_T0001673;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001673:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20496395	20496602	.	+	.	source_transcript=ENST00000789736.1;source_transcript_name=TXLNGY-237;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789736.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001673;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001673;transcript_name=HG002_chrY_T0001673;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001673:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20474099	20496161	1000	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001674;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001674;gene_name=TXLNGY;ID=HG002_chrY_T0001674;Name=TXLNGY
HG002_chrY	CAT	exon	20474099	20474263	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001674;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001674;transcript_name=HG002_chrY_T0001674;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001674:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20474264	20475696	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001674;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001674;transcript_name=HG002_chrY_T0001674;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001674:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20475697	20475771	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001674;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001674;transcript_name=HG002_chrY_T0001674;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001674:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20475772	20493521	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001674;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001674;transcript_name=HG002_chrY_T0001674;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001674:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001674;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001674;transcript_name=HG002_chrY_T0001674;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001674:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20494681	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001674;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001674;transcript_name=HG002_chrY_T0001674;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001674:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20494682	20496161	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001674;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001674;transcript_name=HG002_chrY_T0001674;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001674:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20474151	20499734	1000	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001675;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001675;gene_name=TXLNGY;ID=HG002_chrY_T0001675;Name=TXLNGY
HG002_chrY	CAT	exon	20474151	20474263	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001675;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001675;transcript_name=HG002_chrY_T0001675;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001675:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20474264	20493521	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001675;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001675;transcript_name=HG002_chrY_T0001675;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001675:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001675;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001675;transcript_name=HG002_chrY_T0001675;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001675:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20495832	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001675;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001675;transcript_name=HG002_chrY_T0001675;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001675:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20495833	20495924	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001675;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001675;transcript_name=HG002_chrY_T0001675;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001675:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20495925	20498091	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001675;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001675;transcript_name=HG002_chrY_T0001675;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001675:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20498092	20498271	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001675;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001675;transcript_name=HG002_chrY_T0001675;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001675:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20498272	20499710	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001675;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001675;transcript_name=HG002_chrY_T0001675;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001675:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20499711	20499734	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001675;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001675;transcript_name=HG002_chrY_T0001675;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001675:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20474151	20496735	1000	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001676;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001676;gene_name=TXLNGY;ID=HG002_chrY_T0001676;Name=TXLNGY
HG002_chrY	CAT	exon	20474151	20474263	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001676;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001676;transcript_name=HG002_chrY_T0001676;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001676:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20474264	20483016	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001676;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001676;transcript_name=HG002_chrY_T0001676;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001676:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20483017	20483134	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001676;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001676;transcript_name=HG002_chrY_T0001676;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001676:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20483135	20493521	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001676;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001676;transcript_name=HG002_chrY_T0001676;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001676:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001676;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001676;transcript_name=HG002_chrY_T0001676;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001676:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20494681	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001676;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001676;transcript_name=HG002_chrY_T0001676;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001676:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20494682	20495701	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001676;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001676;transcript_name=HG002_chrY_T0001676;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001676:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20495702	20495832	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001676;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001676;transcript_name=HG002_chrY_T0001676;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001676:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20495833	20495924	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001676;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001676;transcript_name=HG002_chrY_T0001676;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001676:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20495925	20496394	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001676;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001676;transcript_name=HG002_chrY_T0001676;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001676:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20496395	20496735	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001676;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001676;transcript_name=HG002_chrY_T0001676;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001676:5;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20474155	20496731	1000	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001677;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001677;gene_name=TXLNGY;ID=HG002_chrY_T0001677;Name=TXLNGY
HG002_chrY	CAT	exon	20474155	20474263	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001677;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001677;transcript_name=HG002_chrY_T0001677;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001677:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20474264	20493521	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001677;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001677;transcript_name=HG002_chrY_T0001677;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001677:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001677;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001677;transcript_name=HG002_chrY_T0001677;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001677:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20494681	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001677;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001677;transcript_name=HG002_chrY_T0001677;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001677:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20494682	20494723	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001677;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001677;transcript_name=HG002_chrY_T0001677;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001677:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20494724	20494854	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001677;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001677;transcript_name=HG002_chrY_T0001677;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001677:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20494855	20494962	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001677;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001677;transcript_name=HG002_chrY_T0001677;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001677:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20494963	20495832	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001677;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001677;transcript_name=HG002_chrY_T0001677;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001677:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20495833	20495924	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001677;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001677;transcript_name=HG002_chrY_T0001677;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001677:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20495925	20496394	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001677;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001677;transcript_name=HG002_chrY_T0001677;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001677:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20496395	20496731	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001677;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001677;transcript_name=HG002_chrY_T0001677;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001677:5;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20474157	20493813	1000	+	.	source_transcript=ENST00000789746.1;source_transcript_name=TXLNGY-247;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789746.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001678;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001678;gene_name=TXLNGY;ID=HG002_chrY_T0001678;Name=TXLNGY
HG002_chrY	CAT	exon	20474157	20474263	.	+	.	source_transcript=ENST00000789746.1;source_transcript_name=TXLNGY-247;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789746.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001678;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001678;transcript_name=HG002_chrY_T0001678;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001678:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20474264	20475074	.	+	.	source_transcript=ENST00000789746.1;source_transcript_name=TXLNGY-247;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789746.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001678;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001678;transcript_name=HG002_chrY_T0001678;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001678:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20475075	20475231	.	+	.	source_transcript=ENST00000789746.1;source_transcript_name=TXLNGY-247;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789746.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001678;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001678;transcript_name=HG002_chrY_T0001678;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001678:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20475232	20493521	.	+	.	source_transcript=ENST00000789746.1;source_transcript_name=TXLNGY-247;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789746.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001678;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001678;transcript_name=HG002_chrY_T0001678;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001678:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493813	.	+	.	source_transcript=ENST00000789746.1;source_transcript_name=TXLNGY-247;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789746.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001678;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001678;transcript_name=HG002_chrY_T0001678;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001678:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20474170	20496516	1000	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001679;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001679;gene_name=TXLNGY;ID=HG002_chrY_T0001679;Name=TXLNGY
HG002_chrY	CAT	exon	20474170	20474263	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001679;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001679;transcript_name=HG002_chrY_T0001679;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001679:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20474264	20475185	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001679;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001679;transcript_name=HG002_chrY_T0001679;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001679:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20475186	20475231	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001679;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001679;transcript_name=HG002_chrY_T0001679;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001679:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20475232	20493521	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001679;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001679;transcript_name=HG002_chrY_T0001679;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001679:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001679;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001679;transcript_name=HG002_chrY_T0001679;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001679:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20494681	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001679;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001679;transcript_name=HG002_chrY_T0001679;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001679:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20494682	20494723	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001679;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001679;transcript_name=HG002_chrY_T0001679;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001679:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20494724	20494854	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001679;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001679;transcript_name=HG002_chrY_T0001679;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001679:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20494855	20494962	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001679;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001679;transcript_name=HG002_chrY_T0001679;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001679:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20494963	20495832	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001679;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001679;transcript_name=HG002_chrY_T0001679;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001679:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20495833	20495924	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001679;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001679;transcript_name=HG002_chrY_T0001679;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001679:5;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20495925	20496394	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001679;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001679;transcript_name=HG002_chrY_T0001679;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001679:5;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20496395	20496516	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001679;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001679;transcript_name=HG002_chrY_T0001679;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001679:6;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20494921	20499914	1000	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001680;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001680;gene_name=TXLNGY;ID=HG002_chrY_T0001680;Name=TXLNGY
HG002_chrY	CAT	exon	20494921	20494962	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001680;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001680;transcript_name=HG002_chrY_T0001680;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001680:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20494963	20495832	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001680;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001680;transcript_name=HG002_chrY_T0001680;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001680:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20495833	20495924	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001680;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001680;transcript_name=HG002_chrY_T0001680;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001680:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20495925	20498231	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001680;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001680;transcript_name=HG002_chrY_T0001680;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001680:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20498232	20498271	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001680;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001680;transcript_name=HG002_chrY_T0001680;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001680:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20498272	20499710	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001680;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001680;transcript_name=HG002_chrY_T0001680;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001680:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20499711	20499914	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001680;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001680;transcript_name=HG002_chrY_T0001680;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001680:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20497087	20500473	1000	+	.	source_transcript=ENST00000789747.1;source_transcript_name=TXLNGY-248;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789747.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001681;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001681;gene_name=TXLNGY;ID=HG002_chrY_T0001681;Name=TXLNGY
HG002_chrY	CAT	exon	20497087	20498271	.	+	.	source_transcript=ENST00000789747.1;source_transcript_name=TXLNGY-248;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789747.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001681;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001681;transcript_name=HG002_chrY_T0001681;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001681:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20498272	20499710	.	+	.	source_transcript=ENST00000789747.1;source_transcript_name=TXLNGY-248;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789747.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001681;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001681;transcript_name=HG002_chrY_T0001681;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001681:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20499711	20500473	.	+	.	source_transcript=ENST00000789747.1;source_transcript_name=TXLNGY-248;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789747.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001681;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001681;transcript_name=HG002_chrY_T0001681;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001681:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20498762	20512588	1000	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001682;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001682;gene_name=TXLNGY;ID=HG002_chrY_T0001682;Name=TXLNGY
HG002_chrY	CAT	exon	20498762	20499126	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001682;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001682;transcript_name=HG002_chrY_T0001682;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001682:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20499127	20499710	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001682;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001682;transcript_name=HG002_chrY_T0001682;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001682:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20499711	20503981	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001682;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001682;transcript_name=HG002_chrY_T0001682;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001682:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20503982	20506054	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001682;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001682;transcript_name=HG002_chrY_T0001682;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001682:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20506055	20506147	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001682;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001682;transcript_name=HG002_chrY_T0001682;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001682:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20506148	20508531	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001682;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001682;transcript_name=HG002_chrY_T0001682;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001682:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20508532	20508627	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001682;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001682;transcript_name=HG002_chrY_T0001682;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001682:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20508628	20510112	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001682;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001682;transcript_name=HG002_chrY_T0001682;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001682:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20510113	20512588	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001682;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001682;transcript_name=HG002_chrY_T0001682;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001682:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20499400	20500473	1000	+	.	source_transcript=ENST00000593000.1;source_transcript_name=TXLNGY-214;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000593000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000593000.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001683;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001683;gene_name=TXLNGY;ID=HG002_chrY_T0001683;Name=TXLNGY
HG002_chrY	CAT	exon	20499400	20500473	.	+	.	source_transcript=ENST00000593000.1;source_transcript_name=TXLNGY-214;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000593000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000593000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001683;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001683;transcript_name=HG002_chrY_T0001683;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001683:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20503673	20510367	1000	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001684;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_G0000538;transcript_name=HG002_chrY_T0001684;gene_name=TXLNGY;ID=HG002_chrY_T0001684;Name=TXLNGY
HG002_chrY	CAT	exon	20503673	20503981	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001684;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001684;transcript_name=HG002_chrY_T0001684;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001684:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20503982	20504867	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001684;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001684;transcript_name=HG002_chrY_T0001684;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001684:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20504868	20504955	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001684;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001684;transcript_name=HG002_chrY_T0001684;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001684:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20504956	20506054	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001684;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001684;transcript_name=HG002_chrY_T0001684;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001684:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20506055	20506147	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001684;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001684;transcript_name=HG002_chrY_T0001684;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001684:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20506148	20508531	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001684;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001684;transcript_name=HG002_chrY_T0001684;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001684:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20508532	20508627	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001684;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001684;transcript_name=HG002_chrY_T0001684;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001684:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20508628	20510112	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001684;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001684;transcript_name=HG002_chrY_T0001684;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001684:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20510113	20510367	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001684;gene_id=HG002_chrY_G0000538;Parent=HG002_chrY_T0001684;transcript_name=HG002_chrY_T0001684;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001684:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	20473694	20510436	.	+	.	source_gene_common_name=TXLNGY;source_gene=ENSG00000131002.15;gene_id=HG002_chrY_G0000539;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TXLNGY;gene_sources=liftoff;ID=HG002_chrY_G0000539;Name=TXLNGY
HG002_chrY	CAT	transcript	20473694	20510436	1000	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001671;gene_id=HG002_chrY_G0000539;Parent=HG002_chrY_G0000539;transcript_name=HG002_chrY_T0001671;gene_name=TXLNGY;ID=HG002_chrY_T0001671;Name=TXLNGY
HG002_chrY	CAT	exon	20473694	20473794	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001671;gene_id=HG002_chrY_G0000539;Parent=HG002_chrY_T0001671;transcript_name=HG002_chrY_T0001671;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001671:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20473795	20493521	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001671;gene_id=HG002_chrY_G0000539;Parent=HG002_chrY_T0001671;transcript_name=HG002_chrY_T0001671;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001671:0;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20493522	20493819	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001671;gene_id=HG002_chrY_G0000539;Parent=HG002_chrY_T0001671;transcript_name=HG002_chrY_T0001671;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001671:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20493820	20495832	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001671;gene_id=HG002_chrY_G0000539;Parent=HG002_chrY_T0001671;transcript_name=HG002_chrY_T0001671;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001671:1;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20495833	20495924	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001671;gene_id=HG002_chrY_G0000539;Parent=HG002_chrY_T0001671;transcript_name=HG002_chrY_T0001671;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001671:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20495925	20498091	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001671;gene_id=HG002_chrY_G0000539;Parent=HG002_chrY_T0001671;transcript_name=HG002_chrY_T0001671;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001671:2;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20498092	20498271	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001671;gene_id=HG002_chrY_G0000539;Parent=HG002_chrY_T0001671;transcript_name=HG002_chrY_T0001671;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001671:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20498272	20499710	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001671;gene_id=HG002_chrY_G0000539;Parent=HG002_chrY_T0001671;transcript_name=HG002_chrY_T0001671;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001671:3;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20499711	20499905	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001671;gene_id=HG002_chrY_G0000539;Parent=HG002_chrY_T0001671;transcript_name=HG002_chrY_T0001671;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001671:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20499906	20502326	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001671;gene_id=HG002_chrY_G0000539;Parent=HG002_chrY_T0001671;transcript_name=HG002_chrY_T0001671;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001671:4;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20502327	20502446	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001671;gene_id=HG002_chrY_G0000539;Parent=HG002_chrY_T0001671;transcript_name=HG002_chrY_T0001671;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001671:5;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20502447	20503906	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001671;gene_id=HG002_chrY_G0000539;Parent=HG002_chrY_T0001671;transcript_name=HG002_chrY_T0001671;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001671:5;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20503907	20503981	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001671;gene_id=HG002_chrY_G0000539;Parent=HG002_chrY_T0001671;transcript_name=HG002_chrY_T0001671;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001671:6;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20503982	20506054	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001671;gene_id=HG002_chrY_G0000539;Parent=HG002_chrY_T0001671;transcript_name=HG002_chrY_T0001671;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001671:6;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20506055	20506147	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001671;gene_id=HG002_chrY_G0000539;Parent=HG002_chrY_T0001671;transcript_name=HG002_chrY_T0001671;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001671:7;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20506148	20508531	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001671;gene_id=HG002_chrY_G0000539;Parent=HG002_chrY_T0001671;transcript_name=HG002_chrY_T0001671;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001671:7;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20508532	20508627	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001671;gene_id=HG002_chrY_G0000539;Parent=HG002_chrY_T0001671;transcript_name=HG002_chrY_T0001671;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001671:8;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20508628	20510112	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001671;gene_id=HG002_chrY_G0000539;Parent=HG002_chrY_T0001671;transcript_name=HG002_chrY_T0001671;gene_name=TXLNGY;ID=intron:HG002_chrY_T0001671:8;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20510113	20510436	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG002_chrY_T0001671;gene_id=HG002_chrY_G0000539;Parent=HG002_chrY_T0001671;transcript_name=HG002_chrY_T0001671;gene_name=TXLNGY;ID=exon:HG002_chrY_T0001671:9;Name=TXLNGY;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	20504504	20505073	.	+	.	source_gene_common_name=ENSG00000267793;source_gene=ENSG00000267793.1;gene_id=HG002_chrY_G0000540;gene_biotype=transcribed_processed_pseudogene;gene_name=ENSG00000267793;gene_sources=liftoff;ID=HG002_chrY_G0000540;Name=ENSG00000267793
HG002_chrY	CAT	transcript	20504504	20505073	1000	+	.	source_transcript=ENST00000586015.1;source_transcript_name=ENST00000586015;source_gene=ENSG00000267793.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000267793.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000586015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000586015.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000267793;transcript_id=HG002_chrY_T0001685;gene_id=HG002_chrY_G0000540;Parent=HG002_chrY_G0000540;transcript_name=HG002_chrY_T0001685;gene_name=ENSG00000267793;ID=HG002_chrY_T0001685;Name=ENSG00000267793
HG002_chrY	CAT	exon	20504504	20505073	.	+	.	source_transcript=ENST00000586015.1;source_transcript_name=ENST00000586015;source_gene=ENSG00000267793.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000267793.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000586015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000586015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000267793;transcript_id=HG002_chrY_T0001685;gene_id=HG002_chrY_G0000540;Parent=HG002_chrY_T0001685;transcript_name=HG002_chrY_T0001685;gene_name=ENSG00000267793;ID=exon:HG002_chrY_T0001685:0;Name=ENSG00000267793;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	20598242	20600907	.	-	.	source_gene_common_name=ENSG00000260197;source_gene=ENSG00000260197.1;alternative_source_transcripts=ENST00000566193.1,ENST00000566193.1;gene_id=HG002_chrY_G0000541;gene_biotype=lncRNA;gene_name=ENSG00000260197;gene_sources=liftoff;ID=HG002_chrY_G0000541;Name=ENSG00000260197
HG002_chrY	CAT	transcript	20598242	20600907	1000	-	.	source_transcript=ENST00000566193.1;source_transcript_name=ENST00000566193;source_gene=ENSG00000260197.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000260197.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000566193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000566193.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000260197;alternative_source_transcripts=ENST00000566193.1,ENST00000566193.1;transcript_id=HG002_chrY_T0001686;gene_id=HG002_chrY_G0000541;Parent=HG002_chrY_G0000541;transcript_name=HG002_chrY_T0001686;gene_name=ENSG00000260197;ID=HG002_chrY_T0001686;Name=ENSG00000260197
HG002_chrY	CAT	exon	20598242	20600907	.	-	.	source_transcript=ENST00000566193.1;source_transcript_name=ENST00000566193;source_gene=ENSG00000260197.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000260197.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000566193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000566193.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000260197;alternative_source_transcripts=ENST00000566193.1,ENST00000566193.1;transcript_id=HG002_chrY_T0001686;gene_id=HG002_chrY_G0000541;Parent=HG002_chrY_T0001686;transcript_name=HG002_chrY_T0001686;gene_name=ENSG00000260197;ID=exon:HG002_chrY_T0001686:0;Name=ENSG00000260197;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	20610166	20651240	.	-	.	source_gene_common_name=KDM5D;source_gene=ENSG00000012817.16;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;gene_id=HG002_chrY_G0000542;gene_biotype=protein_coding;gene_name=KDM5D;gene_sources=liftoff;ID=HG002_chrY_G0000542;Name=KDM5D
HG002_chrY	CAT	transcript	20610166	20651027	100	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_G0000542;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=HG002_chrY_T0001687;Name=KDM5D
HG002_chrY	CAT	exon	20610166	20612646	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=exon:HG002_chrY_T0001687:0;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20612296	20612646	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001687:0;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	20612296	20612298	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=stop_codon:HG002_chrY_T0001687;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20612647	20612741	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=intron:HG002_chrY_T0001687:0;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20612742	20612941	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=exon:HG002_chrY_T0001687:1;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20612742	20612941	.	-	2	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001687:1;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20612942	20613094	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=intron:HG002_chrY_T0001687:1;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20613095	20613164	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=exon:HG002_chrY_T0001687:2;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20613095	20613164	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001687:2;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20613165	20613447	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=intron:HG002_chrY_T0001687:2;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20613448	20614047	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=exon:HG002_chrY_T0001687:3;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20613448	20614047	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001687:3;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20614048	20614234	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=intron:HG002_chrY_T0001687:3;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20614235	20614372	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=exon:HG002_chrY_T0001687:4;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20614235	20614372	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001687:4;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20614373	20614544	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=intron:HG002_chrY_T0001687:4;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20614545	20614724	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=exon:HG002_chrY_T0001687:5;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20614545	20614724	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001687:5;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20614725	20615175	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=intron:HG002_chrY_T0001687:5;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20615176	20615314	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=exon:HG002_chrY_T0001687:6;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20615176	20615314	.	-	1	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001687:6;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20615315	20615751	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=intron:HG002_chrY_T0001687:6;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20615752	20616110	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=exon:HG002_chrY_T0001687:7;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20615752	20616110	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001687:7;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20616111	20616676	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=intron:HG002_chrY_T0001687:7;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20616677	20616773	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=exon:HG002_chrY_T0001687:8;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20616677	20616773	.	-	1	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001687:8;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20616774	20621652	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=intron:HG002_chrY_T0001687:8;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20621653	20621800	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=exon:HG002_chrY_T0001687:9;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20621653	20621800	.	-	2	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001687:9;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20621801	20621915	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=intron:HG002_chrY_T0001687:9;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20621916	20622040	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=exon:HG002_chrY_T0001687:10;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20621916	20622040	.	-	1	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001687:10;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20622041	20622123	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=intron:HG002_chrY_T0001687:10;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20622124	20622305	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=exon:HG002_chrY_T0001687:11;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20622124	20622305	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001687:11;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20622306	20622579	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=intron:HG002_chrY_T0001687:11;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20622580	20622774	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=exon:HG002_chrY_T0001687:12;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20622580	20622774	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001687:12;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20622775	20622896	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=intron:HG002_chrY_T0001687:12;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20622897	20623016	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=exon:HG002_chrY_T0001687:13;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20622897	20623016	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001687:13;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20623017	20627172	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=intron:HG002_chrY_T0001687:13;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20627173	20627335	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=exon:HG002_chrY_T0001687:14;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20627173	20627335	.	-	1	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001687:14;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20627336	20627430	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=intron:HG002_chrY_T0001687:14;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20627431	20627612	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=exon:HG002_chrY_T0001687:15;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20627431	20627612	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001687:15;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20627613	20638072	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=intron:HG002_chrY_T0001687:15;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20638073	20638231	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=exon:HG002_chrY_T0001687:16;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20638073	20638231	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001687:16;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20638232	20638346	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=intron:HG002_chrY_T0001687:16;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20638347	20638466	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=exon:HG002_chrY_T0001687:17;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20638347	20638466	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001687:17;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20638467	20638884	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=intron:HG002_chrY_T0001687:17;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20638885	20639043	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=exon:HG002_chrY_T0001687:18;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20638885	20639043	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001687:18;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20639044	20641652	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=intron:HG002_chrY_T0001687:18;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20641653	20641798	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=exon:HG002_chrY_T0001687:19;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20641653	20641798	.	-	2	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001687:19;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20641799	20641921	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=intron:HG002_chrY_T0001687:19;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20641922	20642051	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=exon:HG002_chrY_T0001687:20;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20641922	20642051	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001687:20;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20642052	20645828	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=intron:HG002_chrY_T0001687:20;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20645829	20645963	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=exon:HG002_chrY_T0001687:21;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20645829	20645963	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001687:21;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20645964	20647618	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=intron:HG002_chrY_T0001687:21;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20647619	20647789	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=exon:HG002_chrY_T0001687:22;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20647619	20647789	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001687:22;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20647790	20648035	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=intron:HG002_chrY_T0001687:22;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20648036	20648158	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=exon:HG002_chrY_T0001687:23;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20648036	20648158	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001687:23;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20648159	20649462	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=intron:HG002_chrY_T0001687:23;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20649463	20649540	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=exon:HG002_chrY_T0001687:24;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20649463	20649540	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001687:24;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20649541	20650685	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=intron:HG002_chrY_T0001687:24;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20650686	20650854	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=exon:HG002_chrY_T0001687:25;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20650686	20650835	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001687:25;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	20650833	20650835	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=start_codon:HG002_chrY_T0001687;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20650855	20650971	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=intron:HG002_chrY_T0001687:25;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20650972	20651027	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG002_chrY_T0001687;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001687;transcript_name=HG002_chrY_T0001687;gene_name=KDM5D;ID=exon:HG002_chrY_T0001687:26;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20610166	20622996	1000	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG002_chrY_T0001688;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_G0000542;transcript_name=HG002_chrY_T0001688;gene_name=KDM5D;ID=HG002_chrY_T0001688;Name=KDM5D
HG002_chrY	CAT	exon	20610166	20612646	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG002_chrY_T0001688;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001688;transcript_name=HG002_chrY_T0001688;gene_name=KDM5D;ID=exon:HG002_chrY_T0001688:0;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20612647	20612741	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG002_chrY_T0001688;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001688;transcript_name=HG002_chrY_T0001688;gene_name=KDM5D;ID=intron:HG002_chrY_T0001688:0;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20612742	20613164	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG002_chrY_T0001688;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001688;transcript_name=HG002_chrY_T0001688;gene_name=KDM5D;ID=exon:HG002_chrY_T0001688:1;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20613165	20613447	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG002_chrY_T0001688;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001688;transcript_name=HG002_chrY_T0001688;gene_name=KDM5D;ID=intron:HG002_chrY_T0001688:1;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20613448	20614047	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG002_chrY_T0001688;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001688;transcript_name=HG002_chrY_T0001688;gene_name=KDM5D;ID=exon:HG002_chrY_T0001688:2;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20614048	20614234	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG002_chrY_T0001688;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001688;transcript_name=HG002_chrY_T0001688;gene_name=KDM5D;ID=intron:HG002_chrY_T0001688:2;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20614235	20614372	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG002_chrY_T0001688;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001688;transcript_name=HG002_chrY_T0001688;gene_name=KDM5D;ID=exon:HG002_chrY_T0001688:3;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20614373	20614544	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG002_chrY_T0001688;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001688;transcript_name=HG002_chrY_T0001688;gene_name=KDM5D;ID=intron:HG002_chrY_T0001688:3;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20614545	20614724	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG002_chrY_T0001688;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001688;transcript_name=HG002_chrY_T0001688;gene_name=KDM5D;ID=exon:HG002_chrY_T0001688:4;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20614725	20615175	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG002_chrY_T0001688;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001688;transcript_name=HG002_chrY_T0001688;gene_name=KDM5D;ID=intron:HG002_chrY_T0001688:4;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20615176	20615314	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG002_chrY_T0001688;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001688;transcript_name=HG002_chrY_T0001688;gene_name=KDM5D;ID=exon:HG002_chrY_T0001688:5;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20615315	20615751	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG002_chrY_T0001688;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001688;transcript_name=HG002_chrY_T0001688;gene_name=KDM5D;ID=intron:HG002_chrY_T0001688:5;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20615752	20616561	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG002_chrY_T0001688;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001688;transcript_name=HG002_chrY_T0001688;gene_name=KDM5D;ID=exon:HG002_chrY_T0001688:6;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20616562	20616676	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG002_chrY_T0001688;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001688;transcript_name=HG002_chrY_T0001688;gene_name=KDM5D;ID=intron:HG002_chrY_T0001688:6;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20616677	20616773	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG002_chrY_T0001688;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001688;transcript_name=HG002_chrY_T0001688;gene_name=KDM5D;ID=exon:HG002_chrY_T0001688:7;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20616774	20621884	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG002_chrY_T0001688;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001688;transcript_name=HG002_chrY_T0001688;gene_name=KDM5D;ID=intron:HG002_chrY_T0001688:7;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20621885	20622040	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG002_chrY_T0001688;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001688;transcript_name=HG002_chrY_T0001688;gene_name=KDM5D;ID=exon:HG002_chrY_T0001688:8;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20622041	20622123	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG002_chrY_T0001688;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001688;transcript_name=HG002_chrY_T0001688;gene_name=KDM5D;ID=intron:HG002_chrY_T0001688:8;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20622124	20622305	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG002_chrY_T0001688;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001688;transcript_name=HG002_chrY_T0001688;gene_name=KDM5D;ID=exon:HG002_chrY_T0001688:9;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20622306	20622579	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG002_chrY_T0001688;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001688;transcript_name=HG002_chrY_T0001688;gene_name=KDM5D;ID=intron:HG002_chrY_T0001688:9;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20622580	20622774	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG002_chrY_T0001688;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001688;transcript_name=HG002_chrY_T0001688;gene_name=KDM5D;ID=exon:HG002_chrY_T0001688:10;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20622775	20622896	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG002_chrY_T0001688;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001688;transcript_name=HG002_chrY_T0001688;gene_name=KDM5D;ID=intron:HG002_chrY_T0001688:10;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20622897	20622996	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG002_chrY_T0001688;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001688;transcript_name=HG002_chrY_T0001688;gene_name=KDM5D;ID=exon:HG002_chrY_T0001688:11;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20611718	20651240	100	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_G0000542;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=HG002_chrY_T0001689;Name=KDM5D
HG002_chrY	CAT	exon	20611718	20612646	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=exon:HG002_chrY_T0001689:0;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20612296	20612646	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001689:0;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	20612296	20612298	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=stop_codon:HG002_chrY_T0001689;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20612647	20612741	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=intron:HG002_chrY_T0001689:0;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20612742	20612941	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=exon:HG002_chrY_T0001689:1;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20612742	20612941	.	-	2	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001689:1;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20612942	20613094	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=intron:HG002_chrY_T0001689:1;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20613095	20613164	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=exon:HG002_chrY_T0001689:2;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20613095	20613164	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001689:2;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20613165	20613447	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=intron:HG002_chrY_T0001689:2;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20613448	20614047	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=exon:HG002_chrY_T0001689:3;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20613448	20614047	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001689:3;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20614048	20614234	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=intron:HG002_chrY_T0001689:3;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20614235	20614372	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=exon:HG002_chrY_T0001689:4;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20614235	20614372	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001689:4;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20614373	20614544	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=intron:HG002_chrY_T0001689:4;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20614545	20614724	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=exon:HG002_chrY_T0001689:5;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20614545	20614724	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001689:5;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20614725	20615175	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=intron:HG002_chrY_T0001689:5;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20615176	20615314	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=exon:HG002_chrY_T0001689:6;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20615176	20615314	.	-	1	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001689:6;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20615315	20615751	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=intron:HG002_chrY_T0001689:6;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20615752	20616110	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=exon:HG002_chrY_T0001689:7;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20615752	20616110	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001689:7;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20616111	20616676	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=intron:HG002_chrY_T0001689:7;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20616677	20616773	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=exon:HG002_chrY_T0001689:8;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20616677	20616773	.	-	1	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001689:8;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20616774	20621652	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=intron:HG002_chrY_T0001689:8;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20621653	20621800	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=exon:HG002_chrY_T0001689:9;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20621653	20621800	.	-	2	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001689:9;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20621801	20621915	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=intron:HG002_chrY_T0001689:9;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20621916	20622040	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=exon:HG002_chrY_T0001689:10;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20621916	20622040	.	-	1	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001689:10;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20622041	20622123	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=intron:HG002_chrY_T0001689:10;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20622124	20622305	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=exon:HG002_chrY_T0001689:11;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20622124	20622305	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001689:11;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20622306	20622579	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=intron:HG002_chrY_T0001689:11;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20622580	20622774	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=exon:HG002_chrY_T0001689:12;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20622580	20622774	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001689:12;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20622775	20622896	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=intron:HG002_chrY_T0001689:12;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20622897	20623016	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=exon:HG002_chrY_T0001689:13;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20622897	20623016	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001689:13;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20623017	20627172	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=intron:HG002_chrY_T0001689:13;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20627173	20627335	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=exon:HG002_chrY_T0001689:14;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20627173	20627335	.	-	1	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001689:14;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20627336	20627430	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=intron:HG002_chrY_T0001689:14;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20627431	20627612	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=exon:HG002_chrY_T0001689:15;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20627431	20627612	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001689:15;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20627613	20629641	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=intron:HG002_chrY_T0001689:15;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20629642	20629734	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=exon:HG002_chrY_T0001689:16;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20629642	20629734	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001689:16;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20629735	20638072	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=intron:HG002_chrY_T0001689:16;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20638073	20638231	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=exon:HG002_chrY_T0001689:17;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20638073	20638231	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001689:17;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20638232	20638346	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=intron:HG002_chrY_T0001689:17;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20638347	20638466	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=exon:HG002_chrY_T0001689:18;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20638347	20638466	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001689:18;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20638467	20638884	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=intron:HG002_chrY_T0001689:18;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20638885	20639043	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=exon:HG002_chrY_T0001689:19;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20638885	20639043	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001689:19;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20639044	20641652	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=intron:HG002_chrY_T0001689:19;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20641653	20641798	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=exon:HG002_chrY_T0001689:20;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20641653	20641798	.	-	2	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001689:20;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20641799	20641921	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=intron:HG002_chrY_T0001689:20;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20641922	20642051	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=exon:HG002_chrY_T0001689:21;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20641922	20642051	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001689:21;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20642052	20645828	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=intron:HG002_chrY_T0001689:21;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20645829	20645963	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=exon:HG002_chrY_T0001689:22;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20645829	20645963	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001689:22;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20645964	20647618	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=intron:HG002_chrY_T0001689:22;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20647619	20647789	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=exon:HG002_chrY_T0001689:23;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20647619	20647789	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001689:23;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20647790	20648035	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=intron:HG002_chrY_T0001689:23;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20648036	20648158	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=exon:HG002_chrY_T0001689:24;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20648036	20648158	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001689:24;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20648159	20649462	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=intron:HG002_chrY_T0001689:24;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20649463	20649540	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=exon:HG002_chrY_T0001689:25;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20649463	20649540	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001689:25;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20649541	20650685	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=intron:HG002_chrY_T0001689:25;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20650686	20650854	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=exon:HG002_chrY_T0001689:26;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20650686	20650835	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001689:26;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	20650833	20650835	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=start_codon:HG002_chrY_T0001689;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20650855	20650971	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=intron:HG002_chrY_T0001689:26;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20650972	20651240	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG002_chrY_T0001689;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001689;transcript_name=HG002_chrY_T0001689;gene_name=KDM5D;ID=exon:HG002_chrY_T0001689:27;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20611721	20651062	100	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_G0000542;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=HG002_chrY_T0001690;Name=KDM5D
HG002_chrY	CAT	exon	20611721	20612646	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=exon:HG002_chrY_T0001690:0;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20612296	20612646	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001690:0;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	20612296	20612298	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=stop_codon:HG002_chrY_T0001690;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20612647	20612741	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=intron:HG002_chrY_T0001690:0;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20612742	20612941	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=exon:HG002_chrY_T0001690:1;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20612742	20612941	.	-	2	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001690:1;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20612942	20613094	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=intron:HG002_chrY_T0001690:1;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20613095	20613164	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=exon:HG002_chrY_T0001690:2;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20613095	20613164	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001690:2;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20613165	20613447	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=intron:HG002_chrY_T0001690:2;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20613448	20614047	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=exon:HG002_chrY_T0001690:3;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20613448	20614047	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001690:3;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20614048	20614234	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=intron:HG002_chrY_T0001690:3;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20614235	20614372	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=exon:HG002_chrY_T0001690:4;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20614235	20614372	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001690:4;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20614373	20614544	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=intron:HG002_chrY_T0001690:4;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20614545	20614724	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=exon:HG002_chrY_T0001690:5;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20614545	20614724	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001690:5;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20614725	20615175	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=intron:HG002_chrY_T0001690:5;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20615176	20615314	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=exon:HG002_chrY_T0001690:6;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20615176	20615314	.	-	1	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001690:6;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20615315	20615751	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=intron:HG002_chrY_T0001690:6;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20615752	20616110	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=exon:HG002_chrY_T0001690:7;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20615752	20616110	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001690:7;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20616111	20616676	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=intron:HG002_chrY_T0001690:7;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20616677	20616773	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=exon:HG002_chrY_T0001690:8;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20616677	20616773	.	-	1	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001690:8;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20616774	20621652	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=intron:HG002_chrY_T0001690:8;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20621653	20621800	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=exon:HG002_chrY_T0001690:9;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20621653	20621800	.	-	2	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001690:9;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20621801	20621915	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=intron:HG002_chrY_T0001690:9;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20621916	20622040	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=exon:HG002_chrY_T0001690:10;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20621916	20622040	.	-	1	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001690:10;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20622041	20622123	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=intron:HG002_chrY_T0001690:10;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20622124	20622305	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=exon:HG002_chrY_T0001690:11;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20622124	20622305	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001690:11;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20622306	20622579	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=intron:HG002_chrY_T0001690:11;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20622580	20622774	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=exon:HG002_chrY_T0001690:12;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20622580	20622774	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001690:12;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20622775	20622896	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=intron:HG002_chrY_T0001690:12;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20622897	20623016	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=exon:HG002_chrY_T0001690:13;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20622897	20623016	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001690:13;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20623017	20627172	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=intron:HG002_chrY_T0001690:13;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20627173	20627335	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=exon:HG002_chrY_T0001690:14;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20627173	20627335	.	-	1	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001690:14;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20627336	20627430	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=intron:HG002_chrY_T0001690:14;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20627431	20627612	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=exon:HG002_chrY_T0001690:15;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20627431	20627612	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001690:15;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20627613	20638072	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=intron:HG002_chrY_T0001690:15;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20638073	20638231	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=exon:HG002_chrY_T0001690:16;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20638073	20638231	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001690:16;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20638232	20638346	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=intron:HG002_chrY_T0001690:16;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20638347	20638466	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=exon:HG002_chrY_T0001690:17;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20638347	20638466	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001690:17;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20638467	20638884	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=intron:HG002_chrY_T0001690:17;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20638885	20639043	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=exon:HG002_chrY_T0001690:18;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20638885	20639043	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001690:18;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20639044	20641652	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=intron:HG002_chrY_T0001690:18;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20641653	20641798	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=exon:HG002_chrY_T0001690:19;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20641653	20641798	.	-	2	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001690:19;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20641799	20641921	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=intron:HG002_chrY_T0001690:19;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20641922	20642051	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=exon:HG002_chrY_T0001690:20;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20641922	20642051	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001690:20;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20642052	20645828	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=intron:HG002_chrY_T0001690:20;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20645829	20645963	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=exon:HG002_chrY_T0001690:21;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20645829	20645963	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001690:21;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20645964	20648035	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=intron:HG002_chrY_T0001690:21;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20648036	20648158	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=exon:HG002_chrY_T0001690:22;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20648036	20648158	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001690:22;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20648159	20649462	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=intron:HG002_chrY_T0001690:22;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20649463	20649540	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=exon:HG002_chrY_T0001690:23;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20649463	20649540	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001690:23;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20649541	20650685	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=intron:HG002_chrY_T0001690:23;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20650686	20650854	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=exon:HG002_chrY_T0001690:24;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20650686	20650835	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001690:24;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	20650833	20650835	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=start_codon:HG002_chrY_T0001690;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20650855	20650971	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=intron:HG002_chrY_T0001690:24;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20650972	20651062	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG002_chrY_T0001690;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001690;transcript_name=HG002_chrY_T0001690;gene_name=KDM5D;ID=exon:HG002_chrY_T0001690:25;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20611726	20628768	1000	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG002_chrY_T0001691;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_G0000542;transcript_name=HG002_chrY_T0001691;gene_name=KDM5D;ID=HG002_chrY_T0001691;Name=KDM5D
HG002_chrY	CAT	exon	20611726	20612646	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG002_chrY_T0001691;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001691;transcript_name=HG002_chrY_T0001691;gene_name=KDM5D;ID=exon:HG002_chrY_T0001691:0;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20612647	20612741	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG002_chrY_T0001691;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001691;transcript_name=HG002_chrY_T0001691;gene_name=KDM5D;ID=intron:HG002_chrY_T0001691:0;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20612742	20613164	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG002_chrY_T0001691;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001691;transcript_name=HG002_chrY_T0001691;gene_name=KDM5D;ID=exon:HG002_chrY_T0001691:1;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20613165	20613447	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG002_chrY_T0001691;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001691;transcript_name=HG002_chrY_T0001691;gene_name=KDM5D;ID=intron:HG002_chrY_T0001691:1;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20613448	20614047	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG002_chrY_T0001691;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001691;transcript_name=HG002_chrY_T0001691;gene_name=KDM5D;ID=exon:HG002_chrY_T0001691:2;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20614048	20614234	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG002_chrY_T0001691;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001691;transcript_name=HG002_chrY_T0001691;gene_name=KDM5D;ID=intron:HG002_chrY_T0001691:2;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20614235	20614372	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG002_chrY_T0001691;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001691;transcript_name=HG002_chrY_T0001691;gene_name=KDM5D;ID=exon:HG002_chrY_T0001691:3;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20614373	20614544	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG002_chrY_T0001691;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001691;transcript_name=HG002_chrY_T0001691;gene_name=KDM5D;ID=intron:HG002_chrY_T0001691:3;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20614545	20614724	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG002_chrY_T0001691;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001691;transcript_name=HG002_chrY_T0001691;gene_name=KDM5D;ID=exon:HG002_chrY_T0001691:4;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20614725	20615175	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG002_chrY_T0001691;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001691;transcript_name=HG002_chrY_T0001691;gene_name=KDM5D;ID=intron:HG002_chrY_T0001691:4;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20615176	20615314	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG002_chrY_T0001691;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001691;transcript_name=HG002_chrY_T0001691;gene_name=KDM5D;ID=exon:HG002_chrY_T0001691:5;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20615315	20615751	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG002_chrY_T0001691;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001691;transcript_name=HG002_chrY_T0001691;gene_name=KDM5D;ID=intron:HG002_chrY_T0001691:5;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20615752	20616110	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG002_chrY_T0001691;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001691;transcript_name=HG002_chrY_T0001691;gene_name=KDM5D;ID=exon:HG002_chrY_T0001691:6;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20616111	20616676	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG002_chrY_T0001691;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001691;transcript_name=HG002_chrY_T0001691;gene_name=KDM5D;ID=intron:HG002_chrY_T0001691:6;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20616677	20616773	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG002_chrY_T0001691;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001691;transcript_name=HG002_chrY_T0001691;gene_name=KDM5D;ID=exon:HG002_chrY_T0001691:7;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20616774	20621652	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG002_chrY_T0001691;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001691;transcript_name=HG002_chrY_T0001691;gene_name=KDM5D;ID=intron:HG002_chrY_T0001691:7;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20621653	20621800	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG002_chrY_T0001691;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001691;transcript_name=HG002_chrY_T0001691;gene_name=KDM5D;ID=exon:HG002_chrY_T0001691:8;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20621801	20621915	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG002_chrY_T0001691;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001691;transcript_name=HG002_chrY_T0001691;gene_name=KDM5D;ID=intron:HG002_chrY_T0001691:8;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20621916	20622040	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG002_chrY_T0001691;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001691;transcript_name=HG002_chrY_T0001691;gene_name=KDM5D;ID=exon:HG002_chrY_T0001691:9;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20622041	20622123	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG002_chrY_T0001691;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001691;transcript_name=HG002_chrY_T0001691;gene_name=KDM5D;ID=intron:HG002_chrY_T0001691:9;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20622124	20622412	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG002_chrY_T0001691;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001691;transcript_name=HG002_chrY_T0001691;gene_name=KDM5D;ID=exon:HG002_chrY_T0001691:10;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20622413	20622579	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG002_chrY_T0001691;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001691;transcript_name=HG002_chrY_T0001691;gene_name=KDM5D;ID=intron:HG002_chrY_T0001691:10;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20622580	20622774	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG002_chrY_T0001691;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001691;transcript_name=HG002_chrY_T0001691;gene_name=KDM5D;ID=exon:HG002_chrY_T0001691:11;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20622775	20622896	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG002_chrY_T0001691;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001691;transcript_name=HG002_chrY_T0001691;gene_name=KDM5D;ID=intron:HG002_chrY_T0001691:11;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20622897	20623016	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG002_chrY_T0001691;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001691;transcript_name=HG002_chrY_T0001691;gene_name=KDM5D;ID=exon:HG002_chrY_T0001691:12;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20623017	20627172	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG002_chrY_T0001691;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001691;transcript_name=HG002_chrY_T0001691;gene_name=KDM5D;ID=intron:HG002_chrY_T0001691:12;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20627173	20627335	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG002_chrY_T0001691;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001691;transcript_name=HG002_chrY_T0001691;gene_name=KDM5D;ID=exon:HG002_chrY_T0001691:13;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20627336	20627430	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG002_chrY_T0001691;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001691;transcript_name=HG002_chrY_T0001691;gene_name=KDM5D;ID=intron:HG002_chrY_T0001691:13;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20627431	20628768	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG002_chrY_T0001691;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001691;transcript_name=HG002_chrY_T0001691;gene_name=KDM5D;ID=exon:HG002_chrY_T0001691:14;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20612364	20651224	100	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_G0000542;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=HG002_chrY_T0001692;Name=KDM5D
HG002_chrY	CAT	exon	20612364	20612646	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=exon:HG002_chrY_T0001692:0;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20612364	20612646	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001692:0;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20612647	20612741	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=intron:HG002_chrY_T0001692:0;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20612742	20612941	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=exon:HG002_chrY_T0001692:1;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20612742	20612941	.	-	2	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001692:1;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20612942	20613094	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=intron:HG002_chrY_T0001692:1;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20613095	20613164	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=exon:HG002_chrY_T0001692:2;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20613095	20613164	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001692:2;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20613165	20613447	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=intron:HG002_chrY_T0001692:2;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20613448	20614047	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=exon:HG002_chrY_T0001692:3;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20613448	20614047	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001692:3;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20614048	20614234	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=intron:HG002_chrY_T0001692:3;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20614235	20614372	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=exon:HG002_chrY_T0001692:4;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20614235	20614372	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001692:4;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20614373	20614544	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=intron:HG002_chrY_T0001692:4;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20614545	20614724	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=exon:HG002_chrY_T0001692:5;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20614545	20614724	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001692:5;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20614725	20615175	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=intron:HG002_chrY_T0001692:5;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20615176	20615314	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=exon:HG002_chrY_T0001692:6;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20615176	20615314	.	-	1	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001692:6;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20615315	20615751	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=intron:HG002_chrY_T0001692:6;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20615752	20616110	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=exon:HG002_chrY_T0001692:7;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20615752	20616110	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001692:7;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20616111	20616676	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=intron:HG002_chrY_T0001692:7;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20616677	20616773	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=exon:HG002_chrY_T0001692:8;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20616677	20616773	.	-	1	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001692:8;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20616774	20621652	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=intron:HG002_chrY_T0001692:8;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20621653	20621800	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=exon:HG002_chrY_T0001692:9;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20621653	20621800	.	-	2	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001692:9;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20621801	20621915	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=intron:HG002_chrY_T0001692:9;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20621916	20622040	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=exon:HG002_chrY_T0001692:10;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20621916	20622040	.	-	1	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001692:10;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20622041	20622123	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=intron:HG002_chrY_T0001692:10;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20622124	20622305	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=exon:HG002_chrY_T0001692:11;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20622124	20622305	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001692:11;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20622306	20622579	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=intron:HG002_chrY_T0001692:11;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20622580	20622774	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=exon:HG002_chrY_T0001692:12;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20622580	20622774	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001692:12;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20622775	20622896	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=intron:HG002_chrY_T0001692:12;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20622897	20623016	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=exon:HG002_chrY_T0001692:13;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20622897	20623016	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001692:13;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20623017	20627172	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=intron:HG002_chrY_T0001692:13;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20627173	20627335	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=exon:HG002_chrY_T0001692:14;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20627173	20627335	.	-	1	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001692:14;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20627336	20627430	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=intron:HG002_chrY_T0001692:14;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20627431	20627612	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=exon:HG002_chrY_T0001692:15;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20627431	20627612	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001692:15;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20627613	20638072	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=intron:HG002_chrY_T0001692:15;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20638073	20638231	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=exon:HG002_chrY_T0001692:16;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20638073	20638231	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001692:16;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20638232	20638346	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=intron:HG002_chrY_T0001692:16;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20638347	20638466	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=exon:HG002_chrY_T0001692:17;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20638347	20638466	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001692:17;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20638467	20638884	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=intron:HG002_chrY_T0001692:17;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20638885	20639043	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=exon:HG002_chrY_T0001692:18;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20638885	20639043	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001692:18;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20639044	20641652	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=intron:HG002_chrY_T0001692:18;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20641653	20641798	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=exon:HG002_chrY_T0001692:19;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20641653	20641798	.	-	2	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001692:19;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20641799	20641921	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=intron:HG002_chrY_T0001692:19;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20641922	20642051	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=exon:HG002_chrY_T0001692:20;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20641922	20642051	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001692:20;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20642052	20645828	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=intron:HG002_chrY_T0001692:20;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20645829	20645963	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=exon:HG002_chrY_T0001692:21;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20645829	20645963	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001692:21;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20645964	20647618	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=intron:HG002_chrY_T0001692:21;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20647619	20647789	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=exon:HG002_chrY_T0001692:22;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20647619	20647789	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001692:22;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20647790	20649462	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=intron:HG002_chrY_T0001692:22;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20649463	20649540	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=exon:HG002_chrY_T0001692:23;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20649463	20649540	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001692:23;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20649541	20650685	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=intron:HG002_chrY_T0001692:23;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20650686	20650854	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=exon:HG002_chrY_T0001692:24;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20650686	20650835	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001692:24;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	20650833	20650835	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=start_codon:HG002_chrY_T0001692;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20650855	20650971	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=intron:HG002_chrY_T0001692:24;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20650972	20651224	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG002_chrY_T0001692;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001692;transcript_name=HG002_chrY_T0001692;gene_name=KDM5D;ID=exon:HG002_chrY_T0001692:25;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20613483	20615250	100	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG002_chrY_T0001693;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_G0000542;transcript_name=HG002_chrY_T0001693;gene_name=KDM5D;ID=HG002_chrY_T0001693;Name=KDM5D
HG002_chrY	CAT	exon	20613483	20614047	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG002_chrY_T0001693;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001693;transcript_name=HG002_chrY_T0001693;gene_name=KDM5D;ID=exon:HG002_chrY_T0001693:0;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20613483	20614047	.	-	0	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG002_chrY_T0001693;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001693;transcript_name=HG002_chrY_T0001693;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001693:0;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20614048	20614234	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG002_chrY_T0001693;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001693;transcript_name=HG002_chrY_T0001693;gene_name=KDM5D;ID=intron:HG002_chrY_T0001693:0;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20614235	20614372	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG002_chrY_T0001693;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001693;transcript_name=HG002_chrY_T0001693;gene_name=KDM5D;ID=exon:HG002_chrY_T0001693:1;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20614235	20614372	.	-	0	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG002_chrY_T0001693;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001693;transcript_name=HG002_chrY_T0001693;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001693:1;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20614373	20614622	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG002_chrY_T0001693;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001693;transcript_name=HG002_chrY_T0001693;gene_name=KDM5D;ID=intron:HG002_chrY_T0001693:1;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20614623	20614724	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG002_chrY_T0001693;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001693;transcript_name=HG002_chrY_T0001693;gene_name=KDM5D;ID=exon:HG002_chrY_T0001693:2;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20614623	20614724	.	-	0	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG002_chrY_T0001693;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001693;transcript_name=HG002_chrY_T0001693;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001693:2;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20614725	20615175	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG002_chrY_T0001693;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001693;transcript_name=HG002_chrY_T0001693;gene_name=KDM5D;ID=intron:HG002_chrY_T0001693:2;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20615176	20615250	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG002_chrY_T0001693;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001693;transcript_name=HG002_chrY_T0001693;gene_name=KDM5D;ID=exon:HG002_chrY_T0001693:3;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20615176	20615250	.	-	0	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG002_chrY_T0001693;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001693;transcript_name=HG002_chrY_T0001693;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001693:3;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20616001	20616907	1000	-	.	source_transcript=ENST00000485154.1;source_transcript_name=KDM5D-208;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000485154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485154.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000485154.1,ENST00000485154.1;transcript_id=HG002_chrY_T0001694;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_G0000542;transcript_name=HG002_chrY_T0001694;gene_name=KDM5D;ID=HG002_chrY_T0001694;Name=KDM5D
HG002_chrY	CAT	exon	20616001	20616561	.	-	.	source_transcript=ENST00000485154.1;source_transcript_name=KDM5D-208;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000485154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000485154.1,ENST00000485154.1;transcript_id=HG002_chrY_T0001694;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001694;transcript_name=HG002_chrY_T0001694;gene_name=KDM5D;ID=exon:HG002_chrY_T0001694:0;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20616562	20616676	.	-	.	source_transcript=ENST00000485154.1;source_transcript_name=KDM5D-208;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000485154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000485154.1,ENST00000485154.1;transcript_id=HG002_chrY_T0001694;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001694;transcript_name=HG002_chrY_T0001694;gene_name=KDM5D;ID=intron:HG002_chrY_T0001694:0;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20616677	20616907	.	-	.	source_transcript=ENST00000485154.1;source_transcript_name=KDM5D-208;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000485154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000485154.1,ENST00000485154.1;transcript_id=HG002_chrY_T0001694;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001694;transcript_name=HG002_chrY_T0001694;gene_name=KDM5D;ID=exon:HG002_chrY_T0001694:1;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20621437	20622649	1000	-	.	source_transcript=ENST00000478891.1;source_transcript_name=KDM5D-207;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000478891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478891.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000478891.1,ENST00000478891.1;transcript_id=HG002_chrY_T0001695;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_G0000542;transcript_name=HG002_chrY_T0001695;gene_name=KDM5D;ID=HG002_chrY_T0001695;Name=KDM5D
HG002_chrY	CAT	exon	20621437	20622040	.	-	.	source_transcript=ENST00000478891.1;source_transcript_name=KDM5D-207;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000478891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000478891.1,ENST00000478891.1;transcript_id=HG002_chrY_T0001695;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001695;transcript_name=HG002_chrY_T0001695;gene_name=KDM5D;ID=exon:HG002_chrY_T0001695:0;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20622041	20622123	.	-	.	source_transcript=ENST00000478891.1;source_transcript_name=KDM5D-207;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000478891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000478891.1,ENST00000478891.1;transcript_id=HG002_chrY_T0001695;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001695;transcript_name=HG002_chrY_T0001695;gene_name=KDM5D;ID=intron:HG002_chrY_T0001695:0;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20622124	20622305	.	-	.	source_transcript=ENST00000478891.1;source_transcript_name=KDM5D-207;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000478891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000478891.1,ENST00000478891.1;transcript_id=HG002_chrY_T0001695;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001695;transcript_name=HG002_chrY_T0001695;gene_name=KDM5D;ID=exon:HG002_chrY_T0001695:1;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20622306	20622579	.	-	.	source_transcript=ENST00000478891.1;source_transcript_name=KDM5D-207;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000478891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000478891.1,ENST00000478891.1;transcript_id=HG002_chrY_T0001695;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001695;transcript_name=HG002_chrY_T0001695;gene_name=KDM5D;ID=intron:HG002_chrY_T0001695:1;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20622580	20622649	.	-	.	source_transcript=ENST00000478891.1;source_transcript_name=KDM5D-207;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000478891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000478891.1,ENST00000478891.1;transcript_id=HG002_chrY_T0001695;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001695;transcript_name=HG002_chrY_T0001695;gene_name=KDM5D;ID=exon:HG002_chrY_T0001695:2;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20627573	20651012	100	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_G0000542;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=HG002_chrY_T0001696;Name=KDM5D
HG002_chrY	CAT	exon	20627573	20627612	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001696;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=exon:HG002_chrY_T0001696:0;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20627573	20627612	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001696;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001696:0;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20627613	20638072	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001696;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=intron:HG002_chrY_T0001696:0;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20638073	20638231	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001696;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=exon:HG002_chrY_T0001696:1;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20638073	20638231	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001696;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001696:1;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20638232	20638346	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001696;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=intron:HG002_chrY_T0001696:1;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20638347	20638466	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001696;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=exon:HG002_chrY_T0001696:2;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20638347	20638466	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001696;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001696:2;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20638467	20638884	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001696;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=intron:HG002_chrY_T0001696:2;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20638885	20639043	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001696;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=exon:HG002_chrY_T0001696:3;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20638885	20639043	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001696;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001696:3;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20639044	20641652	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001696;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=intron:HG002_chrY_T0001696:3;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20641653	20641798	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001696;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=exon:HG002_chrY_T0001696:4;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20641653	20641798	.	-	2	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001696;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001696:4;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20641799	20641921	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001696;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=intron:HG002_chrY_T0001696:4;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20641922	20642051	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001696;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=exon:HG002_chrY_T0001696:5;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20641922	20642051	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001696;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001696:5;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20642052	20647618	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001696;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=intron:HG002_chrY_T0001696:5;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20647619	20647789	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001696;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=exon:HG002_chrY_T0001696:6;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20647619	20647789	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001696;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001696:6;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20647790	20648035	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001696;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=intron:HG002_chrY_T0001696:6;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20648036	20648158	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001696;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=exon:HG002_chrY_T0001696:7;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20648036	20648158	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001696;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001696:7;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20648159	20649462	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001696;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=intron:HG002_chrY_T0001696:7;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20649463	20649540	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001696;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=exon:HG002_chrY_T0001696:8;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20649463	20649540	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001696;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001696:8;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20649541	20650685	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001696;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=intron:HG002_chrY_T0001696:8;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20650686	20650854	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001696;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=exon:HG002_chrY_T0001696:9;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	20650686	20650835	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001696;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=CDS:HG002_chrY_T0001696:9;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	20650833	20650835	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001696;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=start_codon:HG002_chrY_T0001696;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20650855	20650971	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001696;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=intron:HG002_chrY_T0001696:9;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20650972	20651012	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG002_chrY_T0001696;gene_id=HG002_chrY_G0000542;Parent=HG002_chrY_T0001696;transcript_name=HG002_chrY_T0001696;gene_name=KDM5D;ID=exon:HG002_chrY_T0001696:10;Name=KDM5D;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	20651057	20666279	.	+	.	source_gene_common_name=ENSG00000288049;source_gene=ENSG00000288049.2;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;gene_id=HG002_chrY_G0000543;gene_biotype=lncRNA;gene_name=ENSG00000288049;gene_sources=liftoff;ID=HG002_chrY_G0000543;Name=ENSG00000288049
HG002_chrY	CAT	transcript	20651057	20663643	1000	+	.	source_transcript=ENST00000653234.1;source_transcript_name=ENST00000653234;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653234.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653234.1;transcript_score=299.97;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;transcript_id=HG002_chrY_T0001697;gene_id=HG002_chrY_G0000543;Parent=HG002_chrY_G0000543;transcript_name=HG002_chrY_T0001697;gene_name=ENSG00000288049;ID=HG002_chrY_T0001697;Name=ENSG00000288049
HG002_chrY	CAT	exon	20651057	20652014	.	+	.	source_transcript=ENST00000653234.1;source_transcript_name=ENST00000653234;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653234.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653234.1;transcript_score=299.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;transcript_id=HG002_chrY_T0001697;gene_id=HG002_chrY_G0000543;Parent=HG002_chrY_T0001697;transcript_name=HG002_chrY_T0001697;gene_name=ENSG00000288049;ID=exon:HG002_chrY_T0001697:0;Name=ENSG00000288049;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20652015	20660926	.	+	.	source_transcript=ENST00000653234.1;source_transcript_name=ENST00000653234;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653234.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653234.1;transcript_score=299.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;transcript_id=HG002_chrY_T0001697;gene_id=HG002_chrY_G0000543;Parent=HG002_chrY_T0001697;transcript_name=HG002_chrY_T0001697;gene_name=ENSG00000288049;ID=intron:HG002_chrY_T0001697:0;Name=ENSG00000288049;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20660927	20661116	.	+	.	source_transcript=ENST00000653234.1;source_transcript_name=ENST00000653234;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653234.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653234.1;transcript_score=299.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;transcript_id=HG002_chrY_T0001697;gene_id=HG002_chrY_G0000543;Parent=HG002_chrY_T0001697;transcript_name=HG002_chrY_T0001697;gene_name=ENSG00000288049;ID=exon:HG002_chrY_T0001697:1;Name=ENSG00000288049;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20661117	20661505	.	+	.	source_transcript=ENST00000653234.1;source_transcript_name=ENST00000653234;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653234.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653234.1;transcript_score=299.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;transcript_id=HG002_chrY_T0001697;gene_id=HG002_chrY_G0000543;Parent=HG002_chrY_T0001697;transcript_name=HG002_chrY_T0001697;gene_name=ENSG00000288049;ID=intron:HG002_chrY_T0001697:1;Name=ENSG00000288049;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20661506	20663643	.	+	.	source_transcript=ENST00000653234.1;source_transcript_name=ENST00000653234;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653234.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653234.1;transcript_score=299.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;transcript_id=HG002_chrY_T0001697;gene_id=HG002_chrY_G0000543;Parent=HG002_chrY_T0001697;transcript_name=HG002_chrY_T0001697;gene_name=ENSG00000288049;ID=exon:HG002_chrY_T0001697:2;Name=ENSG00000288049;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20651253	20666279	1000	+	.	source_transcript=ENST00000652994.1;source_transcript_name=ENST00000652994;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652994.1;transcript_score=299.98199999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000652994.1,ENST00000652994.1;transcript_id=HG002_chrY_T0001698;gene_id=HG002_chrY_G0000543;Parent=HG002_chrY_G0000543;transcript_name=HG002_chrY_T0001698;gene_name=ENSG00000288049;ID=HG002_chrY_T0001698;Name=ENSG00000288049
HG002_chrY	CAT	exon	20651253	20652014	.	+	.	source_transcript=ENST00000652994.1;source_transcript_name=ENST00000652994;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652994.1;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000652994.1,ENST00000652994.1;transcript_id=HG002_chrY_T0001698;gene_id=HG002_chrY_G0000543;Parent=HG002_chrY_T0001698;transcript_name=HG002_chrY_T0001698;gene_name=ENSG00000288049;ID=exon:HG002_chrY_T0001698:0;Name=ENSG00000288049;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20652015	20661027	.	+	.	source_transcript=ENST00000652994.1;source_transcript_name=ENST00000652994;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652994.1;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000652994.1,ENST00000652994.1;transcript_id=HG002_chrY_T0001698;gene_id=HG002_chrY_G0000543;Parent=HG002_chrY_T0001698;transcript_name=HG002_chrY_T0001698;gene_name=ENSG00000288049;ID=intron:HG002_chrY_T0001698:0;Name=ENSG00000288049;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20661028	20661116	.	+	.	source_transcript=ENST00000652994.1;source_transcript_name=ENST00000652994;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652994.1;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000652994.1,ENST00000652994.1;transcript_id=HG002_chrY_T0001698;gene_id=HG002_chrY_G0000543;Parent=HG002_chrY_T0001698;transcript_name=HG002_chrY_T0001698;gene_name=ENSG00000288049;ID=exon:HG002_chrY_T0001698:1;Name=ENSG00000288049;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20661117	20661505	.	+	.	source_transcript=ENST00000652994.1;source_transcript_name=ENST00000652994;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652994.1;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000652994.1,ENST00000652994.1;transcript_id=HG002_chrY_T0001698;gene_id=HG002_chrY_G0000543;Parent=HG002_chrY_T0001698;transcript_name=HG002_chrY_T0001698;gene_name=ENSG00000288049;ID=intron:HG002_chrY_T0001698:1;Name=ENSG00000288049;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20661506	20666279	.	+	.	source_transcript=ENST00000652994.1;source_transcript_name=ENST00000652994;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652994.1;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000652994.1,ENST00000652994.1;transcript_id=HG002_chrY_T0001698;gene_id=HG002_chrY_G0000543;Parent=HG002_chrY_T0001698;transcript_name=HG002_chrY_T0001698;gene_name=ENSG00000288049;ID=exon:HG002_chrY_T0001698:2;Name=ENSG00000288049;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20651289	20660998	1000	+	.	source_transcript=ENST00000766639.1;source_transcript_name=ENST00000766639;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766639.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766639.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766639.1,ENST00000766639.1;transcript_id=HG002_chrY_T0001699;gene_id=HG002_chrY_G0000543;Parent=HG002_chrY_G0000543;transcript_name=HG002_chrY_T0001699;gene_name=ENSG00000288049;ID=HG002_chrY_T0001699;Name=ENSG00000288049
HG002_chrY	CAT	exon	20651289	20651499	.	+	.	source_transcript=ENST00000766639.1;source_transcript_name=ENST00000766639;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766639.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766639.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766639.1,ENST00000766639.1;transcript_id=HG002_chrY_T0001699;gene_id=HG002_chrY_G0000543;Parent=HG002_chrY_T0001699;transcript_name=HG002_chrY_T0001699;gene_name=ENSG00000288049;ID=exon:HG002_chrY_T0001699:0;Name=ENSG00000288049;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20651500	20660926	.	+	.	source_transcript=ENST00000766639.1;source_transcript_name=ENST00000766639;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766639.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766639.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766639.1,ENST00000766639.1;transcript_id=HG002_chrY_T0001699;gene_id=HG002_chrY_G0000543;Parent=HG002_chrY_T0001699;transcript_name=HG002_chrY_T0001699;gene_name=ENSG00000288049;ID=intron:HG002_chrY_T0001699:0;Name=ENSG00000288049;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20660927	20660998	.	+	.	source_transcript=ENST00000766639.1;source_transcript_name=ENST00000766639;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766639.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766639.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766639.1,ENST00000766639.1;transcript_id=HG002_chrY_T0001699;gene_id=HG002_chrY_G0000543;Parent=HG002_chrY_T0001699;transcript_name=HG002_chrY_T0001699;gene_name=ENSG00000288049;ID=exon:HG002_chrY_T0001699:1;Name=ENSG00000288049;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	20651302	20661596	1000	+	.	source_transcript=ENST00000766638.1;source_transcript_name=ENST00000766638;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766638.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766638.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766638.1,ENST00000766638.1;transcript_id=HG002_chrY_T0001700;gene_id=HG002_chrY_G0000543;Parent=HG002_chrY_G0000543;transcript_name=HG002_chrY_T0001700;gene_name=ENSG00000288049;ID=HG002_chrY_T0001700;Name=ENSG00000288049
HG002_chrY	CAT	exon	20651302	20651499	.	+	.	source_transcript=ENST00000766638.1;source_transcript_name=ENST00000766638;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766638.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766638.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766638.1,ENST00000766638.1;transcript_id=HG002_chrY_T0001700;gene_id=HG002_chrY_G0000543;Parent=HG002_chrY_T0001700;transcript_name=HG002_chrY_T0001700;gene_name=ENSG00000288049;ID=exon:HG002_chrY_T0001700:0;Name=ENSG00000288049;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20651500	20661027	.	+	.	source_transcript=ENST00000766638.1;source_transcript_name=ENST00000766638;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766638.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766638.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766638.1,ENST00000766638.1;transcript_id=HG002_chrY_T0001700;gene_id=HG002_chrY_G0000543;Parent=HG002_chrY_T0001700;transcript_name=HG002_chrY_T0001700;gene_name=ENSG00000288049;ID=intron:HG002_chrY_T0001700:0;Name=ENSG00000288049;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20661028	20661116	.	+	.	source_transcript=ENST00000766638.1;source_transcript_name=ENST00000766638;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766638.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766638.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766638.1,ENST00000766638.1;transcript_id=HG002_chrY_T0001700;gene_id=HG002_chrY_G0000543;Parent=HG002_chrY_T0001700;transcript_name=HG002_chrY_T0001700;gene_name=ENSG00000288049;ID=exon:HG002_chrY_T0001700:1;Name=ENSG00000288049;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20661117	20661505	.	+	.	source_transcript=ENST00000766638.1;source_transcript_name=ENST00000766638;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766638.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766638.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766638.1,ENST00000766638.1;transcript_id=HG002_chrY_T0001700;gene_id=HG002_chrY_G0000543;Parent=HG002_chrY_T0001700;transcript_name=HG002_chrY_T0001700;gene_name=ENSG00000288049;ID=intron:HG002_chrY_T0001700:1;Name=ENSG00000288049;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20661506	20661596	.	+	.	source_transcript=ENST00000766638.1;source_transcript_name=ENST00000766638;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766638.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766638.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766638.1,ENST00000766638.1;transcript_id=HG002_chrY_T0001700;gene_id=HG002_chrY_G0000543;Parent=HG002_chrY_T0001700;transcript_name=HG002_chrY_T0001700;gene_name=ENSG00000288049;ID=exon:HG002_chrY_T0001700:2;Name=ENSG00000288049;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	20775141	20790456	.	+	.	source_gene_common_name=ENSG00000300595;source_gene=ENSG00000300595.1;alternative_source_transcripts=ENST00000772853.1,ENST00000772853.1;gene_id=HG002_chrY_G0000544;gene_biotype=lncRNA;gene_name=ENSG00000300595;gene_sources=liftoff;ID=HG002_chrY_G0000544;Name=ENSG00000300595
HG002_chrY	CAT	transcript	20775141	20790456	1000	+	.	source_transcript=ENST00000772853.1;source_transcript_name=ENST00000772853;source_gene=ENSG00000300595.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300595.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772853.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300595;alternative_source_transcripts=ENST00000772853.1,ENST00000772853.1;transcript_id=HG002_chrY_T0001701;gene_id=HG002_chrY_G0000544;Parent=HG002_chrY_G0000544;transcript_name=HG002_chrY_T0001701;gene_name=ENSG00000300595;ID=HG002_chrY_T0001701;Name=ENSG00000300595
HG002_chrY	CAT	exon	20775141	20775402	.	+	.	source_transcript=ENST00000772853.1;source_transcript_name=ENST00000772853;source_gene=ENSG00000300595.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300595.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772853.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300595;alternative_source_transcripts=ENST00000772853.1,ENST00000772853.1;transcript_id=HG002_chrY_T0001701;gene_id=HG002_chrY_G0000544;Parent=HG002_chrY_T0001701;transcript_name=HG002_chrY_T0001701;gene_name=ENSG00000300595;ID=exon:HG002_chrY_T0001701:0;Name=ENSG00000300595;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20775403	20790022	.	+	.	source_transcript=ENST00000772853.1;source_transcript_name=ENST00000772853;source_gene=ENSG00000300595.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300595.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772853.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300595;alternative_source_transcripts=ENST00000772853.1,ENST00000772853.1;transcript_id=HG002_chrY_T0001701;gene_id=HG002_chrY_G0000544;Parent=HG002_chrY_T0001701;transcript_name=HG002_chrY_T0001701;gene_name=ENSG00000300595;ID=intron:HG002_chrY_T0001701:0;Name=ENSG00000300595;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20790023	20790456	.	+	.	source_transcript=ENST00000772853.1;source_transcript_name=ENST00000772853;source_gene=ENSG00000300595.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300595.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772853.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300595;alternative_source_transcripts=ENST00000772853.1,ENST00000772853.1;transcript_id=HG002_chrY_T0001701;gene_id=HG002_chrY_G0000544;Parent=HG002_chrY_T0001701;transcript_name=HG002_chrY_T0001701;gene_name=ENSG00000300595;ID=exon:HG002_chrY_T0001701:1;Name=ENSG00000300595;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	20838423	20838793	.	-	.	source_gene_common_name=ENSG00000274837;source_gene=ENSG00000274837.1;alternative_source_transcripts=ENST00000616477.1,ENST00000616477.1;gene_id=HG002_chrY_G0000545;gene_biotype=processed_pseudogene;gene_name=ENSG00000274837;gene_sources=liftoff;ID=HG002_chrY_G0000545;Name=ENSG00000274837
HG002_chrY	CAT	transcript	20838423	20838793	1000	-	.	source_transcript=ENST00000616477.1;source_transcript_name=ENST00000616477;source_gene=ENSG00000274837.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274837.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000616477.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616477.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274837;alternative_source_transcripts=ENST00000616477.1,ENST00000616477.1;transcript_id=HG002_chrY_T0001702;gene_id=HG002_chrY_G0000545;Parent=HG002_chrY_G0000545;transcript_name=HG002_chrY_T0001702;gene_name=ENSG00000274837;ID=HG002_chrY_T0001702;Name=ENSG00000274837
HG002_chrY	CAT	exon	20838423	20838793	.	-	.	source_transcript=ENST00000616477.1;source_transcript_name=ENST00000616477;source_gene=ENSG00000274837.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274837.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000616477.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274837;alternative_source_transcripts=ENST00000616477.1,ENST00000616477.1;transcript_id=HG002_chrY_T0001702;gene_id=HG002_chrY_G0000545;Parent=HG002_chrY_T0001702;transcript_name=HG002_chrY_T0001702;gene_name=ENSG00000274837;ID=exon:HG002_chrY_T0001702:0;Name=ENSG00000274837;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	20892862	20894139	.	-	.	source_gene_common_name=RCC2P2;source_gene=ENSG00000237997.1;alternative_source_transcripts=ENST00000422174.1,ENST00000422174.1;gene_id=HG002_chrY_G0000546;gene_biotype=processed_pseudogene;gene_name=RCC2P2;gene_sources=liftoff;ID=HG002_chrY_G0000546;Name=RCC2P2
HG002_chrY	CAT	transcript	20892862	20894139	1000	-	.	source_transcript=ENST00000422174.1;source_transcript_name=RCC2P2-201;source_gene=ENSG00000237997.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237997.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422174.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RCC2P2;alternative_source_transcripts=ENST00000422174.1,ENST00000422174.1;transcript_id=HG002_chrY_T0001703;gene_id=HG002_chrY_G0000546;Parent=HG002_chrY_G0000546;transcript_name=HG002_chrY_T0001703;gene_name=RCC2P2;ID=HG002_chrY_T0001703;Name=RCC2P2
HG002_chrY	CAT	exon	20892862	20892991	.	-	.	source_transcript=ENST00000422174.1;source_transcript_name=RCC2P2-201;source_gene=ENSG00000237997.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237997.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RCC2P2;alternative_source_transcripts=ENST00000422174.1,ENST00000422174.1;transcript_id=HG002_chrY_T0001703;gene_id=HG002_chrY_G0000546;Parent=HG002_chrY_T0001703;transcript_name=HG002_chrY_T0001703;gene_name=RCC2P2;ID=exon:HG002_chrY_T0001703:0;Name=RCC2P2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20892992	20893351	.	-	.	source_transcript=ENST00000422174.1;source_transcript_name=RCC2P2-201;source_gene=ENSG00000237997.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237997.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RCC2P2;alternative_source_transcripts=ENST00000422174.1,ENST00000422174.1;transcript_id=HG002_chrY_T0001703;gene_id=HG002_chrY_G0000546;Parent=HG002_chrY_T0001703;transcript_name=HG002_chrY_T0001703;gene_name=RCC2P2;ID=intron:HG002_chrY_T0001703:0;Name=RCC2P2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20893352	20894139	.	-	.	source_transcript=ENST00000422174.1;source_transcript_name=RCC2P2-201;source_gene=ENSG00000237997.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237997.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RCC2P2;alternative_source_transcripts=ENST00000422174.1,ENST00000422174.1;transcript_id=HG002_chrY_T0001703;gene_id=HG002_chrY_G0000546;Parent=HG002_chrY_T0001703;transcript_name=HG002_chrY_T0001703;gene_name=RCC2P2;ID=exon:HG002_chrY_T0001703:1;Name=RCC2P2;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	20907472	20918489	.	-	.	source_gene_common_name=ZNF886P;source_gene=ENSG00000232522.1;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;gene_id=HG002_chrY_G0000547;gene_biotype=unprocessed_pseudogene;gene_name=ZNF886P;gene_sources=liftoff;ID=HG002_chrY_G0000547;Name=ZNF886P
HG002_chrY	CAT	transcript	20907472	20918489	1000	-	.	source_transcript=ENST00000450781.1;source_transcript_name=ZNF886P-201;source_gene=ENSG00000232522.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232522.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450781.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF886P;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;transcript_id=HG002_chrY_T0001704;gene_id=HG002_chrY_G0000547;Parent=HG002_chrY_G0000547;transcript_name=HG002_chrY_T0001704;gene_name=ZNF886P;ID=HG002_chrY_T0001704;Name=ZNF886P
HG002_chrY	CAT	exon	20907472	20907986	.	-	.	source_transcript=ENST00000450781.1;source_transcript_name=ZNF886P-201;source_gene=ENSG00000232522.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232522.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF886P;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;transcript_id=HG002_chrY_T0001704;gene_id=HG002_chrY_G0000547;Parent=HG002_chrY_T0001704;transcript_name=HG002_chrY_T0001704;gene_name=ZNF886P;ID=exon:HG002_chrY_T0001704:0;Name=ZNF886P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20907987	20912027	.	-	.	source_transcript=ENST00000450781.1;source_transcript_name=ZNF886P-201;source_gene=ENSG00000232522.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232522.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF886P;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;transcript_id=HG002_chrY_T0001704;gene_id=HG002_chrY_G0000547;Parent=HG002_chrY_T0001704;transcript_name=HG002_chrY_T0001704;gene_name=ZNF886P;ID=intron:HG002_chrY_T0001704:0;Name=ZNF886P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20912028	20912116	.	-	.	source_transcript=ENST00000450781.1;source_transcript_name=ZNF886P-201;source_gene=ENSG00000232522.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232522.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF886P;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;transcript_id=HG002_chrY_T0001704;gene_id=HG002_chrY_G0000547;Parent=HG002_chrY_T0001704;transcript_name=HG002_chrY_T0001704;gene_name=ZNF886P;ID=exon:HG002_chrY_T0001704:1;Name=ZNF886P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	20912117	20918370	.	-	.	source_transcript=ENST00000450781.1;source_transcript_name=ZNF886P-201;source_gene=ENSG00000232522.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232522.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF886P;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;transcript_id=HG002_chrY_T0001704;gene_id=HG002_chrY_G0000547;Parent=HG002_chrY_T0001704;transcript_name=HG002_chrY_T0001704;gene_name=ZNF886P;ID=intron:HG002_chrY_T0001704:1;Name=ZNF886P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	20918371	20918489	.	-	.	source_transcript=ENST00000450781.1;source_transcript_name=ZNF886P-201;source_gene=ENSG00000232522.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232522.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF886P;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;transcript_id=HG002_chrY_T0001704;gene_id=HG002_chrY_G0000547;Parent=HG002_chrY_T0001704;transcript_name=HG002_chrY_T0001704;gene_name=ZNF886P;ID=exon:HG002_chrY_T0001704:2;Name=ZNF886P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	21265013	21271758	.	+	.	source_gene_common_name=ZNF885P;source_gene=ENSG00000228764.1;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;gene_id=HG002_chrY_G0000548;gene_biotype=processed_pseudogene;gene_name=ZNF885P;gene_sources=liftoff;ID=HG002_chrY_G0000548;Name=ZNF885P
HG002_chrY	CAT	transcript	21265013	21271758	1000	+	.	source_transcript=ENST00000420174.1;source_transcript_name=ZNF885P-201;source_gene=ENSG00000228764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420174.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF885P;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;transcript_id=HG002_chrY_T0001705;gene_id=HG002_chrY_G0000548;Parent=HG002_chrY_G0000548;transcript_name=HG002_chrY_T0001705;gene_name=ZNF885P;ID=HG002_chrY_T0001705;Name=ZNF885P
HG002_chrY	CAT	exon	21265013	21265072	.	+	.	source_transcript=ENST00000420174.1;source_transcript_name=ZNF885P-201;source_gene=ENSG00000228764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF885P;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;transcript_id=HG002_chrY_T0001705;gene_id=HG002_chrY_G0000548;Parent=HG002_chrY_T0001705;transcript_name=HG002_chrY_T0001705;gene_name=ZNF885P;ID=exon:HG002_chrY_T0001705:0;Name=ZNF885P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21265073	21270469	.	+	.	source_transcript=ENST00000420174.1;source_transcript_name=ZNF885P-201;source_gene=ENSG00000228764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF885P;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;transcript_id=HG002_chrY_T0001705;gene_id=HG002_chrY_G0000548;Parent=HG002_chrY_T0001705;transcript_name=HG002_chrY_T0001705;gene_name=ZNF885P;ID=intron:HG002_chrY_T0001705:0;Name=ZNF885P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21270470	21270981	.	+	.	source_transcript=ENST00000420174.1;source_transcript_name=ZNF885P-201;source_gene=ENSG00000228764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF885P;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;transcript_id=HG002_chrY_T0001705;gene_id=HG002_chrY_G0000548;Parent=HG002_chrY_T0001705;transcript_name=HG002_chrY_T0001705;gene_name=ZNF885P;ID=exon:HG002_chrY_T0001705:1;Name=ZNF885P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21270982	21271232	.	+	.	source_transcript=ENST00000420174.1;source_transcript_name=ZNF885P-201;source_gene=ENSG00000228764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF885P;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;transcript_id=HG002_chrY_T0001705;gene_id=HG002_chrY_G0000548;Parent=HG002_chrY_T0001705;transcript_name=HG002_chrY_T0001705;gene_name=ZNF885P;ID=intron:HG002_chrY_T0001705:1;Name=ZNF885P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21271233	21271758	.	+	.	source_transcript=ENST00000420174.1;source_transcript_name=ZNF885P-201;source_gene=ENSG00000228764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF885P;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;transcript_id=HG002_chrY_T0001705;gene_id=HG002_chrY_G0000548;Parent=HG002_chrY_T0001705;transcript_name=HG002_chrY_T0001705;gene_name=ZNF885P;ID=exon:HG002_chrY_T0001705:2;Name=ZNF885P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	21339878	21450472	.	-	.	source_gene_common_name=TTTY10;source_gene=ENSG00000229236.4;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;gene_id=HG002_chrY_G0000549;gene_biotype=lncRNA;gene_name=TTTY10;gene_sources=liftoff;ID=HG002_chrY_G0000549;Name=TTTY10
HG002_chrY	CAT	transcript	21339878	21450450	1000	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=HG002_chrY_T0001706;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_G0000549;transcript_name=HG002_chrY_T0001706;gene_name=TTTY10;ID=HG002_chrY_T0001706;Name=TTTY10
HG002_chrY	CAT	exon	21339878	21340784	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=HG002_chrY_T0001706;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001706;transcript_name=HG002_chrY_T0001706;gene_name=TTTY10;ID=exon:HG002_chrY_T0001706:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21340785	21341389	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=HG002_chrY_T0001706;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001706;transcript_name=HG002_chrY_T0001706;gene_name=TTTY10;ID=intron:HG002_chrY_T0001706:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21341390	21341629	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=HG002_chrY_T0001706;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001706;transcript_name=HG002_chrY_T0001706;gene_name=TTTY10;ID=exon:HG002_chrY_T0001706:1;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21341630	21343150	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=HG002_chrY_T0001706;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001706;transcript_name=HG002_chrY_T0001706;gene_name=TTTY10;ID=intron:HG002_chrY_T0001706:1;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21343151	21343210	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=HG002_chrY_T0001706;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001706;transcript_name=HG002_chrY_T0001706;gene_name=TTTY10;ID=exon:HG002_chrY_T0001706:2;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21343211	21382303	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=HG002_chrY_T0001706;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001706;transcript_name=HG002_chrY_T0001706;gene_name=TTTY10;ID=intron:HG002_chrY_T0001706:2;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21382304	21382408	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=HG002_chrY_T0001706;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001706;transcript_name=HG002_chrY_T0001706;gene_name=TTTY10;ID=exon:HG002_chrY_T0001706:3;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21382409	21450058	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=HG002_chrY_T0001706;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001706;transcript_name=HG002_chrY_T0001706;gene_name=TTTY10;ID=intron:HG002_chrY_T0001706:3;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21450059	21450450	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=HG002_chrY_T0001706;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001706;transcript_name=HG002_chrY_T0001706;gene_name=TTTY10;ID=exon:HG002_chrY_T0001706:4;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	21339878	21450468	1000	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG002_chrY_T0001707;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_G0000549;transcript_name=HG002_chrY_T0001707;gene_name=TTTY10;ID=HG002_chrY_T0001707;Name=TTTY10
HG002_chrY	CAT	exon	21339878	21340784	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG002_chrY_T0001707;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001707;transcript_name=HG002_chrY_T0001707;gene_name=TTTY10;ID=exon:HG002_chrY_T0001707:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21340785	21341389	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG002_chrY_T0001707;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001707;transcript_name=HG002_chrY_T0001707;gene_name=TTTY10;ID=intron:HG002_chrY_T0001707:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21341390	21341629	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG002_chrY_T0001707;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001707;transcript_name=HG002_chrY_T0001707;gene_name=TTTY10;ID=exon:HG002_chrY_T0001707:1;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21341630	21343150	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG002_chrY_T0001707;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001707;transcript_name=HG002_chrY_T0001707;gene_name=TTTY10;ID=intron:HG002_chrY_T0001707:1;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21343151	21343210	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG002_chrY_T0001707;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001707;transcript_name=HG002_chrY_T0001707;gene_name=TTTY10;ID=exon:HG002_chrY_T0001707:2;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21343211	21344833	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG002_chrY_T0001707;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001707;transcript_name=HG002_chrY_T0001707;gene_name=TTTY10;ID=intron:HG002_chrY_T0001707:2;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21344834	21344943	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG002_chrY_T0001707;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001707;transcript_name=HG002_chrY_T0001707;gene_name=TTTY10;ID=exon:HG002_chrY_T0001707:3;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21344944	21382303	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG002_chrY_T0001707;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001707;transcript_name=HG002_chrY_T0001707;gene_name=TTTY10;ID=intron:HG002_chrY_T0001707:3;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21382304	21382408	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG002_chrY_T0001707;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001707;transcript_name=HG002_chrY_T0001707;gene_name=TTTY10;ID=exon:HG002_chrY_T0001707:4;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21382409	21393222	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG002_chrY_T0001707;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001707;transcript_name=HG002_chrY_T0001707;gene_name=TTTY10;ID=intron:HG002_chrY_T0001707:4;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21393223	21393281	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG002_chrY_T0001707;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001707;transcript_name=HG002_chrY_T0001707;gene_name=TTTY10;ID=exon:HG002_chrY_T0001707:5;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21393282	21393987	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG002_chrY_T0001707;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001707;transcript_name=HG002_chrY_T0001707;gene_name=TTTY10;ID=intron:HG002_chrY_T0001707:5;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21393988	21394185	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG002_chrY_T0001707;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001707;transcript_name=HG002_chrY_T0001707;gene_name=TTTY10;ID=exon:HG002_chrY_T0001707:6;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21394186	21396083	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG002_chrY_T0001707;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001707;transcript_name=HG002_chrY_T0001707;gene_name=TTTY10;ID=intron:HG002_chrY_T0001707:6;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21396084	21396252	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG002_chrY_T0001707;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001707;transcript_name=HG002_chrY_T0001707;gene_name=TTTY10;ID=exon:HG002_chrY_T0001707:7;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21396253	21399219	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG002_chrY_T0001707;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001707;transcript_name=HG002_chrY_T0001707;gene_name=TTTY10;ID=intron:HG002_chrY_T0001707:7;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21399220	21399392	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG002_chrY_T0001707;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001707;transcript_name=HG002_chrY_T0001707;gene_name=TTTY10;ID=exon:HG002_chrY_T0001707:8;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21399393	21450058	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG002_chrY_T0001707;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001707;transcript_name=HG002_chrY_T0001707;gene_name=TTTY10;ID=intron:HG002_chrY_T0001707:8;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21450059	21450468	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG002_chrY_T0001707;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001707;transcript_name=HG002_chrY_T0001707;gene_name=TTTY10;ID=exon:HG002_chrY_T0001707:9;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	21339878	21450450	1000	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG002_chrY_T0001708;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_G0000549;transcript_name=HG002_chrY_T0001708;gene_name=TTTY10;ID=HG002_chrY_T0001708;Name=TTTY10
HG002_chrY	CAT	exon	21339878	21340784	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG002_chrY_T0001708;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001708;transcript_name=HG002_chrY_T0001708;gene_name=TTTY10;ID=exon:HG002_chrY_T0001708:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21340785	21341389	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG002_chrY_T0001708;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001708;transcript_name=HG002_chrY_T0001708;gene_name=TTTY10;ID=intron:HG002_chrY_T0001708:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21341390	21341629	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG002_chrY_T0001708;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001708;transcript_name=HG002_chrY_T0001708;gene_name=TTTY10;ID=exon:HG002_chrY_T0001708:1;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21341630	21343150	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG002_chrY_T0001708;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001708;transcript_name=HG002_chrY_T0001708;gene_name=TTTY10;ID=intron:HG002_chrY_T0001708:1;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21343151	21343210	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG002_chrY_T0001708;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001708;transcript_name=HG002_chrY_T0001708;gene_name=TTTY10;ID=exon:HG002_chrY_T0001708:2;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21343211	21344833	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG002_chrY_T0001708;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001708;transcript_name=HG002_chrY_T0001708;gene_name=TTTY10;ID=intron:HG002_chrY_T0001708:2;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21344834	21344943	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG002_chrY_T0001708;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001708;transcript_name=HG002_chrY_T0001708;gene_name=TTTY10;ID=exon:HG002_chrY_T0001708:3;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21344944	21382303	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG002_chrY_T0001708;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001708;transcript_name=HG002_chrY_T0001708;gene_name=TTTY10;ID=intron:HG002_chrY_T0001708:3;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21382304	21382408	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG002_chrY_T0001708;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001708;transcript_name=HG002_chrY_T0001708;gene_name=TTTY10;ID=exon:HG002_chrY_T0001708:4;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21382409	21396083	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG002_chrY_T0001708;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001708;transcript_name=HG002_chrY_T0001708;gene_name=TTTY10;ID=intron:HG002_chrY_T0001708:4;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21396084	21396252	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG002_chrY_T0001708;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001708;transcript_name=HG002_chrY_T0001708;gene_name=TTTY10;ID=exon:HG002_chrY_T0001708:5;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21396253	21399219	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG002_chrY_T0001708;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001708;transcript_name=HG002_chrY_T0001708;gene_name=TTTY10;ID=intron:HG002_chrY_T0001708:5;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21399220	21399392	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG002_chrY_T0001708;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001708;transcript_name=HG002_chrY_T0001708;gene_name=TTTY10;ID=exon:HG002_chrY_T0001708:6;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21399393	21450058	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG002_chrY_T0001708;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001708;transcript_name=HG002_chrY_T0001708;gene_name=TTTY10;ID=intron:HG002_chrY_T0001708:6;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21450059	21450450	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG002_chrY_T0001708;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001708;transcript_name=HG002_chrY_T0001708;gene_name=TTTY10;ID=exon:HG002_chrY_T0001708:7;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	21339951	21450175	1000	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG002_chrY_T0001709;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_G0000549;transcript_name=HG002_chrY_T0001709;gene_name=TTTY10;ID=HG002_chrY_T0001709;Name=TTTY10
HG002_chrY	CAT	exon	21339951	21340784	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG002_chrY_T0001709;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001709;transcript_name=HG002_chrY_T0001709;gene_name=TTTY10;ID=exon:HG002_chrY_T0001709:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21340785	21341389	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG002_chrY_T0001709;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001709;transcript_name=HG002_chrY_T0001709;gene_name=TTTY10;ID=intron:HG002_chrY_T0001709:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21341390	21341629	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG002_chrY_T0001709;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001709;transcript_name=HG002_chrY_T0001709;gene_name=TTTY10;ID=exon:HG002_chrY_T0001709:1;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21341630	21343150	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG002_chrY_T0001709;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001709;transcript_name=HG002_chrY_T0001709;gene_name=TTTY10;ID=intron:HG002_chrY_T0001709:1;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21343151	21343210	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG002_chrY_T0001709;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001709;transcript_name=HG002_chrY_T0001709;gene_name=TTTY10;ID=exon:HG002_chrY_T0001709:2;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21343211	21344833	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG002_chrY_T0001709;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001709;transcript_name=HG002_chrY_T0001709;gene_name=TTTY10;ID=intron:HG002_chrY_T0001709:2;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21344834	21344943	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG002_chrY_T0001709;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001709;transcript_name=HG002_chrY_T0001709;gene_name=TTTY10;ID=exon:HG002_chrY_T0001709:3;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21344944	21382303	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG002_chrY_T0001709;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001709;transcript_name=HG002_chrY_T0001709;gene_name=TTTY10;ID=intron:HG002_chrY_T0001709:3;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21382304	21382408	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG002_chrY_T0001709;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001709;transcript_name=HG002_chrY_T0001709;gene_name=TTTY10;ID=exon:HG002_chrY_T0001709:4;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21382409	21393222	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG002_chrY_T0001709;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001709;transcript_name=HG002_chrY_T0001709;gene_name=TTTY10;ID=intron:HG002_chrY_T0001709:4;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21393223	21393281	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG002_chrY_T0001709;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001709;transcript_name=HG002_chrY_T0001709;gene_name=TTTY10;ID=exon:HG002_chrY_T0001709:5;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21393282	21393987	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG002_chrY_T0001709;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001709;transcript_name=HG002_chrY_T0001709;gene_name=TTTY10;ID=intron:HG002_chrY_T0001709:5;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21393988	21394185	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG002_chrY_T0001709;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001709;transcript_name=HG002_chrY_T0001709;gene_name=TTTY10;ID=exon:HG002_chrY_T0001709:6;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21394186	21396083	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG002_chrY_T0001709;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001709;transcript_name=HG002_chrY_T0001709;gene_name=TTTY10;ID=intron:HG002_chrY_T0001709:6;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21396084	21396252	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG002_chrY_T0001709;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001709;transcript_name=HG002_chrY_T0001709;gene_name=TTTY10;ID=exon:HG002_chrY_T0001709:7;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21396253	21450058	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG002_chrY_T0001709;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001709;transcript_name=HG002_chrY_T0001709;gene_name=TTTY10;ID=intron:HG002_chrY_T0001709:7;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21450059	21450175	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG002_chrY_T0001709;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001709;transcript_name=HG002_chrY_T0001709;gene_name=TTTY10;ID=exon:HG002_chrY_T0001709:8;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	21340042	21450209	1000	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG002_chrY_T0001710;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_G0000549;transcript_name=HG002_chrY_T0001710;gene_name=TTTY10;ID=HG002_chrY_T0001710;Name=TTTY10
HG002_chrY	CAT	exon	21340042	21340784	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG002_chrY_T0001710;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001710;transcript_name=HG002_chrY_T0001710;gene_name=TTTY10;ID=exon:HG002_chrY_T0001710:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21340785	21341389	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG002_chrY_T0001710;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001710;transcript_name=HG002_chrY_T0001710;gene_name=TTTY10;ID=intron:HG002_chrY_T0001710:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21341390	21341629	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG002_chrY_T0001710;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001710;transcript_name=HG002_chrY_T0001710;gene_name=TTTY10;ID=exon:HG002_chrY_T0001710:1;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21341630	21343150	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG002_chrY_T0001710;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001710;transcript_name=HG002_chrY_T0001710;gene_name=TTTY10;ID=intron:HG002_chrY_T0001710:1;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21343151	21343210	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG002_chrY_T0001710;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001710;transcript_name=HG002_chrY_T0001710;gene_name=TTTY10;ID=exon:HG002_chrY_T0001710:2;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21343211	21344833	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG002_chrY_T0001710;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001710;transcript_name=HG002_chrY_T0001710;gene_name=TTTY10;ID=intron:HG002_chrY_T0001710:2;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21344834	21344943	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG002_chrY_T0001710;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001710;transcript_name=HG002_chrY_T0001710;gene_name=TTTY10;ID=exon:HG002_chrY_T0001710:3;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21344944	21382303	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG002_chrY_T0001710;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001710;transcript_name=HG002_chrY_T0001710;gene_name=TTTY10;ID=intron:HG002_chrY_T0001710:3;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21382304	21382408	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG002_chrY_T0001710;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001710;transcript_name=HG002_chrY_T0001710;gene_name=TTTY10;ID=exon:HG002_chrY_T0001710:4;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21382409	21450058	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG002_chrY_T0001710;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001710;transcript_name=HG002_chrY_T0001710;gene_name=TTTY10;ID=intron:HG002_chrY_T0001710:4;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21450059	21450209	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG002_chrY_T0001710;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001710;transcript_name=HG002_chrY_T0001710;gene_name=TTTY10;ID=exon:HG002_chrY_T0001710:5;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	21340278	21450315	1000	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG002_chrY_T0001711;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_G0000549;transcript_name=HG002_chrY_T0001711;gene_name=TTTY10;ID=HG002_chrY_T0001711;Name=TTTY10
HG002_chrY	CAT	exon	21340278	21340784	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG002_chrY_T0001711;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001711;transcript_name=HG002_chrY_T0001711;gene_name=TTTY10;ID=exon:HG002_chrY_T0001711:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21340785	21341389	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG002_chrY_T0001711;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001711;transcript_name=HG002_chrY_T0001711;gene_name=TTTY10;ID=intron:HG002_chrY_T0001711:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21341390	21341629	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG002_chrY_T0001711;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001711;transcript_name=HG002_chrY_T0001711;gene_name=TTTY10;ID=exon:HG002_chrY_T0001711:1;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21341630	21343150	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG002_chrY_T0001711;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001711;transcript_name=HG002_chrY_T0001711;gene_name=TTTY10;ID=intron:HG002_chrY_T0001711:1;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21343151	21343210	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG002_chrY_T0001711;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001711;transcript_name=HG002_chrY_T0001711;gene_name=TTTY10;ID=exon:HG002_chrY_T0001711:2;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21343211	21344833	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG002_chrY_T0001711;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001711;transcript_name=HG002_chrY_T0001711;gene_name=TTTY10;ID=intron:HG002_chrY_T0001711:2;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21344834	21344943	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG002_chrY_T0001711;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001711;transcript_name=HG002_chrY_T0001711;gene_name=TTTY10;ID=exon:HG002_chrY_T0001711:3;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21344944	21382303	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG002_chrY_T0001711;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001711;transcript_name=HG002_chrY_T0001711;gene_name=TTTY10;ID=intron:HG002_chrY_T0001711:3;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21382304	21382408	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG002_chrY_T0001711;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001711;transcript_name=HG002_chrY_T0001711;gene_name=TTTY10;ID=exon:HG002_chrY_T0001711:4;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21382409	21393222	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG002_chrY_T0001711;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001711;transcript_name=HG002_chrY_T0001711;gene_name=TTTY10;ID=intron:HG002_chrY_T0001711:4;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21393223	21393281	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG002_chrY_T0001711;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001711;transcript_name=HG002_chrY_T0001711;gene_name=TTTY10;ID=exon:HG002_chrY_T0001711:5;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21393282	21393839	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG002_chrY_T0001711;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001711;transcript_name=HG002_chrY_T0001711;gene_name=TTTY10;ID=intron:HG002_chrY_T0001711:5;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21393840	21393952	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG002_chrY_T0001711;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001711;transcript_name=HG002_chrY_T0001711;gene_name=TTTY10;ID=exon:HG002_chrY_T0001711:6;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21393953	21396083	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG002_chrY_T0001711;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001711;transcript_name=HG002_chrY_T0001711;gene_name=TTTY10;ID=intron:HG002_chrY_T0001711:6;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21396084	21396252	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG002_chrY_T0001711;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001711;transcript_name=HG002_chrY_T0001711;gene_name=TTTY10;ID=exon:HG002_chrY_T0001711:7;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21396253	21399219	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG002_chrY_T0001711;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001711;transcript_name=HG002_chrY_T0001711;gene_name=TTTY10;ID=intron:HG002_chrY_T0001711:7;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21399220	21399392	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG002_chrY_T0001711;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001711;transcript_name=HG002_chrY_T0001711;gene_name=TTTY10;ID=exon:HG002_chrY_T0001711:8;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21399393	21440020	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG002_chrY_T0001711;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001711;transcript_name=HG002_chrY_T0001711;gene_name=TTTY10;ID=intron:HG002_chrY_T0001711:8;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21440021	21440144	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG002_chrY_T0001711;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001711;transcript_name=HG002_chrY_T0001711;gene_name=TTTY10;ID=exon:HG002_chrY_T0001711:9;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21440145	21450058	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG002_chrY_T0001711;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001711;transcript_name=HG002_chrY_T0001711;gene_name=TTTY10;ID=intron:HG002_chrY_T0001711:9;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21450059	21450315	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG002_chrY_T0001711;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001711;transcript_name=HG002_chrY_T0001711;gene_name=TTTY10;ID=exon:HG002_chrY_T0001711:10;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	21340326	21450209	1000	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG002_chrY_T0001712;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_G0000549;transcript_name=HG002_chrY_T0001712;gene_name=TTTY10;ID=HG002_chrY_T0001712;Name=TTTY10
HG002_chrY	CAT	exon	21340326	21340784	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG002_chrY_T0001712;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001712;transcript_name=HG002_chrY_T0001712;gene_name=TTTY10;ID=exon:HG002_chrY_T0001712:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21340785	21341389	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG002_chrY_T0001712;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001712;transcript_name=HG002_chrY_T0001712;gene_name=TTTY10;ID=intron:HG002_chrY_T0001712:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21341390	21341629	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG002_chrY_T0001712;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001712;transcript_name=HG002_chrY_T0001712;gene_name=TTTY10;ID=exon:HG002_chrY_T0001712:1;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21341630	21343150	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG002_chrY_T0001712;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001712;transcript_name=HG002_chrY_T0001712;gene_name=TTTY10;ID=intron:HG002_chrY_T0001712:1;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21343151	21343210	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG002_chrY_T0001712;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001712;transcript_name=HG002_chrY_T0001712;gene_name=TTTY10;ID=exon:HG002_chrY_T0001712:2;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21343211	21382303	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG002_chrY_T0001712;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001712;transcript_name=HG002_chrY_T0001712;gene_name=TTTY10;ID=intron:HG002_chrY_T0001712:2;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21382304	21382408	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG002_chrY_T0001712;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001712;transcript_name=HG002_chrY_T0001712;gene_name=TTTY10;ID=exon:HG002_chrY_T0001712:3;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21382409	21396083	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG002_chrY_T0001712;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001712;transcript_name=HG002_chrY_T0001712;gene_name=TTTY10;ID=intron:HG002_chrY_T0001712:3;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21396084	21396252	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG002_chrY_T0001712;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001712;transcript_name=HG002_chrY_T0001712;gene_name=TTTY10;ID=exon:HG002_chrY_T0001712:4;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21396253	21399219	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG002_chrY_T0001712;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001712;transcript_name=HG002_chrY_T0001712;gene_name=TTTY10;ID=intron:HG002_chrY_T0001712:4;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21399220	21399392	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG002_chrY_T0001712;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001712;transcript_name=HG002_chrY_T0001712;gene_name=TTTY10;ID=exon:HG002_chrY_T0001712:5;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21399393	21450058	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG002_chrY_T0001712;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001712;transcript_name=HG002_chrY_T0001712;gene_name=TTTY10;ID=intron:HG002_chrY_T0001712:5;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21450059	21450209	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG002_chrY_T0001712;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001712;transcript_name=HG002_chrY_T0001712;gene_name=TTTY10;ID=exon:HG002_chrY_T0001712:6;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	21340630	21394180	1000	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG002_chrY_T0001713;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_G0000549;transcript_name=HG002_chrY_T0001713;gene_name=TTTY10;ID=HG002_chrY_T0001713;Name=TTTY10
HG002_chrY	CAT	exon	21340630	21340784	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG002_chrY_T0001713;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001713;transcript_name=HG002_chrY_T0001713;gene_name=TTTY10;ID=exon:HG002_chrY_T0001713:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21340785	21341389	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG002_chrY_T0001713;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001713;transcript_name=HG002_chrY_T0001713;gene_name=TTTY10;ID=intron:HG002_chrY_T0001713:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21341390	21341629	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG002_chrY_T0001713;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001713;transcript_name=HG002_chrY_T0001713;gene_name=TTTY10;ID=exon:HG002_chrY_T0001713:1;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21341630	21343150	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG002_chrY_T0001713;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001713;transcript_name=HG002_chrY_T0001713;gene_name=TTTY10;ID=intron:HG002_chrY_T0001713:1;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21343151	21343210	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG002_chrY_T0001713;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001713;transcript_name=HG002_chrY_T0001713;gene_name=TTTY10;ID=exon:HG002_chrY_T0001713:2;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21343211	21344833	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG002_chrY_T0001713;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001713;transcript_name=HG002_chrY_T0001713;gene_name=TTTY10;ID=intron:HG002_chrY_T0001713:2;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21344834	21344943	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG002_chrY_T0001713;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001713;transcript_name=HG002_chrY_T0001713;gene_name=TTTY10;ID=exon:HG002_chrY_T0001713:3;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21344944	21382303	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG002_chrY_T0001713;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001713;transcript_name=HG002_chrY_T0001713;gene_name=TTTY10;ID=intron:HG002_chrY_T0001713:3;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21382304	21382408	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG002_chrY_T0001713;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001713;transcript_name=HG002_chrY_T0001713;gene_name=TTTY10;ID=exon:HG002_chrY_T0001713:4;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21382409	21393222	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG002_chrY_T0001713;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001713;transcript_name=HG002_chrY_T0001713;gene_name=TTTY10;ID=intron:HG002_chrY_T0001713:4;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21393223	21394180	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG002_chrY_T0001713;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001713;transcript_name=HG002_chrY_T0001713;gene_name=TTTY10;ID=exon:HG002_chrY_T0001713:5;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	21341137	21450444	1000	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG002_chrY_T0001714;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_G0000549;transcript_name=HG002_chrY_T0001714;gene_name=TTTY10;ID=HG002_chrY_T0001714;Name=TTTY10
HG002_chrY	CAT	exon	21341137	21341629	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG002_chrY_T0001714;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001714;transcript_name=HG002_chrY_T0001714;gene_name=TTTY10;ID=exon:HG002_chrY_T0001714:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21341630	21343150	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG002_chrY_T0001714;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001714;transcript_name=HG002_chrY_T0001714;gene_name=TTTY10;ID=intron:HG002_chrY_T0001714:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21343151	21343210	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG002_chrY_T0001714;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001714;transcript_name=HG002_chrY_T0001714;gene_name=TTTY10;ID=exon:HG002_chrY_T0001714:1;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21343211	21344833	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG002_chrY_T0001714;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001714;transcript_name=HG002_chrY_T0001714;gene_name=TTTY10;ID=intron:HG002_chrY_T0001714:1;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21344834	21344943	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG002_chrY_T0001714;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001714;transcript_name=HG002_chrY_T0001714;gene_name=TTTY10;ID=exon:HG002_chrY_T0001714:2;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21344944	21382303	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG002_chrY_T0001714;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001714;transcript_name=HG002_chrY_T0001714;gene_name=TTTY10;ID=intron:HG002_chrY_T0001714:2;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21382304	21382408	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG002_chrY_T0001714;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001714;transcript_name=HG002_chrY_T0001714;gene_name=TTTY10;ID=exon:HG002_chrY_T0001714:3;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21382409	21393222	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG002_chrY_T0001714;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001714;transcript_name=HG002_chrY_T0001714;gene_name=TTTY10;ID=intron:HG002_chrY_T0001714:3;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21393223	21393281	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG002_chrY_T0001714;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001714;transcript_name=HG002_chrY_T0001714;gene_name=TTTY10;ID=exon:HG002_chrY_T0001714:4;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21393282	21393839	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG002_chrY_T0001714;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001714;transcript_name=HG002_chrY_T0001714;gene_name=TTTY10;ID=intron:HG002_chrY_T0001714:4;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21393840	21393952	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG002_chrY_T0001714;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001714;transcript_name=HG002_chrY_T0001714;gene_name=TTTY10;ID=exon:HG002_chrY_T0001714:5;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21393953	21396083	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG002_chrY_T0001714;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001714;transcript_name=HG002_chrY_T0001714;gene_name=TTTY10;ID=intron:HG002_chrY_T0001714:5;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21396084	21396252	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG002_chrY_T0001714;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001714;transcript_name=HG002_chrY_T0001714;gene_name=TTTY10;ID=exon:HG002_chrY_T0001714:6;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21396253	21399219	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG002_chrY_T0001714;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001714;transcript_name=HG002_chrY_T0001714;gene_name=TTTY10;ID=intron:HG002_chrY_T0001714:6;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21399220	21399392	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG002_chrY_T0001714;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001714;transcript_name=HG002_chrY_T0001714;gene_name=TTTY10;ID=exon:HG002_chrY_T0001714:7;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21399393	21450058	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG002_chrY_T0001714;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001714;transcript_name=HG002_chrY_T0001714;gene_name=TTTY10;ID=intron:HG002_chrY_T0001714:7;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21450059	21450444	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG002_chrY_T0001714;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001714;transcript_name=HG002_chrY_T0001714;gene_name=TTTY10;ID=exon:HG002_chrY_T0001714:8;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	21341454	21346106	1000	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=HG002_chrY_T0001715;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_G0000549;transcript_name=HG002_chrY_T0001715;gene_name=TTTY10;ID=HG002_chrY_T0001715;Name=TTTY10
HG002_chrY	CAT	exon	21341454	21341629	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=HG002_chrY_T0001715;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001715;transcript_name=HG002_chrY_T0001715;gene_name=TTTY10;ID=exon:HG002_chrY_T0001715:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21341630	21343150	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=HG002_chrY_T0001715;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001715;transcript_name=HG002_chrY_T0001715;gene_name=TTTY10;ID=intron:HG002_chrY_T0001715:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21343151	21343210	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=HG002_chrY_T0001715;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001715;transcript_name=HG002_chrY_T0001715;gene_name=TTTY10;ID=exon:HG002_chrY_T0001715:1;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21343211	21344833	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=HG002_chrY_T0001715;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001715;transcript_name=HG002_chrY_T0001715;gene_name=TTTY10;ID=intron:HG002_chrY_T0001715:1;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21344834	21344943	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=HG002_chrY_T0001715;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001715;transcript_name=HG002_chrY_T0001715;gene_name=TTTY10;ID=exon:HG002_chrY_T0001715:2;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21344944	21345722	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=HG002_chrY_T0001715;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001715;transcript_name=HG002_chrY_T0001715;gene_name=TTTY10;ID=intron:HG002_chrY_T0001715:2;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21345723	21346106	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=HG002_chrY_T0001715;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001715;transcript_name=HG002_chrY_T0001715;gene_name=TTTY10;ID=exon:HG002_chrY_T0001715:3;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	21378161	21450284	1000	-	.	source_transcript=ENST00000667496.1;source_transcript_name=TTTY10-212;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667496.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000667496.1,ENST00000667496.1;transcript_id=HG002_chrY_T0001716;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_G0000549;transcript_name=HG002_chrY_T0001716;gene_name=TTTY10;ID=HG002_chrY_T0001716;Name=TTTY10
HG002_chrY	CAT	exon	21378161	21382408	.	-	.	source_transcript=ENST00000667496.1;source_transcript_name=TTTY10-212;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667496.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000667496.1,ENST00000667496.1;transcript_id=HG002_chrY_T0001716;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001716;transcript_name=HG002_chrY_T0001716;gene_name=TTTY10;ID=exon:HG002_chrY_T0001716:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21382409	21450058	.	-	.	source_transcript=ENST00000667496.1;source_transcript_name=TTTY10-212;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667496.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000667496.1,ENST00000667496.1;transcript_id=HG002_chrY_T0001716;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001716;transcript_name=HG002_chrY_T0001716;gene_name=TTTY10;ID=intron:HG002_chrY_T0001716:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21450059	21450284	.	-	.	source_transcript=ENST00000667496.1;source_transcript_name=TTTY10-212;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667496.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000667496.1,ENST00000667496.1;transcript_id=HG002_chrY_T0001716;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001716;transcript_name=HG002_chrY_T0001716;gene_name=TTTY10;ID=exon:HG002_chrY_T0001716:1;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	21379428	21393808	1000	-	.	source_transcript=ENST00000659275.1;source_transcript_name=TTTY10-206;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000659275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000659275.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000659275.1,ENST00000659275.1;transcript_id=HG002_chrY_T0001717;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_G0000549;transcript_name=HG002_chrY_T0001717;gene_name=TTTY10;ID=HG002_chrY_T0001717;Name=TTTY10
HG002_chrY	CAT	exon	21379428	21382408	.	-	.	source_transcript=ENST00000659275.1;source_transcript_name=TTTY10-206;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000659275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000659275.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000659275.1,ENST00000659275.1;transcript_id=HG002_chrY_T0001717;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001717;transcript_name=HG002_chrY_T0001717;gene_name=TTTY10;ID=exon:HG002_chrY_T0001717:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21382409	21393222	.	-	.	source_transcript=ENST00000659275.1;source_transcript_name=TTTY10-206;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000659275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000659275.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000659275.1,ENST00000659275.1;transcript_id=HG002_chrY_T0001717;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001717;transcript_name=HG002_chrY_T0001717;gene_name=TTTY10;ID=intron:HG002_chrY_T0001717:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21393223	21393808	.	-	.	source_transcript=ENST00000659275.1;source_transcript_name=TTTY10-206;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000659275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000659275.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000659275.1,ENST00000659275.1;transcript_id=HG002_chrY_T0001717;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001717;transcript_name=HG002_chrY_T0001717;gene_name=TTTY10;ID=exon:HG002_chrY_T0001717:1;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	21381719	21450098	1000	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=HG002_chrY_T0001718;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_G0000549;transcript_name=HG002_chrY_T0001718;gene_name=TTTY10;ID=HG002_chrY_T0001718;Name=TTTY10
HG002_chrY	CAT	exon	21381719	21382408	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=HG002_chrY_T0001718;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001718;transcript_name=HG002_chrY_T0001718;gene_name=TTTY10;ID=exon:HG002_chrY_T0001718:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21382409	21393987	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=HG002_chrY_T0001718;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001718;transcript_name=HG002_chrY_T0001718;gene_name=TTTY10;ID=intron:HG002_chrY_T0001718:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21393988	21394185	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=HG002_chrY_T0001718;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001718;transcript_name=HG002_chrY_T0001718;gene_name=TTTY10;ID=exon:HG002_chrY_T0001718:1;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21394186	21396083	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=HG002_chrY_T0001718;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001718;transcript_name=HG002_chrY_T0001718;gene_name=TTTY10;ID=intron:HG002_chrY_T0001718:1;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21396084	21396252	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=HG002_chrY_T0001718;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001718;transcript_name=HG002_chrY_T0001718;gene_name=TTTY10;ID=exon:HG002_chrY_T0001718:2;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21396253	21399219	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=HG002_chrY_T0001718;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001718;transcript_name=HG002_chrY_T0001718;gene_name=TTTY10;ID=intron:HG002_chrY_T0001718:2;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21399220	21399392	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=HG002_chrY_T0001718;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001718;transcript_name=HG002_chrY_T0001718;gene_name=TTTY10;ID=exon:HG002_chrY_T0001718:3;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21399393	21450058	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=HG002_chrY_T0001718;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001718;transcript_name=HG002_chrY_T0001718;gene_name=TTTY10;ID=intron:HG002_chrY_T0001718:3;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21450059	21450098	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=HG002_chrY_T0001718;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001718;transcript_name=HG002_chrY_T0001718;gene_name=TTTY10;ID=exon:HG002_chrY_T0001718:4;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	21381721	21450472	1000	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=HG002_chrY_T0001719;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_G0000549;transcript_name=HG002_chrY_T0001719;gene_name=TTTY10;ID=HG002_chrY_T0001719;Name=TTTY10
HG002_chrY	CAT	exon	21381721	21382408	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=HG002_chrY_T0001719;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001719;transcript_name=HG002_chrY_T0001719;gene_name=TTTY10;ID=exon:HG002_chrY_T0001719:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21382409	21393987	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=HG002_chrY_T0001719;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001719;transcript_name=HG002_chrY_T0001719;gene_name=TTTY10;ID=intron:HG002_chrY_T0001719:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21393988	21394185	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=HG002_chrY_T0001719;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001719;transcript_name=HG002_chrY_T0001719;gene_name=TTTY10;ID=exon:HG002_chrY_T0001719:1;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21394186	21396083	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=HG002_chrY_T0001719;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001719;transcript_name=HG002_chrY_T0001719;gene_name=TTTY10;ID=intron:HG002_chrY_T0001719:1;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21396084	21396252	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=HG002_chrY_T0001719;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001719;transcript_name=HG002_chrY_T0001719;gene_name=TTTY10;ID=exon:HG002_chrY_T0001719:2;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21396253	21450058	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=HG002_chrY_T0001719;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001719;transcript_name=HG002_chrY_T0001719;gene_name=TTTY10;ID=intron:HG002_chrY_T0001719:2;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21450059	21450472	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=HG002_chrY_T0001719;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001719;transcript_name=HG002_chrY_T0001719;gene_name=TTTY10;ID=exon:HG002_chrY_T0001719:3;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	21382034	21450098	1000	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG002_chrY_T0001720;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_G0000549;transcript_name=HG002_chrY_T0001720;gene_name=TTTY10;ID=HG002_chrY_T0001720;Name=TTTY10
HG002_chrY	CAT	exon	21382034	21382408	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG002_chrY_T0001720;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001720;transcript_name=HG002_chrY_T0001720;gene_name=TTTY10;ID=exon:HG002_chrY_T0001720:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21382409	21393222	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG002_chrY_T0001720;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001720;transcript_name=HG002_chrY_T0001720;gene_name=TTTY10;ID=intron:HG002_chrY_T0001720:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21393223	21393281	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG002_chrY_T0001720;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001720;transcript_name=HG002_chrY_T0001720;gene_name=TTTY10;ID=exon:HG002_chrY_T0001720:1;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21393282	21393839	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG002_chrY_T0001720;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001720;transcript_name=HG002_chrY_T0001720;gene_name=TTTY10;ID=intron:HG002_chrY_T0001720:1;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21393840	21393952	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG002_chrY_T0001720;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001720;transcript_name=HG002_chrY_T0001720;gene_name=TTTY10;ID=exon:HG002_chrY_T0001720:2;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21393953	21396083	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG002_chrY_T0001720;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001720;transcript_name=HG002_chrY_T0001720;gene_name=TTTY10;ID=intron:HG002_chrY_T0001720:2;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21396084	21396252	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG002_chrY_T0001720;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001720;transcript_name=HG002_chrY_T0001720;gene_name=TTTY10;ID=exon:HG002_chrY_T0001720:3;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21396253	21399219	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG002_chrY_T0001720;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001720;transcript_name=HG002_chrY_T0001720;gene_name=TTTY10;ID=intron:HG002_chrY_T0001720:3;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21399220	21399392	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG002_chrY_T0001720;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001720;transcript_name=HG002_chrY_T0001720;gene_name=TTTY10;ID=exon:HG002_chrY_T0001720:4;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21399393	21402146	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG002_chrY_T0001720;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001720;transcript_name=HG002_chrY_T0001720;gene_name=TTTY10;ID=intron:HG002_chrY_T0001720:4;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21402147	21402238	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG002_chrY_T0001720;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001720;transcript_name=HG002_chrY_T0001720;gene_name=TTTY10;ID=exon:HG002_chrY_T0001720:5;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21402239	21450058	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG002_chrY_T0001720;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001720;transcript_name=HG002_chrY_T0001720;gene_name=TTTY10;ID=intron:HG002_chrY_T0001720:5;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21450059	21450098	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG002_chrY_T0001720;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001720;transcript_name=HG002_chrY_T0001720;gene_name=TTTY10;ID=exon:HG002_chrY_T0001720:6;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	21394062	21450436	1000	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=HG002_chrY_T0001721;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_G0000549;transcript_name=HG002_chrY_T0001721;gene_name=TTTY10;ID=HG002_chrY_T0001721;Name=TTTY10
HG002_chrY	CAT	exon	21394062	21394185	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=HG002_chrY_T0001721;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001721;transcript_name=HG002_chrY_T0001721;gene_name=TTTY10;ID=exon:HG002_chrY_T0001721:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21394186	21396083	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=HG002_chrY_T0001721;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001721;transcript_name=HG002_chrY_T0001721;gene_name=TTTY10;ID=intron:HG002_chrY_T0001721:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21396084	21396252	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=HG002_chrY_T0001721;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001721;transcript_name=HG002_chrY_T0001721;gene_name=TTTY10;ID=exon:HG002_chrY_T0001721:1;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21396253	21399219	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=HG002_chrY_T0001721;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001721;transcript_name=HG002_chrY_T0001721;gene_name=TTTY10;ID=intron:HG002_chrY_T0001721:1;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21399220	21399392	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=HG002_chrY_T0001721;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001721;transcript_name=HG002_chrY_T0001721;gene_name=TTTY10;ID=exon:HG002_chrY_T0001721:2;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21399393	21402146	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=HG002_chrY_T0001721;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001721;transcript_name=HG002_chrY_T0001721;gene_name=TTTY10;ID=intron:HG002_chrY_T0001721:2;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21402147	21402238	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=HG002_chrY_T0001721;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001721;transcript_name=HG002_chrY_T0001721;gene_name=TTTY10;ID=exon:HG002_chrY_T0001721:3;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21402239	21450058	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=HG002_chrY_T0001721;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001721;transcript_name=HG002_chrY_T0001721;gene_name=TTTY10;ID=intron:HG002_chrY_T0001721:3;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21450059	21450436	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=HG002_chrY_T0001721;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001721;transcript_name=HG002_chrY_T0001721;gene_name=TTTY10;ID=exon:HG002_chrY_T0001721:4;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	21395664	21450450	1000	-	.	source_transcript=ENST00000755219.1;source_transcript_name=TTTY10-217;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755219.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755219.1,ENST00000755219.1;transcript_id=HG002_chrY_T0001722;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_G0000549;transcript_name=HG002_chrY_T0001722;gene_name=TTTY10;ID=HG002_chrY_T0001722;Name=TTTY10
HG002_chrY	CAT	exon	21395664	21396252	.	-	.	source_transcript=ENST00000755219.1;source_transcript_name=TTTY10-217;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755219.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755219.1,ENST00000755219.1;transcript_id=HG002_chrY_T0001722;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001722;transcript_name=HG002_chrY_T0001722;gene_name=TTTY10;ID=exon:HG002_chrY_T0001722:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21396253	21399219	.	-	.	source_transcript=ENST00000755219.1;source_transcript_name=TTTY10-217;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755219.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755219.1,ENST00000755219.1;transcript_id=HG002_chrY_T0001722;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001722;transcript_name=HG002_chrY_T0001722;gene_name=TTTY10;ID=intron:HG002_chrY_T0001722:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21399220	21399392	.	-	.	source_transcript=ENST00000755219.1;source_transcript_name=TTTY10-217;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755219.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755219.1,ENST00000755219.1;transcript_id=HG002_chrY_T0001722;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001722;transcript_name=HG002_chrY_T0001722;gene_name=TTTY10;ID=exon:HG002_chrY_T0001722:1;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21399393	21450058	.	-	.	source_transcript=ENST00000755219.1;source_transcript_name=TTTY10-217;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755219.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755219.1,ENST00000755219.1;transcript_id=HG002_chrY_T0001722;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001722;transcript_name=HG002_chrY_T0001722;gene_name=TTTY10;ID=intron:HG002_chrY_T0001722:1;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21450059	21450450	.	-	.	source_transcript=ENST00000755219.1;source_transcript_name=TTTY10-217;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755219.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755219.1,ENST00000755219.1;transcript_id=HG002_chrY_T0001722;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001722;transcript_name=HG002_chrY_T0001722;gene_name=TTTY10;ID=exon:HG002_chrY_T0001722:2;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	21449885	21450436	1000	-	.	source_transcript=ENST00000755220.1;source_transcript_name=TTTY10-218;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755220.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755220.1,ENST00000755220.1;transcript_id=HG002_chrY_T0001724;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_G0000549;transcript_name=HG002_chrY_T0001724;gene_name=TTTY10;ID=HG002_chrY_T0001724;Name=TTTY10
HG002_chrY	CAT	exon	21449885	21450436	.	-	.	source_transcript=ENST00000755220.1;source_transcript_name=TTTY10-218;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755220.1,ENST00000755220.1;transcript_id=HG002_chrY_T0001724;gene_id=HG002_chrY_G0000549;Parent=HG002_chrY_T0001724;transcript_name=HG002_chrY_T0001724;gene_name=TTTY10;ID=exon:HG002_chrY_T0001724:0;Name=TTTY10;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	21445175	21445472	.	-	.	source_gene_common_name=KDM5DP1;source_gene=ENSG00000277438.1;alternative_source_transcripts=ENST00000622542.1,ENST00000622542.1;gene_id=HG002_chrY_G0000550;gene_biotype=processed_pseudogene;gene_name=KDM5DP1;gene_sources=liftoff;ID=HG002_chrY_G0000550;Name=KDM5DP1
HG002_chrY	CAT	transcript	21445175	21445472	1000	-	.	source_transcript=ENST00000622542.1;source_transcript_name=KDM5DP1-201;source_gene=ENSG00000277438.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000277438.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000622542.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622542.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5DP1;alternative_source_transcripts=ENST00000622542.1,ENST00000622542.1;transcript_id=HG002_chrY_T0001723;gene_id=HG002_chrY_G0000550;Parent=HG002_chrY_G0000550;transcript_name=HG002_chrY_T0001723;gene_name=KDM5DP1;ID=HG002_chrY_T0001723;Name=KDM5DP1
HG002_chrY	CAT	exon	21445175	21445472	.	-	.	source_transcript=ENST00000622542.1;source_transcript_name=KDM5DP1-201;source_gene=ENSG00000277438.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000277438.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000622542.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622542.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5DP1;alternative_source_transcripts=ENST00000622542.1,ENST00000622542.1;transcript_id=HG002_chrY_T0001723;gene_id=HG002_chrY_G0000550;Parent=HG002_chrY_T0001723;transcript_name=HG002_chrY_T0001723;gene_name=KDM5DP1;ID=exon:HG002_chrY_T0001723:0;Name=KDM5DP1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	21450729	21468108	.	+	.	source_gene_common_name=EIF1AY;source_gene=ENSG00000198692.10;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;gene_id=HG002_chrY_G0000551;gene_biotype=protein_coding;gene_name=EIF1AY;gene_sources=liftoff;ID=HG002_chrY_G0000551;Name=EIF1AY
HG002_chrY	CAT	transcript	21450729	21468108	100	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG002_chrY_T0001725;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_G0000551;transcript_name=HG002_chrY_T0001725;gene_name=EIF1AY;ID=HG002_chrY_T0001725;Name=EIF1AY
HG002_chrY	CAT	exon	21450729	21450840	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG002_chrY_T0001725;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001725;transcript_name=HG002_chrY_T0001725;gene_name=EIF1AY;ID=exon:HG002_chrY_T0001725:0;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	21450825	21450840	.	+	0	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG002_chrY_T0001725;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001725;transcript_name=HG002_chrY_T0001725;gene_name=EIF1AY;ID=CDS:HG002_chrY_T0001725:0;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	21450825	21450827	.	+	0	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG002_chrY_T0001725;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001725;transcript_name=HG002_chrY_T0001725;gene_name=EIF1AY;ID=start_codon:HG002_chrY_T0001725;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21450841	21454560	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG002_chrY_T0001725;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001725;transcript_name=HG002_chrY_T0001725;gene_name=EIF1AY;ID=intron:HG002_chrY_T0001725:0;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21454561	21454644	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG002_chrY_T0001725;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001725;transcript_name=HG002_chrY_T0001725;gene_name=EIF1AY;ID=exon:HG002_chrY_T0001725:1;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	21454561	21454644	.	+	2	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG002_chrY_T0001725;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001725;transcript_name=HG002_chrY_T0001725;gene_name=EIF1AY;ID=CDS:HG002_chrY_T0001725:1;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21454645	21457542	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG002_chrY_T0001725;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001725;transcript_name=HG002_chrY_T0001725;gene_name=EIF1AY;ID=intron:HG002_chrY_T0001725:1;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21457543	21457646	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG002_chrY_T0001725;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001725;transcript_name=HG002_chrY_T0001725;gene_name=EIF1AY;ID=exon:HG002_chrY_T0001725:2;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	21457543	21457646	.	+	2	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG002_chrY_T0001725;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001725;transcript_name=HG002_chrY_T0001725;gene_name=EIF1AY;ID=CDS:HG002_chrY_T0001725:2;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21457647	21459427	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG002_chrY_T0001725;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001725;transcript_name=HG002_chrY_T0001725;gene_name=EIF1AY;ID=intron:HG002_chrY_T0001725:2;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21459428	21459478	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG002_chrY_T0001725;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001725;transcript_name=HG002_chrY_T0001725;gene_name=EIF1AY;ID=exon:HG002_chrY_T0001725:3;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	21459428	21459478	.	+	0	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG002_chrY_T0001725;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001725;transcript_name=HG002_chrY_T0001725;gene_name=EIF1AY;ID=CDS:HG002_chrY_T0001725:3;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21459479	21462977	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG002_chrY_T0001725;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001725;transcript_name=HG002_chrY_T0001725;gene_name=EIF1AY;ID=intron:HG002_chrY_T0001725:3;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21462978	21463059	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG002_chrY_T0001725;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001725;transcript_name=HG002_chrY_T0001725;gene_name=EIF1AY;ID=exon:HG002_chrY_T0001725:4;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	21462978	21463059	.	+	0	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG002_chrY_T0001725;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001725;transcript_name=HG002_chrY_T0001725;gene_name=EIF1AY;ID=CDS:HG002_chrY_T0001725:4;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21463060	21464437	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG002_chrY_T0001725;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001725;transcript_name=HG002_chrY_T0001725;gene_name=EIF1AY;ID=intron:HG002_chrY_T0001725:4;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21464438	21464529	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG002_chrY_T0001725;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001725;transcript_name=HG002_chrY_T0001725;gene_name=EIF1AY;ID=exon:HG002_chrY_T0001725:5;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	21464438	21464529	.	+	2	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG002_chrY_T0001725;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001725;transcript_name=HG002_chrY_T0001725;gene_name=EIF1AY;ID=CDS:HG002_chrY_T0001725:5;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21464530	21467294	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG002_chrY_T0001725;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001725;transcript_name=HG002_chrY_T0001725;gene_name=EIF1AY;ID=intron:HG002_chrY_T0001725:5;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21467295	21468108	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG002_chrY_T0001725;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001725;transcript_name=HG002_chrY_T0001725;gene_name=EIF1AY;ID=exon:HG002_chrY_T0001725:6;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	21467295	21467300	.	+	0	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG002_chrY_T0001725;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001725;transcript_name=HG002_chrY_T0001725;gene_name=EIF1AY;ID=CDS:HG002_chrY_T0001725:6;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	21467298	21467300	.	+	0	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG002_chrY_T0001725;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001725;transcript_name=HG002_chrY_T0001725;gene_name=EIF1AY;ID=stop_codon:HG002_chrY_T0001725;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	21450731	21463483	1000	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=HG002_chrY_T0001726;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_G0000551;transcript_name=HG002_chrY_T0001726;gene_name=EIF1AY;ID=HG002_chrY_T0001726;Name=EIF1AY
HG002_chrY	CAT	exon	21450731	21450840	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=HG002_chrY_T0001726;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001726;transcript_name=HG002_chrY_T0001726;gene_name=EIF1AY;ID=exon:HG002_chrY_T0001726:0;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21450841	21454560	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=HG002_chrY_T0001726;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001726;transcript_name=HG002_chrY_T0001726;gene_name=EIF1AY;ID=intron:HG002_chrY_T0001726:0;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21454561	21454644	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=HG002_chrY_T0001726;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001726;transcript_name=HG002_chrY_T0001726;gene_name=EIF1AY;ID=exon:HG002_chrY_T0001726:1;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21454645	21457542	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=HG002_chrY_T0001726;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001726;transcript_name=HG002_chrY_T0001726;gene_name=EIF1AY;ID=intron:HG002_chrY_T0001726:1;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21457543	21457646	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=HG002_chrY_T0001726;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001726;transcript_name=HG002_chrY_T0001726;gene_name=EIF1AY;ID=exon:HG002_chrY_T0001726:2;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21457647	21459427	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=HG002_chrY_T0001726;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001726;transcript_name=HG002_chrY_T0001726;gene_name=EIF1AY;ID=intron:HG002_chrY_T0001726:2;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21459428	21459478	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=HG002_chrY_T0001726;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001726;transcript_name=HG002_chrY_T0001726;gene_name=EIF1AY;ID=exon:HG002_chrY_T0001726:3;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21459479	21462977	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=HG002_chrY_T0001726;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001726;transcript_name=HG002_chrY_T0001726;gene_name=EIF1AY;ID=intron:HG002_chrY_T0001726:3;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21462978	21463483	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=HG002_chrY_T0001726;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001726;transcript_name=HG002_chrY_T0001726;gene_name=EIF1AY;ID=exon:HG002_chrY_T0001726:4;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	21450747	21467584	100	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG002_chrY_T0001727;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_G0000551;transcript_name=HG002_chrY_T0001727;gene_name=EIF1AY;ID=HG002_chrY_T0001727;Name=EIF1AY
HG002_chrY	CAT	exon	21450747	21450840	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG002_chrY_T0001727;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001727;transcript_name=HG002_chrY_T0001727;gene_name=EIF1AY;ID=exon:HG002_chrY_T0001727:0;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	21450825	21450840	.	+	0	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG002_chrY_T0001727;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001727;transcript_name=HG002_chrY_T0001727;gene_name=EIF1AY;ID=CDS:HG002_chrY_T0001727:0;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	21450825	21450827	.	+	0	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG002_chrY_T0001727;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001727;transcript_name=HG002_chrY_T0001727;gene_name=EIF1AY;ID=start_codon:HG002_chrY_T0001727;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21450841	21454560	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG002_chrY_T0001727;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001727;transcript_name=HG002_chrY_T0001727;gene_name=EIF1AY;ID=intron:HG002_chrY_T0001727:0;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21454561	21454644	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG002_chrY_T0001727;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001727;transcript_name=HG002_chrY_T0001727;gene_name=EIF1AY;ID=exon:HG002_chrY_T0001727:1;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	21454561	21454644	.	+	2	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG002_chrY_T0001727;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001727;transcript_name=HG002_chrY_T0001727;gene_name=EIF1AY;ID=CDS:HG002_chrY_T0001727:1;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21454645	21457542	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG002_chrY_T0001727;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001727;transcript_name=HG002_chrY_T0001727;gene_name=EIF1AY;ID=intron:HG002_chrY_T0001727:1;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21457543	21457646	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG002_chrY_T0001727;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001727;transcript_name=HG002_chrY_T0001727;gene_name=EIF1AY;ID=exon:HG002_chrY_T0001727:2;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	21457543	21457646	.	+	2	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG002_chrY_T0001727;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001727;transcript_name=HG002_chrY_T0001727;gene_name=EIF1AY;ID=CDS:HG002_chrY_T0001727:2;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21457647	21462977	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG002_chrY_T0001727;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001727;transcript_name=HG002_chrY_T0001727;gene_name=EIF1AY;ID=intron:HG002_chrY_T0001727:2;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21462978	21463059	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG002_chrY_T0001727;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001727;transcript_name=HG002_chrY_T0001727;gene_name=EIF1AY;ID=exon:HG002_chrY_T0001727:3;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	21462978	21463059	.	+	0	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG002_chrY_T0001727;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001727;transcript_name=HG002_chrY_T0001727;gene_name=EIF1AY;ID=CDS:HG002_chrY_T0001727:3;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21463060	21464437	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG002_chrY_T0001727;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001727;transcript_name=HG002_chrY_T0001727;gene_name=EIF1AY;ID=intron:HG002_chrY_T0001727:3;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21464438	21464529	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG002_chrY_T0001727;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001727;transcript_name=HG002_chrY_T0001727;gene_name=EIF1AY;ID=exon:HG002_chrY_T0001727:4;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	21464438	21464529	.	+	2	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG002_chrY_T0001727;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001727;transcript_name=HG002_chrY_T0001727;gene_name=EIF1AY;ID=CDS:HG002_chrY_T0001727:4;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21464530	21467294	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG002_chrY_T0001727;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001727;transcript_name=HG002_chrY_T0001727;gene_name=EIF1AY;ID=intron:HG002_chrY_T0001727:4;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21467295	21467584	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG002_chrY_T0001727;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001727;transcript_name=HG002_chrY_T0001727;gene_name=EIF1AY;ID=exon:HG002_chrY_T0001727:5;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	21467295	21467300	.	+	0	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG002_chrY_T0001727;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001727;transcript_name=HG002_chrY_T0001727;gene_name=EIF1AY;ID=CDS:HG002_chrY_T0001727:5;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	21467298	21467300	.	+	0	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG002_chrY_T0001727;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001727;transcript_name=HG002_chrY_T0001727;gene_name=EIF1AY;ID=stop_codon:HG002_chrY_T0001727;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	21461672	21467584	1000	+	.	source_transcript=ENST00000464196.5;source_transcript_name=EIF1AY-203;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000464196.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000464196.5;transcript_score=299.93600000000004;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000464196.5,ENST00000464196.5;transcript_id=HG002_chrY_T0001728;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_G0000551;transcript_name=HG002_chrY_T0001728;gene_name=EIF1AY;ID=HG002_chrY_T0001728;Name=EIF1AY
HG002_chrY	CAT	exon	21461672	21464529	.	+	.	source_transcript=ENST00000464196.5;source_transcript_name=EIF1AY-203;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000464196.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000464196.5;transcript_score=299.93600000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000464196.5,ENST00000464196.5;transcript_id=HG002_chrY_T0001728;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001728;transcript_name=HG002_chrY_T0001728;gene_name=EIF1AY;ID=exon:HG002_chrY_T0001728:0;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21464530	21467294	.	+	.	source_transcript=ENST00000464196.5;source_transcript_name=EIF1AY-203;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000464196.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000464196.5;transcript_score=299.93600000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000464196.5,ENST00000464196.5;transcript_id=HG002_chrY_T0001728;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001728;transcript_name=HG002_chrY_T0001728;gene_name=EIF1AY;ID=intron:HG002_chrY_T0001728:0;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21467295	21467584	.	+	.	source_transcript=ENST00000464196.5;source_transcript_name=EIF1AY-203;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000464196.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000464196.5;transcript_score=299.93600000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000464196.5,ENST00000464196.5;transcript_id=HG002_chrY_T0001728;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001728;transcript_name=HG002_chrY_T0001728;gene_name=EIF1AY;ID=exon:HG002_chrY_T0001728:1;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	21462801	21467584	1000	+	.	source_transcript=ENST00000485584.1;source_transcript_name=EIF1AY-205;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000485584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485584.1;transcript_score=299.844;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000485584.1,ENST00000485584.1;transcript_id=HG002_chrY_T0001729;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_G0000551;transcript_name=HG002_chrY_T0001729;gene_name=EIF1AY;ID=HG002_chrY_T0001729;Name=EIF1AY
HG002_chrY	CAT	exon	21462801	21463059	.	+	.	source_transcript=ENST00000485584.1;source_transcript_name=EIF1AY-205;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000485584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485584.1;transcript_score=299.844;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000485584.1,ENST00000485584.1;transcript_id=HG002_chrY_T0001729;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001729;transcript_name=HG002_chrY_T0001729;gene_name=EIF1AY;ID=exon:HG002_chrY_T0001729:0;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21463060	21464437	.	+	.	source_transcript=ENST00000485584.1;source_transcript_name=EIF1AY-205;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000485584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485584.1;transcript_score=299.844;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000485584.1,ENST00000485584.1;transcript_id=HG002_chrY_T0001729;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001729;transcript_name=HG002_chrY_T0001729;gene_name=EIF1AY;ID=intron:HG002_chrY_T0001729:0;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21464438	21464529	.	+	.	source_transcript=ENST00000485584.1;source_transcript_name=EIF1AY-205;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000485584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485584.1;transcript_score=299.844;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000485584.1,ENST00000485584.1;transcript_id=HG002_chrY_T0001729;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001729;transcript_name=HG002_chrY_T0001729;gene_name=EIF1AY;ID=exon:HG002_chrY_T0001729:1;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21464530	21467294	.	+	.	source_transcript=ENST00000485584.1;source_transcript_name=EIF1AY-205;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000485584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485584.1;transcript_score=299.844;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000485584.1,ENST00000485584.1;transcript_id=HG002_chrY_T0001729;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001729;transcript_name=HG002_chrY_T0001729;gene_name=EIF1AY;ID=intron:HG002_chrY_T0001729:1;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21467295	21467584	.	+	.	source_transcript=ENST00000485584.1;source_transcript_name=EIF1AY-205;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000485584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485584.1;transcript_score=299.844;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000485584.1,ENST00000485584.1;transcript_id=HG002_chrY_T0001729;gene_id=HG002_chrY_G0000551;Parent=HG002_chrY_T0001729;transcript_name=HG002_chrY_T0001729;gene_name=EIF1AY;ID=exon:HG002_chrY_T0001729:2;Name=EIF1AY;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	21600301	21609492	.	-	.	source_gene_common_name=ENSG00000286247;source_gene=ENSG00000286247.2;alternative_source_transcripts=ENST00000651369.1,ENST00000651369.1;gene_id=HG002_chrY_G0000552;gene_biotype=lncRNA;gene_name=ENSG00000286247;gene_sources=liftoff;ID=HG002_chrY_G0000552;Name=ENSG00000286247
HG002_chrY	CAT	transcript	21600301	21609492	1000	-	.	source_transcript=ENST00000651369.1;source_transcript_name=ENST00000651369;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651369.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000651369.1,ENST00000651369.1;transcript_id=HG002_chrY_T0001730;gene_id=HG002_chrY_G0000552;Parent=HG002_chrY_G0000552;transcript_name=HG002_chrY_T0001730;gene_name=ENSG00000286247;ID=HG002_chrY_T0001730;Name=ENSG00000286247
HG002_chrY	CAT	exon	21600301	21601067	.	-	.	source_transcript=ENST00000651369.1;source_transcript_name=ENST00000651369;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651369.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000651369.1,ENST00000651369.1;transcript_id=HG002_chrY_T0001730;gene_id=HG002_chrY_G0000552;Parent=HG002_chrY_T0001730;transcript_name=HG002_chrY_T0001730;gene_name=ENSG00000286247;ID=exon:HG002_chrY_T0001730:0;Name=ENSG00000286247;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21601068	21609434	.	-	.	source_transcript=ENST00000651369.1;source_transcript_name=ENST00000651369;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651369.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000651369.1,ENST00000651369.1;transcript_id=HG002_chrY_T0001730;gene_id=HG002_chrY_G0000552;Parent=HG002_chrY_T0001730;transcript_name=HG002_chrY_T0001730;gene_name=ENSG00000286247;ID=intron:HG002_chrY_T0001730:0;Name=ENSG00000286247;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21609435	21609492	.	-	.	source_transcript=ENST00000651369.1;source_transcript_name=ENST00000651369;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651369.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000651369.1,ENST00000651369.1;transcript_id=HG002_chrY_T0001730;gene_id=HG002_chrY_G0000552;Parent=HG002_chrY_T0001730;transcript_name=HG002_chrY_T0001730;gene_name=ENSG00000286247;ID=exon:HG002_chrY_T0001730:1;Name=ENSG00000286247;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	21600772	21602250	1000	-	.	source_transcript=ENST00000840781.1;source_transcript_name=ENST00000840781;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840781.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000840781.1,ENST00000840781.1;transcript_id=HG002_chrY_T0001731;gene_id=HG002_chrY_G0000552;Parent=HG002_chrY_G0000552;transcript_name=HG002_chrY_T0001731;gene_name=ENSG00000286247;ID=HG002_chrY_T0001731;Name=ENSG00000286247
HG002_chrY	CAT	exon	21600772	21601067	.	-	.	source_transcript=ENST00000840781.1;source_transcript_name=ENST00000840781;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000840781.1,ENST00000840781.1;transcript_id=HG002_chrY_T0001731;gene_id=HG002_chrY_G0000552;Parent=HG002_chrY_T0001731;transcript_name=HG002_chrY_T0001731;gene_name=ENSG00000286247;ID=exon:HG002_chrY_T0001731:0;Name=ENSG00000286247;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21601068	21602176	.	-	.	source_transcript=ENST00000840781.1;source_transcript_name=ENST00000840781;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000840781.1,ENST00000840781.1;transcript_id=HG002_chrY_T0001731;gene_id=HG002_chrY_G0000552;Parent=HG002_chrY_T0001731;transcript_name=HG002_chrY_T0001731;gene_name=ENSG00000286247;ID=intron:HG002_chrY_T0001731:0;Name=ENSG00000286247;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21602177	21602250	.	-	.	source_transcript=ENST00000840781.1;source_transcript_name=ENST00000840781;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000840781.1,ENST00000840781.1;transcript_id=HG002_chrY_T0001731;gene_id=HG002_chrY_G0000552;Parent=HG002_chrY_T0001731;transcript_name=HG002_chrY_T0001731;gene_name=ENSG00000286247;ID=exon:HG002_chrY_T0001731:1;Name=ENSG00000286247;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	21602224	21617866	.	+	.	source_gene_common_name=TBL1YP1;source_gene=ENSG00000225624.1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;gene_id=HG002_chrY_G0000553;gene_biotype=unprocessed_pseudogene;gene_name=TBL1YP1;gene_sources=liftoff;ID=HG002_chrY_G0000553;Name=TBL1YP1
HG002_chrY	CAT	transcript	21602224	21617866	1000	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG002_chrY_T0001732;gene_id=HG002_chrY_G0000553;Parent=HG002_chrY_G0000553;transcript_name=HG002_chrY_T0001732;gene_name=TBL1YP1;ID=HG002_chrY_T0001732;Name=TBL1YP1
HG002_chrY	CAT	exon	21602224	21602467	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG002_chrY_T0001732;gene_id=HG002_chrY_G0000553;Parent=HG002_chrY_T0001732;transcript_name=HG002_chrY_T0001732;gene_name=TBL1YP1;ID=exon:HG002_chrY_T0001732:0;Name=TBL1YP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21602468	21604370	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG002_chrY_T0001732;gene_id=HG002_chrY_G0000553;Parent=HG002_chrY_T0001732;transcript_name=HG002_chrY_T0001732;gene_name=TBL1YP1;ID=intron:HG002_chrY_T0001732:0;Name=TBL1YP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21604371	21604501	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG002_chrY_T0001732;gene_id=HG002_chrY_G0000553;Parent=HG002_chrY_T0001732;transcript_name=HG002_chrY_T0001732;gene_name=TBL1YP1;ID=exon:HG002_chrY_T0001732:1;Name=TBL1YP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21604502	21604892	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG002_chrY_T0001732;gene_id=HG002_chrY_G0000553;Parent=HG002_chrY_T0001732;transcript_name=HG002_chrY_T0001732;gene_name=TBL1YP1;ID=intron:HG002_chrY_T0001732:1;Name=TBL1YP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21604893	21605040	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG002_chrY_T0001732;gene_id=HG002_chrY_G0000553;Parent=HG002_chrY_T0001732;transcript_name=HG002_chrY_T0001732;gene_name=TBL1YP1;ID=exon:HG002_chrY_T0001732:2;Name=TBL1YP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21605041	21605738	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG002_chrY_T0001732;gene_id=HG002_chrY_G0000553;Parent=HG002_chrY_T0001732;transcript_name=HG002_chrY_T0001732;gene_name=TBL1YP1;ID=intron:HG002_chrY_T0001732:2;Name=TBL1YP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21605739	21605802	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG002_chrY_T0001732;gene_id=HG002_chrY_G0000553;Parent=HG002_chrY_T0001732;transcript_name=HG002_chrY_T0001732;gene_name=TBL1YP1;ID=exon:HG002_chrY_T0001732:3;Name=TBL1YP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21605803	21605911	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG002_chrY_T0001732;gene_id=HG002_chrY_G0000553;Parent=HG002_chrY_T0001732;transcript_name=HG002_chrY_T0001732;gene_name=TBL1YP1;ID=intron:HG002_chrY_T0001732:3;Name=TBL1YP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21605912	21606010	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG002_chrY_T0001732;gene_id=HG002_chrY_G0000553;Parent=HG002_chrY_T0001732;transcript_name=HG002_chrY_T0001732;gene_name=TBL1YP1;ID=exon:HG002_chrY_T0001732:4;Name=TBL1YP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21606011	21609048	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG002_chrY_T0001732;gene_id=HG002_chrY_G0000553;Parent=HG002_chrY_T0001732;transcript_name=HG002_chrY_T0001732;gene_name=TBL1YP1;ID=intron:HG002_chrY_T0001732:4;Name=TBL1YP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21609049	21609116	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG002_chrY_T0001732;gene_id=HG002_chrY_G0000553;Parent=HG002_chrY_T0001732;transcript_name=HG002_chrY_T0001732;gene_name=TBL1YP1;ID=exon:HG002_chrY_T0001732:5;Name=TBL1YP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21609117	21615865	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG002_chrY_T0001732;gene_id=HG002_chrY_G0000553;Parent=HG002_chrY_T0001732;transcript_name=HG002_chrY_T0001732;gene_name=TBL1YP1;ID=intron:HG002_chrY_T0001732:5;Name=TBL1YP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21615866	21615939	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG002_chrY_T0001732;gene_id=HG002_chrY_G0000553;Parent=HG002_chrY_T0001732;transcript_name=HG002_chrY_T0001732;gene_name=TBL1YP1;ID=exon:HG002_chrY_T0001732:6;Name=TBL1YP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21615940	21616276	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG002_chrY_T0001732;gene_id=HG002_chrY_G0000553;Parent=HG002_chrY_T0001732;transcript_name=HG002_chrY_T0001732;gene_name=TBL1YP1;ID=intron:HG002_chrY_T0001732:6;Name=TBL1YP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21616277	21616401	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG002_chrY_T0001732;gene_id=HG002_chrY_G0000553;Parent=HG002_chrY_T0001732;transcript_name=HG002_chrY_T0001732;gene_name=TBL1YP1;ID=exon:HG002_chrY_T0001732:7;Name=TBL1YP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21616402	21617793	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG002_chrY_T0001732;gene_id=HG002_chrY_G0000553;Parent=HG002_chrY_T0001732;transcript_name=HG002_chrY_T0001732;gene_name=TBL1YP1;ID=intron:HG002_chrY_T0001732:7;Name=TBL1YP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21617794	21617866	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG002_chrY_T0001732;gene_id=HG002_chrY_G0000553;Parent=HG002_chrY_T0001732;transcript_name=HG002_chrY_T0001732;gene_name=TBL1YP1;ID=exon:HG002_chrY_T0001732:8;Name=TBL1YP1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	21631075	21656000	.	+	.	source_gene_common_name=RPS4Y2;source_gene=ENSG00000280969.2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;gene_id=HG002_chrY_G0000554;gene_biotype=protein_coding;gene_name=RPS4Y2;gene_sources=liftoff;ID=HG002_chrY_G0000554;Name=RPS4Y2
HG002_chrY	CAT	transcript	21631075	21656000	100	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG002_chrY_T0001733;gene_id=HG002_chrY_G0000554;Parent=HG002_chrY_G0000554;transcript_name=HG002_chrY_T0001733;gene_name=RPS4Y2;ID=HG002_chrY_T0001733;Name=RPS4Y2
HG002_chrY	CAT	exon	21631075	21631133	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG002_chrY_T0001733;gene_id=HG002_chrY_G0000554;Parent=HG002_chrY_T0001733;transcript_name=HG002_chrY_T0001733;gene_name=RPS4Y2;ID=exon:HG002_chrY_T0001733:0;Name=RPS4Y2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	21631131	21631133	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG002_chrY_T0001733;gene_id=HG002_chrY_G0000554;Parent=HG002_chrY_T0001733;transcript_name=HG002_chrY_T0001733;gene_name=RPS4Y2;ID=CDS:HG002_chrY_T0001733:0;Name=RPS4Y2;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	21631131	21631133	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG002_chrY_T0001733;gene_id=HG002_chrY_G0000554;Parent=HG002_chrY_T0001733;transcript_name=HG002_chrY_T0001733;gene_name=RPS4Y2;ID=start_codon:HG002_chrY_T0001733;Name=RPS4Y2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21631134	21631744	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG002_chrY_T0001733;gene_id=HG002_chrY_G0000554;Parent=HG002_chrY_T0001733;transcript_name=HG002_chrY_T0001733;gene_name=RPS4Y2;ID=intron:HG002_chrY_T0001733:0;Name=RPS4Y2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21631745	21631822	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG002_chrY_T0001733;gene_id=HG002_chrY_G0000554;Parent=HG002_chrY_T0001733;transcript_name=HG002_chrY_T0001733;gene_name=RPS4Y2;ID=exon:HG002_chrY_T0001733:1;Name=RPS4Y2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	21631745	21631822	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG002_chrY_T0001733;gene_id=HG002_chrY_G0000554;Parent=HG002_chrY_T0001733;transcript_name=HG002_chrY_T0001733;gene_name=RPS4Y2;ID=CDS:HG002_chrY_T0001733:1;Name=RPS4Y2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21631823	21634835	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG002_chrY_T0001733;gene_id=HG002_chrY_G0000554;Parent=HG002_chrY_T0001733;transcript_name=HG002_chrY_T0001733;gene_name=RPS4Y2;ID=intron:HG002_chrY_T0001733:1;Name=RPS4Y2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21634836	21635016	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG002_chrY_T0001733;gene_id=HG002_chrY_G0000554;Parent=HG002_chrY_T0001733;transcript_name=HG002_chrY_T0001733;gene_name=RPS4Y2;ID=exon:HG002_chrY_T0001733:2;Name=RPS4Y2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	21634836	21635016	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG002_chrY_T0001733;gene_id=HG002_chrY_G0000554;Parent=HG002_chrY_T0001733;transcript_name=HG002_chrY_T0001733;gene_name=RPS4Y2;ID=CDS:HG002_chrY_T0001733:2;Name=RPS4Y2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21635017	21636251	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG002_chrY_T0001733;gene_id=HG002_chrY_G0000554;Parent=HG002_chrY_T0001733;transcript_name=HG002_chrY_T0001733;gene_name=RPS4Y2;ID=intron:HG002_chrY_T0001733:2;Name=RPS4Y2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21636252	21636349	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG002_chrY_T0001733;gene_id=HG002_chrY_G0000554;Parent=HG002_chrY_T0001733;transcript_name=HG002_chrY_T0001733;gene_name=RPS4Y2;ID=exon:HG002_chrY_T0001733:3;Name=RPS4Y2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	21636252	21636349	.	+	2	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG002_chrY_T0001733;gene_id=HG002_chrY_G0000554;Parent=HG002_chrY_T0001733;transcript_name=HG002_chrY_T0001733;gene_name=RPS4Y2;ID=CDS:HG002_chrY_T0001733:3;Name=RPS4Y2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21636350	21643772	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG002_chrY_T0001733;gene_id=HG002_chrY_G0000554;Parent=HG002_chrY_T0001733;transcript_name=HG002_chrY_T0001733;gene_name=RPS4Y2;ID=intron:HG002_chrY_T0001733:3;Name=RPS4Y2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21643773	21643944	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG002_chrY_T0001733;gene_id=HG002_chrY_G0000554;Parent=HG002_chrY_T0001733;transcript_name=HG002_chrY_T0001733;gene_name=RPS4Y2;ID=exon:HG002_chrY_T0001733:4;Name=RPS4Y2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	21643773	21643944	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG002_chrY_T0001733;gene_id=HG002_chrY_G0000554;Parent=HG002_chrY_T0001733;transcript_name=HG002_chrY_T0001733;gene_name=RPS4Y2;ID=CDS:HG002_chrY_T0001733:4;Name=RPS4Y2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21643945	21654476	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG002_chrY_T0001733;gene_id=HG002_chrY_G0000554;Parent=HG002_chrY_T0001733;transcript_name=HG002_chrY_T0001733;gene_name=RPS4Y2;ID=intron:HG002_chrY_T0001733:4;Name=RPS4Y2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21654477	21654634	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG002_chrY_T0001733;gene_id=HG002_chrY_G0000554;Parent=HG002_chrY_T0001733;transcript_name=HG002_chrY_T0001733;gene_name=RPS4Y2;ID=exon:HG002_chrY_T0001733:5;Name=RPS4Y2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	21654477	21654634	.	+	2	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG002_chrY_T0001733;gene_id=HG002_chrY_G0000554;Parent=HG002_chrY_T0001733;transcript_name=HG002_chrY_T0001733;gene_name=RPS4Y2;ID=CDS:HG002_chrY_T0001733:5;Name=RPS4Y2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21654635	21655898	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG002_chrY_T0001733;gene_id=HG002_chrY_G0000554;Parent=HG002_chrY_T0001733;transcript_name=HG002_chrY_T0001733;gene_name=RPS4Y2;ID=intron:HG002_chrY_T0001733:5;Name=RPS4Y2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21655899	21656000	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG002_chrY_T0001733;gene_id=HG002_chrY_G0000554;Parent=HG002_chrY_T0001733;transcript_name=HG002_chrY_T0001733;gene_name=RPS4Y2;ID=exon:HG002_chrY_T0001733:6;Name=RPS4Y2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	21655899	21656000	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG002_chrY_T0001733;gene_id=HG002_chrY_G0000554;Parent=HG002_chrY_T0001733;transcript_name=HG002_chrY_T0001733;gene_name=RPS4Y2;ID=CDS:HG002_chrY_T0001733:6;Name=RPS4Y2;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	21655998	21656000	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG002_chrY_T0001733;gene_id=HG002_chrY_G0000554;Parent=HG002_chrY_T0001733;transcript_name=HG002_chrY_T0001733;gene_name=RPS4Y2;ID=stop_codon:HG002_chrY_T0001733;Name=RPS4Y2;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	21683744	21686777	.	-	.	source_gene_common_name=HSFY4P;source_gene=ENSG00000224482.1;alternative_source_transcripts=ENST00000415994.1,ENST00000415994.1;gene_id=HG002_chrY_G0000555;gene_biotype=unprocessed_pseudogene;gene_name=HSFY4P;gene_sources=liftoff;ID=HG002_chrY_G0000555;Name=HSFY4P
HG002_chrY	CAT	transcript	21683744	21686777	1000	-	.	source_transcript=ENST00000415994.1;source_transcript_name=HSFY4P-201;source_gene=ENSG00000224482.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224482.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415994.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY4P;alternative_source_transcripts=ENST00000415994.1,ENST00000415994.1;transcript_id=HG002_chrY_T0001734;gene_id=HG002_chrY_G0000555;Parent=HG002_chrY_G0000555;transcript_name=HG002_chrY_T0001734;gene_name=HSFY4P;ID=HG002_chrY_T0001734;Name=HSFY4P
HG002_chrY	CAT	exon	21683744	21684433	.	-	.	source_transcript=ENST00000415994.1;source_transcript_name=HSFY4P-201;source_gene=ENSG00000224482.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224482.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415994.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY4P;alternative_source_transcripts=ENST00000415994.1,ENST00000415994.1;transcript_id=HG002_chrY_T0001734;gene_id=HG002_chrY_G0000555;Parent=HG002_chrY_T0001734;transcript_name=HG002_chrY_T0001734;gene_name=HSFY4P;ID=exon:HG002_chrY_T0001734:0;Name=HSFY4P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21684434	21686286	.	-	.	source_transcript=ENST00000415994.1;source_transcript_name=HSFY4P-201;source_gene=ENSG00000224482.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224482.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415994.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY4P;alternative_source_transcripts=ENST00000415994.1,ENST00000415994.1;transcript_id=HG002_chrY_T0001734;gene_id=HG002_chrY_G0000555;Parent=HG002_chrY_T0001734;transcript_name=HG002_chrY_T0001734;gene_name=HSFY4P;ID=intron:HG002_chrY_T0001734:0;Name=HSFY4P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21686287	21686777	.	-	.	source_transcript=ENST00000415994.1;source_transcript_name=HSFY4P-201;source_gene=ENSG00000224482.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224482.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415994.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY4P;alternative_source_transcripts=ENST00000415994.1,ENST00000415994.1;transcript_id=HG002_chrY_T0001734;gene_id=HG002_chrY_G0000555;Parent=HG002_chrY_T0001734;transcript_name=HG002_chrY_T0001734;gene_name=HSFY4P;ID=exon:HG002_chrY_T0001734:1;Name=HSFY4P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	21718234	21718688	.	-	.	source_gene_common_name=ENSG00000216844;source_gene=ENSG00000216844.1;alternative_source_transcripts=ENST00000406090.1,ENST00000406090.1;gene_id=HG002_chrY_G0000556;gene_biotype=processed_pseudogene;gene_name=ENSG00000216844;gene_sources=liftoff;ID=HG002_chrY_G0000556;Name=ENSG00000216844
HG002_chrY	CAT	transcript	21718234	21718688	1000	-	.	source_transcript=ENST00000406090.1;source_transcript_name=ENST00000406090;source_gene=ENSG00000216844.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000216844.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000406090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000406090.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000216844;alternative_source_transcripts=ENST00000406090.1,ENST00000406090.1;transcript_id=HG002_chrY_T0001735;gene_id=HG002_chrY_G0000556;Parent=HG002_chrY_G0000556;transcript_name=HG002_chrY_T0001735;gene_name=ENSG00000216844;ID=HG002_chrY_T0001735;Name=ENSG00000216844
HG002_chrY	CAT	exon	21718234	21718688	.	-	.	source_transcript=ENST00000406090.1;source_transcript_name=ENST00000406090;source_gene=ENSG00000216844.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000216844.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000406090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000406090.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000216844;alternative_source_transcripts=ENST00000406090.1,ENST00000406090.1;transcript_id=HG002_chrY_T0001735;gene_id=HG002_chrY_G0000556;Parent=HG002_chrY_T0001735;transcript_name=HG002_chrY_T0001735;gene_name=ENSG00000216844;ID=exon:HG002_chrY_T0001735:0;Name=ENSG00000216844;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	21736315	21737315	.	+	.	source_gene_common_name=GAPDHP17;source_gene=ENSG00000229551.2;alternative_source_transcripts=ENST00000449858.2,ENST00000449858.2;gene_id=HG002_chrY_G0000557;gene_biotype=processed_pseudogene;gene_name=GAPDHP17;gene_sources=liftoff;ID=HG002_chrY_G0000557;Name=GAPDHP17
HG002_chrY	CAT	transcript	21736315	21737315	1000	+	.	source_transcript=ENST00000449858.2;source_transcript_name=GAPDHP17-201;source_gene=ENSG00000229551.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229551.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000449858.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000449858.2;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GAPDHP17;alternative_source_transcripts=ENST00000449858.2,ENST00000449858.2;transcript_id=HG002_chrY_T0001736;gene_id=HG002_chrY_G0000557;Parent=HG002_chrY_G0000557;transcript_name=HG002_chrY_T0001736;gene_name=GAPDHP17;ID=HG002_chrY_T0001736;Name=GAPDHP17
HG002_chrY	CAT	exon	21736315	21737315	.	+	.	source_transcript=ENST00000449858.2;source_transcript_name=GAPDHP17-201;source_gene=ENSG00000229551.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229551.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000449858.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000449858.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GAPDHP17;alternative_source_transcripts=ENST00000449858.2,ENST00000449858.2;transcript_id=HG002_chrY_T0001736;gene_id=HG002_chrY_G0000557;Parent=HG002_chrY_T0001736;transcript_name=HG002_chrY_T0001736;gene_name=GAPDHP17;ID=exon:HG002_chrY_T0001736:0;Name=GAPDHP17;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	21782320	21782538	.	-	.	source_gene_common_name=TMEM167AP1;source_gene=ENSG00000226504.1;alternative_source_transcripts=ENST00000423409.1,ENST00000423409.1;gene_id=HG002_chrY_G0000558;gene_biotype=processed_pseudogene;gene_name=TMEM167AP1;gene_sources=liftoff;ID=HG002_chrY_G0000558;Name=TMEM167AP1
HG002_chrY	CAT	transcript	21782320	21782538	1000	-	.	source_transcript=ENST00000423409.1;source_transcript_name=TMEM167AP1-201;source_gene=ENSG00000226504.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226504.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000423409.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423409.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMEM167AP1;alternative_source_transcripts=ENST00000423409.1,ENST00000423409.1;transcript_id=HG002_chrY_T0001737;gene_id=HG002_chrY_G0000558;Parent=HG002_chrY_G0000558;transcript_name=HG002_chrY_T0001737;gene_name=TMEM167AP1;ID=HG002_chrY_T0001737;Name=TMEM167AP1
HG002_chrY	CAT	exon	21782320	21782538	.	-	.	source_transcript=ENST00000423409.1;source_transcript_name=TMEM167AP1-201;source_gene=ENSG00000226504.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226504.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000423409.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423409.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMEM167AP1;alternative_source_transcripts=ENST00000423409.1,ENST00000423409.1;transcript_id=HG002_chrY_T0001737;gene_id=HG002_chrY_G0000558;Parent=HG002_chrY_T0001737;transcript_name=HG002_chrY_T0001737;gene_name=TMEM167AP1;ID=exon:HG002_chrY_T0001737:0;Name=TMEM167AP1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	21905960	21912395	.	+	.	source_gene_common_name=ENSG00000254488;source_gene=ENSG00000254488.1;alternative_source_transcripts=ENST00000527562.1;gene_id=HG002_chrY_G0000559;gene_biotype=lncRNA;gene_name=ENSG00000254488;gene_sources=liftoff;ID=HG002_chrY_G0000559;Name=ENSG00000254488
HG002_chrY	CAT	transcript	21905960	21912395	1000	+	.	source_transcript=ENST00000527562.1;source_transcript_name=ENST00000527562;source_gene=ENSG00000254488.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000254488.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000527562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000527562.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000254488;alternative_source_transcripts=ENST00000527562.1;transcript_id=HG002_chrY_T0001738;gene_id=HG002_chrY_G0000559;Parent=HG002_chrY_G0000559;transcript_name=HG002_chrY_T0001738;gene_name=ENSG00000254488;ID=HG002_chrY_T0001738;Name=ENSG00000254488
HG002_chrY	CAT	exon	21905960	21906085	.	+	.	source_transcript=ENST00000527562.1;source_transcript_name=ENST00000527562;source_gene=ENSG00000254488.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000254488.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000527562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000527562.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000254488;alternative_source_transcripts=ENST00000527562.1;transcript_id=HG002_chrY_T0001738;gene_id=HG002_chrY_G0000559;Parent=HG002_chrY_T0001738;transcript_name=HG002_chrY_T0001738;gene_name=ENSG00000254488;ID=exon:HG002_chrY_T0001738:0;Name=ENSG00000254488;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21906086	21908314	.	+	.	source_transcript=ENST00000527562.1;source_transcript_name=ENST00000527562;source_gene=ENSG00000254488.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000254488.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000527562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000527562.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000254488;alternative_source_transcripts=ENST00000527562.1;transcript_id=HG002_chrY_T0001738;gene_id=HG002_chrY_G0000559;Parent=HG002_chrY_T0001738;transcript_name=HG002_chrY_T0001738;gene_name=ENSG00000254488;ID=intron:HG002_chrY_T0001738:0;Name=ENSG00000254488;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21908315	21908415	.	+	.	source_transcript=ENST00000527562.1;source_transcript_name=ENST00000527562;source_gene=ENSG00000254488.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000254488.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000527562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000527562.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000254488;alternative_source_transcripts=ENST00000527562.1;transcript_id=HG002_chrY_T0001738;gene_id=HG002_chrY_G0000559;Parent=HG002_chrY_T0001738;transcript_name=HG002_chrY_T0001738;gene_name=ENSG00000254488;ID=exon:HG002_chrY_T0001738:1;Name=ENSG00000254488;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	21908416	21911639	.	+	.	source_transcript=ENST00000527562.1;source_transcript_name=ENST00000527562;source_gene=ENSG00000254488.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000254488.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000527562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000527562.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000254488;alternative_source_transcripts=ENST00000527562.1;transcript_id=HG002_chrY_T0001738;gene_id=HG002_chrY_G0000559;Parent=HG002_chrY_T0001738;transcript_name=HG002_chrY_T0001738;gene_name=ENSG00000254488;ID=intron:HG002_chrY_T0001738:1;Name=ENSG00000254488;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	21911640	21912395	.	+	.	source_transcript=ENST00000527562.1;source_transcript_name=ENST00000527562;source_gene=ENSG00000254488.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000254488.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000527562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000527562.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000254488;alternative_source_transcripts=ENST00000527562.1;transcript_id=HG002_chrY_T0001738;gene_id=HG002_chrY_G0000559;Parent=HG002_chrY_T0001738;transcript_name=HG002_chrY_T0001738;gene_name=ENSG00000254488;ID=exon:HG002_chrY_T0001738:2;Name=ENSG00000254488;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22005871	22006182	.	+	.	source_gene_common_name=TOMM22P1;source_gene=ENSG00000237427.1;alternative_source_transcripts=ENST00000418578.1,ENST00000418578.1;gene_id=HG002_chrY_G0000560;gene_biotype=processed_pseudogene;gene_name=TOMM22P1;gene_sources=liftoff;ID=HG002_chrY_G0000560;Name=TOMM22P1
HG002_chrY	CAT	transcript	22005871	22006182	1000	+	.	source_transcript=ENST00000418578.1;source_transcript_name=TOMM22P1-201;source_gene=ENSG00000237427.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237427.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418578.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418578.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TOMM22P1;alternative_source_transcripts=ENST00000418578.1,ENST00000418578.1;transcript_id=HG002_chrY_T0001739;gene_id=HG002_chrY_G0000560;Parent=HG002_chrY_G0000560;transcript_name=HG002_chrY_T0001739;gene_name=TOMM22P1;ID=HG002_chrY_T0001739;Name=TOMM22P1
HG002_chrY	CAT	exon	22005871	22006182	.	+	.	source_transcript=ENST00000418578.1;source_transcript_name=TOMM22P1-201;source_gene=ENSG00000237427.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237427.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418578.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418578.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TOMM22P1;alternative_source_transcripts=ENST00000418578.1,ENST00000418578.1;transcript_id=HG002_chrY_T0001739;gene_id=HG002_chrY_G0000560;Parent=HG002_chrY_T0001739;transcript_name=HG002_chrY_T0001739;gene_name=TOMM22P1;ID=exon:HG002_chrY_T0001739:0;Name=TOMM22P1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22010248	22012868	.	-	.	source_gene_common_name=ENSG00000297760;source_gene=ENSG00000297760.1;alternative_source_transcripts=ENST00000750840.1,ENST00000750840.1;gene_id=HG002_chrY_G0000561;gene_biotype=lncRNA;gene_name=ENSG00000297760;gene_sources=liftoff;ID=HG002_chrY_G0000561;Name=ENSG00000297760
HG002_chrY	CAT	transcript	22010248	22012868	1000	-	.	source_transcript=ENST00000750840.1;source_transcript_name=ENST00000750840;source_gene=ENSG00000297760.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297760.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000750840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000750840.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297760;alternative_source_transcripts=ENST00000750840.1,ENST00000750840.1;transcript_id=HG002_chrY_T0001740;gene_id=HG002_chrY_G0000561;Parent=HG002_chrY_G0000561;transcript_name=HG002_chrY_T0001740;gene_name=ENSG00000297760;ID=HG002_chrY_T0001740;Name=ENSG00000297760
HG002_chrY	CAT	exon	22010248	22011713	.	-	.	source_transcript=ENST00000750840.1;source_transcript_name=ENST00000750840;source_gene=ENSG00000297760.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297760.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000750840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000750840.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297760;alternative_source_transcripts=ENST00000750840.1,ENST00000750840.1;transcript_id=HG002_chrY_T0001740;gene_id=HG002_chrY_G0000561;Parent=HG002_chrY_T0001740;transcript_name=HG002_chrY_T0001740;gene_name=ENSG00000297760;ID=exon:HG002_chrY_T0001740:0;Name=ENSG00000297760;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22011714	22012761	.	-	.	source_transcript=ENST00000750840.1;source_transcript_name=ENST00000750840;source_gene=ENSG00000297760.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297760.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000750840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000750840.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297760;alternative_source_transcripts=ENST00000750840.1,ENST00000750840.1;transcript_id=HG002_chrY_T0001740;gene_id=HG002_chrY_G0000561;Parent=HG002_chrY_T0001740;transcript_name=HG002_chrY_T0001740;gene_name=ENSG00000297760;ID=intron:HG002_chrY_T0001740:0;Name=ENSG00000297760;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22012762	22012868	.	-	.	source_transcript=ENST00000750840.1;source_transcript_name=ENST00000750840;source_gene=ENSG00000297760.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297760.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000750840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000750840.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297760;alternative_source_transcripts=ENST00000750840.1,ENST00000750840.1;transcript_id=HG002_chrY_T0001740;gene_id=HG002_chrY_G0000561;Parent=HG002_chrY_T0001740;transcript_name=HG002_chrY_T0001740;gene_name=ENSG00000297760;ID=exon:HG002_chrY_T0001740:1;Name=ENSG00000297760;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22013648	22132832	.	+	.	source_gene_common_name=ENSG00000289707;source_gene=ENSG00000289707.2;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;gene_id=HG002_chrY_G0000562;gene_biotype=lncRNA;gene_name=ENSG00000289707;gene_sources=liftoff;ID=HG002_chrY_G0000562;Name=ENSG00000289707
HG002_chrY	CAT	transcript	22013648	22048599	1000	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=HG002_chrY_T0001741;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_G0000562;transcript_name=HG002_chrY_T0001741;gene_name=ENSG00000289707;ID=HG002_chrY_T0001741;Name=ENSG00000289707
HG002_chrY	CAT	exon	22013648	22013883	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=HG002_chrY_T0001741;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001741;transcript_name=HG002_chrY_T0001741;gene_name=ENSG00000289707;ID=exon:HG002_chrY_T0001741:0;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22013884	22023436	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=HG002_chrY_T0001741;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001741;transcript_name=HG002_chrY_T0001741;gene_name=ENSG00000289707;ID=intron:HG002_chrY_T0001741:0;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22023437	22023531	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=HG002_chrY_T0001741;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001741;transcript_name=HG002_chrY_T0001741;gene_name=ENSG00000289707;ID=exon:HG002_chrY_T0001741:1;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22023532	22026598	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=HG002_chrY_T0001741;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001741;transcript_name=HG002_chrY_T0001741;gene_name=ENSG00000289707;ID=intron:HG002_chrY_T0001741:1;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22026599	22026652	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=HG002_chrY_T0001741;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001741;transcript_name=HG002_chrY_T0001741;gene_name=ENSG00000289707;ID=exon:HG002_chrY_T0001741:2;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22026653	22027848	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=HG002_chrY_T0001741;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001741;transcript_name=HG002_chrY_T0001741;gene_name=ENSG00000289707;ID=intron:HG002_chrY_T0001741:2;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22027849	22027983	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=HG002_chrY_T0001741;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001741;transcript_name=HG002_chrY_T0001741;gene_name=ENSG00000289707;ID=exon:HG002_chrY_T0001741:3;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22027984	22044961	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=HG002_chrY_T0001741;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001741;transcript_name=HG002_chrY_T0001741;gene_name=ENSG00000289707;ID=intron:HG002_chrY_T0001741:3;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22044962	22048599	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=HG002_chrY_T0001741;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001741;transcript_name=HG002_chrY_T0001741;gene_name=ENSG00000289707;ID=exon:HG002_chrY_T0001741:4;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	22013648	22132832	1000	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG002_chrY_T0001742;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_G0000562;transcript_name=HG002_chrY_T0001742;gene_name=ENSG00000289707;ID=HG002_chrY_T0001742;Name=ENSG00000289707
HG002_chrY	CAT	exon	22013648	22013883	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG002_chrY_T0001742;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001742;transcript_name=HG002_chrY_T0001742;gene_name=ENSG00000289707;ID=exon:HG002_chrY_T0001742:0;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22013884	22023436	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG002_chrY_T0001742;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001742;transcript_name=HG002_chrY_T0001742;gene_name=ENSG00000289707;ID=intron:HG002_chrY_T0001742:0;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22023437	22023531	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG002_chrY_T0001742;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001742;transcript_name=HG002_chrY_T0001742;gene_name=ENSG00000289707;ID=exon:HG002_chrY_T0001742:1;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22023532	22026598	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG002_chrY_T0001742;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001742;transcript_name=HG002_chrY_T0001742;gene_name=ENSG00000289707;ID=intron:HG002_chrY_T0001742:1;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22026599	22026652	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG002_chrY_T0001742;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001742;transcript_name=HG002_chrY_T0001742;gene_name=ENSG00000289707;ID=exon:HG002_chrY_T0001742:2;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22026653	22027848	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG002_chrY_T0001742;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001742;transcript_name=HG002_chrY_T0001742;gene_name=ENSG00000289707;ID=intron:HG002_chrY_T0001742:2;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22027849	22027983	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG002_chrY_T0001742;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001742;transcript_name=HG002_chrY_T0001742;gene_name=ENSG00000289707;ID=exon:HG002_chrY_T0001742:3;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22027984	22072146	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG002_chrY_T0001742;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001742;transcript_name=HG002_chrY_T0001742;gene_name=ENSG00000289707;ID=intron:HG002_chrY_T0001742:3;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22072147	22072210	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG002_chrY_T0001742;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001742;transcript_name=HG002_chrY_T0001742;gene_name=ENSG00000289707;ID=exon:HG002_chrY_T0001742:4;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22072211	22103357	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG002_chrY_T0001742;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001742;transcript_name=HG002_chrY_T0001742;gene_name=ENSG00000289707;ID=intron:HG002_chrY_T0001742:4;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22103358	22103465	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG002_chrY_T0001742;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001742;transcript_name=HG002_chrY_T0001742;gene_name=ENSG00000289707;ID=exon:HG002_chrY_T0001742:5;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22103466	22125555	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG002_chrY_T0001742;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001742;transcript_name=HG002_chrY_T0001742;gene_name=ENSG00000289707;ID=intron:HG002_chrY_T0001742:5;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22125556	22125714	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG002_chrY_T0001742;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001742;transcript_name=HG002_chrY_T0001742;gene_name=ENSG00000289707;ID=exon:HG002_chrY_T0001742:6;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22125715	22128128	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG002_chrY_T0001742;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001742;transcript_name=HG002_chrY_T0001742;gene_name=ENSG00000289707;ID=intron:HG002_chrY_T0001742:6;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22128129	22128199	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG002_chrY_T0001742;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001742;transcript_name=HG002_chrY_T0001742;gene_name=ENSG00000289707;ID=exon:HG002_chrY_T0001742:7;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22128200	22130419	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG002_chrY_T0001742;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001742;transcript_name=HG002_chrY_T0001742;gene_name=ENSG00000289707;ID=intron:HG002_chrY_T0001742:7;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22130420	22132832	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG002_chrY_T0001742;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001742;transcript_name=HG002_chrY_T0001742;gene_name=ENSG00000289707;ID=exon:HG002_chrY_T0001742:8;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	22103143	22128199	1000	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=HG002_chrY_T0001744;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_G0000562;transcript_name=HG002_chrY_T0001744;gene_name=ENSG00000289707;ID=HG002_chrY_T0001744;Name=ENSG00000289707
HG002_chrY	CAT	exon	22103143	22103180	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=HG002_chrY_T0001744;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001744;transcript_name=HG002_chrY_T0001744;gene_name=ENSG00000289707;ID=exon:HG002_chrY_T0001744:0;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22103181	22103357	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=HG002_chrY_T0001744;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001744;transcript_name=HG002_chrY_T0001744;gene_name=ENSG00000289707;ID=intron:HG002_chrY_T0001744:0;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22103358	22103465	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=HG002_chrY_T0001744;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001744;transcript_name=HG002_chrY_T0001744;gene_name=ENSG00000289707;ID=exon:HG002_chrY_T0001744:1;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22103466	22125555	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=HG002_chrY_T0001744;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001744;transcript_name=HG002_chrY_T0001744;gene_name=ENSG00000289707;ID=intron:HG002_chrY_T0001744:1;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22125556	22125714	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=HG002_chrY_T0001744;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001744;transcript_name=HG002_chrY_T0001744;gene_name=ENSG00000289707;ID=exon:HG002_chrY_T0001744:2;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22125715	22128128	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=HG002_chrY_T0001744;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001744;transcript_name=HG002_chrY_T0001744;gene_name=ENSG00000289707;ID=intron:HG002_chrY_T0001744:2;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22128129	22128199	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=HG002_chrY_T0001744;gene_id=HG002_chrY_G0000562;Parent=HG002_chrY_T0001744;transcript_name=HG002_chrY_T0001744;gene_name=ENSG00000289707;ID=exon:HG002_chrY_T0001744:3;Name=ENSG00000289707;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22096112	22097095	.	-	.	source_gene_common_name=NEFLP1;source_gene=ENSG00000232634.1;alternative_source_transcripts=ENST00000436364.1,ENST00000436364.1;gene_id=HG002_chrY_G0000563;gene_biotype=processed_pseudogene;gene_name=NEFLP1;gene_sources=liftoff;ID=HG002_chrY_G0000563;Name=NEFLP1
HG002_chrY	CAT	transcript	22096112	22097095	1000	-	.	source_transcript=ENST00000436364.1;source_transcript_name=NEFLP1-201;source_gene=ENSG00000232634.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232634.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436364.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436364.1;transcript_score=199.898;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NEFLP1;alternative_source_transcripts=ENST00000436364.1,ENST00000436364.1;transcript_id=HG002_chrY_T0001743;gene_id=HG002_chrY_G0000563;Parent=HG002_chrY_G0000563;transcript_name=HG002_chrY_T0001743;gene_name=NEFLP1;ID=HG002_chrY_T0001743;Name=NEFLP1
HG002_chrY	CAT	exon	22096112	22097095	.	-	.	source_transcript=ENST00000436364.1;source_transcript_name=NEFLP1-201;source_gene=ENSG00000232634.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232634.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436364.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436364.1;transcript_score=199.898;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NEFLP1;alternative_source_transcripts=ENST00000436364.1,ENST00000436364.1;transcript_id=HG002_chrY_T0001743;gene_id=HG002_chrY_G0000563;Parent=HG002_chrY_T0001743;transcript_name=HG002_chrY_T0001743;gene_name=NEFLP1;ID=exon:HG002_chrY_T0001743:0;Name=NEFLP1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22186269	22193896	.	+	.	source_gene_common_name=ENSG00000226918;source_gene=ENSG00000226918.1;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;gene_id=HG002_chrY_G0000564;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000226918;gene_sources=liftoff;ID=HG002_chrY_G0000564;Name=ENSG00000226918
HG002_chrY	CAT	transcript	22186269	22193896	1000	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG002_chrY_T0001745;gene_id=HG002_chrY_G0000564;Parent=HG002_chrY_G0000564;transcript_name=HG002_chrY_T0001745;gene_name=ENSG00000226918;ID=HG002_chrY_T0001745;Name=ENSG00000226918
HG002_chrY	CAT	exon	22186269	22186377	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG002_chrY_T0001745;gene_id=HG002_chrY_G0000564;Parent=HG002_chrY_T0001745;transcript_name=HG002_chrY_T0001745;gene_name=ENSG00000226918;ID=exon:HG002_chrY_T0001745:0;Name=ENSG00000226918;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22186378	22186822	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG002_chrY_T0001745;gene_id=HG002_chrY_G0000564;Parent=HG002_chrY_T0001745;transcript_name=HG002_chrY_T0001745;gene_name=ENSG00000226918;ID=intron:HG002_chrY_T0001745:0;Name=ENSG00000226918;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22186823	22187001	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG002_chrY_T0001745;gene_id=HG002_chrY_G0000564;Parent=HG002_chrY_T0001745;transcript_name=HG002_chrY_T0001745;gene_name=ENSG00000226918;ID=exon:HG002_chrY_T0001745:1;Name=ENSG00000226918;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22187002	22189178	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG002_chrY_T0001745;gene_id=HG002_chrY_G0000564;Parent=HG002_chrY_T0001745;transcript_name=HG002_chrY_T0001745;gene_name=ENSG00000226918;ID=intron:HG002_chrY_T0001745:1;Name=ENSG00000226918;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22189179	22189296	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG002_chrY_T0001745;gene_id=HG002_chrY_G0000564;Parent=HG002_chrY_T0001745;transcript_name=HG002_chrY_T0001745;gene_name=ENSG00000226918;ID=exon:HG002_chrY_T0001745:2;Name=ENSG00000226918;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22189297	22189607	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG002_chrY_T0001745;gene_id=HG002_chrY_G0000564;Parent=HG002_chrY_T0001745;transcript_name=HG002_chrY_T0001745;gene_name=ENSG00000226918;ID=intron:HG002_chrY_T0001745:2;Name=ENSG00000226918;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22189608	22189638	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG002_chrY_T0001745;gene_id=HG002_chrY_G0000564;Parent=HG002_chrY_T0001745;transcript_name=HG002_chrY_T0001745;gene_name=ENSG00000226918;ID=exon:HG002_chrY_T0001745:3;Name=ENSG00000226918;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22189639	22191634	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG002_chrY_T0001745;gene_id=HG002_chrY_G0000564;Parent=HG002_chrY_T0001745;transcript_name=HG002_chrY_T0001745;gene_name=ENSG00000226918;ID=intron:HG002_chrY_T0001745:3;Name=ENSG00000226918;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22191635	22191749	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG002_chrY_T0001745;gene_id=HG002_chrY_G0000564;Parent=HG002_chrY_T0001745;transcript_name=HG002_chrY_T0001745;gene_name=ENSG00000226918;ID=exon:HG002_chrY_T0001745:4;Name=ENSG00000226918;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22191750	22192616	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG002_chrY_T0001745;gene_id=HG002_chrY_G0000564;Parent=HG002_chrY_T0001745;transcript_name=HG002_chrY_T0001745;gene_name=ENSG00000226918;ID=intron:HG002_chrY_T0001745:4;Name=ENSG00000226918;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22192617	22192727	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG002_chrY_T0001745;gene_id=HG002_chrY_G0000564;Parent=HG002_chrY_T0001745;transcript_name=HG002_chrY_T0001745;gene_name=ENSG00000226918;ID=exon:HG002_chrY_T0001745:5;Name=ENSG00000226918;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22192728	22192808	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG002_chrY_T0001745;gene_id=HG002_chrY_G0000564;Parent=HG002_chrY_T0001745;transcript_name=HG002_chrY_T0001745;gene_name=ENSG00000226918;ID=intron:HG002_chrY_T0001745:5;Name=ENSG00000226918;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22192809	22192897	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG002_chrY_T0001745;gene_id=HG002_chrY_G0000564;Parent=HG002_chrY_T0001745;transcript_name=HG002_chrY_T0001745;gene_name=ENSG00000226918;ID=exon:HG002_chrY_T0001745:6;Name=ENSG00000226918;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22192898	22193320	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG002_chrY_T0001745;gene_id=HG002_chrY_G0000564;Parent=HG002_chrY_T0001745;transcript_name=HG002_chrY_T0001745;gene_name=ENSG00000226918;ID=intron:HG002_chrY_T0001745:6;Name=ENSG00000226918;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22193321	22193498	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG002_chrY_T0001745;gene_id=HG002_chrY_G0000564;Parent=HG002_chrY_T0001745;transcript_name=HG002_chrY_T0001745;gene_name=ENSG00000226918;ID=exon:HG002_chrY_T0001745:7;Name=ENSG00000226918;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22193499	22193774	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG002_chrY_T0001745;gene_id=HG002_chrY_G0000564;Parent=HG002_chrY_T0001745;transcript_name=HG002_chrY_T0001745;gene_name=ENSG00000226918;ID=intron:HG002_chrY_T0001745:7;Name=ENSG00000226918;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22193775	22193896	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG002_chrY_T0001745;gene_id=HG002_chrY_G0000564;Parent=HG002_chrY_T0001745;transcript_name=HG002_chrY_T0001745;gene_name=ENSG00000226918;ID=exon:HG002_chrY_T0001745:8;Name=ENSG00000226918;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22257957	22261362	.	-	.	source_gene_common_name=PRORY;source_gene=ENSG00000183146.4;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;gene_id=HG002_chrY_G0000565;gene_biotype=lncRNA;gene_name=PRORY;gene_sources=liftoff;ID=HG002_chrY_G0000565;Name=PRORY
HG002_chrY	CAT	transcript	22257957	22261362	1000	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=299.772;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=HG002_chrY_T0001746;gene_id=HG002_chrY_G0000565;Parent=HG002_chrY_G0000565;transcript_name=HG002_chrY_T0001746;gene_name=PRORY;ID=HG002_chrY_T0001746;Name=PRORY
HG002_chrY	CAT	exon	22257957	22258282	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=HG002_chrY_T0001746;gene_id=HG002_chrY_G0000565;Parent=HG002_chrY_T0001746;transcript_name=HG002_chrY_T0001746;gene_name=PRORY;ID=exon:HG002_chrY_T0001746:0;Name=PRORY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22258283	22258433	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=HG002_chrY_T0001746;gene_id=HG002_chrY_G0000565;Parent=HG002_chrY_T0001746;transcript_name=HG002_chrY_T0001746;gene_name=PRORY;ID=intron:HG002_chrY_T0001746:0;Name=PRORY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22258434	22258798	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=HG002_chrY_T0001746;gene_id=HG002_chrY_G0000565;Parent=HG002_chrY_T0001746;transcript_name=HG002_chrY_T0001746;gene_name=PRORY;ID=exon:HG002_chrY_T0001746:1;Name=PRORY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22258799	22258914	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=HG002_chrY_T0001746;gene_id=HG002_chrY_G0000565;Parent=HG002_chrY_T0001746;transcript_name=HG002_chrY_T0001746;gene_name=PRORY;ID=intron:HG002_chrY_T0001746:1;Name=PRORY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22258915	22258971	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=HG002_chrY_T0001746;gene_id=HG002_chrY_G0000565;Parent=HG002_chrY_T0001746;transcript_name=HG002_chrY_T0001746;gene_name=PRORY;ID=exon:HG002_chrY_T0001746:2;Name=PRORY;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22258972	22261233	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=HG002_chrY_T0001746;gene_id=HG002_chrY_G0000565;Parent=HG002_chrY_T0001746;transcript_name=HG002_chrY_T0001746;gene_name=PRORY;ID=intron:HG002_chrY_T0001746:2;Name=PRORY;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22261234	22261362	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=HG002_chrY_T0001746;gene_id=HG002_chrY_G0000565;Parent=HG002_chrY_T0001746;transcript_name=HG002_chrY_T0001746;gene_name=PRORY;ID=exon:HG002_chrY_T0001746:3;Name=PRORY;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22269640	22326932	.	-	.	source_gene_common_name=ENSG00000293672;source_gene=ENSG00000293672.1;gene_id=HG002_chrY_G0000566;gene_biotype=lncRNA;gene_name=ENSG00000293672;gene_sources=liftoff;ID=HG002_chrY_G0000566;Name=ENSG00000293672
HG002_chrY	CAT	transcript	22269640	22326932	1000	-	.	source_transcript=ENST00000717385.1;source_transcript_name=ENST00000717385;source_gene=ENSG00000293672.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293672.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717385.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717385.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293672;transcript_id=HG002_chrY_T0001747;gene_id=HG002_chrY_G0000566;Parent=HG002_chrY_G0000566;transcript_name=HG002_chrY_T0001747;gene_name=ENSG00000293672;ID=HG002_chrY_T0001747;Name=ENSG00000293672
HG002_chrY	CAT	exon	22269640	22270294	.	-	.	source_transcript=ENST00000717385.1;source_transcript_name=ENST00000717385;source_gene=ENSG00000293672.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293672.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717385.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293672;transcript_id=HG002_chrY_T0001747;gene_id=HG002_chrY_G0000566;Parent=HG002_chrY_T0001747;transcript_name=HG002_chrY_T0001747;gene_name=ENSG00000293672;ID=exon:HG002_chrY_T0001747:0;Name=ENSG00000293672;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22270295	22270702	.	-	.	source_transcript=ENST00000717385.1;source_transcript_name=ENST00000717385;source_gene=ENSG00000293672.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293672.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717385.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293672;transcript_id=HG002_chrY_T0001747;gene_id=HG002_chrY_G0000566;Parent=HG002_chrY_T0001747;transcript_name=HG002_chrY_T0001747;gene_name=ENSG00000293672;ID=intron:HG002_chrY_T0001747:0;Name=ENSG00000293672;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22270703	22270791	.	-	.	source_transcript=ENST00000717385.1;source_transcript_name=ENST00000717385;source_gene=ENSG00000293672.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293672.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717385.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293672;transcript_id=HG002_chrY_T0001747;gene_id=HG002_chrY_G0000566;Parent=HG002_chrY_T0001747;transcript_name=HG002_chrY_T0001747;gene_name=ENSG00000293672;ID=exon:HG002_chrY_T0001747:1;Name=ENSG00000293672;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22270792	22326647	.	-	.	source_transcript=ENST00000717385.1;source_transcript_name=ENST00000717385;source_gene=ENSG00000293672.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293672.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717385.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293672;transcript_id=HG002_chrY_T0001747;gene_id=HG002_chrY_G0000566;Parent=HG002_chrY_T0001747;transcript_name=HG002_chrY_T0001747;gene_name=ENSG00000293672;ID=intron:HG002_chrY_T0001747:1;Name=ENSG00000293672;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22326648	22326932	.	-	.	source_transcript=ENST00000717385.1;source_transcript_name=ENST00000717385;source_gene=ENSG00000293672.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293672.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717385.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293672;transcript_id=HG002_chrY_T0001747;gene_id=HG002_chrY_G0000566;Parent=HG002_chrY_T0001747;transcript_name=HG002_chrY_T0001747;gene_name=ENSG00000293672;ID=exon:HG002_chrY_T0001747:2;Name=ENSG00000293672;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22269711	22279774	.	-	.	source_gene_common_name=ENSG00000290954;source_gene=ENSG00000290954.2;gene_id=HG002_chrY_G0000567;gene_biotype=lncRNA;gene_name=ENSG00000290954;gene_sources=liftoff;ID=HG002_chrY_G0000567;Name=ENSG00000290954
HG002_chrY	CAT	transcript	22269711	22279740	1000	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG002_chrY_T0001748;gene_id=HG002_chrY_G0000567;Parent=HG002_chrY_G0000567;transcript_name=HG002_chrY_T0001748;gene_name=ENSG00000290954;ID=HG002_chrY_T0001748;Name=ENSG00000290954
HG002_chrY	CAT	exon	22269711	22270294	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG002_chrY_T0001748;gene_id=HG002_chrY_G0000567;Parent=HG002_chrY_T0001748;transcript_name=HG002_chrY_T0001748;gene_name=ENSG00000290954;ID=exon:HG002_chrY_T0001748:0;Name=ENSG00000290954;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22270295	22270702	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG002_chrY_T0001748;gene_id=HG002_chrY_G0000567;Parent=HG002_chrY_T0001748;transcript_name=HG002_chrY_T0001748;gene_name=ENSG00000290954;ID=intron:HG002_chrY_T0001748:0;Name=ENSG00000290954;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22270703	22270791	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG002_chrY_T0001748;gene_id=HG002_chrY_G0000567;Parent=HG002_chrY_T0001748;transcript_name=HG002_chrY_T0001748;gene_name=ENSG00000290954;ID=exon:HG002_chrY_T0001748:1;Name=ENSG00000290954;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22270792	22270873	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG002_chrY_T0001748;gene_id=HG002_chrY_G0000567;Parent=HG002_chrY_T0001748;transcript_name=HG002_chrY_T0001748;gene_name=ENSG00000290954;ID=intron:HG002_chrY_T0001748:1;Name=ENSG00000290954;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22270874	22270984	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG002_chrY_T0001748;gene_id=HG002_chrY_G0000567;Parent=HG002_chrY_T0001748;transcript_name=HG002_chrY_T0001748;gene_name=ENSG00000290954;ID=exon:HG002_chrY_T0001748:2;Name=ENSG00000290954;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22270985	22276479	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG002_chrY_T0001748;gene_id=HG002_chrY_G0000567;Parent=HG002_chrY_T0001748;transcript_name=HG002_chrY_T0001748;gene_name=ENSG00000290954;ID=intron:HG002_chrY_T0001748:2;Name=ENSG00000290954;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22276480	22276592	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG002_chrY_T0001748;gene_id=HG002_chrY_G0000567;Parent=HG002_chrY_T0001748;transcript_name=HG002_chrY_T0001748;gene_name=ENSG00000290954;ID=exon:HG002_chrY_T0001748:3;Name=ENSG00000290954;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22276593	22278920	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG002_chrY_T0001748;gene_id=HG002_chrY_G0000567;Parent=HG002_chrY_T0001748;transcript_name=HG002_chrY_T0001748;gene_name=ENSG00000290954;ID=intron:HG002_chrY_T0001748:3;Name=ENSG00000290954;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22278921	22278985	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG002_chrY_T0001748;gene_id=HG002_chrY_G0000567;Parent=HG002_chrY_T0001748;transcript_name=HG002_chrY_T0001748;gene_name=ENSG00000290954;ID=exon:HG002_chrY_T0001748:4;Name=ENSG00000290954;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22278986	22279631	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG002_chrY_T0001748;gene_id=HG002_chrY_G0000567;Parent=HG002_chrY_T0001748;transcript_name=HG002_chrY_T0001748;gene_name=ENSG00000290954;ID=intron:HG002_chrY_T0001748:4;Name=ENSG00000290954;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22279632	22279740	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG002_chrY_T0001748;gene_id=HG002_chrY_G0000567;Parent=HG002_chrY_T0001748;transcript_name=HG002_chrY_T0001748;gene_name=ENSG00000290954;ID=exon:HG002_chrY_T0001748:5;Name=ENSG00000290954;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	22270151	22279774	1000	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG002_chrY_T0001750;gene_id=HG002_chrY_G0000567;Parent=HG002_chrY_G0000567;transcript_name=HG002_chrY_T0001750;gene_name=ENSG00000290954;ID=HG002_chrY_T0001750;Name=ENSG00000290954
HG002_chrY	CAT	exon	22270151	22270294	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG002_chrY_T0001750;gene_id=HG002_chrY_G0000567;Parent=HG002_chrY_T0001750;transcript_name=HG002_chrY_T0001750;gene_name=ENSG00000290954;ID=exon:HG002_chrY_T0001750:0;Name=ENSG00000290954;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22270295	22270702	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG002_chrY_T0001750;gene_id=HG002_chrY_G0000567;Parent=HG002_chrY_T0001750;transcript_name=HG002_chrY_T0001750;gene_name=ENSG00000290954;ID=intron:HG002_chrY_T0001750:0;Name=ENSG00000290954;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22270703	22270791	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG002_chrY_T0001750;gene_id=HG002_chrY_G0000567;Parent=HG002_chrY_T0001750;transcript_name=HG002_chrY_T0001750;gene_name=ENSG00000290954;ID=exon:HG002_chrY_T0001750:1;Name=ENSG00000290954;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22270792	22270873	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG002_chrY_T0001750;gene_id=HG002_chrY_G0000567;Parent=HG002_chrY_T0001750;transcript_name=HG002_chrY_T0001750;gene_name=ENSG00000290954;ID=intron:HG002_chrY_T0001750:1;Name=ENSG00000290954;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22270874	22270984	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG002_chrY_T0001750;gene_id=HG002_chrY_G0000567;Parent=HG002_chrY_T0001750;transcript_name=HG002_chrY_T0001750;gene_name=ENSG00000290954;ID=exon:HG002_chrY_T0001750:2;Name=ENSG00000290954;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22270985	22275925	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG002_chrY_T0001750;gene_id=HG002_chrY_G0000567;Parent=HG002_chrY_T0001750;transcript_name=HG002_chrY_T0001750;gene_name=ENSG00000290954;ID=intron:HG002_chrY_T0001750:2;Name=ENSG00000290954;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22275926	22276029	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG002_chrY_T0001750;gene_id=HG002_chrY_G0000567;Parent=HG002_chrY_T0001750;transcript_name=HG002_chrY_T0001750;gene_name=ENSG00000290954;ID=exon:HG002_chrY_T0001750:3;Name=ENSG00000290954;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22276030	22276479	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG002_chrY_T0001750;gene_id=HG002_chrY_G0000567;Parent=HG002_chrY_T0001750;transcript_name=HG002_chrY_T0001750;gene_name=ENSG00000290954;ID=intron:HG002_chrY_T0001750:3;Name=ENSG00000290954;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22276480	22276592	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG002_chrY_T0001750;gene_id=HG002_chrY_G0000567;Parent=HG002_chrY_T0001750;transcript_name=HG002_chrY_T0001750;gene_name=ENSG00000290954;ID=exon:HG002_chrY_T0001750:4;Name=ENSG00000290954;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22276593	22279631	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG002_chrY_T0001750;gene_id=HG002_chrY_G0000567;Parent=HG002_chrY_T0001750;transcript_name=HG002_chrY_T0001750;gene_name=ENSG00000290954;ID=intron:HG002_chrY_T0001750:4;Name=ENSG00000290954;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22279632	22279774	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG002_chrY_T0001750;gene_id=HG002_chrY_G0000567;Parent=HG002_chrY_T0001750;transcript_name=HG002_chrY_T0001750;gene_name=ENSG00000290954;ID=exon:HG002_chrY_T0001750:5;Name=ENSG00000290954;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22269994	22276588	.	-	.	source_gene_common_name=RBMY2EP;source_gene=ENSG00000223637.9;gene_id=HG002_chrY_G0000568;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2EP;gene_sources=liftoff;ID=HG002_chrY_G0000568;Name=RBMY2EP
HG002_chrY	CAT	transcript	22269994	22276588	1000	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG002_chrY_T0001749;gene_id=HG002_chrY_G0000568;Parent=HG002_chrY_G0000568;transcript_name=HG002_chrY_T0001749;gene_name=RBMY2EP;ID=HG002_chrY_T0001749;Name=RBMY2EP
HG002_chrY	CAT	exon	22269994	22270294	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG002_chrY_T0001749;gene_id=HG002_chrY_G0000568;Parent=HG002_chrY_T0001749;transcript_name=HG002_chrY_T0001749;gene_name=RBMY2EP;ID=exon:HG002_chrY_T0001749:0;Name=RBMY2EP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22270295	22270702	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG002_chrY_T0001749;gene_id=HG002_chrY_G0000568;Parent=HG002_chrY_T0001749;transcript_name=HG002_chrY_T0001749;gene_name=RBMY2EP;ID=intron:HG002_chrY_T0001749:0;Name=RBMY2EP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22270703	22270791	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG002_chrY_T0001749;gene_id=HG002_chrY_G0000568;Parent=HG002_chrY_T0001749;transcript_name=HG002_chrY_T0001749;gene_name=RBMY2EP;ID=exon:HG002_chrY_T0001749:1;Name=RBMY2EP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22270792	22270873	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG002_chrY_T0001749;gene_id=HG002_chrY_G0000568;Parent=HG002_chrY_T0001749;transcript_name=HG002_chrY_T0001749;gene_name=RBMY2EP;ID=intron:HG002_chrY_T0001749:1;Name=RBMY2EP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22270874	22270984	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG002_chrY_T0001749;gene_id=HG002_chrY_G0000568;Parent=HG002_chrY_T0001749;transcript_name=HG002_chrY_T0001749;gene_name=RBMY2EP;ID=exon:HG002_chrY_T0001749:2;Name=RBMY2EP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22270985	22271348	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG002_chrY_T0001749;gene_id=HG002_chrY_G0000568;Parent=HG002_chrY_T0001749;transcript_name=HG002_chrY_T0001749;gene_name=RBMY2EP;ID=intron:HG002_chrY_T0001749:2;Name=RBMY2EP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22271349	22271459	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG002_chrY_T0001749;gene_id=HG002_chrY_G0000568;Parent=HG002_chrY_T0001749;transcript_name=HG002_chrY_T0001749;gene_name=RBMY2EP;ID=exon:HG002_chrY_T0001749:3;Name=RBMY2EP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22271460	22272340	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG002_chrY_T0001749;gene_id=HG002_chrY_G0000568;Parent=HG002_chrY_T0001749;transcript_name=HG002_chrY_T0001749;gene_name=RBMY2EP;ID=intron:HG002_chrY_T0001749:3;Name=RBMY2EP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22272341	22272455	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG002_chrY_T0001749;gene_id=HG002_chrY_G0000568;Parent=HG002_chrY_T0001749;transcript_name=HG002_chrY_T0001749;gene_name=RBMY2EP;ID=exon:HG002_chrY_T0001749:4;Name=RBMY2EP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22272456	22275925	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG002_chrY_T0001749;gene_id=HG002_chrY_G0000568;Parent=HG002_chrY_T0001749;transcript_name=HG002_chrY_T0001749;gene_name=RBMY2EP;ID=intron:HG002_chrY_T0001749:4;Name=RBMY2EP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22275926	22276029	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG002_chrY_T0001749;gene_id=HG002_chrY_G0000568;Parent=HG002_chrY_T0001749;transcript_name=HG002_chrY_T0001749;gene_name=RBMY2EP;ID=exon:HG002_chrY_T0001749:5;Name=RBMY2EP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22276030	22276479	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG002_chrY_T0001749;gene_id=HG002_chrY_G0000568;Parent=HG002_chrY_T0001749;transcript_name=HG002_chrY_T0001749;gene_name=RBMY2EP;ID=intron:HG002_chrY_T0001749:5;Name=RBMY2EP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22276480	22276588	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG002_chrY_T0001749;gene_id=HG002_chrY_G0000568;Parent=HG002_chrY_T0001749;transcript_name=HG002_chrY_T0001749;gene_name=RBMY2EP;ID=exon:HG002_chrY_T0001749:6;Name=RBMY2EP;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22280773	22280998	.	+	.	source_gene_common_name=ENSG00000236615;source_gene=ENSG00000236615.1;alternative_source_transcripts=ENST00000428616.1,ENST00000428616.1;gene_id=HG002_chrY_G0000569;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000236615;gene_sources=liftoff;ID=HG002_chrY_G0000569;Name=ENSG00000236615
HG002_chrY	CAT	transcript	22280773	22280998	1000	+	.	source_transcript=ENST00000428616.1;source_transcript_name=ENST00000428616;source_gene=ENSG00000236615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000428616.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428616.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236615;alternative_source_transcripts=ENST00000428616.1,ENST00000428616.1;transcript_id=HG002_chrY_T0001751;gene_id=HG002_chrY_G0000569;Parent=HG002_chrY_G0000569;transcript_name=HG002_chrY_T0001751;gene_name=ENSG00000236615;ID=HG002_chrY_T0001751;Name=ENSG00000236615
HG002_chrY	CAT	exon	22280773	22280998	.	+	.	source_transcript=ENST00000428616.1;source_transcript_name=ENST00000428616;source_gene=ENSG00000236615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000428616.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428616.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236615;alternative_source_transcripts=ENST00000428616.1,ENST00000428616.1;transcript_id=HG002_chrY_T0001751;gene_id=HG002_chrY_G0000569;Parent=HG002_chrY_T0001751;transcript_name=HG002_chrY_T0001751;gene_name=ENSG00000236615;ID=exon:HG002_chrY_T0001751:0;Name=ENSG00000236615;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22299031	22331220	.	-	.	source_gene_common_name=ENSG00000288057;source_gene=ENSG00000288057.2;gene_id=HG002_chrY_G0000570;gene_biotype=lncRNA;gene_name=ENSG00000288057;gene_sources=liftoff;ID=HG002_chrY_G0000570;Name=ENSG00000288057
HG002_chrY	CAT	transcript	22299031	22331220	1000	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG002_chrY_T0001752;gene_id=HG002_chrY_G0000570;Parent=HG002_chrY_G0000570;transcript_name=HG002_chrY_T0001752;gene_name=ENSG00000288057;ID=HG002_chrY_T0001752;Name=ENSG00000288057
HG002_chrY	CAT	exon	22299031	22301266	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG002_chrY_T0001752;gene_id=HG002_chrY_G0000570;Parent=HG002_chrY_T0001752;transcript_name=HG002_chrY_T0001752;gene_name=ENSG00000288057;ID=exon:HG002_chrY_T0001752:0;Name=ENSG00000288057;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22301267	22326647	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG002_chrY_T0001752;gene_id=HG002_chrY_G0000570;Parent=HG002_chrY_T0001752;transcript_name=HG002_chrY_T0001752;gene_name=ENSG00000288057;ID=intron:HG002_chrY_T0001752:0;Name=ENSG00000288057;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22326648	22326810	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG002_chrY_T0001752;gene_id=HG002_chrY_G0000570;Parent=HG002_chrY_T0001752;transcript_name=HG002_chrY_T0001752;gene_name=ENSG00000288057;ID=exon:HG002_chrY_T0001752:1;Name=ENSG00000288057;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22326811	22329526	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG002_chrY_T0001752;gene_id=HG002_chrY_G0000570;Parent=HG002_chrY_T0001752;transcript_name=HG002_chrY_T0001752;gene_name=ENSG00000288057;ID=intron:HG002_chrY_T0001752:1;Name=ENSG00000288057;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22329527	22329666	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG002_chrY_T0001752;gene_id=HG002_chrY_G0000570;Parent=HG002_chrY_T0001752;transcript_name=HG002_chrY_T0001752;gene_name=ENSG00000288057;ID=exon:HG002_chrY_T0001752:2;Name=ENSG00000288057;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22329667	22330901	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG002_chrY_T0001752;gene_id=HG002_chrY_G0000570;Parent=HG002_chrY_T0001752;transcript_name=HG002_chrY_T0001752;gene_name=ENSG00000288057;ID=intron:HG002_chrY_T0001752:2;Name=ENSG00000288057;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22330902	22331220	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG002_chrY_T0001752;gene_id=HG002_chrY_G0000570;Parent=HG002_chrY_T0001752;transcript_name=HG002_chrY_T0001752;gene_name=ENSG00000288057;ID=exon:HG002_chrY_T0001752:3;Name=ENSG00000288057;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	22300883	22326849	1000	-	.	source_transcript=ENST00000717387.1;source_transcript_name=ENST00000717387;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717387.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG002_chrY_T0001753;gene_id=HG002_chrY_G0000570;Parent=HG002_chrY_G0000570;transcript_name=HG002_chrY_T0001753;gene_name=ENSG00000288057;ID=HG002_chrY_T0001753;Name=ENSG00000288057
HG002_chrY	CAT	exon	22300883	22301266	.	-	.	source_transcript=ENST00000717387.1;source_transcript_name=ENST00000717387;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717387.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG002_chrY_T0001753;gene_id=HG002_chrY_G0000570;Parent=HG002_chrY_T0001753;transcript_name=HG002_chrY_T0001753;gene_name=ENSG00000288057;ID=exon:HG002_chrY_T0001753:0;Name=ENSG00000288057;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22301267	22306408	.	-	.	source_transcript=ENST00000717387.1;source_transcript_name=ENST00000717387;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717387.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG002_chrY_T0001753;gene_id=HG002_chrY_G0000570;Parent=HG002_chrY_T0001753;transcript_name=HG002_chrY_T0001753;gene_name=ENSG00000288057;ID=intron:HG002_chrY_T0001753:0;Name=ENSG00000288057;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22306409	22306497	.	-	.	source_transcript=ENST00000717387.1;source_transcript_name=ENST00000717387;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717387.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG002_chrY_T0001753;gene_id=HG002_chrY_G0000570;Parent=HG002_chrY_T0001753;transcript_name=HG002_chrY_T0001753;gene_name=ENSG00000288057;ID=exon:HG002_chrY_T0001753:1;Name=ENSG00000288057;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22306498	22326647	.	-	.	source_transcript=ENST00000717387.1;source_transcript_name=ENST00000717387;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717387.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG002_chrY_T0001753;gene_id=HG002_chrY_G0000570;Parent=HG002_chrY_T0001753;transcript_name=HG002_chrY_T0001753;gene_name=ENSG00000288057;ID=intron:HG002_chrY_T0001753:1;Name=ENSG00000288057;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22326648	22326849	.	-	.	source_transcript=ENST00000717387.1;source_transcript_name=ENST00000717387;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717387.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG002_chrY_T0001753;gene_id=HG002_chrY_G0000570;Parent=HG002_chrY_T0001753;transcript_name=HG002_chrY_T0001753;gene_name=ENSG00000288057;ID=exon:HG002_chrY_T0001753:2;Name=ENSG00000288057;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22305700	22312249	.	-	.	source_gene_common_name=RBMY2TP;source_gene=ENSG00000237269.1;gene_id=HG002_chrY_G0000571;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2TP;gene_sources=liftoff;ID=HG002_chrY_G0000571;Name=RBMY2TP
HG002_chrY	CAT	transcript	22305700	22312249	1000	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG002_chrY_T0001754;gene_id=HG002_chrY_G0000571;Parent=HG002_chrY_G0000571;transcript_name=HG002_chrY_T0001754;gene_name=RBMY2TP;ID=HG002_chrY_T0001754;Name=RBMY2TP
HG002_chrY	CAT	exon	22305700	22306000	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG002_chrY_T0001754;gene_id=HG002_chrY_G0000571;Parent=HG002_chrY_T0001754;transcript_name=HG002_chrY_T0001754;gene_name=RBMY2TP;ID=exon:HG002_chrY_T0001754:0;Name=RBMY2TP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22306001	22306408	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG002_chrY_T0001754;gene_id=HG002_chrY_G0000571;Parent=HG002_chrY_T0001754;transcript_name=HG002_chrY_T0001754;gene_name=RBMY2TP;ID=intron:HG002_chrY_T0001754:0;Name=RBMY2TP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22306409	22306497	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG002_chrY_T0001754;gene_id=HG002_chrY_G0000571;Parent=HG002_chrY_T0001754;transcript_name=HG002_chrY_T0001754;gene_name=RBMY2TP;ID=exon:HG002_chrY_T0001754:1;Name=RBMY2TP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22306498	22306590	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG002_chrY_T0001754;gene_id=HG002_chrY_G0000571;Parent=HG002_chrY_T0001754;transcript_name=HG002_chrY_T0001754;gene_name=RBMY2TP;ID=intron:HG002_chrY_T0001754:1;Name=RBMY2TP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22306591	22306701	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG002_chrY_T0001754;gene_id=HG002_chrY_G0000571;Parent=HG002_chrY_T0001754;transcript_name=HG002_chrY_T0001754;gene_name=RBMY2TP;ID=exon:HG002_chrY_T0001754:2;Name=RBMY2TP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22306702	22307587	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG002_chrY_T0001754;gene_id=HG002_chrY_G0000571;Parent=HG002_chrY_T0001754;transcript_name=HG002_chrY_T0001754;gene_name=RBMY2TP;ID=intron:HG002_chrY_T0001754:2;Name=RBMY2TP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22307588	22307702	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG002_chrY_T0001754;gene_id=HG002_chrY_G0000571;Parent=HG002_chrY_T0001754;transcript_name=HG002_chrY_T0001754;gene_name=RBMY2TP;ID=exon:HG002_chrY_T0001754:3;Name=RBMY2TP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22307703	22309694	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG002_chrY_T0001754;gene_id=HG002_chrY_G0000571;Parent=HG002_chrY_T0001754;transcript_name=HG002_chrY_T0001754;gene_name=RBMY2TP;ID=intron:HG002_chrY_T0001754:3;Name=RBMY2TP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22309695	22309847	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG002_chrY_T0001754;gene_id=HG002_chrY_G0000571;Parent=HG002_chrY_T0001754;transcript_name=HG002_chrY_T0001754;gene_name=RBMY2TP;ID=exon:HG002_chrY_T0001754:4;Name=RBMY2TP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22309848	22312071	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG002_chrY_T0001754;gene_id=HG002_chrY_G0000571;Parent=HG002_chrY_T0001754;transcript_name=HG002_chrY_T0001754;gene_name=RBMY2TP;ID=intron:HG002_chrY_T0001754:4;Name=RBMY2TP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22312072	22312249	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG002_chrY_T0001754;gene_id=HG002_chrY_G0000571;Parent=HG002_chrY_T0001754;transcript_name=HG002_chrY_T0001754;gene_name=RBMY2TP;ID=exon:HG002_chrY_T0001754:5;Name=RBMY2TP;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22343162	22345687	.	+	.	source_gene_common_name=TSPY14P;source_gene=ENSG00000169849.8;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;gene_id=HG002_chrY_G0000572;gene_biotype=unprocessed_pseudogene;gene_name=TSPY14P;gene_sources=liftoff;ID=HG002_chrY_G0000572;Name=TSPY14P
HG002_chrY	CAT	transcript	22343162	22345687	1000	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG002_chrY_T0001755;gene_id=HG002_chrY_G0000572;Parent=HG002_chrY_G0000572;transcript_name=HG002_chrY_T0001755;gene_name=TSPY14P;ID=HG002_chrY_T0001755;Name=TSPY14P
HG002_chrY	CAT	exon	22343162	22343635	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG002_chrY_T0001755;gene_id=HG002_chrY_G0000572;Parent=HG002_chrY_T0001755;transcript_name=HG002_chrY_T0001755;gene_name=TSPY14P;ID=exon:HG002_chrY_T0001755:0;Name=TSPY14P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22343636	22344244	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG002_chrY_T0001755;gene_id=HG002_chrY_G0000572;Parent=HG002_chrY_T0001755;transcript_name=HG002_chrY_T0001755;gene_name=TSPY14P;ID=intron:HG002_chrY_T0001755:0;Name=TSPY14P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22344245	22344322	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG002_chrY_T0001755;gene_id=HG002_chrY_G0000572;Parent=HG002_chrY_T0001755;transcript_name=HG002_chrY_T0001755;gene_name=TSPY14P;ID=exon:HG002_chrY_T0001755:1;Name=TSPY14P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22344323	22344450	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG002_chrY_T0001755;gene_id=HG002_chrY_G0000572;Parent=HG002_chrY_T0001755;transcript_name=HG002_chrY_T0001755;gene_name=TSPY14P;ID=intron:HG002_chrY_T0001755:1;Name=TSPY14P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22344451	22344562	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG002_chrY_T0001755;gene_id=HG002_chrY_G0000572;Parent=HG002_chrY_T0001755;transcript_name=HG002_chrY_T0001755;gene_name=TSPY14P;ID=exon:HG002_chrY_T0001755:2;Name=TSPY14P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22344563	22344661	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG002_chrY_T0001755;gene_id=HG002_chrY_G0000572;Parent=HG002_chrY_T0001755;transcript_name=HG002_chrY_T0001755;gene_name=TSPY14P;ID=intron:HG002_chrY_T0001755:2;Name=TSPY14P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22344662	22344807	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG002_chrY_T0001755;gene_id=HG002_chrY_G0000572;Parent=HG002_chrY_T0001755;transcript_name=HG002_chrY_T0001755;gene_name=TSPY14P;ID=exon:HG002_chrY_T0001755:3;Name=TSPY14P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22344808	22344915	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG002_chrY_T0001755;gene_id=HG002_chrY_G0000572;Parent=HG002_chrY_T0001755;transcript_name=HG002_chrY_T0001755;gene_name=TSPY14P;ID=intron:HG002_chrY_T0001755:3;Name=TSPY14P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22344916	22344997	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG002_chrY_T0001755;gene_id=HG002_chrY_G0000572;Parent=HG002_chrY_T0001755;transcript_name=HG002_chrY_T0001755;gene_name=TSPY14P;ID=exon:HG002_chrY_T0001755:4;Name=TSPY14P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22344998	22345664	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG002_chrY_T0001755;gene_id=HG002_chrY_G0000572;Parent=HG002_chrY_T0001755;transcript_name=HG002_chrY_T0001755;gene_name=TSPY14P;ID=intron:HG002_chrY_T0001755:4;Name=TSPY14P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22345665	22345687	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG002_chrY_T0001755;gene_id=HG002_chrY_G0000572;Parent=HG002_chrY_T0001755;transcript_name=HG002_chrY_T0001755;gene_name=TSPY14P;ID=exon:HG002_chrY_T0001755:5;Name=TSPY14P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22368523	22376971	.	+	.	source_gene_common_name=RBMY1HP;source_gene=ENSG00000169811.8;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;gene_id=HG002_chrY_G0000573;gene_biotype=unprocessed_pseudogene;gene_name=RBMY1HP;gene_sources=liftoff;ID=HG002_chrY_G0000573;Name=RBMY1HP
HG002_chrY	CAT	transcript	22368523	22376971	1000	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG002_chrY_T0001756;gene_id=HG002_chrY_G0000573;Parent=HG002_chrY_G0000573;transcript_name=HG002_chrY_T0001756;gene_name=RBMY1HP;ID=HG002_chrY_T0001756;Name=RBMY1HP
HG002_chrY	CAT	exon	22368523	22368700	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG002_chrY_T0001756;gene_id=HG002_chrY_G0000573;Parent=HG002_chrY_T0001756;transcript_name=HG002_chrY_T0001756;gene_name=RBMY1HP;ID=exon:HG002_chrY_T0001756:0;Name=RBMY1HP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22368701	22370613	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG002_chrY_T0001756;gene_id=HG002_chrY_G0000573;Parent=HG002_chrY_T0001756;transcript_name=HG002_chrY_T0001756;gene_name=RBMY1HP;ID=intron:HG002_chrY_T0001756:0;Name=RBMY1HP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22370614	22370766	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG002_chrY_T0001756;gene_id=HG002_chrY_G0000573;Parent=HG002_chrY_T0001756;transcript_name=HG002_chrY_T0001756;gene_name=RBMY1HP;ID=exon:HG002_chrY_T0001756:1;Name=RBMY1HP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22370767	22372776	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG002_chrY_T0001756;gene_id=HG002_chrY_G0000573;Parent=HG002_chrY_T0001756;transcript_name=HG002_chrY_T0001756;gene_name=RBMY1HP;ID=intron:HG002_chrY_T0001756:1;Name=RBMY1HP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22372777	22372891	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG002_chrY_T0001756;gene_id=HG002_chrY_G0000573;Parent=HG002_chrY_T0001756;transcript_name=HG002_chrY_T0001756;gene_name=RBMY1HP;ID=exon:HG002_chrY_T0001756:2;Name=RBMY1HP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22372892	22373846	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG002_chrY_T0001756;gene_id=HG002_chrY_G0000573;Parent=HG002_chrY_T0001756;transcript_name=HG002_chrY_T0001756;gene_name=RBMY1HP;ID=intron:HG002_chrY_T0001756:2;Name=RBMY1HP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22373847	22373957	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG002_chrY_T0001756;gene_id=HG002_chrY_G0000573;Parent=HG002_chrY_T0001756;transcript_name=HG002_chrY_T0001756;gene_name=RBMY1HP;ID=exon:HG002_chrY_T0001756:3;Name=RBMY1HP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22373958	22374398	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG002_chrY_T0001756;gene_id=HG002_chrY_G0000573;Parent=HG002_chrY_T0001756;transcript_name=HG002_chrY_T0001756;gene_name=RBMY1HP;ID=intron:HG002_chrY_T0001756:3;Name=RBMY1HP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22374399	22374509	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG002_chrY_T0001756;gene_id=HG002_chrY_G0000573;Parent=HG002_chrY_T0001756;transcript_name=HG002_chrY_T0001756;gene_name=RBMY1HP;ID=exon:HG002_chrY_T0001756:4;Name=RBMY1HP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22374510	22374943	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG002_chrY_T0001756;gene_id=HG002_chrY_G0000573;Parent=HG002_chrY_T0001756;transcript_name=HG002_chrY_T0001756;gene_name=RBMY1HP;ID=intron:HG002_chrY_T0001756:4;Name=RBMY1HP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22374944	22375054	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG002_chrY_T0001756;gene_id=HG002_chrY_G0000573;Parent=HG002_chrY_T0001756;transcript_name=HG002_chrY_T0001756;gene_name=RBMY1HP;ID=exon:HG002_chrY_T0001756:5;Name=RBMY1HP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22375055	22375487	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG002_chrY_T0001756;gene_id=HG002_chrY_G0000573;Parent=HG002_chrY_T0001756;transcript_name=HG002_chrY_T0001756;gene_name=RBMY1HP;ID=intron:HG002_chrY_T0001756:5;Name=RBMY1HP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22375488	22375598	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG002_chrY_T0001756;gene_id=HG002_chrY_G0000573;Parent=HG002_chrY_T0001756;transcript_name=HG002_chrY_T0001756;gene_name=RBMY1HP;ID=exon:HG002_chrY_T0001756:6;Name=RBMY1HP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22375599	22375975	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG002_chrY_T0001756;gene_id=HG002_chrY_G0000573;Parent=HG002_chrY_T0001756;transcript_name=HG002_chrY_T0001756;gene_name=RBMY1HP;ID=intron:HG002_chrY_T0001756:6;Name=RBMY1HP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22375976	22376086	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG002_chrY_T0001756;gene_id=HG002_chrY_G0000573;Parent=HG002_chrY_T0001756;transcript_name=HG002_chrY_T0001756;gene_name=RBMY1HP;ID=exon:HG002_chrY_T0001756:7;Name=RBMY1HP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22376087	22376172	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG002_chrY_T0001756;gene_id=HG002_chrY_G0000573;Parent=HG002_chrY_T0001756;transcript_name=HG002_chrY_T0001756;gene_name=RBMY1HP;ID=intron:HG002_chrY_T0001756:7;Name=RBMY1HP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22376173	22376261	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG002_chrY_T0001756;gene_id=HG002_chrY_G0000573;Parent=HG002_chrY_T0001756;transcript_name=HG002_chrY_T0001756;gene_name=RBMY1HP;ID=exon:HG002_chrY_T0001756:8;Name=RBMY1HP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22376262	22376672	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG002_chrY_T0001756;gene_id=HG002_chrY_G0000573;Parent=HG002_chrY_T0001756;transcript_name=HG002_chrY_T0001756;gene_name=RBMY1HP;ID=intron:HG002_chrY_T0001756:8;Name=RBMY1HP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22376673	22376971	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG002_chrY_T0001756;gene_id=HG002_chrY_G0000573;Parent=HG002_chrY_T0001756;transcript_name=HG002_chrY_T0001756;gene_name=RBMY1HP;ID=exon:HG002_chrY_T0001756:9;Name=RBMY1HP;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22383302	22385473	.	-	.	source_gene_common_name=ENSG00000242393;source_gene=ENSG00000242393.1;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;gene_id=HG002_chrY_G0000574;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000242393;gene_sources=liftoff;ID=HG002_chrY_G0000574;Name=ENSG00000242393
HG002_chrY	CAT	transcript	22383302	22385473	1000	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=299.861;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=HG002_chrY_T0001757;gene_id=HG002_chrY_G0000574;Parent=HG002_chrY_G0000574;transcript_name=HG002_chrY_T0001757;gene_name=ENSG00000242393;ID=HG002_chrY_T0001757;Name=ENSG00000242393
HG002_chrY	CAT	exon	22383302	22383349	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=HG002_chrY_T0001757;gene_id=HG002_chrY_G0000574;Parent=HG002_chrY_T0001757;transcript_name=HG002_chrY_T0001757;gene_name=ENSG00000242393;ID=exon:HG002_chrY_T0001757:0;Name=ENSG00000242393;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22383350	22383466	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=HG002_chrY_T0001757;gene_id=HG002_chrY_G0000574;Parent=HG002_chrY_T0001757;transcript_name=HG002_chrY_T0001757;gene_name=ENSG00000242393;ID=intron:HG002_chrY_T0001757:0;Name=ENSG00000242393;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22383467	22383612	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=HG002_chrY_T0001757;gene_id=HG002_chrY_G0000574;Parent=HG002_chrY_T0001757;transcript_name=HG002_chrY_T0001757;gene_name=ENSG00000242393;ID=exon:HG002_chrY_T0001757:1;Name=ENSG00000242393;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22383613	22383698	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=HG002_chrY_T0001757;gene_id=HG002_chrY_G0000574;Parent=HG002_chrY_T0001757;transcript_name=HG002_chrY_T0001757;gene_name=ENSG00000242393;ID=intron:HG002_chrY_T0001757:1;Name=ENSG00000242393;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22383699	22383762	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=HG002_chrY_T0001757;gene_id=HG002_chrY_G0000574;Parent=HG002_chrY_T0001757;transcript_name=HG002_chrY_T0001757;gene_name=ENSG00000242393;ID=exon:HG002_chrY_T0001757:2;Name=ENSG00000242393;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22383763	22384025	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=HG002_chrY_T0001757;gene_id=HG002_chrY_G0000574;Parent=HG002_chrY_T0001757;transcript_name=HG002_chrY_T0001757;gene_name=ENSG00000242393;ID=intron:HG002_chrY_T0001757:2;Name=ENSG00000242393;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22384026	22384091	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=HG002_chrY_T0001757;gene_id=HG002_chrY_G0000574;Parent=HG002_chrY_T0001757;transcript_name=HG002_chrY_T0001757;gene_name=ENSG00000242393;ID=exon:HG002_chrY_T0001757:3;Name=ENSG00000242393;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22384092	22385080	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=HG002_chrY_T0001757;gene_id=HG002_chrY_G0000574;Parent=HG002_chrY_T0001757;transcript_name=HG002_chrY_T0001757;gene_name=ENSG00000242393;ID=intron:HG002_chrY_T0001757:3;Name=ENSG00000242393;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22385081	22385473	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=HG002_chrY_T0001757;gene_id=HG002_chrY_G0000574;Parent=HG002_chrY_T0001757;transcript_name=HG002_chrY_T0001757;gene_name=ENSG00000242393;ID=exon:HG002_chrY_T0001757:4;Name=ENSG00000242393;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22386341	22400779	.	+	.	source_gene_common_name=RBMY1B;source_gene=ENSG00000242875.7;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;gene_id=HG002_chrY_G0000575;gene_biotype=protein_coding;gene_name=RBMY1B;gene_sources=liftoff;ID=HG002_chrY_G0000575;Name=RBMY1B
HG002_chrY	CAT	transcript	22386341	22400779	100	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_G0000575;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=HG002_chrY_T0001758;Name=RBMY1B
HG002_chrY	CAT	exon	22386341	22386488	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=exon:HG002_chrY_T0001758:0;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22386489	22388349	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=intron:HG002_chrY_T0001758:0;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22388350	22388462	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=exon:HG002_chrY_T0001758:1;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22388354	22388462	.	+	0	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=CDS:HG002_chrY_T0001758:0;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	22388354	22388356	.	+	0	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=start_codon:HG002_chrY_T0001758;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22388463	22388926	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=intron:HG002_chrY_T0001758:1;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22388927	22389030	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=exon:HG002_chrY_T0001758:2;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22388927	22389030	.	+	2	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=CDS:HG002_chrY_T0001758:1;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22389031	22392049	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=intron:HG002_chrY_T0001758:2;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22392050	22392227	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=exon:HG002_chrY_T0001758:3;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22392050	22392227	.	+	0	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=CDS:HG002_chrY_T0001758:2;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22392228	22394142	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=intron:HG002_chrY_T0001758:3;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22394143	22394295	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=exon:HG002_chrY_T0001758:4;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22394143	22394295	.	+	2	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=CDS:HG002_chrY_T0001758:3;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22394296	22396305	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=intron:HG002_chrY_T0001758:4;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22396306	22396420	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=exon:HG002_chrY_T0001758:5;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22396306	22396420	.	+	2	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=CDS:HG002_chrY_T0001758:4;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22396421	22397375	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=intron:HG002_chrY_T0001758:5;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22397376	22397486	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=exon:HG002_chrY_T0001758:6;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22397376	22397486	.	+	1	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=CDS:HG002_chrY_T0001758:5;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22397487	22397927	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=intron:HG002_chrY_T0001758:6;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22397928	22398038	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=exon:HG002_chrY_T0001758:7;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22397928	22398038	.	+	1	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=CDS:HG002_chrY_T0001758:6;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22398039	22398472	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=intron:HG002_chrY_T0001758:7;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22398473	22398583	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=exon:HG002_chrY_T0001758:8;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22398473	22398583	.	+	1	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=CDS:HG002_chrY_T0001758:7;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22398584	22399504	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=intron:HG002_chrY_T0001758:8;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22399505	22399615	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=exon:HG002_chrY_T0001758:9;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22399505	22399615	.	+	1	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=CDS:HG002_chrY_T0001758:8;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22399616	22399702	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=intron:HG002_chrY_T0001758:9;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22399703	22399791	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=exon:HG002_chrY_T0001758:10;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22399703	22399791	.	+	1	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=CDS:HG002_chrY_T0001758:9;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22399792	22400202	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=intron:HG002_chrY_T0001758:10;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22400203	22400779	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=exon:HG002_chrY_T0001758:11;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22400203	22400501	.	+	2	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=CDS:HG002_chrY_T0001758:10;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	22400499	22400501	.	+	0	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=HG002_chrY_T0001758;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001758;transcript_name=HG002_chrY_T0001758;gene_name=RBMY1B;ID=stop_codon:HG002_chrY_T0001758;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	22386366	22400779	1000	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG002_chrY_T0001759;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_G0000575;transcript_name=HG002_chrY_T0001759;gene_name=RBMY1B;ID=HG002_chrY_T0001759;Name=RBMY1B
HG002_chrY	CAT	exon	22386366	22386488	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG002_chrY_T0001759;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001759;transcript_name=HG002_chrY_T0001759;gene_name=RBMY1B;ID=exon:HG002_chrY_T0001759:0;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22386489	22388349	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG002_chrY_T0001759;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001759;transcript_name=HG002_chrY_T0001759;gene_name=RBMY1B;ID=intron:HG002_chrY_T0001759:0;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22388350	22388462	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG002_chrY_T0001759;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001759;transcript_name=HG002_chrY_T0001759;gene_name=RBMY1B;ID=exon:HG002_chrY_T0001759:1;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22388354	22388462	.	+	0	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG002_chrY_T0001759;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001759;transcript_name=HG002_chrY_T0001759;gene_name=RBMY1B;ID=CDS:HG002_chrY_T0001759:0;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	22388354	22388356	.	+	0	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG002_chrY_T0001759;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001759;transcript_name=HG002_chrY_T0001759;gene_name=RBMY1B;ID=start_codon:HG002_chrY_T0001759;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22388463	22388926	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG002_chrY_T0001759;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001759;transcript_name=HG002_chrY_T0001759;gene_name=RBMY1B;ID=intron:HG002_chrY_T0001759:1;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22388927	22389030	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG002_chrY_T0001759;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001759;transcript_name=HG002_chrY_T0001759;gene_name=RBMY1B;ID=exon:HG002_chrY_T0001759:2;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22388927	22389030	.	+	2	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG002_chrY_T0001759;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001759;transcript_name=HG002_chrY_T0001759;gene_name=RBMY1B;ID=CDS:HG002_chrY_T0001759:1;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22389031	22394142	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG002_chrY_T0001759;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001759;transcript_name=HG002_chrY_T0001759;gene_name=RBMY1B;ID=intron:HG002_chrY_T0001759:2;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22394143	22394295	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG002_chrY_T0001759;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001759;transcript_name=HG002_chrY_T0001759;gene_name=RBMY1B;ID=exon:HG002_chrY_T0001759:3;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22394143	22394175	.	+	0	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG002_chrY_T0001759;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001759;transcript_name=HG002_chrY_T0001759;gene_name=RBMY1B;ID=CDS:HG002_chrY_T0001759:2;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	22394173	22394175	.	+	0	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG002_chrY_T0001759;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001759;transcript_name=HG002_chrY_T0001759;gene_name=RBMY1B;ID=stop_codon:HG002_chrY_T0001759;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22394296	22396305	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG002_chrY_T0001759;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001759;transcript_name=HG002_chrY_T0001759;gene_name=RBMY1B;ID=intron:HG002_chrY_T0001759:3;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22396306	22396420	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG002_chrY_T0001759;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001759;transcript_name=HG002_chrY_T0001759;gene_name=RBMY1B;ID=exon:HG002_chrY_T0001759:4;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22396421	22397375	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG002_chrY_T0001759;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001759;transcript_name=HG002_chrY_T0001759;gene_name=RBMY1B;ID=intron:HG002_chrY_T0001759:4;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22397376	22397486	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG002_chrY_T0001759;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001759;transcript_name=HG002_chrY_T0001759;gene_name=RBMY1B;ID=exon:HG002_chrY_T0001759:5;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22397487	22397927	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG002_chrY_T0001759;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001759;transcript_name=HG002_chrY_T0001759;gene_name=RBMY1B;ID=intron:HG002_chrY_T0001759:5;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22397928	22398038	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG002_chrY_T0001759;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001759;transcript_name=HG002_chrY_T0001759;gene_name=RBMY1B;ID=exon:HG002_chrY_T0001759:6;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22398039	22398472	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG002_chrY_T0001759;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001759;transcript_name=HG002_chrY_T0001759;gene_name=RBMY1B;ID=intron:HG002_chrY_T0001759:6;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22398473	22398583	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG002_chrY_T0001759;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001759;transcript_name=HG002_chrY_T0001759;gene_name=RBMY1B;ID=exon:HG002_chrY_T0001759:7;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22398584	22399504	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG002_chrY_T0001759;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001759;transcript_name=HG002_chrY_T0001759;gene_name=RBMY1B;ID=intron:HG002_chrY_T0001759:7;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22399505	22399615	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG002_chrY_T0001759;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001759;transcript_name=HG002_chrY_T0001759;gene_name=RBMY1B;ID=exon:HG002_chrY_T0001759:8;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22399616	22399702	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG002_chrY_T0001759;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001759;transcript_name=HG002_chrY_T0001759;gene_name=RBMY1B;ID=intron:HG002_chrY_T0001759:8;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22399703	22399791	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG002_chrY_T0001759;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001759;transcript_name=HG002_chrY_T0001759;gene_name=RBMY1B;ID=exon:HG002_chrY_T0001759:9;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22399792	22400202	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG002_chrY_T0001759;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001759;transcript_name=HG002_chrY_T0001759;gene_name=RBMY1B;ID=intron:HG002_chrY_T0001759:9;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22400203	22400779	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=HG002_chrY_T0001759;gene_id=HG002_chrY_G0000575;Parent=HG002_chrY_T0001759;transcript_name=HG002_chrY_T0001759;gene_name=RBMY1B;ID=exon:HG002_chrY_T0001759:10;Name=RBMY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22406832	22409003	.	-	.	source_gene_common_name=ENSG00000228257;source_gene=ENSG00000228257.1;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;gene_id=HG002_chrY_G0000576;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000228257;gene_sources=liftoff;ID=HG002_chrY_G0000576;Name=ENSG00000228257
HG002_chrY	CAT	transcript	22406832	22409003	1000	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;transcript_id=HG002_chrY_T0001760;gene_id=HG002_chrY_G0000576;Parent=HG002_chrY_G0000576;transcript_name=HG002_chrY_T0001760;gene_name=ENSG00000228257;ID=HG002_chrY_T0001760;Name=ENSG00000228257
HG002_chrY	CAT	exon	22406832	22406879	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;transcript_id=HG002_chrY_T0001760;gene_id=HG002_chrY_G0000576;Parent=HG002_chrY_T0001760;transcript_name=HG002_chrY_T0001760;gene_name=ENSG00000228257;ID=exon:HG002_chrY_T0001760:0;Name=ENSG00000228257;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22406880	22406996	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;transcript_id=HG002_chrY_T0001760;gene_id=HG002_chrY_G0000576;Parent=HG002_chrY_T0001760;transcript_name=HG002_chrY_T0001760;gene_name=ENSG00000228257;ID=intron:HG002_chrY_T0001760:0;Name=ENSG00000228257;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22406997	22407142	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;transcript_id=HG002_chrY_T0001760;gene_id=HG002_chrY_G0000576;Parent=HG002_chrY_T0001760;transcript_name=HG002_chrY_T0001760;gene_name=ENSG00000228257;ID=exon:HG002_chrY_T0001760:1;Name=ENSG00000228257;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22407143	22407228	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;transcript_id=HG002_chrY_T0001760;gene_id=HG002_chrY_G0000576;Parent=HG002_chrY_T0001760;transcript_name=HG002_chrY_T0001760;gene_name=ENSG00000228257;ID=intron:HG002_chrY_T0001760:1;Name=ENSG00000228257;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22407229	22407292	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;transcript_id=HG002_chrY_T0001760;gene_id=HG002_chrY_G0000576;Parent=HG002_chrY_T0001760;transcript_name=HG002_chrY_T0001760;gene_name=ENSG00000228257;ID=exon:HG002_chrY_T0001760:2;Name=ENSG00000228257;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22407293	22407555	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;transcript_id=HG002_chrY_T0001760;gene_id=HG002_chrY_G0000576;Parent=HG002_chrY_T0001760;transcript_name=HG002_chrY_T0001760;gene_name=ENSG00000228257;ID=intron:HG002_chrY_T0001760:2;Name=ENSG00000228257;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22407556	22407621	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;transcript_id=HG002_chrY_T0001760;gene_id=HG002_chrY_G0000576;Parent=HG002_chrY_T0001760;transcript_name=HG002_chrY_T0001760;gene_name=ENSG00000228257;ID=exon:HG002_chrY_T0001760:3;Name=ENSG00000228257;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22407622	22408606	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;transcript_id=HG002_chrY_T0001760;gene_id=HG002_chrY_G0000576;Parent=HG002_chrY_T0001760;transcript_name=HG002_chrY_T0001760;gene_name=ENSG00000228257;ID=intron:HG002_chrY_T0001760:3;Name=ENSG00000228257;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22408607	22409003	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;transcript_id=HG002_chrY_T0001760;gene_id=HG002_chrY_G0000576;Parent=HG002_chrY_T0001760;transcript_name=HG002_chrY_T0001760;gene_name=ENSG00000228257;ID=exon:HG002_chrY_T0001760:4;Name=ENSG00000228257;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22409871	22424319	.	+	.	source_gene_common_name=RBMY1D;source_gene=ENSG00000244395.6;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;gene_id=HG002_chrY_G0000577;gene_biotype=protein_coding;gene_name=RBMY1D;gene_sources=liftoff;ID=HG002_chrY_G0000577;Name=RBMY1D
HG002_chrY	CAT	transcript	22409871	22424319	100	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_G0000577;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=HG002_chrY_T0001761;Name=RBMY1D
HG002_chrY	CAT	exon	22409871	22410018	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001761:0;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22410019	22411879	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=intron:HG002_chrY_T0001761:0;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22411880	22411992	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001761:1;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22411884	22411992	.	+	0	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=CDS:HG002_chrY_T0001761:0;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	22411884	22411886	.	+	0	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=start_codon:HG002_chrY_T0001761;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22411993	22412466	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=intron:HG002_chrY_T0001761:1;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22412467	22412570	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001761:2;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22412467	22412570	.	+	2	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=CDS:HG002_chrY_T0001761:1;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22412571	22415589	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=intron:HG002_chrY_T0001761:2;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22415590	22415767	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001761:3;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22415590	22415767	.	+	0	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=CDS:HG002_chrY_T0001761:2;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22415768	22417682	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=intron:HG002_chrY_T0001761:3;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22417683	22417835	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001761:4;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22417683	22417835	.	+	2	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=CDS:HG002_chrY_T0001761:3;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22417836	22419845	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=intron:HG002_chrY_T0001761:4;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22419846	22419960	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001761:5;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22419846	22419960	.	+	2	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=CDS:HG002_chrY_T0001761:4;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22419961	22420915	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=intron:HG002_chrY_T0001761:5;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22420916	22421026	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001761:6;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22420916	22421026	.	+	1	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=CDS:HG002_chrY_T0001761:5;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22421027	22421467	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=intron:HG002_chrY_T0001761:6;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22421468	22421578	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001761:7;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22421468	22421578	.	+	1	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=CDS:HG002_chrY_T0001761:6;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22421579	22422012	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=intron:HG002_chrY_T0001761:7;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22422013	22422123	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001761:8;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22422013	22422123	.	+	1	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=CDS:HG002_chrY_T0001761:7;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22422124	22423044	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=intron:HG002_chrY_T0001761:8;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22423045	22423155	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001761:9;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22423045	22423155	.	+	1	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=CDS:HG002_chrY_T0001761:8;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22423156	22423242	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=intron:HG002_chrY_T0001761:9;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22423243	22423331	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001761:10;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22423243	22423331	.	+	1	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=CDS:HG002_chrY_T0001761:9;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22423332	22423742	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=intron:HG002_chrY_T0001761:10;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22423743	22424319	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001761:11;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22423743	22424041	.	+	2	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=CDS:HG002_chrY_T0001761:10;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	22424039	22424041	.	+	0	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=HG002_chrY_T0001761;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001761;transcript_name=HG002_chrY_T0001761;gene_name=RBMY1D;ID=stop_codon:HG002_chrY_T0001761;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	22409896	22424319	1000	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG002_chrY_T0001762;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_G0000577;transcript_name=HG002_chrY_T0001762;gene_name=RBMY1D;ID=HG002_chrY_T0001762;Name=RBMY1D
HG002_chrY	CAT	exon	22409896	22410018	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG002_chrY_T0001762;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001762;transcript_name=HG002_chrY_T0001762;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001762:0;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22410019	22411879	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG002_chrY_T0001762;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001762;transcript_name=HG002_chrY_T0001762;gene_name=RBMY1D;ID=intron:HG002_chrY_T0001762:0;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22411880	22411992	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG002_chrY_T0001762;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001762;transcript_name=HG002_chrY_T0001762;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001762:1;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22411884	22411992	.	+	0	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG002_chrY_T0001762;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001762;transcript_name=HG002_chrY_T0001762;gene_name=RBMY1D;ID=CDS:HG002_chrY_T0001762:0;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	22411884	22411886	.	+	0	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG002_chrY_T0001762;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001762;transcript_name=HG002_chrY_T0001762;gene_name=RBMY1D;ID=start_codon:HG002_chrY_T0001762;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22411993	22412466	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG002_chrY_T0001762;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001762;transcript_name=HG002_chrY_T0001762;gene_name=RBMY1D;ID=intron:HG002_chrY_T0001762:1;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22412467	22412570	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG002_chrY_T0001762;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001762;transcript_name=HG002_chrY_T0001762;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001762:2;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22412467	22412570	.	+	2	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG002_chrY_T0001762;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001762;transcript_name=HG002_chrY_T0001762;gene_name=RBMY1D;ID=CDS:HG002_chrY_T0001762:1;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22412571	22417682	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG002_chrY_T0001762;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001762;transcript_name=HG002_chrY_T0001762;gene_name=RBMY1D;ID=intron:HG002_chrY_T0001762:2;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22417683	22417835	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG002_chrY_T0001762;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001762;transcript_name=HG002_chrY_T0001762;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001762:3;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22417683	22417715	.	+	0	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG002_chrY_T0001762;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001762;transcript_name=HG002_chrY_T0001762;gene_name=RBMY1D;ID=CDS:HG002_chrY_T0001762:2;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	22417713	22417715	.	+	0	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG002_chrY_T0001762;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001762;transcript_name=HG002_chrY_T0001762;gene_name=RBMY1D;ID=stop_codon:HG002_chrY_T0001762;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22417836	22419845	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG002_chrY_T0001762;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001762;transcript_name=HG002_chrY_T0001762;gene_name=RBMY1D;ID=intron:HG002_chrY_T0001762:3;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22419846	22419960	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG002_chrY_T0001762;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001762;transcript_name=HG002_chrY_T0001762;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001762:4;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22419961	22420915	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG002_chrY_T0001762;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001762;transcript_name=HG002_chrY_T0001762;gene_name=RBMY1D;ID=intron:HG002_chrY_T0001762:4;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22420916	22421026	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG002_chrY_T0001762;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001762;transcript_name=HG002_chrY_T0001762;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001762:5;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22421027	22421467	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG002_chrY_T0001762;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001762;transcript_name=HG002_chrY_T0001762;gene_name=RBMY1D;ID=intron:HG002_chrY_T0001762:5;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22421468	22421578	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG002_chrY_T0001762;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001762;transcript_name=HG002_chrY_T0001762;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001762:6;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22421579	22422012	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG002_chrY_T0001762;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001762;transcript_name=HG002_chrY_T0001762;gene_name=RBMY1D;ID=intron:HG002_chrY_T0001762:6;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22422013	22422123	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG002_chrY_T0001762;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001762;transcript_name=HG002_chrY_T0001762;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001762:7;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22422124	22423044	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG002_chrY_T0001762;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001762;transcript_name=HG002_chrY_T0001762;gene_name=RBMY1D;ID=intron:HG002_chrY_T0001762:7;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22423045	22423155	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG002_chrY_T0001762;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001762;transcript_name=HG002_chrY_T0001762;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001762:8;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22423156	22423242	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG002_chrY_T0001762;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001762;transcript_name=HG002_chrY_T0001762;gene_name=RBMY1D;ID=intron:HG002_chrY_T0001762:8;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22423243	22423331	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG002_chrY_T0001762;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001762;transcript_name=HG002_chrY_T0001762;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001762:9;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22423332	22423742	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG002_chrY_T0001762;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001762;transcript_name=HG002_chrY_T0001762;gene_name=RBMY1D;ID=intron:HG002_chrY_T0001762:9;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22423743	22424319	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=HG002_chrY_T0001762;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001762;transcript_name=HG002_chrY_T0001762;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001762:10;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	22409958	22424087	100	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_G0000577;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=HG002_chrY_T0001763;Name=RBMY1D
HG002_chrY	CAT	exon	22409958	22410018	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001763:0;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22410019	22411879	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=intron:HG002_chrY_T0001763:0;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22411880	22411992	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001763:1;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22411884	22411992	.	+	0	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=CDS:HG002_chrY_T0001763:0;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	22411884	22411886	.	+	0	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=start_codon:HG002_chrY_T0001763;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22411993	22412466	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=intron:HG002_chrY_T0001763:1;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22412467	22412570	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001763:2;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22412467	22412570	.	+	2	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=CDS:HG002_chrY_T0001763:1;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22412571	22415589	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=intron:HG002_chrY_T0001763:2;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22415590	22415767	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001763:3;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22415590	22415767	.	+	0	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=CDS:HG002_chrY_T0001763:2;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22415768	22417682	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=intron:HG002_chrY_T0001763:3;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22417683	22417835	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001763:4;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22417683	22417835	.	+	2	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=CDS:HG002_chrY_T0001763:3;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22417836	22419845	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=intron:HG002_chrY_T0001763:4;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22419846	22419960	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001763:5;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22419846	22419960	.	+	2	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=CDS:HG002_chrY_T0001763:4;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22419961	22420915	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=intron:HG002_chrY_T0001763:5;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22420916	22421026	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001763:6;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22420916	22421026	.	+	1	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=CDS:HG002_chrY_T0001763:5;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22421027	22421467	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=intron:HG002_chrY_T0001763:6;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22421468	22421578	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001763:7;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22421468	22421578	.	+	1	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=CDS:HG002_chrY_T0001763:6;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22421579	22422012	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=intron:HG002_chrY_T0001763:7;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22422013	22422123	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001763:8;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22422013	22422123	.	+	1	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=CDS:HG002_chrY_T0001763:7;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22422124	22423242	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=intron:HG002_chrY_T0001763:8;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22423243	22423331	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001763:9;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22423243	22423331	.	+	1	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=CDS:HG002_chrY_T0001763:8;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22423332	22423742	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=intron:HG002_chrY_T0001763:9;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22423743	22424087	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=exon:HG002_chrY_T0001763:10;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22423743	22424041	.	+	2	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=CDS:HG002_chrY_T0001763:9;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	22424039	22424041	.	+	0	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=HG002_chrY_T0001763;gene_id=HG002_chrY_G0000577;Parent=HG002_chrY_T0001763;transcript_name=HG002_chrY_T0001763;gene_name=RBMY1D;ID=stop_codon:HG002_chrY_T0001763;Name=RBMY1D;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22430843	22433062	.	-	.	source_gene_common_name=ENSG00000229725;source_gene=ENSG00000229725.1;gene_id=HG002_chrY_G0000578;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000229725;gene_sources=liftoff;ID=HG002_chrY_G0000578;Name=ENSG00000229725
HG002_chrY	CAT	transcript	22430843	22433062	1000	-	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;transcript_id=HG002_chrY_T0001764;gene_id=HG002_chrY_G0000578;Parent=HG002_chrY_G0000578;transcript_name=HG002_chrY_T0001764;gene_name=ENSG00000229725;ID=HG002_chrY_T0001764;Name=ENSG00000229725
HG002_chrY	CAT	exon	22430843	22430892	.	-	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;transcript_id=HG002_chrY_T0001764;gene_id=HG002_chrY_G0000578;Parent=HG002_chrY_T0001764;transcript_name=HG002_chrY_T0001764;gene_name=ENSG00000229725;ID=exon:HG002_chrY_T0001764:0;Name=ENSG00000229725;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22430893	22431263	.	-	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;transcript_id=HG002_chrY_T0001764;gene_id=HG002_chrY_G0000578;Parent=HG002_chrY_T0001764;transcript_name=HG002_chrY_T0001764;gene_name=ENSG00000229725;ID=intron:HG002_chrY_T0001764:0;Name=ENSG00000229725;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22431264	22431431	.	-	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;transcript_id=HG002_chrY_T0001764;gene_id=HG002_chrY_G0000578;Parent=HG002_chrY_T0001764;transcript_name=HG002_chrY_T0001764;gene_name=ENSG00000229725;ID=exon:HG002_chrY_T0001764:1;Name=ENSG00000229725;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22431432	22432675	.	-	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;transcript_id=HG002_chrY_T0001764;gene_id=HG002_chrY_G0000578;Parent=HG002_chrY_T0001764;transcript_name=HG002_chrY_T0001764;gene_name=ENSG00000229725;ID=intron:HG002_chrY_T0001764:1;Name=ENSG00000229725;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22432676	22433062	.	-	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;transcript_id=HG002_chrY_T0001764;gene_id=HG002_chrY_G0000578;Parent=HG002_chrY_T0001764;transcript_name=HG002_chrY_T0001764;gene_name=ENSG00000229725;ID=exon:HG002_chrY_T0001764:2;Name=ENSG00000229725;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22440075	22480057	.	-	.	source_gene_common_name=TTTY13;source_gene=ENSG00000184991.3;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;gene_id=HG002_chrY_G0000579;gene_biotype=lncRNA;gene_name=TTTY13;gene_sources=liftoff;ID=HG002_chrY_G0000579;Name=TTTY13
HG002_chrY	CAT	transcript	22440075	22480057	1000	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=HG002_chrY_T0001765;gene_id=HG002_chrY_G0000579;Parent=HG002_chrY_G0000579;transcript_name=HG002_chrY_T0001765;gene_name=TTTY13;ID=HG002_chrY_T0001765;Name=TTTY13
HG002_chrY	CAT	exon	22440075	22441172	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=HG002_chrY_T0001765;gene_id=HG002_chrY_G0000579;Parent=HG002_chrY_T0001765;transcript_name=HG002_chrY_T0001765;gene_name=TTTY13;ID=exon:HG002_chrY_T0001765:0;Name=TTTY13;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22441173	22441316	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=HG002_chrY_T0001765;gene_id=HG002_chrY_G0000579;Parent=HG002_chrY_T0001765;transcript_name=HG002_chrY_T0001765;gene_name=TTTY13;ID=intron:HG002_chrY_T0001765:0;Name=TTTY13;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22441317	22441391	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=HG002_chrY_T0001765;gene_id=HG002_chrY_G0000579;Parent=HG002_chrY_T0001765;transcript_name=HG002_chrY_T0001765;gene_name=TTTY13;ID=exon:HG002_chrY_T0001765:1;Name=TTTY13;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22441392	22445978	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=HG002_chrY_T0001765;gene_id=HG002_chrY_G0000579;Parent=HG002_chrY_T0001765;transcript_name=HG002_chrY_T0001765;gene_name=TTTY13;ID=intron:HG002_chrY_T0001765:1;Name=TTTY13;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22445979	22446137	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=HG002_chrY_T0001765;gene_id=HG002_chrY_G0000579;Parent=HG002_chrY_T0001765;transcript_name=HG002_chrY_T0001765;gene_name=TTTY13;ID=exon:HG002_chrY_T0001765:2;Name=TTTY13;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22446138	22458499	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=HG002_chrY_T0001765;gene_id=HG002_chrY_G0000579;Parent=HG002_chrY_T0001765;transcript_name=HG002_chrY_T0001765;gene_name=TTTY13;ID=intron:HG002_chrY_T0001765:2;Name=TTTY13;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22458500	22458641	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=HG002_chrY_T0001765;gene_id=HG002_chrY_G0000579;Parent=HG002_chrY_T0001765;transcript_name=HG002_chrY_T0001765;gene_name=TTTY13;ID=exon:HG002_chrY_T0001765:3;Name=TTTY13;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22458642	22459761	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=HG002_chrY_T0001765;gene_id=HG002_chrY_G0000579;Parent=HG002_chrY_T0001765;transcript_name=HG002_chrY_T0001765;gene_name=TTTY13;ID=intron:HG002_chrY_T0001765:3;Name=TTTY13;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22459762	22459853	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=HG002_chrY_T0001765;gene_id=HG002_chrY_G0000579;Parent=HG002_chrY_T0001765;transcript_name=HG002_chrY_T0001765;gene_name=TTTY13;ID=exon:HG002_chrY_T0001765:4;Name=TTTY13;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22459854	22462479	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=HG002_chrY_T0001765;gene_id=HG002_chrY_G0000579;Parent=HG002_chrY_T0001765;transcript_name=HG002_chrY_T0001765;gene_name=TTTY13;ID=intron:HG002_chrY_T0001765:4;Name=TTTY13;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22462480	22462641	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=HG002_chrY_T0001765;gene_id=HG002_chrY_G0000579;Parent=HG002_chrY_T0001765;transcript_name=HG002_chrY_T0001765;gene_name=TTTY13;ID=exon:HG002_chrY_T0001765:5;Name=TTTY13;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22462642	22479843	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=HG002_chrY_T0001765;gene_id=HG002_chrY_G0000579;Parent=HG002_chrY_T0001765;transcript_name=HG002_chrY_T0001765;gene_name=TTTY13;ID=intron:HG002_chrY_T0001765:5;Name=TTTY13;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22479844	22480057	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=HG002_chrY_T0001765;gene_id=HG002_chrY_G0000579;Parent=HG002_chrY_T0001765;transcript_name=HG002_chrY_T0001765;gene_name=TTTY13;ID=exon:HG002_chrY_T0001765:6;Name=TTTY13;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	22458579	22469645	1000	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=HG002_chrY_T0001766;gene_id=HG002_chrY_G0000579;Parent=HG002_chrY_G0000579;transcript_name=HG002_chrY_T0001766;gene_name=TTTY13;ID=HG002_chrY_T0001766;Name=TTTY13
HG002_chrY	CAT	exon	22458579	22458641	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=HG002_chrY_T0001766;gene_id=HG002_chrY_G0000579;Parent=HG002_chrY_T0001766;transcript_name=HG002_chrY_T0001766;gene_name=TTTY13;ID=exon:HG002_chrY_T0001766:0;Name=TTTY13;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22458642	22459761	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=HG002_chrY_T0001766;gene_id=HG002_chrY_G0000579;Parent=HG002_chrY_T0001766;transcript_name=HG002_chrY_T0001766;gene_name=TTTY13;ID=intron:HG002_chrY_T0001766:0;Name=TTTY13;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22459762	22459853	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=HG002_chrY_T0001766;gene_id=HG002_chrY_G0000579;Parent=HG002_chrY_T0001766;transcript_name=HG002_chrY_T0001766;gene_name=TTTY13;ID=exon:HG002_chrY_T0001766:1;Name=TTTY13;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22459854	22462479	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=HG002_chrY_T0001766;gene_id=HG002_chrY_G0000579;Parent=HG002_chrY_T0001766;transcript_name=HG002_chrY_T0001766;gene_name=TTTY13;ID=intron:HG002_chrY_T0001766:1;Name=TTTY13;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22462480	22462641	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=HG002_chrY_T0001766;gene_id=HG002_chrY_G0000579;Parent=HG002_chrY_T0001766;transcript_name=HG002_chrY_T0001766;gene_name=TTTY13;ID=exon:HG002_chrY_T0001766:2;Name=TTTY13;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22462642	22464250	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=HG002_chrY_T0001766;gene_id=HG002_chrY_G0000579;Parent=HG002_chrY_T0001766;transcript_name=HG002_chrY_T0001766;gene_name=TTTY13;ID=intron:HG002_chrY_T0001766:2;Name=TTTY13;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22464251	22464349	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=HG002_chrY_T0001766;gene_id=HG002_chrY_G0000579;Parent=HG002_chrY_T0001766;transcript_name=HG002_chrY_T0001766;gene_name=TTTY13;ID=exon:HG002_chrY_T0001766:3;Name=TTTY13;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22464350	22464944	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=HG002_chrY_T0001766;gene_id=HG002_chrY_G0000579;Parent=HG002_chrY_T0001766;transcript_name=HG002_chrY_T0001766;gene_name=TTTY13;ID=intron:HG002_chrY_T0001766:3;Name=TTTY13;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22464945	22465106	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=HG002_chrY_T0001766;gene_id=HG002_chrY_G0000579;Parent=HG002_chrY_T0001766;transcript_name=HG002_chrY_T0001766;gene_name=TTTY13;ID=exon:HG002_chrY_T0001766:4;Name=TTTY13;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22465107	22469564	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=HG002_chrY_T0001766;gene_id=HG002_chrY_G0000579;Parent=HG002_chrY_T0001766;transcript_name=HG002_chrY_T0001766;gene_name=TTTY13;ID=intron:HG002_chrY_T0001766:4;Name=TTTY13;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22469565	22469645	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=HG002_chrY_T0001766;gene_id=HG002_chrY_G0000579;Parent=HG002_chrY_T0001766;transcript_name=HG002_chrY_T0001766;gene_name=TTTY13;ID=exon:HG002_chrY_T0001766:5;Name=TTTY13;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22506659	22506991	.	-	.	source_gene_common_name=ELOCP5;source_gene=ENSG00000271123.1;alternative_source_transcripts=ENST00000604924.1,ENST00000604924.1;gene_id=HG002_chrY_G0000580;gene_biotype=processed_pseudogene;gene_name=ELOCP5;gene_sources=liftoff;ID=HG002_chrY_G0000580;Name=ELOCP5
HG002_chrY	CAT	transcript	22506659	22506991	1000	-	.	source_transcript=ENST00000604924.1;source_transcript_name=ELOCP5-201;source_gene=ENSG00000271123.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271123.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604924.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604924.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP5;alternative_source_transcripts=ENST00000604924.1,ENST00000604924.1;transcript_id=HG002_chrY_T0001767;gene_id=HG002_chrY_G0000580;Parent=HG002_chrY_G0000580;transcript_name=HG002_chrY_T0001767;gene_name=ELOCP5;ID=HG002_chrY_T0001767;Name=ELOCP5
HG002_chrY	CAT	exon	22506659	22506991	.	-	.	source_transcript=ENST00000604924.1;source_transcript_name=ELOCP5-201;source_gene=ENSG00000271123.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271123.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604924.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604924.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP5;alternative_source_transcripts=ENST00000604924.1,ENST00000604924.1;transcript_id=HG002_chrY_T0001767;gene_id=HG002_chrY_G0000580;Parent=HG002_chrY_T0001767;transcript_name=HG002_chrY_T0001767;gene_name=ELOCP5;ID=exon:HG002_chrY_T0001767:0;Name=ELOCP5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22512451	22514017	.	-	.	source_gene_common_name=CDY10P;source_gene=ENSG00000226042.1;alternative_source_transcripts=ENST00000452415.1,ENST00000452415.1;gene_id=HG002_chrY_G0000581;gene_biotype=unprocessed_pseudogene;gene_name=CDY10P;gene_sources=liftoff;ID=HG002_chrY_G0000581;Name=CDY10P
HG002_chrY	CAT	transcript	22512451	22514017	1000	-	.	source_transcript=ENST00000452415.1;source_transcript_name=CDY10P-201;source_gene=ENSG00000226042.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226042.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452415.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452415.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY10P;alternative_source_transcripts=ENST00000452415.1,ENST00000452415.1;transcript_id=HG002_chrY_T0001768;gene_id=HG002_chrY_G0000581;Parent=HG002_chrY_G0000581;transcript_name=HG002_chrY_T0001768;gene_name=CDY10P;ID=HG002_chrY_T0001768;Name=CDY10P
HG002_chrY	CAT	exon	22512451	22514017	.	-	.	source_transcript=ENST00000452415.1;source_transcript_name=CDY10P-201;source_gene=ENSG00000226042.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226042.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452415.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452415.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY10P;alternative_source_transcripts=ENST00000452415.1,ENST00000452415.1;transcript_id=HG002_chrY_T0001768;gene_id=HG002_chrY_G0000581;Parent=HG002_chrY_T0001768;transcript_name=HG002_chrY_T0001768;gene_name=CDY10P;ID=exon:HG002_chrY_T0001768:0;Name=CDY10P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22536902	22549234	.	+	.	source_gene_common_name=USP9YP3;source_gene=ENSG00000237023.1;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;gene_id=HG002_chrY_G0000582;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP3;gene_sources=liftoff;ID=HG002_chrY_G0000582;Name=USP9YP3
HG002_chrY	CAT	transcript	22536902	22549234	1000	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=HG002_chrY_T0001769;gene_id=HG002_chrY_G0000582;Parent=HG002_chrY_G0000582;transcript_name=HG002_chrY_T0001769;gene_name=USP9YP3;ID=HG002_chrY_T0001769;Name=USP9YP3
HG002_chrY	CAT	exon	22536902	22537118	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=HG002_chrY_T0001769;gene_id=HG002_chrY_G0000582;Parent=HG002_chrY_T0001769;transcript_name=HG002_chrY_T0001769;gene_name=USP9YP3;ID=exon:HG002_chrY_T0001769:0;Name=USP9YP3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22537119	22539737	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=HG002_chrY_T0001769;gene_id=HG002_chrY_G0000582;Parent=HG002_chrY_T0001769;transcript_name=HG002_chrY_T0001769;gene_name=USP9YP3;ID=intron:HG002_chrY_T0001769:0;Name=USP9YP3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22539738	22539952	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=HG002_chrY_T0001769;gene_id=HG002_chrY_G0000582;Parent=HG002_chrY_T0001769;transcript_name=HG002_chrY_T0001769;gene_name=USP9YP3;ID=exon:HG002_chrY_T0001769:1;Name=USP9YP3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22539953	22542073	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=HG002_chrY_T0001769;gene_id=HG002_chrY_G0000582;Parent=HG002_chrY_T0001769;transcript_name=HG002_chrY_T0001769;gene_name=USP9YP3;ID=intron:HG002_chrY_T0001769:1;Name=USP9YP3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22542074	22542251	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=HG002_chrY_T0001769;gene_id=HG002_chrY_G0000582;Parent=HG002_chrY_T0001769;transcript_name=HG002_chrY_T0001769;gene_name=USP9YP3;ID=exon:HG002_chrY_T0001769:2;Name=USP9YP3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22542252	22545058	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=HG002_chrY_T0001769;gene_id=HG002_chrY_G0000582;Parent=HG002_chrY_T0001769;transcript_name=HG002_chrY_T0001769;gene_name=USP9YP3;ID=intron:HG002_chrY_T0001769:2;Name=USP9YP3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22545059	22545185	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=HG002_chrY_T0001769;gene_id=HG002_chrY_G0000582;Parent=HG002_chrY_T0001769;transcript_name=HG002_chrY_T0001769;gene_name=USP9YP3;ID=exon:HG002_chrY_T0001769:3;Name=USP9YP3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22545186	22547795	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=HG002_chrY_T0001769;gene_id=HG002_chrY_G0000582;Parent=HG002_chrY_T0001769;transcript_name=HG002_chrY_T0001769;gene_name=USP9YP3;ID=intron:HG002_chrY_T0001769:3;Name=USP9YP3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22547796	22548699	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=HG002_chrY_T0001769;gene_id=HG002_chrY_G0000582;Parent=HG002_chrY_T0001769;transcript_name=HG002_chrY_T0001769;gene_name=USP9YP3;ID=exon:HG002_chrY_T0001769:4;Name=USP9YP3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22548700	22549109	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=HG002_chrY_T0001769;gene_id=HG002_chrY_G0000582;Parent=HG002_chrY_T0001769;transcript_name=HG002_chrY_T0001769;gene_name=USP9YP3;ID=intron:HG002_chrY_T0001769:4;Name=USP9YP3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22549110	22549234	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=HG002_chrY_T0001769;gene_id=HG002_chrY_G0000582;Parent=HG002_chrY_T0001769;transcript_name=HG002_chrY_T0001769;gene_name=USP9YP3;ID=exon:HG002_chrY_T0001769:5;Name=USP9YP3;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22552472	22556344	.	-	.	source_gene_common_name=USP9YP8;source_gene=ENSG00000229416.1;alternative_source_transcripts=ENST00000441913.1,ENST00000441913.1;gene_id=HG002_chrY_G0000583;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP8;gene_sources=liftoff;ID=HG002_chrY_G0000583;Name=USP9YP8
HG002_chrY	CAT	transcript	22552472	22556344	1000	-	.	source_transcript=ENST00000441913.1;source_transcript_name=USP9YP8-201;source_gene=ENSG00000229416.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229416.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441913.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP8;alternative_source_transcripts=ENST00000441913.1,ENST00000441913.1;transcript_id=HG002_chrY_T0001770;gene_id=HG002_chrY_G0000583;Parent=HG002_chrY_G0000583;transcript_name=HG002_chrY_T0001770;gene_name=USP9YP8;ID=HG002_chrY_T0001770;Name=USP9YP8
HG002_chrY	CAT	exon	22552472	22552661	.	-	.	source_transcript=ENST00000441913.1;source_transcript_name=USP9YP8-201;source_gene=ENSG00000229416.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229416.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441913.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP8;alternative_source_transcripts=ENST00000441913.1,ENST00000441913.1;transcript_id=HG002_chrY_T0001770;gene_id=HG002_chrY_G0000583;Parent=HG002_chrY_T0001770;transcript_name=HG002_chrY_T0001770;gene_name=USP9YP8;ID=exon:HG002_chrY_T0001770:0;Name=USP9YP8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22552662	22554225	.	-	.	source_transcript=ENST00000441913.1;source_transcript_name=USP9YP8-201;source_gene=ENSG00000229416.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229416.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441913.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP8;alternative_source_transcripts=ENST00000441913.1,ENST00000441913.1;transcript_id=HG002_chrY_T0001770;gene_id=HG002_chrY_G0000583;Parent=HG002_chrY_T0001770;transcript_name=HG002_chrY_T0001770;gene_name=USP9YP8;ID=intron:HG002_chrY_T0001770:0;Name=USP9YP8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22554226	22554449	.	-	.	source_transcript=ENST00000441913.1;source_transcript_name=USP9YP8-201;source_gene=ENSG00000229416.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229416.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441913.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP8;alternative_source_transcripts=ENST00000441913.1,ENST00000441913.1;transcript_id=HG002_chrY_T0001770;gene_id=HG002_chrY_G0000583;Parent=HG002_chrY_T0001770;transcript_name=HG002_chrY_T0001770;gene_name=USP9YP8;ID=exon:HG002_chrY_T0001770:1;Name=USP9YP8;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22554450	22556258	.	-	.	source_transcript=ENST00000441913.1;source_transcript_name=USP9YP8-201;source_gene=ENSG00000229416.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229416.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441913.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP8;alternative_source_transcripts=ENST00000441913.1,ENST00000441913.1;transcript_id=HG002_chrY_T0001770;gene_id=HG002_chrY_G0000583;Parent=HG002_chrY_T0001770;transcript_name=HG002_chrY_T0001770;gene_name=USP9YP8;ID=intron:HG002_chrY_T0001770:1;Name=USP9YP8;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22556259	22556344	.	-	.	source_transcript=ENST00000441913.1;source_transcript_name=USP9YP8-201;source_gene=ENSG00000229416.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229416.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441913.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP8;alternative_source_transcripts=ENST00000441913.1,ENST00000441913.1;transcript_id=HG002_chrY_T0001770;gene_id=HG002_chrY_G0000583;Parent=HG002_chrY_T0001770;transcript_name=HG002_chrY_T0001770;gene_name=USP9YP8;ID=exon:HG002_chrY_T0001770:2;Name=USP9YP8;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22571800	22573450	.	+	.	source_gene_common_name=CDY11P;source_gene=ENSG00000230029.1;alternative_source_transcripts=ENST00000447168.1,ENST00000447168.1;gene_id=HG002_chrY_G0000584;gene_biotype=unprocessed_pseudogene;gene_name=CDY11P;gene_sources=liftoff;ID=HG002_chrY_G0000584;Name=CDY11P
HG002_chrY	CAT	transcript	22571800	22573450	1000	+	.	source_transcript=ENST00000447168.1;source_transcript_name=CDY11P-201;source_gene=ENSG00000230029.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230029.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447168.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY11P;alternative_source_transcripts=ENST00000447168.1,ENST00000447168.1;transcript_id=HG002_chrY_T0001771;gene_id=HG002_chrY_G0000584;Parent=HG002_chrY_G0000584;transcript_name=HG002_chrY_T0001771;gene_name=CDY11P;ID=HG002_chrY_T0001771;Name=CDY11P
HG002_chrY	CAT	exon	22571800	22573450	.	+	.	source_transcript=ENST00000447168.1;source_transcript_name=CDY11P-201;source_gene=ENSG00000230029.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230029.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY11P;alternative_source_transcripts=ENST00000447168.1,ENST00000447168.1;transcript_id=HG002_chrY_T0001771;gene_id=HG002_chrY_G0000584;Parent=HG002_chrY_T0001771;transcript_name=HG002_chrY_T0001771;gene_name=CDY11P;ID=exon:HG002_chrY_T0001771:0;Name=CDY11P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22652831	22653470	.	-	.	source_gene_common_name=OFD1P16Y;source_gene=ENSG00000277519.1;alternative_source_transcripts=ENST00000620993.1;gene_id=HG002_chrY_G0000585;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P16Y;gene_sources=liftoff;ID=HG002_chrY_G0000585;Name=OFD1P16Y
HG002_chrY	CAT	transcript	22652831	22653470	1000	-	.	source_transcript=ENST00000620993.1;source_transcript_name=OFD1P16Y-201;source_gene=ENSG00000277519.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000277519.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000620993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000620993.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P16Y;alternative_source_transcripts=ENST00000620993.1;transcript_id=HG002_chrY_T0001772;gene_id=HG002_chrY_G0000585;Parent=HG002_chrY_G0000585;transcript_name=HG002_chrY_T0001772;gene_name=OFD1P16Y;ID=HG002_chrY_T0001772;Name=OFD1P16Y
HG002_chrY	CAT	exon	22652831	22653007	.	-	.	source_transcript=ENST00000620993.1;source_transcript_name=OFD1P16Y-201;source_gene=ENSG00000277519.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000277519.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000620993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000620993.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P16Y;alternative_source_transcripts=ENST00000620993.1;transcript_id=HG002_chrY_T0001772;gene_id=HG002_chrY_G0000585;Parent=HG002_chrY_T0001772;transcript_name=HG002_chrY_T0001772;gene_name=OFD1P16Y;ID=exon:HG002_chrY_T0001772:0;Name=OFD1P16Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22653008	22653329	.	-	.	source_transcript=ENST00000620993.1;source_transcript_name=OFD1P16Y-201;source_gene=ENSG00000277519.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000277519.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000620993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000620993.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P16Y;alternative_source_transcripts=ENST00000620993.1;transcript_id=HG002_chrY_T0001772;gene_id=HG002_chrY_G0000585;Parent=HG002_chrY_T0001772;transcript_name=HG002_chrY_T0001772;gene_name=OFD1P16Y;ID=intron:HG002_chrY_T0001772:0;Name=OFD1P16Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22653330	22653470	.	-	.	source_transcript=ENST00000620993.1;source_transcript_name=OFD1P16Y-201;source_gene=ENSG00000277519.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000277519.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000620993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000620993.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P16Y;alternative_source_transcripts=ENST00000620993.1;transcript_id=HG002_chrY_T0001772;gene_id=HG002_chrY_G0000585;Parent=HG002_chrY_T0001772;transcript_name=HG002_chrY_T0001772;gene_name=OFD1P16Y;ID=exon:HG002_chrY_T0001772:1;Name=OFD1P16Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22660510	22681971	.	+	.	source_gene_common_name=ENSG00000286187;source_gene=ENSG00000286187.2;alternative_source_transcripts=ENST00000807569.1;gene_id=HG002_chrY_G0000586;gene_biotype=lncRNA;gene_name=ENSG00000286187;gene_sources=liftoff;ID=HG002_chrY_G0000586;Name=ENSG00000286187
HG002_chrY	CAT	transcript	22660510	22674421	1000	+	.	source_transcript=ENST00000807569.1;source_transcript_name=ENST00000807569;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807569.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807569.1;transcript_id=HG002_chrY_T0001773;gene_id=HG002_chrY_G0000586;Parent=HG002_chrY_G0000586;transcript_name=HG002_chrY_T0001773;gene_name=ENSG00000286187;ID=HG002_chrY_T0001773;Name=ENSG00000286187
HG002_chrY	CAT	exon	22660510	22660828	.	+	.	source_transcript=ENST00000807569.1;source_transcript_name=ENST00000807569;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807569.1;transcript_id=HG002_chrY_T0001773;gene_id=HG002_chrY_G0000586;Parent=HG002_chrY_T0001773;transcript_name=HG002_chrY_T0001773;gene_name=ENSG00000286187;ID=exon:HG002_chrY_T0001773:0;Name=ENSG00000286187;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22660829	22673929	.	+	.	source_transcript=ENST00000807569.1;source_transcript_name=ENST00000807569;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807569.1;transcript_id=HG002_chrY_T0001773;gene_id=HG002_chrY_G0000586;Parent=HG002_chrY_T0001773;transcript_name=HG002_chrY_T0001773;gene_name=ENSG00000286187;ID=intron:HG002_chrY_T0001773:0;Name=ENSG00000286187;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22673930	22674089	.	+	.	source_transcript=ENST00000807569.1;source_transcript_name=ENST00000807569;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807569.1;transcript_id=HG002_chrY_T0001773;gene_id=HG002_chrY_G0000586;Parent=HG002_chrY_T0001773;transcript_name=HG002_chrY_T0001773;gene_name=ENSG00000286187;ID=exon:HG002_chrY_T0001773:1;Name=ENSG00000286187;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22674090	22674249	.	+	.	source_transcript=ENST00000807569.1;source_transcript_name=ENST00000807569;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807569.1;transcript_id=HG002_chrY_T0001773;gene_id=HG002_chrY_G0000586;Parent=HG002_chrY_T0001773;transcript_name=HG002_chrY_T0001773;gene_name=ENSG00000286187;ID=intron:HG002_chrY_T0001773:1;Name=ENSG00000286187;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22674250	22674421	.	+	.	source_transcript=ENST00000807569.1;source_transcript_name=ENST00000807569;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807569.1;transcript_id=HG002_chrY_T0001773;gene_id=HG002_chrY_G0000586;Parent=HG002_chrY_T0001773;transcript_name=HG002_chrY_T0001773;gene_name=ENSG00000286187;ID=exon:HG002_chrY_T0001773:2;Name=ENSG00000286187;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	22660541	22681971	1000	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=299.986;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG002_chrY_T0001774;gene_id=HG002_chrY_G0000586;Parent=HG002_chrY_G0000586;transcript_name=HG002_chrY_T0001774;gene_name=ENSG00000286187;ID=HG002_chrY_T0001774;Name=ENSG00000286187
HG002_chrY	CAT	exon	22660541	22660828	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=299.986;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG002_chrY_T0001774;gene_id=HG002_chrY_G0000586;Parent=HG002_chrY_T0001774;transcript_name=HG002_chrY_T0001774;gene_name=ENSG00000286187;ID=exon:HG002_chrY_T0001774:0;Name=ENSG00000286187;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22660829	22672451	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=299.986;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG002_chrY_T0001774;gene_id=HG002_chrY_G0000586;Parent=HG002_chrY_T0001774;transcript_name=HG002_chrY_T0001774;gene_name=ENSG00000286187;ID=intron:HG002_chrY_T0001774:0;Name=ENSG00000286187;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22672452	22672757	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=299.986;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG002_chrY_T0001774;gene_id=HG002_chrY_G0000586;Parent=HG002_chrY_T0001774;transcript_name=HG002_chrY_T0001774;gene_name=ENSG00000286187;ID=exon:HG002_chrY_T0001774:1;Name=ENSG00000286187;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22672758	22673929	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=299.986;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG002_chrY_T0001774;gene_id=HG002_chrY_G0000586;Parent=HG002_chrY_T0001774;transcript_name=HG002_chrY_T0001774;gene_name=ENSG00000286187;ID=intron:HG002_chrY_T0001774:1;Name=ENSG00000286187;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22673930	22674089	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=299.986;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG002_chrY_T0001774;gene_id=HG002_chrY_G0000586;Parent=HG002_chrY_T0001774;transcript_name=HG002_chrY_T0001774;gene_name=ENSG00000286187;ID=exon:HG002_chrY_T0001774:2;Name=ENSG00000286187;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22674090	22674249	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=299.986;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG002_chrY_T0001774;gene_id=HG002_chrY_G0000586;Parent=HG002_chrY_T0001774;transcript_name=HG002_chrY_T0001774;gene_name=ENSG00000286187;ID=intron:HG002_chrY_T0001774:2;Name=ENSG00000286187;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22674250	22676415	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=299.986;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG002_chrY_T0001774;gene_id=HG002_chrY_G0000586;Parent=HG002_chrY_T0001774;transcript_name=HG002_chrY_T0001774;gene_name=ENSG00000286187;ID=exon:HG002_chrY_T0001774:3;Name=ENSG00000286187;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22676416	22676598	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=299.986;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG002_chrY_T0001774;gene_id=HG002_chrY_G0000586;Parent=HG002_chrY_T0001774;transcript_name=HG002_chrY_T0001774;gene_name=ENSG00000286187;ID=intron:HG002_chrY_T0001774:3;Name=ENSG00000286187;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22676599	22676760	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=299.986;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG002_chrY_T0001774;gene_id=HG002_chrY_G0000586;Parent=HG002_chrY_T0001774;transcript_name=HG002_chrY_T0001774;gene_name=ENSG00000286187;ID=exon:HG002_chrY_T0001774:4;Name=ENSG00000286187;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22676761	22677413	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=299.986;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG002_chrY_T0001774;gene_id=HG002_chrY_G0000586;Parent=HG002_chrY_T0001774;transcript_name=HG002_chrY_T0001774;gene_name=ENSG00000286187;ID=intron:HG002_chrY_T0001774:4;Name=ENSG00000286187;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22677414	22678778	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=299.986;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG002_chrY_T0001774;gene_id=HG002_chrY_G0000586;Parent=HG002_chrY_T0001774;transcript_name=HG002_chrY_T0001774;gene_name=ENSG00000286187;ID=exon:HG002_chrY_T0001774:5;Name=ENSG00000286187;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22678779	22679065	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=299.986;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG002_chrY_T0001774;gene_id=HG002_chrY_G0000586;Parent=HG002_chrY_T0001774;transcript_name=HG002_chrY_T0001774;gene_name=ENSG00000286187;ID=intron:HG002_chrY_T0001774:5;Name=ENSG00000286187;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22679066	22681971	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=299.986;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG002_chrY_T0001774;gene_id=HG002_chrY_G0000586;Parent=HG002_chrY_T0001774;transcript_name=HG002_chrY_T0001774;gene_name=ENSG00000286187;ID=exon:HG002_chrY_T0001774:6;Name=ENSG00000286187;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	22672305	22674415	1000	+	.	source_transcript=ENST00000807570.1;source_transcript_name=ENST00000807570;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807570.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807570.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807570.1;transcript_id=HG002_chrY_T0001775;gene_id=HG002_chrY_G0000586;Parent=HG002_chrY_G0000586;transcript_name=HG002_chrY_T0001775;gene_name=ENSG00000286187;ID=HG002_chrY_T0001775;Name=ENSG00000286187
HG002_chrY	CAT	exon	22672305	22672757	.	+	.	source_transcript=ENST00000807570.1;source_transcript_name=ENST00000807570;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807570.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807570.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807570.1;transcript_id=HG002_chrY_T0001775;gene_id=HG002_chrY_G0000586;Parent=HG002_chrY_T0001775;transcript_name=HG002_chrY_T0001775;gene_name=ENSG00000286187;ID=exon:HG002_chrY_T0001775:0;Name=ENSG00000286187;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22672758	22673929	.	+	.	source_transcript=ENST00000807570.1;source_transcript_name=ENST00000807570;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807570.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807570.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807570.1;transcript_id=HG002_chrY_T0001775;gene_id=HG002_chrY_G0000586;Parent=HG002_chrY_T0001775;transcript_name=HG002_chrY_T0001775;gene_name=ENSG00000286187;ID=intron:HG002_chrY_T0001775:0;Name=ENSG00000286187;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22673930	22674089	.	+	.	source_transcript=ENST00000807570.1;source_transcript_name=ENST00000807570;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807570.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807570.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807570.1;transcript_id=HG002_chrY_T0001775;gene_id=HG002_chrY_G0000586;Parent=HG002_chrY_T0001775;transcript_name=HG002_chrY_T0001775;gene_name=ENSG00000286187;ID=exon:HG002_chrY_T0001775:1;Name=ENSG00000286187;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22674090	22674249	.	+	.	source_transcript=ENST00000807570.1;source_transcript_name=ENST00000807570;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807570.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807570.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807570.1;transcript_id=HG002_chrY_T0001775;gene_id=HG002_chrY_G0000586;Parent=HG002_chrY_T0001775;transcript_name=HG002_chrY_T0001775;gene_name=ENSG00000286187;ID=intron:HG002_chrY_T0001775:1;Name=ENSG00000286187;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22674250	22674415	.	+	.	source_transcript=ENST00000807570.1;source_transcript_name=ENST00000807570;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807570.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807570.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807570.1;transcript_id=HG002_chrY_T0001775;gene_id=HG002_chrY_G0000586;Parent=HG002_chrY_T0001775;transcript_name=HG002_chrY_T0001775;gene_name=ENSG00000286187;ID=exon:HG002_chrY_T0001775:2;Name=ENSG00000286187;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22706587	22708806	.	+	.	source_gene_common_name=ENSG00000229725;source_gene=ENSG00000229725.1;alternative_source_transcripts=ENST00000414540.1;gene_id=HG002_chrY_G0000587;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000229725;gene_sources=liftoff;ID=HG002_chrY_G0000587;Name=ENSG00000229725
HG002_chrY	CAT	transcript	22706587	22708806	1000	+	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1;transcript_id=HG002_chrY_T0001776;gene_id=HG002_chrY_G0000587;Parent=HG002_chrY_G0000587;transcript_name=HG002_chrY_T0001776;gene_name=ENSG00000229725;ID=HG002_chrY_T0001776;Name=ENSG00000229725
HG002_chrY	CAT	exon	22706587	22706973	.	+	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1;transcript_id=HG002_chrY_T0001776;gene_id=HG002_chrY_G0000587;Parent=HG002_chrY_T0001776;transcript_name=HG002_chrY_T0001776;gene_name=ENSG00000229725;ID=exon:HG002_chrY_T0001776:0;Name=ENSG00000229725;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22706974	22708217	.	+	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1;transcript_id=HG002_chrY_T0001776;gene_id=HG002_chrY_G0000587;Parent=HG002_chrY_T0001776;transcript_name=HG002_chrY_T0001776;gene_name=ENSG00000229725;ID=intron:HG002_chrY_T0001776:0;Name=ENSG00000229725;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22708218	22708385	.	+	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1;transcript_id=HG002_chrY_T0001776;gene_id=HG002_chrY_G0000587;Parent=HG002_chrY_T0001776;transcript_name=HG002_chrY_T0001776;gene_name=ENSG00000229725;ID=exon:HG002_chrY_T0001776:1;Name=ENSG00000229725;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22708386	22708756	.	+	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1;transcript_id=HG002_chrY_T0001776;gene_id=HG002_chrY_G0000587;Parent=HG002_chrY_T0001776;transcript_name=HG002_chrY_T0001776;gene_name=ENSG00000229725;ID=intron:HG002_chrY_T0001776:1;Name=ENSG00000229725;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22708757	22708806	.	+	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1;transcript_id=HG002_chrY_T0001776;gene_id=HG002_chrY_G0000587;Parent=HG002_chrY_T0001776;transcript_name=HG002_chrY_T0001776;gene_name=ENSG00000229725;ID=exon:HG002_chrY_T0001776:2;Name=ENSG00000229725;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22715333	22729781	.	-	.	source_gene_common_name=RBMY1A1;source_gene=ENSG00000234414.8;alternative_source_transcripts=ENST00000382680.5;gene_id=HG002_chrY_G0000588;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff;ID=HG002_chrY_G0000588;Name=RBMY1A1
HG002_chrY	CAT	transcript	22715333	22729781	100	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_G0000588;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=HG002_chrY_T0001777;Name=RBMY1A1
HG002_chrY	CAT	exon	22715333	22715909	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=exon:HG002_chrY_T0001777:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22715611	22715909	.	-	2	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=CDS:HG002_chrY_T0001777:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	22715611	22715613	.	-	0	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=stop_codon:HG002_chrY_T0001777;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22715910	22716320	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=intron:HG002_chrY_T0001777:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22716321	22716409	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=exon:HG002_chrY_T0001777:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22716321	22716409	.	-	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=CDS:HG002_chrY_T0001777:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22716410	22716496	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=intron:HG002_chrY_T0001777:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22716497	22716607	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=exon:HG002_chrY_T0001777:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22716497	22716607	.	-	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=CDS:HG002_chrY_T0001777:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22716608	22717528	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=intron:HG002_chrY_T0001777:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22717529	22717639	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=exon:HG002_chrY_T0001777:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22717529	22717639	.	-	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=CDS:HG002_chrY_T0001777:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22717640	22718073	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=intron:HG002_chrY_T0001777:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22718074	22718184	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=exon:HG002_chrY_T0001777:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22718074	22718184	.	-	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=CDS:HG002_chrY_T0001777:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22718185	22718625	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=intron:HG002_chrY_T0001777:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22718626	22718736	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=exon:HG002_chrY_T0001777:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22718626	22718736	.	-	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=CDS:HG002_chrY_T0001777:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22718737	22719691	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=intron:HG002_chrY_T0001777:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22719692	22719806	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=exon:HG002_chrY_T0001777:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22719692	22719806	.	-	2	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=CDS:HG002_chrY_T0001777:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22719807	22721816	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=intron:HG002_chrY_T0001777:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22721817	22721969	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=exon:HG002_chrY_T0001777:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22721817	22721969	.	-	2	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=CDS:HG002_chrY_T0001777:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22721970	22723884	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=intron:HG002_chrY_T0001777:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22723885	22724062	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=exon:HG002_chrY_T0001777:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22723885	22724062	.	-	0	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=CDS:HG002_chrY_T0001777:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22724063	22727081	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=intron:HG002_chrY_T0001777:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22727082	22727185	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=exon:HG002_chrY_T0001777:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22727082	22727185	.	-	2	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=CDS:HG002_chrY_T0001777:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22727186	22727659	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=intron:HG002_chrY_T0001777:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22727660	22727772	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=exon:HG002_chrY_T0001777:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22727660	22727768	.	-	0	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=CDS:HG002_chrY_T0001777:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	22727766	22727768	.	-	0	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=start_codon:HG002_chrY_T0001777;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22727773	22729633	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=intron:HG002_chrY_T0001777:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22729634	22729781	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG002_chrY_T0001777;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001777;transcript_name=HG002_chrY_T0001777;gene_name=RBMY1A1;ID=exon:HG002_chrY_T0001777:11;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	22715333	22729756	1000	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG002_chrY_T0001778;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_G0000588;transcript_name=HG002_chrY_T0001778;gene_name=RBMY1A1;ID=HG002_chrY_T0001778;Name=RBMY1A1
HG002_chrY	CAT	exon	22715333	22715909	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG002_chrY_T0001778;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001778;transcript_name=HG002_chrY_T0001778;gene_name=RBMY1A1;ID=exon:HG002_chrY_T0001778:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22715910	22716320	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG002_chrY_T0001778;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001778;transcript_name=HG002_chrY_T0001778;gene_name=RBMY1A1;ID=intron:HG002_chrY_T0001778:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22716321	22716409	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG002_chrY_T0001778;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001778;transcript_name=HG002_chrY_T0001778;gene_name=RBMY1A1;ID=exon:HG002_chrY_T0001778:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22716410	22716496	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG002_chrY_T0001778;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001778;transcript_name=HG002_chrY_T0001778;gene_name=RBMY1A1;ID=intron:HG002_chrY_T0001778:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22716497	22716607	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG002_chrY_T0001778;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001778;transcript_name=HG002_chrY_T0001778;gene_name=RBMY1A1;ID=exon:HG002_chrY_T0001778:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22716608	22717528	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG002_chrY_T0001778;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001778;transcript_name=HG002_chrY_T0001778;gene_name=RBMY1A1;ID=intron:HG002_chrY_T0001778:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22717529	22717639	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG002_chrY_T0001778;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001778;transcript_name=HG002_chrY_T0001778;gene_name=RBMY1A1;ID=exon:HG002_chrY_T0001778:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22717640	22718073	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG002_chrY_T0001778;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001778;transcript_name=HG002_chrY_T0001778;gene_name=RBMY1A1;ID=intron:HG002_chrY_T0001778:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22718074	22718184	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG002_chrY_T0001778;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001778;transcript_name=HG002_chrY_T0001778;gene_name=RBMY1A1;ID=exon:HG002_chrY_T0001778:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22718185	22718625	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG002_chrY_T0001778;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001778;transcript_name=HG002_chrY_T0001778;gene_name=RBMY1A1;ID=intron:HG002_chrY_T0001778:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22718626	22718736	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG002_chrY_T0001778;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001778;transcript_name=HG002_chrY_T0001778;gene_name=RBMY1A1;ID=exon:HG002_chrY_T0001778:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22718737	22719691	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG002_chrY_T0001778;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001778;transcript_name=HG002_chrY_T0001778;gene_name=RBMY1A1;ID=intron:HG002_chrY_T0001778:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22719692	22719806	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG002_chrY_T0001778;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001778;transcript_name=HG002_chrY_T0001778;gene_name=RBMY1A1;ID=exon:HG002_chrY_T0001778:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22719807	22721816	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG002_chrY_T0001778;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001778;transcript_name=HG002_chrY_T0001778;gene_name=RBMY1A1;ID=intron:HG002_chrY_T0001778:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22721817	22721969	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG002_chrY_T0001778;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001778;transcript_name=HG002_chrY_T0001778;gene_name=RBMY1A1;ID=exon:HG002_chrY_T0001778:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22721937	22721969	.	-	0	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG002_chrY_T0001778;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001778;transcript_name=HG002_chrY_T0001778;gene_name=RBMY1A1;ID=CDS:HG002_chrY_T0001778:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	22721937	22721939	.	-	0	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG002_chrY_T0001778;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001778;transcript_name=HG002_chrY_T0001778;gene_name=RBMY1A1;ID=stop_codon:HG002_chrY_T0001778;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22721970	22727081	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG002_chrY_T0001778;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001778;transcript_name=HG002_chrY_T0001778;gene_name=RBMY1A1;ID=intron:HG002_chrY_T0001778:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22727082	22727185	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG002_chrY_T0001778;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001778;transcript_name=HG002_chrY_T0001778;gene_name=RBMY1A1;ID=exon:HG002_chrY_T0001778:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22727082	22727185	.	-	2	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG002_chrY_T0001778;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001778;transcript_name=HG002_chrY_T0001778;gene_name=RBMY1A1;ID=CDS:HG002_chrY_T0001778:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22727186	22727659	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG002_chrY_T0001778;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001778;transcript_name=HG002_chrY_T0001778;gene_name=RBMY1A1;ID=intron:HG002_chrY_T0001778:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22727660	22727772	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG002_chrY_T0001778;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001778;transcript_name=HG002_chrY_T0001778;gene_name=RBMY1A1;ID=exon:HG002_chrY_T0001778:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22727660	22727768	.	-	0	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG002_chrY_T0001778;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001778;transcript_name=HG002_chrY_T0001778;gene_name=RBMY1A1;ID=CDS:HG002_chrY_T0001778:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	22727766	22727768	.	-	0	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG002_chrY_T0001778;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001778;transcript_name=HG002_chrY_T0001778;gene_name=RBMY1A1;ID=start_codon:HG002_chrY_T0001778;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22727773	22729633	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG002_chrY_T0001778;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001778;transcript_name=HG002_chrY_T0001778;gene_name=RBMY1A1;ID=intron:HG002_chrY_T0001778:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22729634	22729756	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG002_chrY_T0001778;gene_id=HG002_chrY_G0000588;Parent=HG002_chrY_T0001778;transcript_name=HG002_chrY_T0001778;gene_name=RBMY1A1;ID=exon:HG002_chrY_T0001778:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22730649	22732814	.	+	.	source_gene_common_name=ENSG00000251618;source_gene=ENSG00000251618.1;alternative_source_transcripts=ENST00000509611.1;gene_id=HG002_chrY_G0000589;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000251618;gene_sources=liftoff;ID=HG002_chrY_G0000589;Name=ENSG00000251618
HG002_chrY	CAT	transcript	22730649	22732814	1000	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;alternative_source_transcripts=ENST00000509611.1;transcript_id=HG002_chrY_T0001779;gene_id=HG002_chrY_G0000589;Parent=HG002_chrY_G0000589;transcript_name=HG002_chrY_T0001779;gene_name=ENSG00000251618;ID=HG002_chrY_T0001779;Name=ENSG00000251618
HG002_chrY	CAT	exon	22730649	22731033	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;alternative_source_transcripts=ENST00000509611.1;transcript_id=HG002_chrY_T0001779;gene_id=HG002_chrY_G0000589;Parent=HG002_chrY_T0001779;transcript_name=HG002_chrY_T0001779;gene_name=ENSG00000251618;ID=exon:HG002_chrY_T0001779:0;Name=ENSG00000251618;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22731034	22732030	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;alternative_source_transcripts=ENST00000509611.1;transcript_id=HG002_chrY_T0001779;gene_id=HG002_chrY_G0000589;Parent=HG002_chrY_T0001779;transcript_name=HG002_chrY_T0001779;gene_name=ENSG00000251618;ID=intron:HG002_chrY_T0001779:0;Name=ENSG00000251618;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22732031	22732115	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;alternative_source_transcripts=ENST00000509611.1;transcript_id=HG002_chrY_T0001779;gene_id=HG002_chrY_G0000589;Parent=HG002_chrY_T0001779;transcript_name=HG002_chrY_T0001779;gene_name=ENSG00000251618;ID=exon:HG002_chrY_T0001779:1;Name=ENSG00000251618;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22732116	22732359	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;alternative_source_transcripts=ENST00000509611.1;transcript_id=HG002_chrY_T0001779;gene_id=HG002_chrY_G0000589;Parent=HG002_chrY_T0001779;transcript_name=HG002_chrY_T0001779;gene_name=ENSG00000251618;ID=intron:HG002_chrY_T0001779:1;Name=ENSG00000251618;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22732360	22732438	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;alternative_source_transcripts=ENST00000509611.1;transcript_id=HG002_chrY_T0001779;gene_id=HG002_chrY_G0000589;Parent=HG002_chrY_T0001779;transcript_name=HG002_chrY_T0001779;gene_name=ENSG00000251618;ID=exon:HG002_chrY_T0001779:2;Name=ENSG00000251618;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22732439	22732523	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;alternative_source_transcripts=ENST00000509611.1;transcript_id=HG002_chrY_T0001779;gene_id=HG002_chrY_G0000589;Parent=HG002_chrY_T0001779;transcript_name=HG002_chrY_T0001779;gene_name=ENSG00000251618;ID=intron:HG002_chrY_T0001779:2;Name=ENSG00000251618;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22732524	22732655	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;alternative_source_transcripts=ENST00000509611.1;transcript_id=HG002_chrY_T0001779;gene_id=HG002_chrY_G0000589;Parent=HG002_chrY_T0001779;transcript_name=HG002_chrY_T0001779;gene_name=ENSG00000251618;ID=exon:HG002_chrY_T0001779:3;Name=ENSG00000251618;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22732656	22732772	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;alternative_source_transcripts=ENST00000509611.1;transcript_id=HG002_chrY_T0001779;gene_id=HG002_chrY_G0000589;Parent=HG002_chrY_T0001779;transcript_name=HG002_chrY_T0001779;gene_name=ENSG00000251618;ID=intron:HG002_chrY_T0001779:3;Name=ENSG00000251618;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22732773	22732814	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;alternative_source_transcripts=ENST00000509611.1;transcript_id=HG002_chrY_T0001779;gene_id=HG002_chrY_G0000589;Parent=HG002_chrY_T0001779;transcript_name=HG002_chrY_T0001779;gene_name=ENSG00000251618;ID=exon:HG002_chrY_T0001779:4;Name=ENSG00000251618;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22738873	22753285	.	-	.	source_gene_common_name=RBMY1E;source_gene=ENSG00000242389.9;alternative_source_transcripts=ENST00000358944.8;gene_id=HG002_chrY_G0000590;gene_biotype=protein_coding;gene_name=RBMY1E;gene_sources=liftoff;ID=HG002_chrY_G0000590;Name=RBMY1E
HG002_chrY	CAT	transcript	22738873	22753285	1000	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG002_chrY_T0001780;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_G0000590;transcript_name=HG002_chrY_T0001780;gene_name=RBMY1E;ID=HG002_chrY_T0001780;Name=RBMY1E
HG002_chrY	CAT	exon	22738873	22739449	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG002_chrY_T0001780;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001780;transcript_name=HG002_chrY_T0001780;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001780:0;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22739450	22739860	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG002_chrY_T0001780;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001780;transcript_name=HG002_chrY_T0001780;gene_name=RBMY1E;ID=intron:HG002_chrY_T0001780:0;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22739861	22739949	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG002_chrY_T0001780;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001780;transcript_name=HG002_chrY_T0001780;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001780:1;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22739950	22740035	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG002_chrY_T0001780;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001780;transcript_name=HG002_chrY_T0001780;gene_name=RBMY1E;ID=intron:HG002_chrY_T0001780:1;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22740036	22740146	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG002_chrY_T0001780;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001780;transcript_name=HG002_chrY_T0001780;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001780:2;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22740147	22741067	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG002_chrY_T0001780;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001780;transcript_name=HG002_chrY_T0001780;gene_name=RBMY1E;ID=intron:HG002_chrY_T0001780:2;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22741068	22741178	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG002_chrY_T0001780;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001780;transcript_name=HG002_chrY_T0001780;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001780:3;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22741179	22741612	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG002_chrY_T0001780;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001780;transcript_name=HG002_chrY_T0001780;gene_name=RBMY1E;ID=intron:HG002_chrY_T0001780:3;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22741613	22741723	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG002_chrY_T0001780;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001780;transcript_name=HG002_chrY_T0001780;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001780:4;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22741724	22742164	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG002_chrY_T0001780;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001780;transcript_name=HG002_chrY_T0001780;gene_name=RBMY1E;ID=intron:HG002_chrY_T0001780:4;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22742165	22742275	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG002_chrY_T0001780;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001780;transcript_name=HG002_chrY_T0001780;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001780:5;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22742276	22743230	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG002_chrY_T0001780;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001780;transcript_name=HG002_chrY_T0001780;gene_name=RBMY1E;ID=intron:HG002_chrY_T0001780:5;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22743231	22743345	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG002_chrY_T0001780;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001780;transcript_name=HG002_chrY_T0001780;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001780:6;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22743346	22745355	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG002_chrY_T0001780;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001780;transcript_name=HG002_chrY_T0001780;gene_name=RBMY1E;ID=intron:HG002_chrY_T0001780:6;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22745356	22745508	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG002_chrY_T0001780;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001780;transcript_name=HG002_chrY_T0001780;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001780:7;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22745476	22745508	.	-	0	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG002_chrY_T0001780;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001780;transcript_name=HG002_chrY_T0001780;gene_name=RBMY1E;ID=CDS:HG002_chrY_T0001780:0;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	22745476	22745478	.	-	0	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG002_chrY_T0001780;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001780;transcript_name=HG002_chrY_T0001780;gene_name=RBMY1E;ID=stop_codon:HG002_chrY_T0001780;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22745509	22750620	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG002_chrY_T0001780;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001780;transcript_name=HG002_chrY_T0001780;gene_name=RBMY1E;ID=intron:HG002_chrY_T0001780:7;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22750621	22750724	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG002_chrY_T0001780;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001780;transcript_name=HG002_chrY_T0001780;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001780:8;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22750621	22750724	.	-	2	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG002_chrY_T0001780;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001780;transcript_name=HG002_chrY_T0001780;gene_name=RBMY1E;ID=CDS:HG002_chrY_T0001780:1;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22750725	22751188	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG002_chrY_T0001780;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001780;transcript_name=HG002_chrY_T0001780;gene_name=RBMY1E;ID=intron:HG002_chrY_T0001780:8;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22751189	22751301	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG002_chrY_T0001780;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001780;transcript_name=HG002_chrY_T0001780;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001780:9;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22751189	22751297	.	-	0	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG002_chrY_T0001780;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001780;transcript_name=HG002_chrY_T0001780;gene_name=RBMY1E;ID=CDS:HG002_chrY_T0001780:2;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	22751295	22751297	.	-	0	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG002_chrY_T0001780;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001780;transcript_name=HG002_chrY_T0001780;gene_name=RBMY1E;ID=start_codon:HG002_chrY_T0001780;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22751302	22753162	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG002_chrY_T0001780;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001780;transcript_name=HG002_chrY_T0001780;gene_name=RBMY1E;ID=intron:HG002_chrY_T0001780:9;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22753163	22753285	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG002_chrY_T0001780;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001780;transcript_name=HG002_chrY_T0001780;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001780:10;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	22738875	22753275	100	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_G0000590;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=HG002_chrY_T0001781;Name=RBMY1E
HG002_chrY	CAT	exon	22738875	22739449	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001781:0;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22739151	22739449	.	-	2	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=CDS:HG002_chrY_T0001781:0;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	22739151	22739153	.	-	0	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=stop_codon:HG002_chrY_T0001781;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22739450	22739860	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=intron:HG002_chrY_T0001781:0;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22739861	22739949	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001781:1;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22739861	22739949	.	-	1	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=CDS:HG002_chrY_T0001781:1;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22739950	22741067	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=intron:HG002_chrY_T0001781:1;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22741068	22741178	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001781:2;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22741068	22741178	.	-	1	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=CDS:HG002_chrY_T0001781:2;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22741179	22741612	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=intron:HG002_chrY_T0001781:2;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22741613	22741723	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001781:3;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22741613	22741723	.	-	1	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=CDS:HG002_chrY_T0001781:3;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22741724	22742164	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=intron:HG002_chrY_T0001781:3;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22742165	22742275	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001781:4;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22742165	22742275	.	-	1	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=CDS:HG002_chrY_T0001781:4;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22742276	22743230	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=intron:HG002_chrY_T0001781:4;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22743231	22743345	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001781:5;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22743231	22743345	.	-	2	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=CDS:HG002_chrY_T0001781:5;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22743346	22745355	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=intron:HG002_chrY_T0001781:5;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22745356	22745508	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001781:6;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22745356	22745508	.	-	2	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=CDS:HG002_chrY_T0001781:6;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22745509	22747423	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=intron:HG002_chrY_T0001781:6;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22747424	22747601	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001781:7;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22747424	22747601	.	-	0	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=CDS:HG002_chrY_T0001781:7;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22747602	22750620	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=intron:HG002_chrY_T0001781:7;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22750621	22750724	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001781:8;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22750621	22750724	.	-	2	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=CDS:HG002_chrY_T0001781:8;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22750725	22751188	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=intron:HG002_chrY_T0001781:8;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22751189	22751301	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001781:9;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22751189	22751297	.	-	0	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=CDS:HG002_chrY_T0001781:9;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	22751295	22751297	.	-	0	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=start_codon:HG002_chrY_T0001781;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22751302	22753162	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=intron:HG002_chrY_T0001781:9;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22753163	22753275	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=HG002_chrY_T0001781;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001781;transcript_name=HG002_chrY_T0001781;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001781:10;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	22738877	22753275	100	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_G0000590;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=HG002_chrY_T0001782;Name=RBMY1E
HG002_chrY	CAT	exon	22738877	22739449	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001782:0;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22739151	22739449	.	-	2	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=CDS:HG002_chrY_T0001782:0;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	22739151	22739153	.	-	0	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=stop_codon:HG002_chrY_T0001782;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22739450	22739860	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=intron:HG002_chrY_T0001782:0;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22739861	22739949	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001782:1;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22739861	22739949	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=CDS:HG002_chrY_T0001782:1;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22739950	22740035	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=intron:HG002_chrY_T0001782:1;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22740036	22740146	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001782:2;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22740036	22740146	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=CDS:HG002_chrY_T0001782:2;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22740147	22741067	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=intron:HG002_chrY_T0001782:2;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22741068	22741178	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001782:3;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22741068	22741178	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=CDS:HG002_chrY_T0001782:3;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22741179	22741612	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=intron:HG002_chrY_T0001782:3;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22741613	22741723	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001782:4;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22741613	22741723	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=CDS:HG002_chrY_T0001782:4;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22741724	22742164	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=intron:HG002_chrY_T0001782:4;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22742165	22742275	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001782:5;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22742165	22742275	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=CDS:HG002_chrY_T0001782:5;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22742276	22743230	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=intron:HG002_chrY_T0001782:5;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22743231	22743345	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001782:6;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22743231	22743345	.	-	2	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=CDS:HG002_chrY_T0001782:6;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22743346	22745355	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=intron:HG002_chrY_T0001782:6;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22745356	22745508	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001782:7;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22745356	22745508	.	-	2	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=CDS:HG002_chrY_T0001782:7;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22745509	22747423	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=intron:HG002_chrY_T0001782:7;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22747424	22747601	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001782:8;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22747424	22747601	.	-	0	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=CDS:HG002_chrY_T0001782:8;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22747602	22750620	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=intron:HG002_chrY_T0001782:8;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22750621	22750724	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001782:9;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22750621	22750724	.	-	2	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=CDS:HG002_chrY_T0001782:9;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22750725	22751188	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=intron:HG002_chrY_T0001782:9;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22751189	22751301	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001782:10;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	22751189	22751297	.	-	0	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=CDS:HG002_chrY_T0001782:10;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	22751295	22751297	.	-	0	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=start_codon:HG002_chrY_T0001782;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22751302	22753162	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=intron:HG002_chrY_T0001782:10;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22753163	22753275	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=HG002_chrY_T0001782;gene_id=HG002_chrY_G0000590;Parent=HG002_chrY_T0001782;transcript_name=HG002_chrY_T0001782;gene_name=RBMY1E;ID=exon:HG002_chrY_T0001782:11;Name=RBMY1E;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22754178	22756349	.	+	.	source_gene_common_name=ENSG00000227444;source_gene=ENSG00000227444.1;gene_id=HG002_chrY_G0000591;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000227444;gene_sources=liftoff,transMap;ID=HG002_chrY_G0000591;Name=ENSG00000227444
HG002_chrY	CAT	transcript	22754178	22756349	1000	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG002_chrY_T0001783;gene_id=HG002_chrY_G0000591;Parent=HG002_chrY_G0000591;transcript_name=HG002_chrY_T0001783;gene_name=ENSG00000227444;ID=HG002_chrY_T0001783;Name=ENSG00000227444
HG002_chrY	CAT	exon	22754178	22754571	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG002_chrY_T0001783;gene_id=HG002_chrY_G0000591;Parent=HG002_chrY_T0001783;transcript_name=HG002_chrY_T0001783;gene_name=ENSG00000227444;ID=exon:HG002_chrY_T0001783:0;Name=ENSG00000227444;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22754572	22755559	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG002_chrY_T0001783;gene_id=HG002_chrY_G0000591;Parent=HG002_chrY_T0001783;transcript_name=HG002_chrY_T0001783;gene_name=ENSG00000227444;ID=intron:HG002_chrY_T0001783:0;Name=ENSG00000227444;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22755560	22755644	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG002_chrY_T0001783;gene_id=HG002_chrY_G0000591;Parent=HG002_chrY_T0001783;transcript_name=HG002_chrY_T0001783;gene_name=ENSG00000227444;ID=exon:HG002_chrY_T0001783:1;Name=ENSG00000227444;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22755645	22755888	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG002_chrY_T0001783;gene_id=HG002_chrY_G0000591;Parent=HG002_chrY_T0001783;transcript_name=HG002_chrY_T0001783;gene_name=ENSG00000227444;ID=intron:HG002_chrY_T0001783:1;Name=ENSG00000227444;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22755889	22756184	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG002_chrY_T0001783;gene_id=HG002_chrY_G0000591;Parent=HG002_chrY_T0001783;transcript_name=HG002_chrY_T0001783;gene_name=ENSG00000227444;ID=exon:HG002_chrY_T0001783:2;Name=ENSG00000227444;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22756185	22756301	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG002_chrY_T0001783;gene_id=HG002_chrY_G0000591;Parent=HG002_chrY_T0001783;transcript_name=HG002_chrY_T0001783;gene_name=ENSG00000227444;ID=intron:HG002_chrY_T0001783:2;Name=ENSG00000227444;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22756302	22756349	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG002_chrY_T0001783;gene_id=HG002_chrY_G0000591;Parent=HG002_chrY_T0001783;transcript_name=HG002_chrY_T0001783;gene_name=ENSG00000227444;ID=exon:HG002_chrY_T0001783:3;Name=ENSG00000227444;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	22754178	22756349	1000	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG002_chrY_T0001784;gene_id=HG002_chrY_G0000591;Parent=HG002_chrY_G0000591;transcript_name=HG002_chrY_T0001784;gene_name=ENSG00000227444;ID=HG002_chrY_T0001784;Name=ENSG00000227444
HG002_chrY	CAT	exon	22754178	22754571	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG002_chrY_T0001784;gene_id=HG002_chrY_G0000591;Parent=HG002_chrY_T0001784;transcript_name=HG002_chrY_T0001784;gene_name=ENSG00000227444;ID=exon:HG002_chrY_T0001784:0;Name=ENSG00000227444;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22754572	22755559	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG002_chrY_T0001784;gene_id=HG002_chrY_G0000591;Parent=HG002_chrY_T0001784;transcript_name=HG002_chrY_T0001784;gene_name=ENSG00000227444;ID=intron:HG002_chrY_T0001784:0;Name=ENSG00000227444;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22755560	22755644	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG002_chrY_T0001784;gene_id=HG002_chrY_G0000591;Parent=HG002_chrY_T0001784;transcript_name=HG002_chrY_T0001784;gene_name=ENSG00000227444;ID=exon:HG002_chrY_T0001784:1;Name=ENSG00000227444;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22755645	22755888	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG002_chrY_T0001784;gene_id=HG002_chrY_G0000591;Parent=HG002_chrY_T0001784;transcript_name=HG002_chrY_T0001784;gene_name=ENSG00000227444;ID=intron:HG002_chrY_T0001784:1;Name=ENSG00000227444;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22755889	22755967	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG002_chrY_T0001784;gene_id=HG002_chrY_G0000591;Parent=HG002_chrY_T0001784;transcript_name=HG002_chrY_T0001784;gene_name=ENSG00000227444;ID=exon:HG002_chrY_T0001784:2;Name=ENSG00000227444;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22755968	22756040	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG002_chrY_T0001784;gene_id=HG002_chrY_G0000591;Parent=HG002_chrY_T0001784;transcript_name=HG002_chrY_T0001784;gene_name=ENSG00000227444;ID=intron:HG002_chrY_T0001784:2;Name=ENSG00000227444;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22756041	22756184	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG002_chrY_T0001784;gene_id=HG002_chrY_G0000591;Parent=HG002_chrY_T0001784;transcript_name=HG002_chrY_T0001784;gene_name=ENSG00000227444;ID=exon:HG002_chrY_T0001784:3;Name=ENSG00000227444;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22756185	22756301	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG002_chrY_T0001784;gene_id=HG002_chrY_G0000591;Parent=HG002_chrY_T0001784;transcript_name=HG002_chrY_T0001784;gene_name=ENSG00000227444;ID=intron:HG002_chrY_T0001784:3;Name=ENSG00000227444;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22756302	22756349	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG002_chrY_T0001784;gene_id=HG002_chrY_G0000591;Parent=HG002_chrY_T0001784;transcript_name=HG002_chrY_T0001784;gene_name=ENSG00000227444;ID=exon:HG002_chrY_T0001784:4;Name=ENSG00000227444;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22762764	22772398	.	-	.	source_gene_common_name=RBMY2AP;source_gene=ENSG00000226092.4;gene_id=HG002_chrY_G0000592;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2AP;gene_sources=liftoff;ID=HG002_chrY_G0000592;Name=RBMY2AP
HG002_chrY	CAT	transcript	22762764	22772398	1000	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG002_chrY_T0001785;gene_id=HG002_chrY_G0000592;Parent=HG002_chrY_G0000592;transcript_name=HG002_chrY_T0001785;gene_name=RBMY2AP;ID=HG002_chrY_T0001785;Name=RBMY2AP
HG002_chrY	CAT	exon	22762764	22763062	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG002_chrY_T0001785;gene_id=HG002_chrY_G0000592;Parent=HG002_chrY_T0001785;transcript_name=HG002_chrY_T0001785;gene_name=RBMY2AP;ID=exon:HG002_chrY_T0001785:0;Name=RBMY2AP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22763063	22763486	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG002_chrY_T0001785;gene_id=HG002_chrY_G0000592;Parent=HG002_chrY_T0001785;transcript_name=HG002_chrY_T0001785;gene_name=RBMY2AP;ID=intron:HG002_chrY_T0001785:0;Name=RBMY2AP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22763487	22763574	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG002_chrY_T0001785;gene_id=HG002_chrY_G0000592;Parent=HG002_chrY_T0001785;transcript_name=HG002_chrY_T0001785;gene_name=RBMY2AP;ID=exon:HG002_chrY_T0001785:1;Name=RBMY2AP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22763575	22763656	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG002_chrY_T0001785;gene_id=HG002_chrY_G0000592;Parent=HG002_chrY_T0001785;transcript_name=HG002_chrY_T0001785;gene_name=RBMY2AP;ID=intron:HG002_chrY_T0001785:1;Name=RBMY2AP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22763657	22763767	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG002_chrY_T0001785;gene_id=HG002_chrY_G0000592;Parent=HG002_chrY_T0001785;transcript_name=HG002_chrY_T0001785;gene_name=RBMY2AP;ID=exon:HG002_chrY_T0001785:2;Name=RBMY2AP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22763768	22764636	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG002_chrY_T0001785;gene_id=HG002_chrY_G0000592;Parent=HG002_chrY_T0001785;transcript_name=HG002_chrY_T0001785;gene_name=RBMY2AP;ID=intron:HG002_chrY_T0001785:2;Name=RBMY2AP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22764637	22764751	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG002_chrY_T0001785;gene_id=HG002_chrY_G0000592;Parent=HG002_chrY_T0001785;transcript_name=HG002_chrY_T0001785;gene_name=RBMY2AP;ID=exon:HG002_chrY_T0001785:3;Name=RBMY2AP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22764752	22766758	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG002_chrY_T0001785;gene_id=HG002_chrY_G0000592;Parent=HG002_chrY_T0001785;transcript_name=HG002_chrY_T0001785;gene_name=RBMY2AP;ID=intron:HG002_chrY_T0001785:3;Name=RBMY2AP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22766759	22766911	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG002_chrY_T0001785;gene_id=HG002_chrY_G0000592;Parent=HG002_chrY_T0001785;transcript_name=HG002_chrY_T0001785;gene_name=RBMY2AP;ID=exon:HG002_chrY_T0001785:4;Name=RBMY2AP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22766912	22768846	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG002_chrY_T0001785;gene_id=HG002_chrY_G0000592;Parent=HG002_chrY_T0001785;transcript_name=HG002_chrY_T0001785;gene_name=RBMY2AP;ID=intron:HG002_chrY_T0001785:4;Name=RBMY2AP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22768847	22769024	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG002_chrY_T0001785;gene_id=HG002_chrY_G0000592;Parent=HG002_chrY_T0001785;transcript_name=HG002_chrY_T0001785;gene_name=RBMY2AP;ID=exon:HG002_chrY_T0001785:5;Name=RBMY2AP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22769025	22771732	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG002_chrY_T0001785;gene_id=HG002_chrY_G0000592;Parent=HG002_chrY_T0001785;transcript_name=HG002_chrY_T0001785;gene_name=RBMY2AP;ID=intron:HG002_chrY_T0001785:5;Name=RBMY2AP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22771733	22771836	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG002_chrY_T0001785;gene_id=HG002_chrY_G0000592;Parent=HG002_chrY_T0001785;transcript_name=HG002_chrY_T0001785;gene_name=RBMY2AP;ID=exon:HG002_chrY_T0001785:6;Name=RBMY2AP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22771837	22772289	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG002_chrY_T0001785;gene_id=HG002_chrY_G0000592;Parent=HG002_chrY_T0001785;transcript_name=HG002_chrY_T0001785;gene_name=RBMY2AP;ID=intron:HG002_chrY_T0001785:6;Name=RBMY2AP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22772290	22772398	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG002_chrY_T0001785;gene_id=HG002_chrY_G0000592;Parent=HG002_chrY_T0001785;transcript_name=HG002_chrY_T0001785;gene_name=RBMY2AP;ID=exon:HG002_chrY_T0001785:7;Name=RBMY2AP;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22764554	22774400	.	-	.	source_gene_common_name=ENSG00000295847;source_gene=ENSG00000295847.1;gene_id=HG002_chrY_G0000593;gene_biotype=lncRNA;gene_name=ENSG00000295847;gene_sources=liftoff;ID=HG002_chrY_G0000593;Name=ENSG00000295847
HG002_chrY	CAT	transcript	22764554	22774400	1000	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG002_chrY_T0001786;gene_id=HG002_chrY_G0000593;Parent=HG002_chrY_G0000593;transcript_name=HG002_chrY_T0001786;gene_name=ENSG00000295847;ID=HG002_chrY_T0001786;Name=ENSG00000295847
HG002_chrY	CAT	exon	22764554	22764751	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG002_chrY_T0001786;gene_id=HG002_chrY_G0000593;Parent=HG002_chrY_T0001786;transcript_name=HG002_chrY_T0001786;gene_name=ENSG00000295847;ID=exon:HG002_chrY_T0001786:0;Name=ENSG00000295847;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22764752	22766758	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG002_chrY_T0001786;gene_id=HG002_chrY_G0000593;Parent=HG002_chrY_T0001786;transcript_name=HG002_chrY_T0001786;gene_name=ENSG00000295847;ID=intron:HG002_chrY_T0001786:0;Name=ENSG00000295847;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22766759	22766911	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG002_chrY_T0001786;gene_id=HG002_chrY_G0000593;Parent=HG002_chrY_T0001786;transcript_name=HG002_chrY_T0001786;gene_name=ENSG00000295847;ID=exon:HG002_chrY_T0001786:1;Name=ENSG00000295847;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22766912	22768846	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG002_chrY_T0001786;gene_id=HG002_chrY_G0000593;Parent=HG002_chrY_T0001786;transcript_name=HG002_chrY_T0001786;gene_name=ENSG00000295847;ID=intron:HG002_chrY_T0001786:1;Name=ENSG00000295847;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22768847	22769024	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG002_chrY_T0001786;gene_id=HG002_chrY_G0000593;Parent=HG002_chrY_T0001786;transcript_name=HG002_chrY_T0001786;gene_name=ENSG00000295847;ID=exon:HG002_chrY_T0001786:2;Name=ENSG00000295847;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22769025	22771732	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG002_chrY_T0001786;gene_id=HG002_chrY_G0000593;Parent=HG002_chrY_T0001786;transcript_name=HG002_chrY_T0001786;gene_name=ENSG00000295847;ID=intron:HG002_chrY_T0001786:2;Name=ENSG00000295847;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22771733	22771836	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG002_chrY_T0001786;gene_id=HG002_chrY_G0000593;Parent=HG002_chrY_T0001786;transcript_name=HG002_chrY_T0001786;gene_name=ENSG00000295847;ID=exon:HG002_chrY_T0001786:3;Name=ENSG00000295847;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22771837	22772289	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG002_chrY_T0001786;gene_id=HG002_chrY_G0000593;Parent=HG002_chrY_T0001786;transcript_name=HG002_chrY_T0001786;gene_name=ENSG00000295847;ID=intron:HG002_chrY_T0001786:3;Name=ENSG00000295847;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22772290	22772402	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG002_chrY_T0001786;gene_id=HG002_chrY_G0000593;Parent=HG002_chrY_T0001786;transcript_name=HG002_chrY_T0001786;gene_name=ENSG00000295847;ID=exon:HG002_chrY_T0001786:4;Name=ENSG00000295847;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22772403	22773416	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG002_chrY_T0001786;gene_id=HG002_chrY_G0000593;Parent=HG002_chrY_T0001786;transcript_name=HG002_chrY_T0001786;gene_name=ENSG00000295847;ID=intron:HG002_chrY_T0001786:4;Name=ENSG00000295847;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22773417	22773496	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG002_chrY_T0001786;gene_id=HG002_chrY_G0000593;Parent=HG002_chrY_T0001786;transcript_name=HG002_chrY_T0001786;gene_name=ENSG00000295847;ID=exon:HG002_chrY_T0001786:5;Name=ENSG00000295847;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22773497	22774250	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG002_chrY_T0001786;gene_id=HG002_chrY_G0000593;Parent=HG002_chrY_T0001786;transcript_name=HG002_chrY_T0001786;gene_name=ENSG00000295847;ID=intron:HG002_chrY_T0001786:5;Name=ENSG00000295847;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22774251	22774400	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG002_chrY_T0001786;gene_id=HG002_chrY_G0000593;Parent=HG002_chrY_T0001786;transcript_name=HG002_chrY_T0001786;gene_name=ENSG00000295847;ID=exon:HG002_chrY_T0001786:6;Name=ENSG00000295847;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	22765923	22774369	1000	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG002_chrY_T0001787;gene_id=HG002_chrY_G0000593;Parent=HG002_chrY_G0000593;transcript_name=HG002_chrY_T0001787;gene_name=ENSG00000295847;ID=HG002_chrY_T0001787;Name=ENSG00000295847
HG002_chrY	CAT	exon	22765923	22766180	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG002_chrY_T0001787;gene_id=HG002_chrY_G0000593;Parent=HG002_chrY_T0001787;transcript_name=HG002_chrY_T0001787;gene_name=ENSG00000295847;ID=exon:HG002_chrY_T0001787:0;Name=ENSG00000295847;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22766181	22766758	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG002_chrY_T0001787;gene_id=HG002_chrY_G0000593;Parent=HG002_chrY_T0001787;transcript_name=HG002_chrY_T0001787;gene_name=ENSG00000295847;ID=intron:HG002_chrY_T0001787:0;Name=ENSG00000295847;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22766759	22766911	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG002_chrY_T0001787;gene_id=HG002_chrY_G0000593;Parent=HG002_chrY_T0001787;transcript_name=HG002_chrY_T0001787;gene_name=ENSG00000295847;ID=exon:HG002_chrY_T0001787:1;Name=ENSG00000295847;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22766912	22768846	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG002_chrY_T0001787;gene_id=HG002_chrY_G0000593;Parent=HG002_chrY_T0001787;transcript_name=HG002_chrY_T0001787;gene_name=ENSG00000295847;ID=intron:HG002_chrY_T0001787:1;Name=ENSG00000295847;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22768847	22769024	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG002_chrY_T0001787;gene_id=HG002_chrY_G0000593;Parent=HG002_chrY_T0001787;transcript_name=HG002_chrY_T0001787;gene_name=ENSG00000295847;ID=exon:HG002_chrY_T0001787:2;Name=ENSG00000295847;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22769025	22771732	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG002_chrY_T0001787;gene_id=HG002_chrY_G0000593;Parent=HG002_chrY_T0001787;transcript_name=HG002_chrY_T0001787;gene_name=ENSG00000295847;ID=intron:HG002_chrY_T0001787:2;Name=ENSG00000295847;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22771733	22771836	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG002_chrY_T0001787;gene_id=HG002_chrY_G0000593;Parent=HG002_chrY_T0001787;transcript_name=HG002_chrY_T0001787;gene_name=ENSG00000295847;ID=exon:HG002_chrY_T0001787:3;Name=ENSG00000295847;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22771837	22772289	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG002_chrY_T0001787;gene_id=HG002_chrY_G0000593;Parent=HG002_chrY_T0001787;transcript_name=HG002_chrY_T0001787;gene_name=ENSG00000295847;ID=intron:HG002_chrY_T0001787:3;Name=ENSG00000295847;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22772290	22772402	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG002_chrY_T0001787;gene_id=HG002_chrY_G0000593;Parent=HG002_chrY_T0001787;transcript_name=HG002_chrY_T0001787;gene_name=ENSG00000295847;ID=exon:HG002_chrY_T0001787:4;Name=ENSG00000295847;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22772403	22773416	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG002_chrY_T0001787;gene_id=HG002_chrY_G0000593;Parent=HG002_chrY_T0001787;transcript_name=HG002_chrY_T0001787;gene_name=ENSG00000295847;ID=intron:HG002_chrY_T0001787:4;Name=ENSG00000295847;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22773417	22773496	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG002_chrY_T0001787;gene_id=HG002_chrY_G0000593;Parent=HG002_chrY_T0001787;transcript_name=HG002_chrY_T0001787;gene_name=ENSG00000295847;ID=exon:HG002_chrY_T0001787:5;Name=ENSG00000295847;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22773497	22774250	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG002_chrY_T0001787;gene_id=HG002_chrY_G0000593;Parent=HG002_chrY_T0001787;transcript_name=HG002_chrY_T0001787;gene_name=ENSG00000295847;ID=intron:HG002_chrY_T0001787:5;Name=ENSG00000295847;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22774251	22774369	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG002_chrY_T0001787;gene_id=HG002_chrY_G0000593;Parent=HG002_chrY_T0001787;transcript_name=HG002_chrY_T0001787;gene_name=ENSG00000295847;ID=exon:HG002_chrY_T0001787:6;Name=ENSG00000295847;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22775260	22776841	.	+	.	source_gene_common_name=ENSG00000237968;source_gene=ENSG00000237968.1;alternative_source_transcripts=ENST00000426526.1;gene_id=HG002_chrY_G0000594;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000237968;gene_sources=liftoff;ID=HG002_chrY_G0000594;Name=ENSG00000237968
HG002_chrY	CAT	transcript	22775260	22776841	1000	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=HG002_chrY_T0001788;gene_id=HG002_chrY_G0000594;Parent=HG002_chrY_G0000594;transcript_name=HG002_chrY_T0001788;gene_name=ENSG00000237968;ID=HG002_chrY_T0001788;Name=ENSG00000237968
HG002_chrY	CAT	exon	22775260	22775591	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=HG002_chrY_T0001788;gene_id=HG002_chrY_G0000594;Parent=HG002_chrY_T0001788;transcript_name=HG002_chrY_T0001788;gene_name=ENSG00000237968;ID=exon:HG002_chrY_T0001788:0;Name=ENSG00000237968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22775592	22776070	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=HG002_chrY_T0001788;gene_id=HG002_chrY_G0000594;Parent=HG002_chrY_T0001788;transcript_name=HG002_chrY_T0001788;gene_name=ENSG00000237968;ID=intron:HG002_chrY_T0001788:0;Name=ENSG00000237968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22776071	22776109	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=HG002_chrY_T0001788;gene_id=HG002_chrY_G0000594;Parent=HG002_chrY_T0001788;transcript_name=HG002_chrY_T0001788;gene_name=ENSG00000237968;ID=exon:HG002_chrY_T0001788:1;Name=ENSG00000237968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22776110	22776307	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=HG002_chrY_T0001788;gene_id=HG002_chrY_G0000594;Parent=HG002_chrY_T0001788;transcript_name=HG002_chrY_T0001788;gene_name=ENSG00000237968;ID=intron:HG002_chrY_T0001788:1;Name=ENSG00000237968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22776308	22776417	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=HG002_chrY_T0001788;gene_id=HG002_chrY_G0000594;Parent=HG002_chrY_T0001788;transcript_name=HG002_chrY_T0001788;gene_name=ENSG00000237968;ID=exon:HG002_chrY_T0001788:2;Name=ENSG00000237968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22776418	22776504	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=HG002_chrY_T0001788;gene_id=HG002_chrY_G0000594;Parent=HG002_chrY_T0001788;transcript_name=HG002_chrY_T0001788;gene_name=ENSG00000237968;ID=intron:HG002_chrY_T0001788:2;Name=ENSG00000237968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22776505	22776648	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=HG002_chrY_T0001788;gene_id=HG002_chrY_G0000594;Parent=HG002_chrY_T0001788;transcript_name=HG002_chrY_T0001788;gene_name=ENSG00000237968;ID=exon:HG002_chrY_T0001788:3;Name=ENSG00000237968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22776649	22776765	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=HG002_chrY_T0001788;gene_id=HG002_chrY_G0000594;Parent=HG002_chrY_T0001788;transcript_name=HG002_chrY_T0001788;gene_name=ENSG00000237968;ID=intron:HG002_chrY_T0001788:3;Name=ENSG00000237968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22776766	22776841	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=HG002_chrY_T0001788;gene_id=HG002_chrY_G0000594;Parent=HG002_chrY_T0001788;transcript_name=HG002_chrY_T0001788;gene_name=ENSG00000237968;ID=exon:HG002_chrY_T0001788:4;Name=ENSG00000237968;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22780615	22786070	.	-	.	source_gene_common_name=ENSG00000299625;source_gene=ENSG00000299625.1;gene_id=HG002_chrY_G0000595;gene_biotype=lncRNA;gene_name=ENSG00000299625;gene_sources=liftoff;ID=HG002_chrY_G0000595;Name=ENSG00000299625
HG002_chrY	CAT	transcript	22780615	22786069	1000	-	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001789;gene_id=HG002_chrY_G0000595;Parent=HG002_chrY_G0000595;transcript_name=HG002_chrY_T0001789;gene_name=ENSG00000299625;ID=HG002_chrY_T0001789;Name=ENSG00000299625
HG002_chrY	CAT	exon	22780615	22781320	.	-	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001789;gene_id=HG002_chrY_G0000595;Parent=HG002_chrY_T0001789;transcript_name=HG002_chrY_T0001789;gene_name=ENSG00000299625;ID=exon:HG002_chrY_T0001789:0;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22781321	22781684	.	-	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001789;gene_id=HG002_chrY_G0000595;Parent=HG002_chrY_T0001789;transcript_name=HG002_chrY_T0001789;gene_name=ENSG00000299625;ID=intron:HG002_chrY_T0001789:0;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22781685	22781811	.	-	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001789;gene_id=HG002_chrY_G0000595;Parent=HG002_chrY_T0001789;transcript_name=HG002_chrY_T0001789;gene_name=ENSG00000299625;ID=exon:HG002_chrY_T0001789:1;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22781812	22783680	.	-	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001789;gene_id=HG002_chrY_G0000595;Parent=HG002_chrY_T0001789;transcript_name=HG002_chrY_T0001789;gene_name=ENSG00000299625;ID=intron:HG002_chrY_T0001789:1;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22783681	22783814	.	-	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001789;gene_id=HG002_chrY_G0000595;Parent=HG002_chrY_T0001789;transcript_name=HG002_chrY_T0001789;gene_name=ENSG00000299625;ID=exon:HG002_chrY_T0001789:2;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22783815	22785730	.	-	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001789;gene_id=HG002_chrY_G0000595;Parent=HG002_chrY_T0001789;transcript_name=HG002_chrY_T0001789;gene_name=ENSG00000299625;ID=intron:HG002_chrY_T0001789:2;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22785731	22786069	.	-	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001789;gene_id=HG002_chrY_G0000595;Parent=HG002_chrY_T0001789;transcript_name=HG002_chrY_T0001789;gene_name=ENSG00000299625;ID=exon:HG002_chrY_T0001789:3;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	22780621	22786070	1000	-	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001790;gene_id=HG002_chrY_G0000595;Parent=HG002_chrY_G0000595;transcript_name=HG002_chrY_T0001790;gene_name=ENSG00000299625;ID=HG002_chrY_T0001790;Name=ENSG00000299625
HG002_chrY	CAT	exon	22780621	22781320	.	-	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001790;gene_id=HG002_chrY_G0000595;Parent=HG002_chrY_T0001790;transcript_name=HG002_chrY_T0001790;gene_name=ENSG00000299625;ID=exon:HG002_chrY_T0001790:0;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22781321	22781684	.	-	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001790;gene_id=HG002_chrY_G0000595;Parent=HG002_chrY_T0001790;transcript_name=HG002_chrY_T0001790;gene_name=ENSG00000299625;ID=intron:HG002_chrY_T0001790:0;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22781685	22781811	.	-	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001790;gene_id=HG002_chrY_G0000595;Parent=HG002_chrY_T0001790;transcript_name=HG002_chrY_T0001790;gene_name=ENSG00000299625;ID=exon:HG002_chrY_T0001790:1;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22781812	22785730	.	-	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001790;gene_id=HG002_chrY_G0000595;Parent=HG002_chrY_T0001790;transcript_name=HG002_chrY_T0001790;gene_name=ENSG00000299625;ID=intron:HG002_chrY_T0001790:1;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22785731	22786070	.	-	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001790;gene_id=HG002_chrY_G0000595;Parent=HG002_chrY_T0001790;transcript_name=HG002_chrY_T0001790;gene_name=ENSG00000299625;ID=exon:HG002_chrY_T0001790:2;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22807565	22840599	.	+	.	source_gene_common_name=OFD1P8Y;source_gene=ENSG00000231159.1;alternative_source_transcripts=ENST00000449148.1;gene_id=HG002_chrY_G0000596;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P8Y;gene_sources=liftoff;ID=HG002_chrY_G0000596;Name=OFD1P8Y
HG002_chrY	CAT	transcript	22807565	22840599	1000	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG002_chrY_T0001791;gene_id=HG002_chrY_G0000596;Parent=HG002_chrY_G0000596;transcript_name=HG002_chrY_T0001791;gene_name=OFD1P8Y;ID=HG002_chrY_T0001791;Name=OFD1P8Y
HG002_chrY	CAT	exon	22807565	22807671	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG002_chrY_T0001791;gene_id=HG002_chrY_G0000596;Parent=HG002_chrY_T0001791;transcript_name=HG002_chrY_T0001791;gene_name=OFD1P8Y;ID=exon:HG002_chrY_T0001791:0;Name=OFD1P8Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22807672	22809183	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG002_chrY_T0001791;gene_id=HG002_chrY_G0000596;Parent=HG002_chrY_T0001791;transcript_name=HG002_chrY_T0001791;gene_name=OFD1P8Y;ID=intron:HG002_chrY_T0001791:0;Name=OFD1P8Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22809184	22809311	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG002_chrY_T0001791;gene_id=HG002_chrY_G0000596;Parent=HG002_chrY_T0001791;transcript_name=HG002_chrY_T0001791;gene_name=OFD1P8Y;ID=exon:HG002_chrY_T0001791:1;Name=OFD1P8Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22809312	22809845	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG002_chrY_T0001791;gene_id=HG002_chrY_G0000596;Parent=HG002_chrY_T0001791;transcript_name=HG002_chrY_T0001791;gene_name=OFD1P8Y;ID=intron:HG002_chrY_T0001791:1;Name=OFD1P8Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22809846	22809955	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG002_chrY_T0001791;gene_id=HG002_chrY_G0000596;Parent=HG002_chrY_T0001791;transcript_name=HG002_chrY_T0001791;gene_name=OFD1P8Y;ID=exon:HG002_chrY_T0001791:2;Name=OFD1P8Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22809956	22811672	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG002_chrY_T0001791;gene_id=HG002_chrY_G0000596;Parent=HG002_chrY_T0001791;transcript_name=HG002_chrY_T0001791;gene_name=OFD1P8Y;ID=intron:HG002_chrY_T0001791:2;Name=OFD1P8Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22811673	22812288	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG002_chrY_T0001791;gene_id=HG002_chrY_G0000596;Parent=HG002_chrY_T0001791;transcript_name=HG002_chrY_T0001791;gene_name=OFD1P8Y;ID=exon:HG002_chrY_T0001791:3;Name=OFD1P8Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22812289	22812661	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG002_chrY_T0001791;gene_id=HG002_chrY_G0000596;Parent=HG002_chrY_T0001791;transcript_name=HG002_chrY_T0001791;gene_name=OFD1P8Y;ID=intron:HG002_chrY_T0001791:3;Name=OFD1P8Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22812662	22812772	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG002_chrY_T0001791;gene_id=HG002_chrY_G0000596;Parent=HG002_chrY_T0001791;transcript_name=HG002_chrY_T0001791;gene_name=OFD1P8Y;ID=exon:HG002_chrY_T0001791:4;Name=OFD1P8Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22812773	22832112	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG002_chrY_T0001791;gene_id=HG002_chrY_G0000596;Parent=HG002_chrY_T0001791;transcript_name=HG002_chrY_T0001791;gene_name=OFD1P8Y;ID=intron:HG002_chrY_T0001791:4;Name=OFD1P8Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22832113	22832213	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG002_chrY_T0001791;gene_id=HG002_chrY_G0000596;Parent=HG002_chrY_T0001791;transcript_name=HG002_chrY_T0001791;gene_name=OFD1P8Y;ID=exon:HG002_chrY_T0001791:5;Name=OFD1P8Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22832214	22838845	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG002_chrY_T0001791;gene_id=HG002_chrY_G0000596;Parent=HG002_chrY_T0001791;transcript_name=HG002_chrY_T0001791;gene_name=OFD1P8Y;ID=intron:HG002_chrY_T0001791:5;Name=OFD1P8Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22838846	22838997	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG002_chrY_T0001791;gene_id=HG002_chrY_G0000596;Parent=HG002_chrY_T0001791;transcript_name=HG002_chrY_T0001791;gene_name=OFD1P8Y;ID=exon:HG002_chrY_T0001791:6;Name=OFD1P8Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22838998	22840193	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG002_chrY_T0001791;gene_id=HG002_chrY_G0000596;Parent=HG002_chrY_T0001791;transcript_name=HG002_chrY_T0001791;gene_name=OFD1P8Y;ID=intron:HG002_chrY_T0001791:6;Name=OFD1P8Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22840194	22840259	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG002_chrY_T0001791;gene_id=HG002_chrY_G0000596;Parent=HG002_chrY_T0001791;transcript_name=HG002_chrY_T0001791;gene_name=OFD1P8Y;ID=exon:HG002_chrY_T0001791:7;Name=OFD1P8Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22840260	22840557	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG002_chrY_T0001791;gene_id=HG002_chrY_G0000596;Parent=HG002_chrY_T0001791;transcript_name=HG002_chrY_T0001791;gene_name=OFD1P8Y;ID=intron:HG002_chrY_T0001791:7;Name=OFD1P8Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22840558	22840599	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG002_chrY_T0001791;gene_id=HG002_chrY_G0000596;Parent=HG002_chrY_T0001791;transcript_name=HG002_chrY_T0001791;gene_name=OFD1P8Y;ID=exon:HG002_chrY_T0001791:8;Name=OFD1P8Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22836386	22884737	.	-	.	source_gene_common_name=ENSG00000310035;source_gene=ENSG00000310035.1;gene_id=HG002_chrY_G0000597;gene_biotype=lncRNA;gene_name=ENSG00000310035;gene_sources=liftoff;ID=HG002_chrY_G0000597;Name=ENSG00000310035
HG002_chrY	CAT	transcript	22836386	22884676	1000	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG002_chrY_T0001792;gene_id=HG002_chrY_G0000597;Parent=HG002_chrY_G0000597;transcript_name=HG002_chrY_T0001792;gene_name=ENSG00000310035;ID=HG002_chrY_T0001792;Name=ENSG00000310035
HG002_chrY	CAT	exon	22836386	22836660	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG002_chrY_T0001792;gene_id=HG002_chrY_G0000597;Parent=HG002_chrY_T0001792;transcript_name=HG002_chrY_T0001792;gene_name=ENSG00000310035;ID=exon:HG002_chrY_T0001792:0;Name=ENSG00000310035;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22836661	22844206	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG002_chrY_T0001792;gene_id=HG002_chrY_G0000597;Parent=HG002_chrY_T0001792;transcript_name=HG002_chrY_T0001792;gene_name=ENSG00000310035;ID=intron:HG002_chrY_T0001792:0;Name=ENSG00000310035;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22844207	22844509	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG002_chrY_T0001792;gene_id=HG002_chrY_G0000597;Parent=HG002_chrY_T0001792;transcript_name=HG002_chrY_T0001792;gene_name=ENSG00000310035;ID=exon:HG002_chrY_T0001792:1;Name=ENSG00000310035;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22844510	22879686	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG002_chrY_T0001792;gene_id=HG002_chrY_G0000597;Parent=HG002_chrY_T0001792;transcript_name=HG002_chrY_T0001792;gene_name=ENSG00000310035;ID=intron:HG002_chrY_T0001792:1;Name=ENSG00000310035;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22879687	22879848	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG002_chrY_T0001792;gene_id=HG002_chrY_G0000597;Parent=HG002_chrY_T0001792;transcript_name=HG002_chrY_T0001792;gene_name=ENSG00000310035;ID=exon:HG002_chrY_T0001792:2;Name=ENSG00000310035;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22879849	22884412	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG002_chrY_T0001792;gene_id=HG002_chrY_G0000597;Parent=HG002_chrY_T0001792;transcript_name=HG002_chrY_T0001792;gene_name=ENSG00000310035;ID=intron:HG002_chrY_T0001792:2;Name=ENSG00000310035;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22884413	22884676	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG002_chrY_T0001792;gene_id=HG002_chrY_G0000597;Parent=HG002_chrY_T0001792;transcript_name=HG002_chrY_T0001792;gene_name=ENSG00000310035;ID=exon:HG002_chrY_T0001792:3;Name=ENSG00000310035;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	22843881	22884737	1000	-	.	source_transcript=ENST00000846706.1;source_transcript_name=ENST00000846706;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846706.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG002_chrY_T0001793;gene_id=HG002_chrY_G0000597;Parent=HG002_chrY_G0000597;transcript_name=HG002_chrY_T0001793;gene_name=ENSG00000310035;ID=HG002_chrY_T0001793;Name=ENSG00000310035
HG002_chrY	CAT	exon	22843881	22844509	.	-	.	source_transcript=ENST00000846706.1;source_transcript_name=ENST00000846706;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG002_chrY_T0001793;gene_id=HG002_chrY_G0000597;Parent=HG002_chrY_T0001793;transcript_name=HG002_chrY_T0001793;gene_name=ENSG00000310035;ID=exon:HG002_chrY_T0001793:0;Name=ENSG00000310035;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22844510	22879686	.	-	.	source_transcript=ENST00000846706.1;source_transcript_name=ENST00000846706;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG002_chrY_T0001793;gene_id=HG002_chrY_G0000597;Parent=HG002_chrY_T0001793;transcript_name=HG002_chrY_T0001793;gene_name=ENSG00000310035;ID=intron:HG002_chrY_T0001793:0;Name=ENSG00000310035;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22879687	22879848	.	-	.	source_transcript=ENST00000846706.1;source_transcript_name=ENST00000846706;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG002_chrY_T0001793;gene_id=HG002_chrY_G0000597;Parent=HG002_chrY_T0001793;transcript_name=HG002_chrY_T0001793;gene_name=ENSG00000310035;ID=exon:HG002_chrY_T0001793:1;Name=ENSG00000310035;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22879849	22884412	.	-	.	source_transcript=ENST00000846706.1;source_transcript_name=ENST00000846706;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG002_chrY_T0001793;gene_id=HG002_chrY_G0000597;Parent=HG002_chrY_T0001793;transcript_name=HG002_chrY_T0001793;gene_name=ENSG00000310035;ID=intron:HG002_chrY_T0001793:1;Name=ENSG00000310035;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22884413	22884737	.	-	.	source_transcript=ENST00000846706.1;source_transcript_name=ENST00000846706;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG002_chrY_T0001793;gene_id=HG002_chrY_G0000597;Parent=HG002_chrY_T0001793;transcript_name=HG002_chrY_T0001793;gene_name=ENSG00000310035;ID=exon:HG002_chrY_T0001793:2;Name=ENSG00000310035;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	22861383	22884723	1000	-	.	source_transcript=ENST00000846707.1;source_transcript_name=ENST00000846707;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846707.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG002_chrY_T0001794;gene_id=HG002_chrY_G0000597;Parent=HG002_chrY_G0000597;transcript_name=HG002_chrY_T0001794;gene_name=ENSG00000310035;ID=HG002_chrY_T0001794;Name=ENSG00000310035
HG002_chrY	CAT	exon	22861383	22861750	.	-	.	source_transcript=ENST00000846707.1;source_transcript_name=ENST00000846707;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG002_chrY_T0001794;gene_id=HG002_chrY_G0000597;Parent=HG002_chrY_T0001794;transcript_name=HG002_chrY_T0001794;gene_name=ENSG00000310035;ID=exon:HG002_chrY_T0001794:0;Name=ENSG00000310035;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22861751	22884412	.	-	.	source_transcript=ENST00000846707.1;source_transcript_name=ENST00000846707;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG002_chrY_T0001794;gene_id=HG002_chrY_G0000597;Parent=HG002_chrY_T0001794;transcript_name=HG002_chrY_T0001794;gene_name=ENSG00000310035;ID=intron:HG002_chrY_T0001794:0;Name=ENSG00000310035;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22884413	22884723	.	-	.	source_transcript=ENST00000846707.1;source_transcript_name=ENST00000846707;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG002_chrY_T0001794;gene_id=HG002_chrY_G0000597;Parent=HG002_chrY_T0001794;transcript_name=HG002_chrY_T0001794;gene_name=ENSG00000310035;ID=exon:HG002_chrY_T0001794:1;Name=ENSG00000310035;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	22861458	22884661	1000	-	.	source_transcript=ENST00000846708.1;source_transcript_name=ENST00000846708;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846708.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG002_chrY_T0001795;gene_id=HG002_chrY_G0000597;Parent=HG002_chrY_G0000597;transcript_name=HG002_chrY_T0001795;gene_name=ENSG00000310035;ID=HG002_chrY_T0001795;Name=ENSG00000310035
HG002_chrY	CAT	exon	22861458	22861750	.	-	.	source_transcript=ENST00000846708.1;source_transcript_name=ENST00000846708;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG002_chrY_T0001795;gene_id=HG002_chrY_G0000597;Parent=HG002_chrY_T0001795;transcript_name=HG002_chrY_T0001795;gene_name=ENSG00000310035;ID=exon:HG002_chrY_T0001795:0;Name=ENSG00000310035;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22861751	22879690	.	-	.	source_transcript=ENST00000846708.1;source_transcript_name=ENST00000846708;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG002_chrY_T0001795;gene_id=HG002_chrY_G0000597;Parent=HG002_chrY_T0001795;transcript_name=HG002_chrY_T0001795;gene_name=ENSG00000310035;ID=intron:HG002_chrY_T0001795:0;Name=ENSG00000310035;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22879691	22879848	.	-	.	source_transcript=ENST00000846708.1;source_transcript_name=ENST00000846708;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG002_chrY_T0001795;gene_id=HG002_chrY_G0000597;Parent=HG002_chrY_T0001795;transcript_name=HG002_chrY_T0001795;gene_name=ENSG00000310035;ID=exon:HG002_chrY_T0001795:1;Name=ENSG00000310035;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22879849	22884412	.	-	.	source_transcript=ENST00000846708.1;source_transcript_name=ENST00000846708;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG002_chrY_T0001795;gene_id=HG002_chrY_G0000597;Parent=HG002_chrY_T0001795;transcript_name=HG002_chrY_T0001795;gene_name=ENSG00000310035;ID=intron:HG002_chrY_T0001795:1;Name=ENSG00000310035;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22884413	22884661	.	-	.	source_transcript=ENST00000846708.1;source_transcript_name=ENST00000846708;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG002_chrY_T0001795;gene_id=HG002_chrY_G0000597;Parent=HG002_chrY_T0001795;transcript_name=HG002_chrY_T0001795;gene_name=ENSG00000310035;ID=exon:HG002_chrY_T0001795:2;Name=ENSG00000310035;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22863581	22866749	.	+	.	source_gene_common_name=ENSG00000295422;source_gene=ENSG00000295422.1;gene_id=HG002_chrY_G0000598;gene_biotype=lncRNA;gene_name=ENSG00000295422;gene_sources=liftoff;ID=HG002_chrY_G0000598;Name=ENSG00000295422
HG002_chrY	CAT	transcript	22863581	22866749	1000	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG002_chrY_T0001796;gene_id=HG002_chrY_G0000598;Parent=HG002_chrY_G0000598;transcript_name=HG002_chrY_T0001796;gene_name=ENSG00000295422;ID=HG002_chrY_T0001796;Name=ENSG00000295422
HG002_chrY	CAT	exon	22863581	22863691	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG002_chrY_T0001796;gene_id=HG002_chrY_G0000598;Parent=HG002_chrY_T0001796;transcript_name=HG002_chrY_T0001796;gene_name=ENSG00000295422;ID=exon:HG002_chrY_T0001796:0;Name=ENSG00000295422;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22863692	22863808	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG002_chrY_T0001796;gene_id=HG002_chrY_G0000598;Parent=HG002_chrY_T0001796;transcript_name=HG002_chrY_T0001796;gene_name=ENSG00000295422;ID=intron:HG002_chrY_T0001796:0;Name=ENSG00000295422;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22863809	22863869	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG002_chrY_T0001796;gene_id=HG002_chrY_G0000598;Parent=HG002_chrY_T0001796;transcript_name=HG002_chrY_T0001796;gene_name=ENSG00000295422;ID=exon:HG002_chrY_T0001796:1;Name=ENSG00000295422;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22863870	22865404	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG002_chrY_T0001796;gene_id=HG002_chrY_G0000598;Parent=HG002_chrY_T0001796;transcript_name=HG002_chrY_T0001796;gene_name=ENSG00000295422;ID=intron:HG002_chrY_T0001796:1;Name=ENSG00000295422;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22865405	22866749	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG002_chrY_T0001796;gene_id=HG002_chrY_G0000598;Parent=HG002_chrY_T0001796;transcript_name=HG002_chrY_T0001796;gene_name=ENSG00000295422;ID=exon:HG002_chrY_T0001796:2;Name=ENSG00000295422;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22883813	22884606	.	-	.	source_gene_common_name=HSFY5P;source_gene=ENSG00000232475.1;gene_id=HG002_chrY_G0000599;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=HSFY5P;gene_sources=liftoff;ID=HG002_chrY_G0000599;Name=HSFY5P
HG002_chrY	CAT	transcript	22883813	22884606	1000	-	.	source_transcript=ENST00000453726.1;source_transcript_name=HSFY5P-201;source_gene=ENSG00000232475.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232475.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000453726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY5P;transcript_id=HG002_chrY_T0001797;gene_id=HG002_chrY_G0000599;Parent=HG002_chrY_G0000599;transcript_name=HG002_chrY_T0001797;gene_name=HSFY5P;ID=HG002_chrY_T0001797;Name=HSFY5P
HG002_chrY	CAT	exon	22883813	22883962	.	-	.	source_transcript=ENST00000453726.1;source_transcript_name=HSFY5P-201;source_gene=ENSG00000232475.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232475.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000453726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY5P;transcript_id=HG002_chrY_T0001797;gene_id=HG002_chrY_G0000599;Parent=HG002_chrY_T0001797;transcript_name=HG002_chrY_T0001797;gene_name=HSFY5P;ID=exon:HG002_chrY_T0001797:0;Name=HSFY5P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22883963	22884447	.	-	.	source_transcript=ENST00000453726.1;source_transcript_name=HSFY5P-201;source_gene=ENSG00000232475.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232475.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000453726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY5P;transcript_id=HG002_chrY_T0001797;gene_id=HG002_chrY_G0000599;Parent=HG002_chrY_T0001797;transcript_name=HG002_chrY_T0001797;gene_name=HSFY5P;ID=intron:HG002_chrY_T0001797:0;Name=HSFY5P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22884448	22884606	.	-	.	source_transcript=ENST00000453726.1;source_transcript_name=HSFY5P-201;source_gene=ENSG00000232475.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232475.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000453726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY5P;transcript_id=HG002_chrY_T0001797;gene_id=HG002_chrY_G0000599;Parent=HG002_chrY_T0001797;transcript_name=HG002_chrY_T0001797;gene_name=HSFY5P;ID=exon:HG002_chrY_T0001797:1;Name=HSFY5P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22885014	22893372	.	-	.	source_gene_common_name=USP9YP17;source_gene=ENSG00000229553.1;alternative_source_transcripts=ENST00000444617.1;gene_id=HG002_chrY_G0000600;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP17;gene_sources=liftoff;ID=HG002_chrY_G0000600;Name=USP9YP17
HG002_chrY	CAT	transcript	22885014	22893372	1000	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=HG002_chrY_T0001798;gene_id=HG002_chrY_G0000600;Parent=HG002_chrY_G0000600;transcript_name=HG002_chrY_T0001798;gene_name=USP9YP17;ID=HG002_chrY_T0001798;Name=USP9YP17
HG002_chrY	CAT	exon	22885014	22885052	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=HG002_chrY_T0001798;gene_id=HG002_chrY_G0000600;Parent=HG002_chrY_T0001798;transcript_name=HG002_chrY_T0001798;gene_name=USP9YP17;ID=exon:HG002_chrY_T0001798:0;Name=USP9YP17;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22885053	22886768	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=HG002_chrY_T0001798;gene_id=HG002_chrY_G0000600;Parent=HG002_chrY_T0001798;transcript_name=HG002_chrY_T0001798;gene_name=USP9YP17;ID=intron:HG002_chrY_T0001798:0;Name=USP9YP17;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22886769	22886897	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=HG002_chrY_T0001798;gene_id=HG002_chrY_G0000600;Parent=HG002_chrY_T0001798;transcript_name=HG002_chrY_T0001798;gene_name=USP9YP17;ID=exon:HG002_chrY_T0001798:1;Name=USP9YP17;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22886898	22889255	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=HG002_chrY_T0001798;gene_id=HG002_chrY_G0000600;Parent=HG002_chrY_T0001798;transcript_name=HG002_chrY_T0001798;gene_name=USP9YP17;ID=intron:HG002_chrY_T0001798:1;Name=USP9YP17;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22889256	22889444	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=HG002_chrY_T0001798;gene_id=HG002_chrY_G0000600;Parent=HG002_chrY_T0001798;transcript_name=HG002_chrY_T0001798;gene_name=USP9YP17;ID=exon:HG002_chrY_T0001798:2;Name=USP9YP17;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22889445	22891230	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=HG002_chrY_T0001798;gene_id=HG002_chrY_G0000600;Parent=HG002_chrY_T0001798;transcript_name=HG002_chrY_T0001798;gene_name=USP9YP17;ID=intron:HG002_chrY_T0001798:2;Name=USP9YP17;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22891231	22891348	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=HG002_chrY_T0001798;gene_id=HG002_chrY_G0000600;Parent=HG002_chrY_T0001798;transcript_name=HG002_chrY_T0001798;gene_name=USP9YP17;ID=exon:HG002_chrY_T0001798:3;Name=USP9YP17;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22891349	22893151	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=HG002_chrY_T0001798;gene_id=HG002_chrY_G0000600;Parent=HG002_chrY_T0001798;transcript_name=HG002_chrY_T0001798;gene_name=USP9YP17;ID=intron:HG002_chrY_T0001798:3;Name=USP9YP17;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22893152	22893372	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=HG002_chrY_T0001798;gene_id=HG002_chrY_G0000600;Parent=HG002_chrY_T0001798;transcript_name=HG002_chrY_T0001798;gene_name=USP9YP17;ID=exon:HG002_chrY_T0001798:4;Name=USP9YP17;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22899957	22900971	.	+	.	source_gene_common_name=CDY12P;source_gene=ENSG00000228850.1;alternative_source_transcripts=ENST00000440679.1;gene_id=HG002_chrY_G0000601;gene_biotype=unprocessed_pseudogene;gene_name=CDY12P;gene_sources=liftoff;ID=HG002_chrY_G0000601;Name=CDY12P
HG002_chrY	CAT	transcript	22899957	22900971	1000	+	.	source_transcript=ENST00000440679.1;source_transcript_name=CDY12P-201;source_gene=ENSG00000228850.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228850.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440679.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY12P;alternative_source_transcripts=ENST00000440679.1;transcript_id=HG002_chrY_T0001799;gene_id=HG002_chrY_G0000601;Parent=HG002_chrY_G0000601;transcript_name=HG002_chrY_T0001799;gene_name=CDY12P;ID=HG002_chrY_T0001799;Name=CDY12P
HG002_chrY	CAT	exon	22899957	22900971	.	+	.	source_transcript=ENST00000440679.1;source_transcript_name=CDY12P-201;source_gene=ENSG00000228850.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228850.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440679.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY12P;alternative_source_transcripts=ENST00000440679.1;transcript_id=HG002_chrY_T0001799;gene_id=HG002_chrY_G0000601;Parent=HG002_chrY_T0001799;transcript_name=HG002_chrY_T0001799;gene_name=CDY12P;ID=exon:HG002_chrY_T0001799:0;Name=CDY12P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22904079	22904410	.	+	.	source_gene_common_name=ELOCP15;source_gene=ENSG00000232029.1;alternative_source_transcripts=ENST00000442090.1;gene_id=HG002_chrY_G0000602;gene_biotype=processed_pseudogene;gene_name=ELOCP15;gene_sources=liftoff;ID=HG002_chrY_G0000602;Name=ELOCP15
HG002_chrY	CAT	transcript	22904079	22904410	1000	+	.	source_transcript=ENST00000442090.1;source_transcript_name=ELOCP15-201;source_gene=ENSG00000232029.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232029.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000442090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442090.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP15;alternative_source_transcripts=ENST00000442090.1;transcript_id=HG002_chrY_T0001800;gene_id=HG002_chrY_G0000602;Parent=HG002_chrY_G0000602;transcript_name=HG002_chrY_T0001800;gene_name=ELOCP15;ID=HG002_chrY_T0001800;Name=ELOCP15
HG002_chrY	CAT	exon	22904079	22904410	.	+	.	source_transcript=ENST00000442090.1;source_transcript_name=ELOCP15-201;source_gene=ENSG00000232029.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232029.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000442090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442090.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP15;alternative_source_transcripts=ENST00000442090.1;transcript_id=HG002_chrY_T0001800;gene_id=HG002_chrY_G0000602;Parent=HG002_chrY_T0001800;transcript_name=HG002_chrY_T0001800;gene_name=ELOCP15;ID=exon:HG002_chrY_T0001800:0;Name=ELOCP15;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22907015	22982743	.	-	.	source_gene_common_name=ENSG00000236951;source_gene=ENSG00000236951.7;alternative_source_transcripts=ENST00000303804.6,ENST00000303728.6;gene_id=HG002_chrY_G0000603;gene_biotype=lncRNA;gene_name=ENSG00000236951;gene_sources=liftoff;ID=HG002_chrY_G0000603;Name=ENSG00000236951
HG002_chrY	CAT	transcript	22907015	22937642	1000	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6,ENST00000303728.6;transcript_id=HG002_chrY_T0001801;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_G0000603;transcript_name=HG002_chrY_T0001801;gene_name=ENSG00000236951;ID=HG002_chrY_T0001801;Name=ENSG00000236951
HG002_chrY	CAT	exon	22907015	22907840	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6,ENST00000303728.6;transcript_id=HG002_chrY_T0001801;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001801;transcript_name=HG002_chrY_T0001801;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001801:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22907841	22917330	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6,ENST00000303728.6;transcript_id=HG002_chrY_T0001801;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001801;transcript_name=HG002_chrY_T0001801;gene_name=ENSG00000236951;ID=intron:HG002_chrY_T0001801:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22917331	22917446	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6,ENST00000303728.6;transcript_id=HG002_chrY_T0001801;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001801;transcript_name=HG002_chrY_T0001801;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001801:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22917447	22920021	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6,ENST00000303728.6;transcript_id=HG002_chrY_T0001801;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001801;transcript_name=HG002_chrY_T0001801;gene_name=ENSG00000236951;ID=intron:HG002_chrY_T0001801:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22920022	22920142	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6,ENST00000303728.6;transcript_id=HG002_chrY_T0001801;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001801;transcript_name=HG002_chrY_T0001801;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001801:2;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22920143	22930983	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6,ENST00000303728.6;transcript_id=HG002_chrY_T0001801;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001801;transcript_name=HG002_chrY_T0001801;gene_name=ENSG00000236951;ID=intron:HG002_chrY_T0001801:2;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22930984	22931070	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6,ENST00000303728.6;transcript_id=HG002_chrY_T0001801;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001801;transcript_name=HG002_chrY_T0001801;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001801:3;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22931071	22931171	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6,ENST00000303728.6;transcript_id=HG002_chrY_T0001801;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001801;transcript_name=HG002_chrY_T0001801;gene_name=ENSG00000236951;ID=intron:HG002_chrY_T0001801:3;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22931172	22931260	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6,ENST00000303728.6;transcript_id=HG002_chrY_T0001801;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001801;transcript_name=HG002_chrY_T0001801;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001801:4;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22931261	22937377	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6,ENST00000303728.6;transcript_id=HG002_chrY_T0001801;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001801;transcript_name=HG002_chrY_T0001801;gene_name=ENSG00000236951;ID=intron:HG002_chrY_T0001801:4;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22937378	22937642	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6,ENST00000303728.6;transcript_id=HG002_chrY_T0001801;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001801;transcript_name=HG002_chrY_T0001801;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001801:5;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	22907015	22937642	1000	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2,ENST00000477123.2;transcript_id=HG002_chrY_T0001802;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_G0000603;transcript_name=HG002_chrY_T0001802;gene_name=ENSG00000236951;ID=HG002_chrY_T0001802;Name=ENSG00000236951
HG002_chrY	CAT	exon	22907015	22907840	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2,ENST00000477123.2;transcript_id=HG002_chrY_T0001802;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001802;transcript_name=HG002_chrY_T0001802;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001802:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22907841	22908902	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2,ENST00000477123.2;transcript_id=HG002_chrY_T0001802;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001802;transcript_name=HG002_chrY_T0001802;gene_name=ENSG00000236951;ID=intron:HG002_chrY_T0001802:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22908903	22909017	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2,ENST00000477123.2;transcript_id=HG002_chrY_T0001802;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001802;transcript_name=HG002_chrY_T0001802;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001802:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22909018	22917330	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2,ENST00000477123.2;transcript_id=HG002_chrY_T0001802;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001802;transcript_name=HG002_chrY_T0001802;gene_name=ENSG00000236951;ID=intron:HG002_chrY_T0001802:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22917331	22917446	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2,ENST00000477123.2;transcript_id=HG002_chrY_T0001802;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001802;transcript_name=HG002_chrY_T0001802;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001802:2;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22917447	22920021	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2,ENST00000477123.2;transcript_id=HG002_chrY_T0001802;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001802;transcript_name=HG002_chrY_T0001802;gene_name=ENSG00000236951;ID=intron:HG002_chrY_T0001802:2;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22920022	22920142	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2,ENST00000477123.2;transcript_id=HG002_chrY_T0001802;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001802;transcript_name=HG002_chrY_T0001802;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001802:3;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22920143	22930983	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2,ENST00000477123.2;transcript_id=HG002_chrY_T0001802;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001802;transcript_name=HG002_chrY_T0001802;gene_name=ENSG00000236951;ID=intron:HG002_chrY_T0001802:3;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22930984	22931070	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2,ENST00000477123.2;transcript_id=HG002_chrY_T0001802;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001802;transcript_name=HG002_chrY_T0001802;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001802:4;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22931071	22931171	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2,ENST00000477123.2;transcript_id=HG002_chrY_T0001802;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001802;transcript_name=HG002_chrY_T0001802;gene_name=ENSG00000236951;ID=intron:HG002_chrY_T0001802:4;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22931172	22931260	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2,ENST00000477123.2;transcript_id=HG002_chrY_T0001802;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001802;transcript_name=HG002_chrY_T0001802;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001802:5;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22931261	22937377	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2,ENST00000477123.2;transcript_id=HG002_chrY_T0001802;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001802;transcript_name=HG002_chrY_T0001802;gene_name=ENSG00000236951;ID=intron:HG002_chrY_T0001802:5;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22937378	22937642	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2,ENST00000477123.2;transcript_id=HG002_chrY_T0001802;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001802;transcript_name=HG002_chrY_T0001802;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001802:6;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	22936087	22941142	1000	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5;transcript_id=HG002_chrY_T0001803;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_G0000603;transcript_name=HG002_chrY_T0001803;gene_name=ENSG00000236951;ID=HG002_chrY_T0001803;Name=ENSG00000236951
HG002_chrY	CAT	exon	22936087	22936328	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5;transcript_id=HG002_chrY_T0001803;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001803;transcript_name=HG002_chrY_T0001803;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001803:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22936329	22937377	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5;transcript_id=HG002_chrY_T0001803;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001803;transcript_name=HG002_chrY_T0001803;gene_name=ENSG00000236951;ID=intron:HG002_chrY_T0001803:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22937378	22937642	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5;transcript_id=HG002_chrY_T0001803;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001803;transcript_name=HG002_chrY_T0001803;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001803:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22937643	22938157	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5;transcript_id=HG002_chrY_T0001803;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001803;transcript_name=HG002_chrY_T0001803;gene_name=ENSG00000236951;ID=intron:HG002_chrY_T0001803:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22938158	22938275	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5;transcript_id=HG002_chrY_T0001803;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001803;transcript_name=HG002_chrY_T0001803;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001803:2;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22938276	22941022	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5;transcript_id=HG002_chrY_T0001803;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001803;transcript_name=HG002_chrY_T0001803;gene_name=ENSG00000236951;ID=intron:HG002_chrY_T0001803:2;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22941023	22941142	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5;transcript_id=HG002_chrY_T0001803;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001803;transcript_name=HG002_chrY_T0001803;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001803:3;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	22936778	22956740	1000	-	.	source_transcript=ENST00000775784.1;source_transcript_name=ENST00000775784;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775784.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775784.1;transcript_id=HG002_chrY_T0001804;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_G0000603;transcript_name=HG002_chrY_T0001804;gene_name=ENSG00000236951;ID=HG002_chrY_T0001804;Name=ENSG00000236951
HG002_chrY	CAT	exon	22936778	22937642	.	-	.	source_transcript=ENST00000775784.1;source_transcript_name=ENST00000775784;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775784.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775784.1;transcript_id=HG002_chrY_T0001804;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001804;transcript_name=HG002_chrY_T0001804;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001804:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22937643	22938157	.	-	.	source_transcript=ENST00000775784.1;source_transcript_name=ENST00000775784;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775784.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775784.1;transcript_id=HG002_chrY_T0001804;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001804;transcript_name=HG002_chrY_T0001804;gene_name=ENSG00000236951;ID=intron:HG002_chrY_T0001804:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22938158	22938279	.	-	.	source_transcript=ENST00000775784.1;source_transcript_name=ENST00000775784;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775784.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775784.1;transcript_id=HG002_chrY_T0001804;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001804;transcript_name=HG002_chrY_T0001804;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001804:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22938280	22956543	.	-	.	source_transcript=ENST00000775784.1;source_transcript_name=ENST00000775784;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775784.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775784.1;transcript_id=HG002_chrY_T0001804;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001804;transcript_name=HG002_chrY_T0001804;gene_name=ENSG00000236951;ID=intron:HG002_chrY_T0001804:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22956544	22956740	.	-	.	source_transcript=ENST00000775784.1;source_transcript_name=ENST00000775784;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775784.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775784.1;transcript_id=HG002_chrY_T0001804;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001804;transcript_name=HG002_chrY_T0001804;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001804:2;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	22936965	22982743	1000	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG002_chrY_T0001805;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_G0000603;transcript_name=HG002_chrY_T0001805;gene_name=ENSG00000236951;ID=HG002_chrY_T0001805;Name=ENSG00000236951
HG002_chrY	CAT	exon	22936965	22937642	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG002_chrY_T0001805;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001805;transcript_name=HG002_chrY_T0001805;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001805:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22937643	22938157	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG002_chrY_T0001805;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001805;transcript_name=HG002_chrY_T0001805;gene_name=ENSG00000236951;ID=intron:HG002_chrY_T0001805:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22938158	22938275	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG002_chrY_T0001805;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001805;transcript_name=HG002_chrY_T0001805;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001805:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22938276	22938819	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG002_chrY_T0001805;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001805;transcript_name=HG002_chrY_T0001805;gene_name=ENSG00000236951;ID=intron:HG002_chrY_T0001805:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22938820	22939016	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG002_chrY_T0001805;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001805;transcript_name=HG002_chrY_T0001805;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001805:2;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22939017	22939136	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG002_chrY_T0001805;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001805;transcript_name=HG002_chrY_T0001805;gene_name=ENSG00000236951;ID=intron:HG002_chrY_T0001805:2;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22939137	22939222	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG002_chrY_T0001805;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001805;transcript_name=HG002_chrY_T0001805;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001805:3;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22939223	22941022	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG002_chrY_T0001805;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001805;transcript_name=HG002_chrY_T0001805;gene_name=ENSG00000236951;ID=intron:HG002_chrY_T0001805:3;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22941023	22941358	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG002_chrY_T0001805;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001805;transcript_name=HG002_chrY_T0001805;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001805:4;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22941359	22942824	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG002_chrY_T0001805;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001805;transcript_name=HG002_chrY_T0001805;gene_name=ENSG00000236951;ID=intron:HG002_chrY_T0001805:4;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22942825	22942914	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG002_chrY_T0001805;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001805;transcript_name=HG002_chrY_T0001805;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001805:5;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22942915	22956543	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG002_chrY_T0001805;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001805;transcript_name=HG002_chrY_T0001805;gene_name=ENSG00000236951;ID=intron:HG002_chrY_T0001805:5;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22956544	22956897	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG002_chrY_T0001805;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001805;transcript_name=HG002_chrY_T0001805;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001805:6;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22956898	22957327	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG002_chrY_T0001805;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001805;transcript_name=HG002_chrY_T0001805;gene_name=ENSG00000236951;ID=intron:HG002_chrY_T0001805:6;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22957328	22957446	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG002_chrY_T0001805;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001805;transcript_name=HG002_chrY_T0001805;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001805:7;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22957447	22964624	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG002_chrY_T0001805;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001805;transcript_name=HG002_chrY_T0001805;gene_name=ENSG00000236951;ID=intron:HG002_chrY_T0001805:7;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22964625	22964710	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG002_chrY_T0001805;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001805;transcript_name=HG002_chrY_T0001805;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001805:8;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22964711	22965018	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG002_chrY_T0001805;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001805;transcript_name=HG002_chrY_T0001805;gene_name=ENSG00000236951;ID=intron:HG002_chrY_T0001805:8;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22965019	22965241	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG002_chrY_T0001805;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001805;transcript_name=HG002_chrY_T0001805;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001805:9;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22965242	22975208	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG002_chrY_T0001805;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001805;transcript_name=HG002_chrY_T0001805;gene_name=ENSG00000236951;ID=intron:HG002_chrY_T0001805:9;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22975209	22975349	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG002_chrY_T0001805;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001805;transcript_name=HG002_chrY_T0001805;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001805:10;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22975350	22981898	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG002_chrY_T0001805;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001805;transcript_name=HG002_chrY_T0001805;gene_name=ENSG00000236951;ID=intron:HG002_chrY_T0001805:10;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22981899	22982208	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG002_chrY_T0001805;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001805;transcript_name=HG002_chrY_T0001805;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001805:11;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22982209	22982542	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG002_chrY_T0001805;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001805;transcript_name=HG002_chrY_T0001805;gene_name=ENSG00000236951;ID=intron:HG002_chrY_T0001805:11;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22982543	22982743	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG002_chrY_T0001805;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001805;transcript_name=HG002_chrY_T0001805;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001805:12;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	22954738	22956750	1000	-	.	source_transcript=ENST00000775785.1;source_transcript_name=ENST00000775785;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775785.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775785.1;transcript_id=HG002_chrY_T0001806;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_G0000603;transcript_name=HG002_chrY_T0001806;gene_name=ENSG00000236951;ID=HG002_chrY_T0001806;Name=ENSG00000236951
HG002_chrY	CAT	exon	22954738	22954947	.	-	.	source_transcript=ENST00000775785.1;source_transcript_name=ENST00000775785;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775785.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775785.1;transcript_id=HG002_chrY_T0001806;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001806;transcript_name=HG002_chrY_T0001806;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001806:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22954948	22956543	.	-	.	source_transcript=ENST00000775785.1;source_transcript_name=ENST00000775785;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775785.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775785.1;transcript_id=HG002_chrY_T0001806;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001806;transcript_name=HG002_chrY_T0001806;gene_name=ENSG00000236951;ID=intron:HG002_chrY_T0001806:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22956544	22956750	.	-	.	source_transcript=ENST00000775785.1;source_transcript_name=ENST00000775785;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775785.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775785.1;transcript_id=HG002_chrY_T0001806;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001806;transcript_name=HG002_chrY_T0001806;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001806:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	22971648	22982669	1000	-	.	source_transcript=ENST00000774613.1;source_transcript_name=ENST00000774613;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774613.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000774613.1;transcript_id=HG002_chrY_T0001808;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_G0000603;transcript_name=HG002_chrY_T0001808;gene_name=ENSG00000236951;ID=HG002_chrY_T0001808;Name=ENSG00000236951
HG002_chrY	CAT	exon	22971648	22972442	.	-	.	source_transcript=ENST00000774613.1;source_transcript_name=ENST00000774613;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000774613.1;transcript_id=HG002_chrY_T0001808;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001808;transcript_name=HG002_chrY_T0001808;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001808:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22972443	22975208	.	-	.	source_transcript=ENST00000774613.1;source_transcript_name=ENST00000774613;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000774613.1;transcript_id=HG002_chrY_T0001808;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001808;transcript_name=HG002_chrY_T0001808;gene_name=ENSG00000236951;ID=intron:HG002_chrY_T0001808:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22975209	22975349	.	-	.	source_transcript=ENST00000774613.1;source_transcript_name=ENST00000774613;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000774613.1;transcript_id=HG002_chrY_T0001808;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001808;transcript_name=HG002_chrY_T0001808;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001808:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22975350	22982542	.	-	.	source_transcript=ENST00000774613.1;source_transcript_name=ENST00000774613;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000774613.1;transcript_id=HG002_chrY_T0001808;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001808;transcript_name=HG002_chrY_T0001808;gene_name=ENSG00000236951;ID=intron:HG002_chrY_T0001808:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22982543	22982669	.	-	.	source_transcript=ENST00000774613.1;source_transcript_name=ENST00000774613;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000774613.1;transcript_id=HG002_chrY_T0001808;gene_id=HG002_chrY_G0000603;Parent=HG002_chrY_T0001808;transcript_name=HG002_chrY_T0001808;gene_name=ENSG00000236951;ID=exon:HG002_chrY_T0001808:2;Name=ENSG00000236951;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	22967204	22982090	.	+	.	source_gene_common_name=TTTY6B;source_gene=ENSG00000131548.8;alternative_source_transcripts=ENST00000253848.4,ENST00000253838.4;gene_id=HG002_chrY_G0000604;gene_biotype=lncRNA;gene_name=TTTY6B;gene_sources=liftoff;ID=HG002_chrY_G0000604;Name=TTTY6B
HG002_chrY	CAT	transcript	22967204	22982090	1000	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253838.4;transcript_id=HG002_chrY_T0001807;gene_id=HG002_chrY_G0000604;Parent=HG002_chrY_G0000604;transcript_name=HG002_chrY_T0001807;gene_name=TTTY6B;ID=HG002_chrY_T0001807;Name=TTTY6B
HG002_chrY	CAT	exon	22967204	22967258	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253838.4;transcript_id=HG002_chrY_T0001807;gene_id=HG002_chrY_G0000604;Parent=HG002_chrY_T0001807;transcript_name=HG002_chrY_T0001807;gene_name=TTTY6B;ID=exon:HG002_chrY_T0001807:0;Name=TTTY6B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22967259	22969637	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253838.4;transcript_id=HG002_chrY_T0001807;gene_id=HG002_chrY_G0000604;Parent=HG002_chrY_T0001807;transcript_name=HG002_chrY_T0001807;gene_name=TTTY6B;ID=intron:HG002_chrY_T0001807:0;Name=TTTY6B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22969638	22969711	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253838.4;transcript_id=HG002_chrY_T0001807;gene_id=HG002_chrY_G0000604;Parent=HG002_chrY_T0001807;transcript_name=HG002_chrY_T0001807;gene_name=TTTY6B;ID=exon:HG002_chrY_T0001807:1;Name=TTTY6B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22969712	22974452	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253838.4;transcript_id=HG002_chrY_T0001807;gene_id=HG002_chrY_G0000604;Parent=HG002_chrY_T0001807;transcript_name=HG002_chrY_T0001807;gene_name=TTTY6B;ID=intron:HG002_chrY_T0001807:1;Name=TTTY6B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22974453	22974614	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253838.4;transcript_id=HG002_chrY_T0001807;gene_id=HG002_chrY_G0000604;Parent=HG002_chrY_T0001807;transcript_name=HG002_chrY_T0001807;gene_name=TTTY6B;ID=exon:HG002_chrY_T0001807:2;Name=TTTY6B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22974615	22976896	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253838.4;transcript_id=HG002_chrY_T0001807;gene_id=HG002_chrY_G0000604;Parent=HG002_chrY_T0001807;transcript_name=HG002_chrY_T0001807;gene_name=TTTY6B;ID=intron:HG002_chrY_T0001807:2;Name=TTTY6B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22976897	22977057	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253838.4;transcript_id=HG002_chrY_T0001807;gene_id=HG002_chrY_G0000604;Parent=HG002_chrY_T0001807;transcript_name=HG002_chrY_T0001807;gene_name=TTTY6B;ID=exon:HG002_chrY_T0001807:3;Name=TTTY6B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22977058	22980224	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253838.4;transcript_id=HG002_chrY_T0001807;gene_id=HG002_chrY_G0000604;Parent=HG002_chrY_T0001807;transcript_name=HG002_chrY_T0001807;gene_name=TTTY6B;ID=intron:HG002_chrY_T0001807:3;Name=TTTY6B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22980225	22980338	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253838.4;transcript_id=HG002_chrY_T0001807;gene_id=HG002_chrY_G0000604;Parent=HG002_chrY_T0001807;transcript_name=HG002_chrY_T0001807;gene_name=TTTY6B;ID=exon:HG002_chrY_T0001807:4;Name=TTTY6B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22980339	22980556	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253838.4;transcript_id=HG002_chrY_T0001807;gene_id=HG002_chrY_G0000604;Parent=HG002_chrY_T0001807;transcript_name=HG002_chrY_T0001807;gene_name=TTTY6B;ID=intron:HG002_chrY_T0001807:4;Name=TTTY6B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22980557	22980694	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253838.4;transcript_id=HG002_chrY_T0001807;gene_id=HG002_chrY_G0000604;Parent=HG002_chrY_T0001807;transcript_name=HG002_chrY_T0001807;gene_name=TTTY6B;ID=exon:HG002_chrY_T0001807:5;Name=TTTY6B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22980695	22981851	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253838.4;transcript_id=HG002_chrY_T0001807;gene_id=HG002_chrY_G0000604;Parent=HG002_chrY_T0001807;transcript_name=HG002_chrY_T0001807;gene_name=TTTY6B;ID=intron:HG002_chrY_T0001807:5;Name=TTTY6B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22981852	22982090	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253838.4;transcript_id=HG002_chrY_T0001807;gene_id=HG002_chrY_G0000604;Parent=HG002_chrY_T0001807;transcript_name=HG002_chrY_T0001807;gene_name=TTTY6B;ID=exon:HG002_chrY_T0001807:6;Name=TTTY6B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	22976523	22982090	1000	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG002_chrY_T0001809;gene_id=HG002_chrY_G0000604;Parent=HG002_chrY_G0000604;transcript_name=HG002_chrY_T0001809;gene_name=TTTY6B;ID=HG002_chrY_T0001809;Name=TTTY6B
HG002_chrY	CAT	exon	22976523	22976652	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG002_chrY_T0001809;gene_id=HG002_chrY_G0000604;Parent=HG002_chrY_T0001809;transcript_name=HG002_chrY_T0001809;gene_name=TTTY6B;ID=exon:HG002_chrY_T0001809:0;Name=TTTY6B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22976653	22976896	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG002_chrY_T0001809;gene_id=HG002_chrY_G0000604;Parent=HG002_chrY_T0001809;transcript_name=HG002_chrY_T0001809;gene_name=TTTY6B;ID=intron:HG002_chrY_T0001809:0;Name=TTTY6B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22976897	22977057	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG002_chrY_T0001809;gene_id=HG002_chrY_G0000604;Parent=HG002_chrY_T0001809;transcript_name=HG002_chrY_T0001809;gene_name=TTTY6B;ID=exon:HG002_chrY_T0001809:1;Name=TTTY6B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22977058	22980224	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG002_chrY_T0001809;gene_id=HG002_chrY_G0000604;Parent=HG002_chrY_T0001809;transcript_name=HG002_chrY_T0001809;gene_name=TTTY6B;ID=intron:HG002_chrY_T0001809:1;Name=TTTY6B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22980225	22980338	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG002_chrY_T0001809;gene_id=HG002_chrY_G0000604;Parent=HG002_chrY_T0001809;transcript_name=HG002_chrY_T0001809;gene_name=TTTY6B;ID=exon:HG002_chrY_T0001809:2;Name=TTTY6B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22980339	22980556	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG002_chrY_T0001809;gene_id=HG002_chrY_G0000604;Parent=HG002_chrY_T0001809;transcript_name=HG002_chrY_T0001809;gene_name=TTTY6B;ID=intron:HG002_chrY_T0001809:2;Name=TTTY6B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22980557	22980694	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG002_chrY_T0001809;gene_id=HG002_chrY_G0000604;Parent=HG002_chrY_T0001809;transcript_name=HG002_chrY_T0001809;gene_name=TTTY6B;ID=exon:HG002_chrY_T0001809:3;Name=TTTY6B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22980695	22980812	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG002_chrY_T0001809;gene_id=HG002_chrY_G0000604;Parent=HG002_chrY_T0001809;transcript_name=HG002_chrY_T0001809;gene_name=TTTY6B;ID=intron:HG002_chrY_T0001809:3;Name=TTTY6B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22980813	22980903	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG002_chrY_T0001809;gene_id=HG002_chrY_G0000604;Parent=HG002_chrY_T0001809;transcript_name=HG002_chrY_T0001809;gene_name=TTTY6B;ID=exon:HG002_chrY_T0001809:4;Name=TTTY6B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22980904	22981851	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG002_chrY_T0001809;gene_id=HG002_chrY_G0000604;Parent=HG002_chrY_T0001809;transcript_name=HG002_chrY_T0001809;gene_name=TTTY6B;ID=intron:HG002_chrY_T0001809:4;Name=TTTY6B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22981852	22982090	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG002_chrY_T0001809;gene_id=HG002_chrY_G0000604;Parent=HG002_chrY_T0001809;transcript_name=HG002_chrY_T0001809;gene_name=TTTY6B;ID=exon:HG002_chrY_T0001809:5;Name=TTTY6B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	22977962	22982088	1000	+	.	source_transcript=ENST00000774328.1;source_transcript_name=TTTY6B-203;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774328.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774328.1;transcript_id=HG002_chrY_T0001810;gene_id=HG002_chrY_G0000604;Parent=HG002_chrY_G0000604;transcript_name=HG002_chrY_T0001810;gene_name=TTTY6B;ID=HG002_chrY_T0001810;Name=TTTY6B
HG002_chrY	CAT	exon	22977962	22978227	.	+	.	source_transcript=ENST00000774328.1;source_transcript_name=TTTY6B-203;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774328.1;transcript_id=HG002_chrY_T0001810;gene_id=HG002_chrY_G0000604;Parent=HG002_chrY_T0001810;transcript_name=HG002_chrY_T0001810;gene_name=TTTY6B;ID=exon:HG002_chrY_T0001810:0;Name=TTTY6B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	22978228	22981851	.	+	.	source_transcript=ENST00000774328.1;source_transcript_name=TTTY6B-203;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774328.1;transcript_id=HG002_chrY_T0001810;gene_id=HG002_chrY_G0000604;Parent=HG002_chrY_T0001810;transcript_name=HG002_chrY_T0001810;gene_name=TTTY6B;ID=intron:HG002_chrY_T0001810:0;Name=TTTY6B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	22981852	22982088	.	+	.	source_transcript=ENST00000774328.1;source_transcript_name=TTTY6B-203;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774328.1;transcript_id=HG002_chrY_T0001810;gene_id=HG002_chrY_G0000604;Parent=HG002_chrY_T0001810;transcript_name=HG002_chrY_T0001810;gene_name=TTTY6B;ID=exon:HG002_chrY_T0001810:1;Name=TTTY6B;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23003804	23018250	.	-	.	source_gene_common_name=RBMY1F;source_gene=ENSG00000169800.14;alternative_source_transcripts=ENST00000303766.12;gene_id=HG002_chrY_G0000605;gene_biotype=protein_coding;gene_name=RBMY1F;gene_sources=liftoff;ID=HG002_chrY_G0000605;Name=RBMY1F
HG002_chrY	CAT	transcript	23003804	23018191	100	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_G0000605;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=HG002_chrY_T0001811;Name=RBMY1F
HG002_chrY	CAT	exon	23003804	23004380	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001811:0;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23004082	23004380	.	-	2	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=CDS:HG002_chrY_T0001811:0;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	23004082	23004084	.	-	0	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=stop_codon:HG002_chrY_T0001811;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23004381	23004791	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=intron:HG002_chrY_T0001811:0;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23004792	23004880	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001811:1;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23004792	23004880	.	-	1	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=CDS:HG002_chrY_T0001811:1;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23004881	23004966	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=intron:HG002_chrY_T0001811:1;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23004967	23005077	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001811:2;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23004967	23005077	.	-	1	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=CDS:HG002_chrY_T0001811:2;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23005078	23006000	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=intron:HG002_chrY_T0001811:2;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23006001	23006111	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001811:3;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23006001	23006111	.	-	1	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=CDS:HG002_chrY_T0001811:3;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23006112	23006545	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=intron:HG002_chrY_T0001811:3;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23006546	23006656	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001811:4;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23006546	23006656	.	-	1	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=CDS:HG002_chrY_T0001811:4;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23006657	23007096	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=intron:HG002_chrY_T0001811:4;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23007097	23007207	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001811:5;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23007097	23007207	.	-	1	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=CDS:HG002_chrY_T0001811:5;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23007208	23008162	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=intron:HG002_chrY_T0001811:5;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23008163	23008277	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001811:6;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23008163	23008277	.	-	2	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=CDS:HG002_chrY_T0001811:6;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23008278	23010287	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=intron:HG002_chrY_T0001811:6;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23010288	23010440	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001811:7;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23010288	23010440	.	-	2	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=CDS:HG002_chrY_T0001811:7;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23010441	23012355	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=intron:HG002_chrY_T0001811:7;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23012356	23012533	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001811:8;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23012356	23012533	.	-	0	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=CDS:HG002_chrY_T0001811:8;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23012534	23015556	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=intron:HG002_chrY_T0001811:8;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23015557	23015660	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001811:9;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23015557	23015660	.	-	2	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=CDS:HG002_chrY_T0001811:9;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23015661	23016128	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=intron:HG002_chrY_T0001811:9;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23016129	23016241	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001811:10;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23016129	23016237	.	-	0	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=CDS:HG002_chrY_T0001811:10;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	23016235	23016237	.	-	0	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=start_codon:HG002_chrY_T0001811;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23016242	23018102	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=intron:HG002_chrY_T0001811:10;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23018103	23018191	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG002_chrY_T0001811;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001811;transcript_name=HG002_chrY_T0001811;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001811:11;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	23003804	23018250	100	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_G0000605;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=HG002_chrY_T0001812;Name=RBMY1F
HG002_chrY	CAT	exon	23003804	23004380	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001812:0;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23004082	23004380	.	-	2	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=CDS:HG002_chrY_T0001812:0;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	23004082	23004084	.	-	0	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=stop_codon:HG002_chrY_T0001812;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23004381	23004791	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=intron:HG002_chrY_T0001812:0;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23004792	23004880	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001812:1;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23004792	23004880	.	-	1	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=CDS:HG002_chrY_T0001812:1;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23004881	23006000	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=intron:HG002_chrY_T0001812:1;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23006001	23006111	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001812:2;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23006001	23006111	.	-	1	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=CDS:HG002_chrY_T0001812:2;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23006112	23006545	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=intron:HG002_chrY_T0001812:2;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23006546	23006656	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001812:3;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23006546	23006656	.	-	1	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=CDS:HG002_chrY_T0001812:3;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23006657	23007096	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=intron:HG002_chrY_T0001812:3;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23007097	23007207	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001812:4;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23007097	23007207	.	-	1	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=CDS:HG002_chrY_T0001812:4;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23007208	23008162	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=intron:HG002_chrY_T0001812:4;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23008163	23008277	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001812:5;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23008163	23008277	.	-	2	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=CDS:HG002_chrY_T0001812:5;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23008278	23010287	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=intron:HG002_chrY_T0001812:5;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23010288	23010440	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001812:6;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23010288	23010440	.	-	2	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=CDS:HG002_chrY_T0001812:6;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23010441	23012355	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=intron:HG002_chrY_T0001812:6;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23012356	23012533	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001812:7;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23012356	23012533	.	-	0	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=CDS:HG002_chrY_T0001812:7;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23012534	23015556	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=intron:HG002_chrY_T0001812:7;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23015557	23015660	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001812:8;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23015557	23015660	.	-	2	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=CDS:HG002_chrY_T0001812:8;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23015661	23016128	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=intron:HG002_chrY_T0001812:8;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23016129	23016241	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001812:9;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23016129	23016237	.	-	0	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=CDS:HG002_chrY_T0001812:9;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	23016235	23016237	.	-	0	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=start_codon:HG002_chrY_T0001812;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23016242	23018102	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=intron:HG002_chrY_T0001812:9;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23018103	23018250	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG002_chrY_T0001812;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001812;transcript_name=HG002_chrY_T0001812;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001812:10;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	23003804	23018225	1000	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG002_chrY_T0001813;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_G0000605;transcript_name=HG002_chrY_T0001813;gene_name=RBMY1F;ID=HG002_chrY_T0001813;Name=RBMY1F
HG002_chrY	CAT	exon	23003804	23004380	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG002_chrY_T0001813;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001813;transcript_name=HG002_chrY_T0001813;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001813:0;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23004381	23004791	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG002_chrY_T0001813;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001813;transcript_name=HG002_chrY_T0001813;gene_name=RBMY1F;ID=intron:HG002_chrY_T0001813:0;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23004792	23004880	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG002_chrY_T0001813;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001813;transcript_name=HG002_chrY_T0001813;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001813:1;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23004881	23004966	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG002_chrY_T0001813;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001813;transcript_name=HG002_chrY_T0001813;gene_name=RBMY1F;ID=intron:HG002_chrY_T0001813:1;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23004967	23005077	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG002_chrY_T0001813;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001813;transcript_name=HG002_chrY_T0001813;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001813:2;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23005078	23006000	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG002_chrY_T0001813;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001813;transcript_name=HG002_chrY_T0001813;gene_name=RBMY1F;ID=intron:HG002_chrY_T0001813:2;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23006001	23006111	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG002_chrY_T0001813;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001813;transcript_name=HG002_chrY_T0001813;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001813:3;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23006112	23006545	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG002_chrY_T0001813;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001813;transcript_name=HG002_chrY_T0001813;gene_name=RBMY1F;ID=intron:HG002_chrY_T0001813:3;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23006546	23006656	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG002_chrY_T0001813;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001813;transcript_name=HG002_chrY_T0001813;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001813:4;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23006657	23007096	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG002_chrY_T0001813;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001813;transcript_name=HG002_chrY_T0001813;gene_name=RBMY1F;ID=intron:HG002_chrY_T0001813:4;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23007097	23007207	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG002_chrY_T0001813;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001813;transcript_name=HG002_chrY_T0001813;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001813:5;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23007208	23008162	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG002_chrY_T0001813;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001813;transcript_name=HG002_chrY_T0001813;gene_name=RBMY1F;ID=intron:HG002_chrY_T0001813:5;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23008163	23008277	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG002_chrY_T0001813;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001813;transcript_name=HG002_chrY_T0001813;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001813:6;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23008278	23010287	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG002_chrY_T0001813;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001813;transcript_name=HG002_chrY_T0001813;gene_name=RBMY1F;ID=intron:HG002_chrY_T0001813:6;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23010288	23010440	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG002_chrY_T0001813;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001813;transcript_name=HG002_chrY_T0001813;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001813:7;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23010441	23015556	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG002_chrY_T0001813;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001813;transcript_name=HG002_chrY_T0001813;gene_name=RBMY1F;ID=intron:HG002_chrY_T0001813:7;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23015557	23015660	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG002_chrY_T0001813;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001813;transcript_name=HG002_chrY_T0001813;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001813:8;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23015661	23016128	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG002_chrY_T0001813;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001813;transcript_name=HG002_chrY_T0001813;gene_name=RBMY1F;ID=intron:HG002_chrY_T0001813:8;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23016129	23016241	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG002_chrY_T0001813;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001813;transcript_name=HG002_chrY_T0001813;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001813:9;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23016242	23018102	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG002_chrY_T0001813;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001813;transcript_name=HG002_chrY_T0001813;gene_name=RBMY1F;ID=intron:HG002_chrY_T0001813:9;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23018103	23018225	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG002_chrY_T0001813;gene_id=HG002_chrY_G0000605;Parent=HG002_chrY_T0001813;transcript_name=HG002_chrY_T0001813;gene_name=RBMY1F;ID=exon:HG002_chrY_T0001813:10;Name=RBMY1F;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23019118	23021283	.	+	.	source_gene_common_name=TSPY21P;source_gene=ENSG00000237902.1;gene_id=HG002_chrY_G0000606;gene_biotype=unprocessed_pseudogene;gene_name=TSPY21P;gene_sources=liftoff;ID=HG002_chrY_G0000606;Name=TSPY21P
HG002_chrY	CAT	transcript	23019118	23021283	1000	+	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;transcript_id=HG002_chrY_T0001814;gene_id=HG002_chrY_G0000606;Parent=HG002_chrY_G0000606;transcript_name=HG002_chrY_T0001814;gene_name=TSPY21P;ID=HG002_chrY_T0001814;Name=TSPY21P
HG002_chrY	CAT	exon	23019118	23019511	.	+	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;transcript_id=HG002_chrY_T0001814;gene_id=HG002_chrY_G0000606;Parent=HG002_chrY_T0001814;transcript_name=HG002_chrY_T0001814;gene_name=TSPY21P;ID=exon:HG002_chrY_T0001814:0;Name=TSPY21P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23019512	23020499	.	+	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;transcript_id=HG002_chrY_T0001814;gene_id=HG002_chrY_G0000606;Parent=HG002_chrY_T0001814;transcript_name=HG002_chrY_T0001814;gene_name=TSPY21P;ID=intron:HG002_chrY_T0001814:0;Name=TSPY21P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23020500	23020584	.	+	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;transcript_id=HG002_chrY_T0001814;gene_id=HG002_chrY_G0000606;Parent=HG002_chrY_T0001814;transcript_name=HG002_chrY_T0001814;gene_name=TSPY21P;ID=exon:HG002_chrY_T0001814:1;Name=TSPY21P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23020585	23020828	.	+	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;transcript_id=HG002_chrY_T0001814;gene_id=HG002_chrY_G0000606;Parent=HG002_chrY_T0001814;transcript_name=HG002_chrY_T0001814;gene_name=TSPY21P;ID=intron:HG002_chrY_T0001814:1;Name=TSPY21P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23020829	23020894	.	+	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;transcript_id=HG002_chrY_T0001814;gene_id=HG002_chrY_G0000606;Parent=HG002_chrY_T0001814;transcript_name=HG002_chrY_T0001814;gene_name=TSPY21P;ID=exon:HG002_chrY_T0001814:2;Name=TSPY21P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23020895	23020980	.	+	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;transcript_id=HG002_chrY_T0001814;gene_id=HG002_chrY_G0000606;Parent=HG002_chrY_T0001814;transcript_name=HG002_chrY_T0001814;gene_name=TSPY21P;ID=intron:HG002_chrY_T0001814:2;Name=TSPY21P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23020981	23021124	.	+	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;transcript_id=HG002_chrY_T0001814;gene_id=HG002_chrY_G0000606;Parent=HG002_chrY_T0001814;transcript_name=HG002_chrY_T0001814;gene_name=TSPY21P;ID=exon:HG002_chrY_T0001814:3;Name=TSPY21P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23021125	23021241	.	+	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;transcript_id=HG002_chrY_T0001814;gene_id=HG002_chrY_G0000606;Parent=HG002_chrY_T0001814;transcript_name=HG002_chrY_T0001814;gene_name=TSPY21P;ID=intron:HG002_chrY_T0001814:3;Name=TSPY21P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23021242	23021283	.	+	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;transcript_id=HG002_chrY_T0001814;gene_id=HG002_chrY_G0000606;Parent=HG002_chrY_T0001814;transcript_name=HG002_chrY_T0001814;gene_name=TSPY21P;ID=exon:HG002_chrY_T0001814:4;Name=TSPY21P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23033697	23038980	.	+	.	source_gene_common_name=RBMY2UP;source_gene=ENSG00000225615.1;alternative_source_transcripts=ENST00000453474.1;gene_id=HG002_chrY_G0000607;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2UP;gene_sources=liftoff;ID=HG002_chrY_G0000607;Name=RBMY2UP
HG002_chrY	CAT	transcript	23033697	23038980	1000	+	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG002_chrY_T0001815;gene_id=HG002_chrY_G0000607;Parent=HG002_chrY_G0000607;transcript_name=HG002_chrY_T0001815;gene_name=RBMY2UP;ID=HG002_chrY_T0001815;Name=RBMY2UP
HG002_chrY	CAT	exon	23033697	23033804	.	+	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG002_chrY_T0001815;gene_id=HG002_chrY_G0000607;Parent=HG002_chrY_T0001815;transcript_name=HG002_chrY_T0001815;gene_name=RBMY2UP;ID=exon:HG002_chrY_T0001815:0;Name=RBMY2UP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23033805	23034207	.	+	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG002_chrY_T0001815;gene_id=HG002_chrY_G0000607;Parent=HG002_chrY_T0001815;transcript_name=HG002_chrY_T0001815;gene_name=RBMY2UP;ID=intron:HG002_chrY_T0001815:0;Name=RBMY2UP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23034208	23034310	.	+	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG002_chrY_T0001815;gene_id=HG002_chrY_G0000607;Parent=HG002_chrY_T0001815;transcript_name=HG002_chrY_T0001815;gene_name=RBMY2UP;ID=exon:HG002_chrY_T0001815:1;Name=RBMY2UP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23034311	23038867	.	+	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG002_chrY_T0001815;gene_id=HG002_chrY_G0000607;Parent=HG002_chrY_T0001815;transcript_name=HG002_chrY_T0001815;gene_name=RBMY2UP;ID=intron:HG002_chrY_T0001815:1;Name=RBMY2UP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23038868	23038980	.	+	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG002_chrY_T0001815;gene_id=HG002_chrY_G0000607;Parent=HG002_chrY_T0001815;transcript_name=HG002_chrY_T0001815;gene_name=RBMY2UP;ID=exon:HG002_chrY_T0001815:2;Name=RBMY2UP;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23089179	23091227	.	-	.	source_gene_common_name=TTTY25P;source_gene=ENSG00000259247.1;alternative_source_transcripts=ENST00000558356.1;gene_id=HG002_chrY_G0000608;gene_biotype=unprocessed_pseudogene;gene_name=TTTY25P;gene_sources=liftoff;ID=HG002_chrY_G0000608;Name=TTTY25P
HG002_chrY	CAT	transcript	23089179	23091227	1000	-	.	source_transcript=ENST00000558356.1;source_transcript_name=TTTY25P-201;source_gene=ENSG00000259247.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259247.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000558356.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000558356.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY25P;alternative_source_transcripts=ENST00000558356.1;transcript_id=HG002_chrY_T0001816;gene_id=HG002_chrY_G0000608;Parent=HG002_chrY_G0000608;transcript_name=HG002_chrY_T0001816;gene_name=TTTY25P;ID=HG002_chrY_T0001816;Name=TTTY25P
HG002_chrY	CAT	exon	23089179	23090110	.	-	.	source_transcript=ENST00000558356.1;source_transcript_name=TTTY25P-201;source_gene=ENSG00000259247.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259247.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000558356.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000558356.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY25P;alternative_source_transcripts=ENST00000558356.1;transcript_id=HG002_chrY_T0001816;gene_id=HG002_chrY_G0000608;Parent=HG002_chrY_T0001816;transcript_name=HG002_chrY_T0001816;gene_name=TTTY25P;ID=exon:HG002_chrY_T0001816:0;Name=TTTY25P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23090111	23090654	.	-	.	source_transcript=ENST00000558356.1;source_transcript_name=TTTY25P-201;source_gene=ENSG00000259247.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259247.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000558356.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000558356.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY25P;alternative_source_transcripts=ENST00000558356.1;transcript_id=HG002_chrY_T0001816;gene_id=HG002_chrY_G0000608;Parent=HG002_chrY_T0001816;transcript_name=HG002_chrY_T0001816;gene_name=TTTY25P;ID=intron:HG002_chrY_T0001816:0;Name=TTTY25P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23090655	23091227	.	-	.	source_transcript=ENST00000558356.1;source_transcript_name=TTTY25P-201;source_gene=ENSG00000259247.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259247.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000558356.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000558356.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY25P;alternative_source_transcripts=ENST00000558356.1;transcript_id=HG002_chrY_T0001816;gene_id=HG002_chrY_G0000608;Parent=HG002_chrY_T0001816;transcript_name=HG002_chrY_T0001816;gene_name=TTTY25P;ID=exon:HG002_chrY_T0001816:1;Name=TTTY25P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23099855	23110816	.	-	.	source_gene_common_name=RBMY2FP;source_gene=ENSG00000243040.7;gene_id=HG002_chrY_G0000609;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2FP;gene_sources=liftoff;ID=HG002_chrY_G0000609;Name=RBMY2FP
HG002_chrY	CAT	transcript	23099855	23110816	1000	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG002_chrY_T0001817;gene_id=HG002_chrY_G0000609;Parent=HG002_chrY_G0000609;transcript_name=HG002_chrY_T0001817;gene_name=RBMY2FP;ID=HG002_chrY_T0001817;Name=RBMY2FP
HG002_chrY	CAT	exon	23099855	23100156	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG002_chrY_T0001817;gene_id=HG002_chrY_G0000609;Parent=HG002_chrY_T0001817;transcript_name=HG002_chrY_T0001817;gene_name=RBMY2FP;ID=exon:HG002_chrY_T0001817:0;Name=RBMY2FP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23100157	23100570	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG002_chrY_T0001817;gene_id=HG002_chrY_G0000609;Parent=HG002_chrY_T0001817;transcript_name=HG002_chrY_T0001817;gene_name=RBMY2FP;ID=intron:HG002_chrY_T0001817:0;Name=RBMY2FP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23100571	23100659	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG002_chrY_T0001817;gene_id=HG002_chrY_G0000609;Parent=HG002_chrY_T0001817;transcript_name=HG002_chrY_T0001817;gene_name=RBMY2FP;ID=exon:HG002_chrY_T0001817:1;Name=RBMY2FP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23100660	23100739	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG002_chrY_T0001817;gene_id=HG002_chrY_G0000609;Parent=HG002_chrY_T0001817;transcript_name=HG002_chrY_T0001817;gene_name=RBMY2FP;ID=intron:HG002_chrY_T0001817:1;Name=RBMY2FP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23100740	23100850	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG002_chrY_T0001817;gene_id=HG002_chrY_G0000609;Parent=HG002_chrY_T0001817;transcript_name=HG002_chrY_T0001817;gene_name=RBMY2FP;ID=exon:HG002_chrY_T0001817:2;Name=RBMY2FP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23100851	23101215	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG002_chrY_T0001817;gene_id=HG002_chrY_G0000609;Parent=HG002_chrY_T0001817;transcript_name=HG002_chrY_T0001817;gene_name=RBMY2FP;ID=intron:HG002_chrY_T0001817:2;Name=RBMY2FP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23101216	23101317	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG002_chrY_T0001817;gene_id=HG002_chrY_G0000609;Parent=HG002_chrY_T0001817;transcript_name=HG002_chrY_T0001817;gene_name=RBMY2FP;ID=exon:HG002_chrY_T0001817:3;Name=RBMY2FP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23101318	23102782	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG002_chrY_T0001817;gene_id=HG002_chrY_G0000609;Parent=HG002_chrY_T0001817;transcript_name=HG002_chrY_T0001817;gene_name=RBMY2FP;ID=intron:HG002_chrY_T0001817:3;Name=RBMY2FP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23102783	23102897	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG002_chrY_T0001817;gene_id=HG002_chrY_G0000609;Parent=HG002_chrY_T0001817;transcript_name=HG002_chrY_T0001817;gene_name=RBMY2FP;ID=exon:HG002_chrY_T0001817:4;Name=RBMY2FP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23102898	23104932	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG002_chrY_T0001817;gene_id=HG002_chrY_G0000609;Parent=HG002_chrY_T0001817;transcript_name=HG002_chrY_T0001817;gene_name=RBMY2FP;ID=intron:HG002_chrY_T0001817:4;Name=RBMY2FP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23104933	23105085	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG002_chrY_T0001817;gene_id=HG002_chrY_G0000609;Parent=HG002_chrY_T0001817;transcript_name=HG002_chrY_T0001817;gene_name=RBMY2FP;ID=exon:HG002_chrY_T0001817:5;Name=RBMY2FP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23105086	23107009	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG002_chrY_T0001817;gene_id=HG002_chrY_G0000609;Parent=HG002_chrY_T0001817;transcript_name=HG002_chrY_T0001817;gene_name=RBMY2FP;ID=intron:HG002_chrY_T0001817:5;Name=RBMY2FP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23107010	23107187	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG002_chrY_T0001817;gene_id=HG002_chrY_G0000609;Parent=HG002_chrY_T0001817;transcript_name=HG002_chrY_T0001817;gene_name=RBMY2FP;ID=exon:HG002_chrY_T0001817:6;Name=RBMY2FP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23107188	23110181	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG002_chrY_T0001817;gene_id=HG002_chrY_G0000609;Parent=HG002_chrY_T0001817;transcript_name=HG002_chrY_T0001817;gene_name=RBMY2FP;ID=intron:HG002_chrY_T0001817:6;Name=RBMY2FP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23110182	23110285	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG002_chrY_T0001817;gene_id=HG002_chrY_G0000609;Parent=HG002_chrY_T0001817;transcript_name=HG002_chrY_T0001817;gene_name=RBMY2FP;ID=exon:HG002_chrY_T0001817:7;Name=RBMY2FP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23110286	23110707	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG002_chrY_T0001817;gene_id=HG002_chrY_G0000609;Parent=HG002_chrY_T0001817;transcript_name=HG002_chrY_T0001817;gene_name=RBMY2FP;ID=intron:HG002_chrY_T0001817:7;Name=RBMY2FP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23110708	23110816	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG002_chrY_T0001817;gene_id=HG002_chrY_G0000609;Parent=HG002_chrY_T0001817;transcript_name=HG002_chrY_T0001817;gene_name=RBMY2FP;ID=exon:HG002_chrY_T0001817:8;Name=RBMY2FP;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23105475	23112851	.	-	.	source_gene_common_name=RBMY2FP;source_gene=ENSG00000290336.2;gene_id=HG002_chrY_G0000610;gene_biotype=lncRNA;gene_name=RBMY2FP;gene_sources=liftoff;ID=HG002_chrY_G0000610;Name=RBMY2FP
HG002_chrY	CAT	transcript	23105475	23112851	1000	-	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG002_chrY_T0001818;gene_id=HG002_chrY_G0000610;Parent=HG002_chrY_G0000610;transcript_name=HG002_chrY_T0001818;gene_name=RBMY2FP;ID=HG002_chrY_T0001818;Name=RBMY2FP
HG002_chrY	CAT	exon	23105475	23107187	.	-	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG002_chrY_T0001818;gene_id=HG002_chrY_G0000610;Parent=HG002_chrY_T0001818;transcript_name=HG002_chrY_T0001818;gene_name=RBMY2FP;ID=exon:HG002_chrY_T0001818:0;Name=RBMY2FP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23107188	23110181	.	-	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG002_chrY_T0001818;gene_id=HG002_chrY_G0000610;Parent=HG002_chrY_T0001818;transcript_name=HG002_chrY_T0001818;gene_name=RBMY2FP;ID=intron:HG002_chrY_T0001818:0;Name=RBMY2FP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23110182	23110285	.	-	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG002_chrY_T0001818;gene_id=HG002_chrY_G0000610;Parent=HG002_chrY_T0001818;transcript_name=HG002_chrY_T0001818;gene_name=RBMY2FP;ID=exon:HG002_chrY_T0001818:1;Name=RBMY2FP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23110286	23110707	.	-	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG002_chrY_T0001818;gene_id=HG002_chrY_G0000610;Parent=HG002_chrY_T0001818;transcript_name=HG002_chrY_T0001818;gene_name=RBMY2FP;ID=intron:HG002_chrY_T0001818:1;Name=RBMY2FP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23110708	23110820	.	-	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG002_chrY_T0001818;gene_id=HG002_chrY_G0000610;Parent=HG002_chrY_T0001818;transcript_name=HG002_chrY_T0001818;gene_name=RBMY2FP;ID=exon:HG002_chrY_T0001818:2;Name=RBMY2FP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23110821	23112709	.	-	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG002_chrY_T0001818;gene_id=HG002_chrY_G0000610;Parent=HG002_chrY_T0001818;transcript_name=HG002_chrY_T0001818;gene_name=RBMY2FP;ID=intron:HG002_chrY_T0001818:2;Name=RBMY2FP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23112710	23112851	.	-	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG002_chrY_T0001818;gene_id=HG002_chrY_G0000610;Parent=HG002_chrY_T0001818;transcript_name=HG002_chrY_T0001818;gene_name=RBMY2FP;ID=exon:HG002_chrY_T0001818:3;Name=RBMY2FP;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	23110569	23112796	1000	-	.	source_transcript=ENST00000724365.1;source_transcript_name=RBMY2FP-203;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724365.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG002_chrY_T0001819;gene_id=HG002_chrY_G0000610;Parent=HG002_chrY_G0000610;transcript_name=HG002_chrY_T0001819;gene_name=RBMY2FP;ID=HG002_chrY_T0001819;Name=RBMY2FP
HG002_chrY	CAT	exon	23110569	23110820	.	-	.	source_transcript=ENST00000724365.1;source_transcript_name=RBMY2FP-203;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG002_chrY_T0001819;gene_id=HG002_chrY_G0000610;Parent=HG002_chrY_T0001819;transcript_name=HG002_chrY_T0001819;gene_name=RBMY2FP;ID=exon:HG002_chrY_T0001819:0;Name=RBMY2FP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23110821	23111969	.	-	.	source_transcript=ENST00000724365.1;source_transcript_name=RBMY2FP-203;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG002_chrY_T0001819;gene_id=HG002_chrY_G0000610;Parent=HG002_chrY_T0001819;transcript_name=HG002_chrY_T0001819;gene_name=RBMY2FP;ID=intron:HG002_chrY_T0001819:0;Name=RBMY2FP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23111970	23112056	.	-	.	source_transcript=ENST00000724365.1;source_transcript_name=RBMY2FP-203;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG002_chrY_T0001819;gene_id=HG002_chrY_G0000610;Parent=HG002_chrY_T0001819;transcript_name=HG002_chrY_T0001819;gene_name=RBMY2FP;ID=exon:HG002_chrY_T0001819:1;Name=RBMY2FP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23112057	23112709	.	-	.	source_transcript=ENST00000724365.1;source_transcript_name=RBMY2FP-203;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG002_chrY_T0001819;gene_id=HG002_chrY_G0000610;Parent=HG002_chrY_T0001819;transcript_name=HG002_chrY_T0001819;gene_name=RBMY2FP;ID=intron:HG002_chrY_T0001819:1;Name=RBMY2FP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23112710	23112796	.	-	.	source_transcript=ENST00000724365.1;source_transcript_name=RBMY2FP-203;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG002_chrY_T0001819;gene_id=HG002_chrY_G0000610;Parent=HG002_chrY_T0001819;transcript_name=HG002_chrY_T0001819;gene_name=RBMY2FP;ID=exon:HG002_chrY_T0001819:2;Name=RBMY2FP;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23113729	23115755	.	+	.	source_gene_common_name=TSPY22P;source_gene=ENSG00000229940.1;alternative_source_transcripts=ENST00000427496.1;gene_id=HG002_chrY_G0000611;gene_biotype=unprocessed_pseudogene;gene_name=TSPY22P;gene_sources=liftoff;ID=HG002_chrY_G0000611;Name=TSPY22P
HG002_chrY	CAT	transcript	23113729	23115755	1000	+	.	source_transcript=ENST00000427496.1;source_transcript_name=TSPY22P-201;source_gene=ENSG00000229940.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229940.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427496.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY22P;alternative_source_transcripts=ENST00000427496.1;transcript_id=HG002_chrY_T0001820;gene_id=HG002_chrY_G0000611;Parent=HG002_chrY_G0000611;transcript_name=HG002_chrY_T0001820;gene_name=TSPY22P;ID=HG002_chrY_T0001820;Name=TSPY22P
HG002_chrY	CAT	exon	23113729	23114120	.	+	.	source_transcript=ENST00000427496.1;source_transcript_name=TSPY22P-201;source_gene=ENSG00000229940.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229940.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427496.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY22P;alternative_source_transcripts=ENST00000427496.1;transcript_id=HG002_chrY_T0001820;gene_id=HG002_chrY_G0000611;Parent=HG002_chrY_T0001820;transcript_name=HG002_chrY_T0001820;gene_name=TSPY22P;ID=exon:HG002_chrY_T0001820:0;Name=TSPY22P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23114121	23115459	.	+	.	source_transcript=ENST00000427496.1;source_transcript_name=TSPY22P-201;source_gene=ENSG00000229940.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229940.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427496.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY22P;alternative_source_transcripts=ENST00000427496.1;transcript_id=HG002_chrY_T0001820;gene_id=HG002_chrY_G0000611;Parent=HG002_chrY_T0001820;transcript_name=HG002_chrY_T0001820;gene_name=TSPY22P;ID=intron:HG002_chrY_T0001820:0;Name=TSPY22P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23115460	23115525	.	+	.	source_transcript=ENST00000427496.1;source_transcript_name=TSPY22P-201;source_gene=ENSG00000229940.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229940.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427496.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY22P;alternative_source_transcripts=ENST00000427496.1;transcript_id=HG002_chrY_T0001820;gene_id=HG002_chrY_G0000611;Parent=HG002_chrY_T0001820;transcript_name=HG002_chrY_T0001820;gene_name=TSPY22P;ID=exon:HG002_chrY_T0001820:1;Name=TSPY22P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23115526	23115609	.	+	.	source_transcript=ENST00000427496.1;source_transcript_name=TSPY22P-201;source_gene=ENSG00000229940.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229940.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427496.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY22P;alternative_source_transcripts=ENST00000427496.1;transcript_id=HG002_chrY_T0001820;gene_id=HG002_chrY_G0000611;Parent=HG002_chrY_T0001820;transcript_name=HG002_chrY_T0001820;gene_name=TSPY22P;ID=intron:HG002_chrY_T0001820:1;Name=TSPY22P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23115610	23115755	.	+	.	source_transcript=ENST00000427496.1;source_transcript_name=TSPY22P-201;source_gene=ENSG00000229940.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229940.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427496.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY22P;alternative_source_transcripts=ENST00000427496.1;transcript_id=HG002_chrY_T0001820;gene_id=HG002_chrY_G0000611;Parent=HG002_chrY_T0001820;transcript_name=HG002_chrY_T0001820;gene_name=TSPY22P;ID=exon:HG002_chrY_T0001820:2;Name=TSPY22P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23122810	23124888	.	+	.	source_gene_common_name=TTTY5;source_gene=ENSG00000215560.2;alternative_source_transcripts=ENST00000400581.2;gene_id=HG002_chrY_G0000612;gene_biotype=lncRNA;gene_name=TTTY5;gene_sources=liftoff;ID=HG002_chrY_G0000612;Name=TTTY5
HG002_chrY	CAT	transcript	23122810	23124888	1000	+	.	source_transcript=ENST00000400581.2;source_transcript_name=TTTY5-201;source_gene=ENSG00000215560.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000215560.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400581.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000400581.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=ENST00000400581.2;transcript_id=HG002_chrY_T0001821;gene_id=HG002_chrY_G0000612;Parent=HG002_chrY_G0000612;transcript_name=HG002_chrY_T0001821;gene_name=TTTY5;ID=HG002_chrY_T0001821;Name=TTTY5
HG002_chrY	CAT	exon	23122810	23123380	.	+	.	source_transcript=ENST00000400581.2;source_transcript_name=TTTY5-201;source_gene=ENSG00000215560.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000215560.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400581.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000400581.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=ENST00000400581.2;transcript_id=HG002_chrY_T0001821;gene_id=HG002_chrY_G0000612;Parent=HG002_chrY_T0001821;transcript_name=HG002_chrY_T0001821;gene_name=TTTY5;ID=exon:HG002_chrY_T0001821:0;Name=TTTY5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23123381	23123897	.	+	.	source_transcript=ENST00000400581.2;source_transcript_name=TTTY5-201;source_gene=ENSG00000215560.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000215560.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400581.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000400581.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=ENST00000400581.2;transcript_id=HG002_chrY_T0001821;gene_id=HG002_chrY_G0000612;Parent=HG002_chrY_T0001821;transcript_name=HG002_chrY_T0001821;gene_name=TTTY5;ID=intron:HG002_chrY_T0001821:0;Name=TTTY5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23123898	23124888	.	+	.	source_transcript=ENST00000400581.2;source_transcript_name=TTTY5-201;source_gene=ENSG00000215560.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000215560.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400581.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000400581.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=ENST00000400581.2;transcript_id=HG002_chrY_T0001821;gene_id=HG002_chrY_G0000612;Parent=HG002_chrY_T0001821;transcript_name=HG002_chrY_T0001821;gene_name=TTTY5;ID=exon:HG002_chrY_T0001821:1;Name=TTTY5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23205211	23212460	.	-	.	source_gene_common_name=RBMY1KP;source_gene=ENSG00000229234.1;alternative_source_transcripts=ENST00000423480.1;gene_id=HG002_chrY_G0000613;gene_biotype=unprocessed_pseudogene;gene_name=RBMY1KP;gene_sources=liftoff;ID=HG002_chrY_G0000613;Name=RBMY1KP
HG002_chrY	CAT	transcript	23205211	23212460	1000	-	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1;transcript_id=HG002_chrY_T0001822;gene_id=HG002_chrY_G0000613;Parent=HG002_chrY_G0000613;transcript_name=HG002_chrY_T0001822;gene_name=RBMY1KP;ID=HG002_chrY_T0001822;Name=RBMY1KP
HG002_chrY	CAT	exon	23205211	23205325	.	-	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1;transcript_id=HG002_chrY_T0001822;gene_id=HG002_chrY_G0000613;Parent=HG002_chrY_T0001822;transcript_name=HG002_chrY_T0001822;gene_name=RBMY1KP;ID=exon:HG002_chrY_T0001822:0;Name=RBMY1KP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23205326	23209189	.	-	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1;transcript_id=HG002_chrY_T0001822;gene_id=HG002_chrY_G0000613;Parent=HG002_chrY_T0001822;transcript_name=HG002_chrY_T0001822;gene_name=RBMY1KP;ID=intron:HG002_chrY_T0001822:0;Name=RBMY1KP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23209190	23209366	.	-	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1;transcript_id=HG002_chrY_T0001822;gene_id=HG002_chrY_G0000613;Parent=HG002_chrY_T0001822;transcript_name=HG002_chrY_T0001822;gene_name=RBMY1KP;ID=exon:HG002_chrY_T0001822:1;Name=RBMY1KP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23209367	23211763	.	-	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1;transcript_id=HG002_chrY_T0001822;gene_id=HG002_chrY_G0000613;Parent=HG002_chrY_T0001822;transcript_name=HG002_chrY_T0001822;gene_name=RBMY1KP;ID=intron:HG002_chrY_T0001822:1;Name=RBMY1KP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23211764	23211834	.	-	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1;transcript_id=HG002_chrY_T0001822;gene_id=HG002_chrY_G0000613;Parent=HG002_chrY_T0001822;transcript_name=HG002_chrY_T0001822;gene_name=RBMY1KP;ID=exon:HG002_chrY_T0001822:2;Name=RBMY1KP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23211835	23212347	.	-	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1;transcript_id=HG002_chrY_T0001822;gene_id=HG002_chrY_G0000613;Parent=HG002_chrY_T0001822;transcript_name=HG002_chrY_T0001822;gene_name=RBMY1KP;ID=intron:HG002_chrY_T0001822:2;Name=RBMY1KP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23212348	23212460	.	-	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1;transcript_id=HG002_chrY_T0001822;gene_id=HG002_chrY_G0000613;Parent=HG002_chrY_T0001822;transcript_name=HG002_chrY_T0001822;gene_name=RBMY1KP;ID=exon:HG002_chrY_T0001822:3;Name=RBMY1KP;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23218079	23223362	.	-	.	source_gene_common_name=RBMY2UP;source_gene=ENSG00000225615.1;alternative_source_transcripts=ENST00000453474.1;gene_id=HG002_chrY_G0000614;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2UP;gene_sources=liftoff;ID=HG002_chrY_G0000614;Name=RBMY2UP
HG002_chrY	CAT	transcript	23218079	23223362	1000	-	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG002_chrY_T0001823;gene_id=HG002_chrY_G0000614;Parent=HG002_chrY_G0000614;transcript_name=HG002_chrY_T0001823;gene_name=RBMY2UP;ID=HG002_chrY_T0001823;Name=RBMY2UP
HG002_chrY	CAT	exon	23218079	23218191	.	-	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG002_chrY_T0001823;gene_id=HG002_chrY_G0000614;Parent=HG002_chrY_T0001823;transcript_name=HG002_chrY_T0001823;gene_name=RBMY2UP;ID=exon:HG002_chrY_T0001823:0;Name=RBMY2UP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23218192	23222748	.	-	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG002_chrY_T0001823;gene_id=HG002_chrY_G0000614;Parent=HG002_chrY_T0001823;transcript_name=HG002_chrY_T0001823;gene_name=RBMY2UP;ID=intron:HG002_chrY_T0001823:0;Name=RBMY2UP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23222749	23222851	.	-	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG002_chrY_T0001823;gene_id=HG002_chrY_G0000614;Parent=HG002_chrY_T0001823;transcript_name=HG002_chrY_T0001823;gene_name=RBMY2UP;ID=exon:HG002_chrY_T0001823:1;Name=RBMY2UP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23222852	23223254	.	-	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG002_chrY_T0001823;gene_id=HG002_chrY_G0000614;Parent=HG002_chrY_T0001823;transcript_name=HG002_chrY_T0001823;gene_name=RBMY2UP;ID=intron:HG002_chrY_T0001823:1;Name=RBMY2UP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23223255	23223362	.	-	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG002_chrY_T0001823;gene_id=HG002_chrY_G0000614;Parent=HG002_chrY_T0001823;transcript_name=HG002_chrY_T0001823;gene_name=RBMY2UP;ID=exon:HG002_chrY_T0001823:2;Name=RBMY2UP;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23235770	23237941	.	-	.	source_gene_common_name=TSPY23P;source_gene=ENSG00000229159.1;gene_id=HG002_chrY_G0000615;gene_biotype=unprocessed_pseudogene;gene_name=TSPY23P;gene_sources=liftoff;ID=HG002_chrY_G0000615;Name=TSPY23P
HG002_chrY	CAT	transcript	23235770	23237941	1000	-	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;transcript_id=HG002_chrY_T0001824;gene_id=HG002_chrY_G0000615;Parent=HG002_chrY_G0000615;transcript_name=HG002_chrY_T0001824;gene_name=TSPY23P;ID=HG002_chrY_T0001824;Name=TSPY23P
HG002_chrY	CAT	exon	23235770	23235817	.	-	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;transcript_id=HG002_chrY_T0001824;gene_id=HG002_chrY_G0000615;Parent=HG002_chrY_T0001824;transcript_name=HG002_chrY_T0001824;gene_name=TSPY23P;ID=exon:HG002_chrY_T0001824:0;Name=TSPY23P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23235818	23235934	.	-	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;transcript_id=HG002_chrY_T0001824;gene_id=HG002_chrY_G0000615;Parent=HG002_chrY_T0001824;transcript_name=HG002_chrY_T0001824;gene_name=TSPY23P;ID=intron:HG002_chrY_T0001824:0;Name=TSPY23P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23235935	23236078	.	-	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;transcript_id=HG002_chrY_T0001824;gene_id=HG002_chrY_G0000615;Parent=HG002_chrY_T0001824;transcript_name=HG002_chrY_T0001824;gene_name=TSPY23P;ID=exon:HG002_chrY_T0001824:1;Name=TSPY23P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23236079	23236165	.	-	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;transcript_id=HG002_chrY_T0001824;gene_id=HG002_chrY_G0000615;Parent=HG002_chrY_T0001824;transcript_name=HG002_chrY_T0001824;gene_name=TSPY23P;ID=intron:HG002_chrY_T0001824:1;Name=TSPY23P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23236166	23236236	.	-	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;transcript_id=HG002_chrY_T0001824;gene_id=HG002_chrY_G0000615;Parent=HG002_chrY_T0001824;transcript_name=HG002_chrY_T0001824;gene_name=TSPY23P;ID=exon:HG002_chrY_T0001824:2;Name=TSPY23P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23236237	23236474	.	-	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;transcript_id=HG002_chrY_T0001824;gene_id=HG002_chrY_G0000615;Parent=HG002_chrY_T0001824;transcript_name=HG002_chrY_T0001824;gene_name=TSPY23P;ID=intron:HG002_chrY_T0001824:2;Name=TSPY23P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23236475	23236556	.	-	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;transcript_id=HG002_chrY_T0001824;gene_id=HG002_chrY_G0000615;Parent=HG002_chrY_T0001824;transcript_name=HG002_chrY_T0001824;gene_name=TSPY23P;ID=exon:HG002_chrY_T0001824:3;Name=TSPY23P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23236557	23237547	.	-	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;transcript_id=HG002_chrY_T0001824;gene_id=HG002_chrY_G0000615;Parent=HG002_chrY_T0001824;transcript_name=HG002_chrY_T0001824;gene_name=TSPY23P;ID=intron:HG002_chrY_T0001824:3;Name=TSPY23P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23237548	23237941	.	-	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;transcript_id=HG002_chrY_T0001824;gene_id=HG002_chrY_G0000615;Parent=HG002_chrY_T0001824;transcript_name=HG002_chrY_T0001824;gene_name=TSPY23P;ID=exon:HG002_chrY_T0001824:4;Name=TSPY23P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23238783	23253251	.	+	.	source_gene_common_name=RBMY1J;source_gene=ENSG00000226941.9;alternative_source_transcripts=ENST00000250831.6;gene_id=HG002_chrY_G0000616;gene_biotype=protein_coding;gene_name=RBMY1J;gene_sources=liftoff;ID=HG002_chrY_G0000616;Name=RBMY1J
HG002_chrY	CAT	transcript	23238783	23253251	100	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_G0000616;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=HG002_chrY_T0001825;Name=RBMY1J
HG002_chrY	CAT	exon	23238783	23238956	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=exon:HG002_chrY_T0001825:0;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23238957	23240817	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=intron:HG002_chrY_T0001825:0;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23240818	23240930	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=exon:HG002_chrY_T0001825:1;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23240822	23240930	.	+	0	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=CDS:HG002_chrY_T0001825:0;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	23240822	23240824	.	+	0	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=start_codon:HG002_chrY_T0001825;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23240931	23241394	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=intron:HG002_chrY_T0001825:1;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23241395	23241498	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=exon:HG002_chrY_T0001825:2;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23241395	23241498	.	+	2	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=CDS:HG002_chrY_T0001825:1;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23241499	23244521	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=intron:HG002_chrY_T0001825:2;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23244522	23244699	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=exon:HG002_chrY_T0001825:3;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23244522	23244699	.	+	0	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=CDS:HG002_chrY_T0001825:2;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23244700	23246614	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=intron:HG002_chrY_T0001825:3;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23246615	23246767	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=exon:HG002_chrY_T0001825:4;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23246615	23246767	.	+	2	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=CDS:HG002_chrY_T0001825:3;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23246768	23248777	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=intron:HG002_chrY_T0001825:4;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23248778	23248892	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=exon:HG002_chrY_T0001825:5;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23248778	23248892	.	+	2	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=CDS:HG002_chrY_T0001825:4;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23248893	23249847	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=intron:HG002_chrY_T0001825:5;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23249848	23249958	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=exon:HG002_chrY_T0001825:6;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23249848	23249958	.	+	1	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=CDS:HG002_chrY_T0001825:5;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23249959	23250398	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=intron:HG002_chrY_T0001825:6;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23250399	23250509	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=exon:HG002_chrY_T0001825:7;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23250399	23250509	.	+	1	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=CDS:HG002_chrY_T0001825:6;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23250510	23250943	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=intron:HG002_chrY_T0001825:7;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23250944	23251054	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=exon:HG002_chrY_T0001825:8;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23250944	23251054	.	+	1	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=CDS:HG002_chrY_T0001825:7;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23251055	23251977	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=intron:HG002_chrY_T0001825:8;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23251978	23252088	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=exon:HG002_chrY_T0001825:9;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23251978	23252088	.	+	1	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=CDS:HG002_chrY_T0001825:8;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23252089	23252174	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=intron:HG002_chrY_T0001825:9;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23252175	23252263	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=exon:HG002_chrY_T0001825:10;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23252175	23252263	.	+	1	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=CDS:HG002_chrY_T0001825:9;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23252264	23252674	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=intron:HG002_chrY_T0001825:10;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23252675	23253251	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=exon:HG002_chrY_T0001825:11;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23252675	23252973	.	+	2	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=CDS:HG002_chrY_T0001825:10;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	23252971	23252973	.	+	0	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG002_chrY_T0001825;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001825;transcript_name=HG002_chrY_T0001825;gene_name=RBMY1J;ID=stop_codon:HG002_chrY_T0001825;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	23238834	23253251	1000	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG002_chrY_T0001826;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_G0000616;transcript_name=HG002_chrY_T0001826;gene_name=RBMY1J;ID=HG002_chrY_T0001826;Name=RBMY1J
HG002_chrY	CAT	exon	23238834	23238956	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG002_chrY_T0001826;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001826;transcript_name=HG002_chrY_T0001826;gene_name=RBMY1J;ID=exon:HG002_chrY_T0001826:0;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23238957	23240817	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG002_chrY_T0001826;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001826;transcript_name=HG002_chrY_T0001826;gene_name=RBMY1J;ID=intron:HG002_chrY_T0001826:0;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23240818	23240930	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG002_chrY_T0001826;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001826;transcript_name=HG002_chrY_T0001826;gene_name=RBMY1J;ID=exon:HG002_chrY_T0001826:1;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23240931	23241394	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG002_chrY_T0001826;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001826;transcript_name=HG002_chrY_T0001826;gene_name=RBMY1J;ID=intron:HG002_chrY_T0001826:1;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23241395	23241498	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG002_chrY_T0001826;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001826;transcript_name=HG002_chrY_T0001826;gene_name=RBMY1J;ID=exon:HG002_chrY_T0001826:2;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23241499	23246614	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG002_chrY_T0001826;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001826;transcript_name=HG002_chrY_T0001826;gene_name=RBMY1J;ID=intron:HG002_chrY_T0001826:2;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23246615	23246767	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG002_chrY_T0001826;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001826;transcript_name=HG002_chrY_T0001826;gene_name=RBMY1J;ID=exon:HG002_chrY_T0001826:3;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23246768	23248777	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG002_chrY_T0001826;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001826;transcript_name=HG002_chrY_T0001826;gene_name=RBMY1J;ID=intron:HG002_chrY_T0001826:3;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23248778	23248892	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG002_chrY_T0001826;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001826;transcript_name=HG002_chrY_T0001826;gene_name=RBMY1J;ID=exon:HG002_chrY_T0001826:4;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23248893	23249847	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG002_chrY_T0001826;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001826;transcript_name=HG002_chrY_T0001826;gene_name=RBMY1J;ID=intron:HG002_chrY_T0001826:4;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23249848	23249958	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG002_chrY_T0001826;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001826;transcript_name=HG002_chrY_T0001826;gene_name=RBMY1J;ID=exon:HG002_chrY_T0001826:5;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23249959	23250398	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG002_chrY_T0001826;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001826;transcript_name=HG002_chrY_T0001826;gene_name=RBMY1J;ID=intron:HG002_chrY_T0001826:5;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23250399	23250509	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG002_chrY_T0001826;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001826;transcript_name=HG002_chrY_T0001826;gene_name=RBMY1J;ID=exon:HG002_chrY_T0001826:6;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23250510	23250943	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG002_chrY_T0001826;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001826;transcript_name=HG002_chrY_T0001826;gene_name=RBMY1J;ID=intron:HG002_chrY_T0001826:6;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23250944	23251054	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG002_chrY_T0001826;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001826;transcript_name=HG002_chrY_T0001826;gene_name=RBMY1J;ID=exon:HG002_chrY_T0001826:7;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23251055	23251977	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG002_chrY_T0001826;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001826;transcript_name=HG002_chrY_T0001826;gene_name=RBMY1J;ID=intron:HG002_chrY_T0001826:7;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23251978	23252088	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG002_chrY_T0001826;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001826;transcript_name=HG002_chrY_T0001826;gene_name=RBMY1J;ID=exon:HG002_chrY_T0001826:8;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23252089	23252174	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG002_chrY_T0001826;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001826;transcript_name=HG002_chrY_T0001826;gene_name=RBMY1J;ID=intron:HG002_chrY_T0001826:8;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23252175	23252263	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG002_chrY_T0001826;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001826;transcript_name=HG002_chrY_T0001826;gene_name=RBMY1J;ID=exon:HG002_chrY_T0001826:9;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23252264	23252674	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG002_chrY_T0001826;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001826;transcript_name=HG002_chrY_T0001826;gene_name=RBMY1J;ID=intron:HG002_chrY_T0001826:9;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23252675	23253251	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG002_chrY_T0001826;gene_id=HG002_chrY_G0000616;Parent=HG002_chrY_T0001826;transcript_name=HG002_chrY_T0001826;gene_name=RBMY1J;ID=exon:HG002_chrY_T0001826:10;Name=RBMY1J;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23274296	23350026	.	+	.	source_gene_common_name=ENSG00000235059;source_gene=ENSG00000235059.7;alternative_source_transcripts=ENST00000446299.6;gene_id=HG002_chrY_G0000617;gene_biotype=lncRNA;gene_name=ENSG00000235059;gene_sources=liftoff;ID=HG002_chrY_G0000617;Name=ENSG00000235059
HG002_chrY	CAT	transcript	23274296	23320088	1000	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG002_chrY_T0001827;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_G0000617;transcript_name=HG002_chrY_T0001827;gene_name=ENSG00000235059;ID=HG002_chrY_T0001827;Name=ENSG00000235059
HG002_chrY	CAT	exon	23274296	23274512	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG002_chrY_T0001827;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001827;transcript_name=HG002_chrY_T0001827;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001827:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23274513	23274846	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG002_chrY_T0001827;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001827;transcript_name=HG002_chrY_T0001827;gene_name=ENSG00000235059;ID=intron:HG002_chrY_T0001827:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23274847	23275156	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG002_chrY_T0001827;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001827;transcript_name=HG002_chrY_T0001827;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001827:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23275157	23281703	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG002_chrY_T0001827;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001827;transcript_name=HG002_chrY_T0001827;gene_name=ENSG00000235059;ID=intron:HG002_chrY_T0001827:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23281704	23281844	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG002_chrY_T0001827;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001827;transcript_name=HG002_chrY_T0001827;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001827:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23281845	23291811	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG002_chrY_T0001827;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001827;transcript_name=HG002_chrY_T0001827;gene_name=ENSG00000235059;ID=intron:HG002_chrY_T0001827:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23291812	23292034	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG002_chrY_T0001827;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001827;transcript_name=HG002_chrY_T0001827;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001827:3;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23292035	23292342	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG002_chrY_T0001827;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001827;transcript_name=HG002_chrY_T0001827;gene_name=ENSG00000235059;ID=intron:HG002_chrY_T0001827:3;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23292343	23292428	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG002_chrY_T0001827;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001827;transcript_name=HG002_chrY_T0001827;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001827:4;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23292429	23299606	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG002_chrY_T0001827;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001827;transcript_name=HG002_chrY_T0001827;gene_name=ENSG00000235059;ID=intron:HG002_chrY_T0001827:4;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23299607	23299725	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG002_chrY_T0001827;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001827;transcript_name=HG002_chrY_T0001827;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001827:5;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23299726	23300155	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG002_chrY_T0001827;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001827;transcript_name=HG002_chrY_T0001827;gene_name=ENSG00000235059;ID=intron:HG002_chrY_T0001827:5;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23300156	23300509	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG002_chrY_T0001827;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001827;transcript_name=HG002_chrY_T0001827;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001827:6;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23300510	23314138	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG002_chrY_T0001827;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001827;transcript_name=HG002_chrY_T0001827;gene_name=ENSG00000235059;ID=intron:HG002_chrY_T0001827:6;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23314139	23314228	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG002_chrY_T0001827;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001827;transcript_name=HG002_chrY_T0001827;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001827:7;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23314229	23315694	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG002_chrY_T0001827;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001827;transcript_name=HG002_chrY_T0001827;gene_name=ENSG00000235059;ID=intron:HG002_chrY_T0001827:7;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23315695	23316030	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG002_chrY_T0001827;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001827;transcript_name=HG002_chrY_T0001827;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001827:8;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23316031	23317830	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG002_chrY_T0001827;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001827;transcript_name=HG002_chrY_T0001827;gene_name=ENSG00000235059;ID=intron:HG002_chrY_T0001827:8;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23317831	23317916	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG002_chrY_T0001827;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001827;transcript_name=HG002_chrY_T0001827;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001827:9;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23317917	23318036	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG002_chrY_T0001827;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001827;transcript_name=HG002_chrY_T0001827;gene_name=ENSG00000235059;ID=intron:HG002_chrY_T0001827:9;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23318037	23318233	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG002_chrY_T0001827;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001827;transcript_name=HG002_chrY_T0001827;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001827:10;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23318234	23318777	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG002_chrY_T0001827;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001827;transcript_name=HG002_chrY_T0001827;gene_name=ENSG00000235059;ID=intron:HG002_chrY_T0001827:10;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23318778	23318895	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG002_chrY_T0001827;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001827;transcript_name=HG002_chrY_T0001827;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001827:11;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23318896	23319410	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG002_chrY_T0001827;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001827;transcript_name=HG002_chrY_T0001827;gene_name=ENSG00000235059;ID=intron:HG002_chrY_T0001827:11;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23319411	23320088	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG002_chrY_T0001827;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001827;transcript_name=HG002_chrY_T0001827;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001827:12;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	23300313	23320275	1000	+	.	source_transcript=ENST00000801163.1;source_transcript_name=ENST00000801163;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801163.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801163.1,ENST00000775784.1;transcript_id=HG002_chrY_T0001830;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_G0000617;transcript_name=HG002_chrY_T0001830;gene_name=ENSG00000235059;ID=HG002_chrY_T0001830;Name=ENSG00000235059
HG002_chrY	CAT	exon	23300313	23300509	.	+	.	source_transcript=ENST00000801163.1;source_transcript_name=ENST00000801163;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801163.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801163.1,ENST00000775784.1;transcript_id=HG002_chrY_T0001830;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001830;transcript_name=HG002_chrY_T0001830;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001830:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23300510	23318773	.	+	.	source_transcript=ENST00000801163.1;source_transcript_name=ENST00000801163;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801163.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801163.1,ENST00000775784.1;transcript_id=HG002_chrY_T0001830;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001830;transcript_name=HG002_chrY_T0001830;gene_name=ENSG00000235059;ID=intron:HG002_chrY_T0001830:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23318774	23318895	.	+	.	source_transcript=ENST00000801163.1;source_transcript_name=ENST00000801163;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801163.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801163.1,ENST00000775784.1;transcript_id=HG002_chrY_T0001830;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001830;transcript_name=HG002_chrY_T0001830;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001830:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23318896	23319410	.	+	.	source_transcript=ENST00000801163.1;source_transcript_name=ENST00000801163;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801163.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801163.1,ENST00000775784.1;transcript_id=HG002_chrY_T0001830;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001830;transcript_name=HG002_chrY_T0001830;gene_name=ENSG00000235059;ID=intron:HG002_chrY_T0001830:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23319411	23320275	.	+	.	source_transcript=ENST00000801163.1;source_transcript_name=ENST00000801163;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801163.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801163.1,ENST00000775784.1;transcript_id=HG002_chrY_T0001830;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001830;transcript_name=HG002_chrY_T0001830;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001830:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	23314067	23320268	1000	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1;transcript_id=HG002_chrY_T0001831;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_G0000617;transcript_name=HG002_chrY_T0001831;gene_name=ENSG00000235059;ID=HG002_chrY_T0001831;Name=ENSG00000235059
HG002_chrY	CAT	exon	23314067	23314228	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1;transcript_id=HG002_chrY_T0001831;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001831;transcript_name=HG002_chrY_T0001831;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001831:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23314229	23315694	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1;transcript_id=HG002_chrY_T0001831;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001831;transcript_name=HG002_chrY_T0001831;gene_name=ENSG00000235059;ID=intron:HG002_chrY_T0001831:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23315695	23316030	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1;transcript_id=HG002_chrY_T0001831;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001831;transcript_name=HG002_chrY_T0001831;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001831:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23316031	23318773	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1;transcript_id=HG002_chrY_T0001831;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001831;transcript_name=HG002_chrY_T0001831;gene_name=ENSG00000235059;ID=intron:HG002_chrY_T0001831:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23318774	23318895	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1;transcript_id=HG002_chrY_T0001831;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001831;transcript_name=HG002_chrY_T0001831;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001831:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23318896	23319410	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1;transcript_id=HG002_chrY_T0001831;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001831;transcript_name=HG002_chrY_T0001831;gene_name=ENSG00000235059;ID=intron:HG002_chrY_T0001831:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23319411	23320268	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1;transcript_id=HG002_chrY_T0001831;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001831;transcript_name=HG002_chrY_T0001831;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001831:3;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	23315911	23320968	1000	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1,ENST00000417910.5;transcript_id=HG002_chrY_T0001832;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_G0000617;transcript_name=HG002_chrY_T0001832;gene_name=ENSG00000235059;ID=HG002_chrY_T0001832;Name=ENSG00000235059
HG002_chrY	CAT	exon	23315911	23316030	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1,ENST00000417910.5;transcript_id=HG002_chrY_T0001832;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001832;transcript_name=HG002_chrY_T0001832;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001832:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23316031	23318777	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1,ENST00000417910.5;transcript_id=HG002_chrY_T0001832;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001832;transcript_name=HG002_chrY_T0001832;gene_name=ENSG00000235059;ID=intron:HG002_chrY_T0001832:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23318778	23318895	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1,ENST00000417910.5;transcript_id=HG002_chrY_T0001832;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001832;transcript_name=HG002_chrY_T0001832;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001832:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23318896	23319410	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1,ENST00000417910.5;transcript_id=HG002_chrY_T0001832;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001832;transcript_name=HG002_chrY_T0001832;gene_name=ENSG00000235059;ID=intron:HG002_chrY_T0001832:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23319411	23319675	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1,ENST00000417910.5;transcript_id=HG002_chrY_T0001832;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001832;transcript_name=HG002_chrY_T0001832;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001832:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23319676	23320726	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1,ENST00000417910.5;transcript_id=HG002_chrY_T0001832;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001832;transcript_name=HG002_chrY_T0001832;gene_name=ENSG00000235059;ID=intron:HG002_chrY_T0001832:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23320727	23320968	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1,ENST00000417910.5;transcript_id=HG002_chrY_T0001832;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001832;transcript_name=HG002_chrY_T0001832;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001832:3;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	23319411	23350026	1000	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=299.93399999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6,ENST00000303804.6;transcript_id=HG002_chrY_T0001833;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_G0000617;transcript_name=HG002_chrY_T0001833;gene_name=ENSG00000235059;ID=HG002_chrY_T0001833;Name=ENSG00000235059
HG002_chrY	CAT	exon	23319411	23319675	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6,ENST00000303804.6;transcript_id=HG002_chrY_T0001833;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001833;transcript_name=HG002_chrY_T0001833;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001833:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23319676	23325772	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6,ENST00000303804.6;transcript_id=HG002_chrY_T0001833;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001833;transcript_name=HG002_chrY_T0001833;gene_name=ENSG00000235059;ID=intron:HG002_chrY_T0001833:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23325773	23325861	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6,ENST00000303804.6;transcript_id=HG002_chrY_T0001833;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001833;transcript_name=HG002_chrY_T0001833;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001833:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23325862	23325962	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6,ENST00000303804.6;transcript_id=HG002_chrY_T0001833;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001833;transcript_name=HG002_chrY_T0001833;gene_name=ENSG00000235059;ID=intron:HG002_chrY_T0001833:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23325963	23326049	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6,ENST00000303804.6;transcript_id=HG002_chrY_T0001833;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001833;transcript_name=HG002_chrY_T0001833;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001833:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23326050	23336890	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6,ENST00000303804.6;transcript_id=HG002_chrY_T0001833;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001833;transcript_name=HG002_chrY_T0001833;gene_name=ENSG00000235059;ID=intron:HG002_chrY_T0001833:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23336891	23337011	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6,ENST00000303804.6;transcript_id=HG002_chrY_T0001833;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001833;transcript_name=HG002_chrY_T0001833;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001833:3;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23337012	23339586	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6,ENST00000303804.6;transcript_id=HG002_chrY_T0001833;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001833;transcript_name=HG002_chrY_T0001833;gene_name=ENSG00000235059;ID=intron:HG002_chrY_T0001833:3;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23339587	23339702	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6,ENST00000303804.6;transcript_id=HG002_chrY_T0001833;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001833;transcript_name=HG002_chrY_T0001833;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001833:4;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23339703	23349200	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6,ENST00000303804.6;transcript_id=HG002_chrY_T0001833;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001833;transcript_name=HG002_chrY_T0001833;gene_name=ENSG00000235059;ID=intron:HG002_chrY_T0001833:4;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23349201	23350026	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6,ENST00000303804.6;transcript_id=HG002_chrY_T0001833;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001833;transcript_name=HG002_chrY_T0001833;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001833:5;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	23319411	23350026	1000	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=299.938;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2,ENST00000472391.2;transcript_id=HG002_chrY_T0001834;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_G0000617;transcript_name=HG002_chrY_T0001834;gene_name=ENSG00000235059;ID=HG002_chrY_T0001834;Name=ENSG00000235059
HG002_chrY	CAT	exon	23319411	23319675	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2,ENST00000472391.2;transcript_id=HG002_chrY_T0001834;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001834;transcript_name=HG002_chrY_T0001834;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001834:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23319676	23325772	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2,ENST00000472391.2;transcript_id=HG002_chrY_T0001834;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001834;transcript_name=HG002_chrY_T0001834;gene_name=ENSG00000235059;ID=intron:HG002_chrY_T0001834:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23325773	23325861	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2,ENST00000472391.2;transcript_id=HG002_chrY_T0001834;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001834;transcript_name=HG002_chrY_T0001834;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001834:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23325862	23325962	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2,ENST00000472391.2;transcript_id=HG002_chrY_T0001834;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001834;transcript_name=HG002_chrY_T0001834;gene_name=ENSG00000235059;ID=intron:HG002_chrY_T0001834:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23325963	23326049	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2,ENST00000472391.2;transcript_id=HG002_chrY_T0001834;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001834;transcript_name=HG002_chrY_T0001834;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001834:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23326050	23336890	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2,ENST00000472391.2;transcript_id=HG002_chrY_T0001834;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001834;transcript_name=HG002_chrY_T0001834;gene_name=ENSG00000235059;ID=intron:HG002_chrY_T0001834:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23336891	23337011	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2,ENST00000472391.2;transcript_id=HG002_chrY_T0001834;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001834;transcript_name=HG002_chrY_T0001834;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001834:3;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23337012	23339586	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2,ENST00000472391.2;transcript_id=HG002_chrY_T0001834;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001834;transcript_name=HG002_chrY_T0001834;gene_name=ENSG00000235059;ID=intron:HG002_chrY_T0001834:3;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23339587	23339702	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2,ENST00000472391.2;transcript_id=HG002_chrY_T0001834;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001834;transcript_name=HG002_chrY_T0001834;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001834:4;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23339703	23348023	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2,ENST00000472391.2;transcript_id=HG002_chrY_T0001834;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001834;transcript_name=HG002_chrY_T0001834;gene_name=ENSG00000235059;ID=intron:HG002_chrY_T0001834:4;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23348024	23348138	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2,ENST00000472391.2;transcript_id=HG002_chrY_T0001834;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001834;transcript_name=HG002_chrY_T0001834;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001834:5;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23348139	23349200	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2,ENST00000472391.2;transcript_id=HG002_chrY_T0001834;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001834;transcript_name=HG002_chrY_T0001834;gene_name=ENSG00000235059;ID=intron:HG002_chrY_T0001834:5;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23349201	23350026	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2,ENST00000472391.2;transcript_id=HG002_chrY_T0001834;gene_id=HG002_chrY_G0000617;Parent=HG002_chrY_T0001834;transcript_name=HG002_chrY_T0001834;gene_name=ENSG00000235059;ID=exon:HG002_chrY_T0001834:6;Name=ENSG00000235059;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23274965	23289849	.	-	.	source_gene_common_name=TTTY6;source_gene=ENSG00000131538.8;alternative_source_transcripts=ENST00000253838.4,ENST00000253848.4;gene_id=HG002_chrY_G0000618;gene_biotype=lncRNA;gene_name=TTTY6;gene_sources=liftoff;ID=HG002_chrY_G0000618;Name=TTTY6
HG002_chrY	CAT	transcript	23274965	23289849	1000	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253848.4;transcript_id=HG002_chrY_T0001828;gene_id=HG002_chrY_G0000618;Parent=HG002_chrY_G0000618;transcript_name=HG002_chrY_T0001828;gene_name=TTTY6;ID=HG002_chrY_T0001828;Name=TTTY6
HG002_chrY	CAT	exon	23274965	23275203	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253848.4;transcript_id=HG002_chrY_T0001828;gene_id=HG002_chrY_G0000618;Parent=HG002_chrY_T0001828;transcript_name=HG002_chrY_T0001828;gene_name=TTTY6;ID=exon:HG002_chrY_T0001828:0;Name=TTTY6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23275204	23276360	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253848.4;transcript_id=HG002_chrY_T0001828;gene_id=HG002_chrY_G0000618;Parent=HG002_chrY_T0001828;transcript_name=HG002_chrY_T0001828;gene_name=TTTY6;ID=intron:HG002_chrY_T0001828:0;Name=TTTY6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23276361	23276498	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253848.4;transcript_id=HG002_chrY_T0001828;gene_id=HG002_chrY_G0000618;Parent=HG002_chrY_T0001828;transcript_name=HG002_chrY_T0001828;gene_name=TTTY6;ID=exon:HG002_chrY_T0001828:1;Name=TTTY6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23276499	23276716	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253848.4;transcript_id=HG002_chrY_T0001828;gene_id=HG002_chrY_G0000618;Parent=HG002_chrY_T0001828;transcript_name=HG002_chrY_T0001828;gene_name=TTTY6;ID=intron:HG002_chrY_T0001828:1;Name=TTTY6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23276717	23276830	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253848.4;transcript_id=HG002_chrY_T0001828;gene_id=HG002_chrY_G0000618;Parent=HG002_chrY_T0001828;transcript_name=HG002_chrY_T0001828;gene_name=TTTY6;ID=exon:HG002_chrY_T0001828:2;Name=TTTY6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23276831	23279995	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253848.4;transcript_id=HG002_chrY_T0001828;gene_id=HG002_chrY_G0000618;Parent=HG002_chrY_T0001828;transcript_name=HG002_chrY_T0001828;gene_name=TTTY6;ID=intron:HG002_chrY_T0001828:2;Name=TTTY6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23279996	23280156	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253848.4;transcript_id=HG002_chrY_T0001828;gene_id=HG002_chrY_G0000618;Parent=HG002_chrY_T0001828;transcript_name=HG002_chrY_T0001828;gene_name=TTTY6;ID=exon:HG002_chrY_T0001828:3;Name=TTTY6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23280157	23282438	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253848.4;transcript_id=HG002_chrY_T0001828;gene_id=HG002_chrY_G0000618;Parent=HG002_chrY_T0001828;transcript_name=HG002_chrY_T0001828;gene_name=TTTY6;ID=intron:HG002_chrY_T0001828:3;Name=TTTY6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23282439	23282600	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253848.4;transcript_id=HG002_chrY_T0001828;gene_id=HG002_chrY_G0000618;Parent=HG002_chrY_T0001828;transcript_name=HG002_chrY_T0001828;gene_name=TTTY6;ID=exon:HG002_chrY_T0001828:4;Name=TTTY6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23282601	23287341	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253848.4;transcript_id=HG002_chrY_T0001828;gene_id=HG002_chrY_G0000618;Parent=HG002_chrY_T0001828;transcript_name=HG002_chrY_T0001828;gene_name=TTTY6;ID=intron:HG002_chrY_T0001828:4;Name=TTTY6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23287342	23287415	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253848.4;transcript_id=HG002_chrY_T0001828;gene_id=HG002_chrY_G0000618;Parent=HG002_chrY_T0001828;transcript_name=HG002_chrY_T0001828;gene_name=TTTY6;ID=exon:HG002_chrY_T0001828:5;Name=TTTY6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23287416	23289794	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253848.4;transcript_id=HG002_chrY_T0001828;gene_id=HG002_chrY_G0000618;Parent=HG002_chrY_T0001828;transcript_name=HG002_chrY_T0001828;gene_name=TTTY6;ID=intron:HG002_chrY_T0001828:5;Name=TTTY6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23289795	23289849	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253848.4;transcript_id=HG002_chrY_T0001828;gene_id=HG002_chrY_G0000618;Parent=HG002_chrY_T0001828;transcript_name=HG002_chrY_T0001828;gene_name=TTTY6;ID=exon:HG002_chrY_T0001828:6;Name=TTTY6;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	23274967	23279106	1000	-	.	source_transcript=ENST00000769610.1;source_transcript_name=TTTY6-202;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000769610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000769610.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000769610.1;transcript_id=HG002_chrY_T0001829;gene_id=HG002_chrY_G0000618;Parent=HG002_chrY_G0000618;transcript_name=HG002_chrY_T0001829;gene_name=TTTY6;ID=HG002_chrY_T0001829;Name=TTTY6
HG002_chrY	CAT	exon	23274967	23275203	.	-	.	source_transcript=ENST00000769610.1;source_transcript_name=TTTY6-202;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000769610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000769610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000769610.1;transcript_id=HG002_chrY_T0001829;gene_id=HG002_chrY_G0000618;Parent=HG002_chrY_T0001829;transcript_name=HG002_chrY_T0001829;gene_name=TTTY6;ID=exon:HG002_chrY_T0001829:0;Name=TTTY6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23275204	23278825	.	-	.	source_transcript=ENST00000769610.1;source_transcript_name=TTTY6-202;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000769610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000769610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000769610.1;transcript_id=HG002_chrY_T0001829;gene_id=HG002_chrY_G0000618;Parent=HG002_chrY_T0001829;transcript_name=HG002_chrY_T0001829;gene_name=TTTY6;ID=intron:HG002_chrY_T0001829:0;Name=TTTY6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23278826	23279106	.	-	.	source_transcript=ENST00000769610.1;source_transcript_name=TTTY6-202;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000769610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000769610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000769610.1;transcript_id=HG002_chrY_T0001829;gene_id=HG002_chrY_G0000618;Parent=HG002_chrY_T0001829;transcript_name=HG002_chrY_T0001829;gene_name=TTTY6;ID=exon:HG002_chrY_T0001829:1;Name=TTTY6;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23352631	23352962	.	-	.	source_gene_common_name=ELOCP8;source_gene=ENSG00000234131.1;alternative_source_transcripts=ENST00000439309.1;gene_id=HG002_chrY_G0000619;gene_biotype=processed_pseudogene;gene_name=ELOCP8;gene_sources=liftoff;ID=HG002_chrY_G0000619;Name=ELOCP8
HG002_chrY	CAT	transcript	23352631	23352962	1000	-	.	source_transcript=ENST00000439309.1;source_transcript_name=ELOCP8-201;source_gene=ENSG00000234131.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234131.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000439309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439309.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP8;alternative_source_transcripts=ENST00000439309.1;transcript_id=HG002_chrY_T0001835;gene_id=HG002_chrY_G0000619;Parent=HG002_chrY_G0000619;transcript_name=HG002_chrY_T0001835;gene_name=ELOCP8;ID=HG002_chrY_T0001835;Name=ELOCP8
HG002_chrY	CAT	exon	23352631	23352962	.	-	.	source_transcript=ENST00000439309.1;source_transcript_name=ELOCP8-201;source_gene=ENSG00000234131.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234131.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000439309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439309.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP8;alternative_source_transcripts=ENST00000439309.1;transcript_id=HG002_chrY_T0001835;gene_id=HG002_chrY_G0000619;Parent=HG002_chrY_T0001835;transcript_name=HG002_chrY_T0001835;gene_name=ELOCP8;ID=exon:HG002_chrY_T0001835:0;Name=ELOCP8;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23356070	23357084	.	-	.	source_gene_common_name=CDY13P;source_gene=ENSG00000224873.1;alternative_source_transcripts=ENST00000445813.1;gene_id=HG002_chrY_G0000620;gene_biotype=unprocessed_pseudogene;gene_name=CDY13P;gene_sources=liftoff;ID=HG002_chrY_G0000620;Name=CDY13P
HG002_chrY	CAT	transcript	23356070	23357084	1000	-	.	source_transcript=ENST00000445813.1;source_transcript_name=CDY13P-201;source_gene=ENSG00000224873.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224873.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445813.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY13P;alternative_source_transcripts=ENST00000445813.1;transcript_id=HG002_chrY_T0001836;gene_id=HG002_chrY_G0000620;Parent=HG002_chrY_G0000620;transcript_name=HG002_chrY_T0001836;gene_name=CDY13P;ID=HG002_chrY_T0001836;Name=CDY13P
HG002_chrY	CAT	exon	23356070	23357084	.	-	.	source_transcript=ENST00000445813.1;source_transcript_name=CDY13P-201;source_gene=ENSG00000224873.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224873.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445813.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY13P;alternative_source_transcripts=ENST00000445813.1;transcript_id=HG002_chrY_T0001836;gene_id=HG002_chrY_G0000620;Parent=HG002_chrY_T0001836;transcript_name=HG002_chrY_T0001836;gene_name=CDY13P;ID=exon:HG002_chrY_T0001836:0;Name=CDY13P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23363669	23372027	.	+	.	source_gene_common_name=USP9YP24;source_gene=ENSG00000230814.1;alternative_source_transcripts=ENST00000434374.1;gene_id=HG002_chrY_G0000621;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP24;gene_sources=liftoff;ID=HG002_chrY_G0000621;Name=USP9YP24
HG002_chrY	CAT	transcript	23363669	23372027	1000	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=HG002_chrY_T0001837;gene_id=HG002_chrY_G0000621;Parent=HG002_chrY_G0000621;transcript_name=HG002_chrY_T0001837;gene_name=USP9YP24;ID=HG002_chrY_T0001837;Name=USP9YP24
HG002_chrY	CAT	exon	23363669	23363889	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=HG002_chrY_T0001837;gene_id=HG002_chrY_G0000621;Parent=HG002_chrY_T0001837;transcript_name=HG002_chrY_T0001837;gene_name=USP9YP24;ID=exon:HG002_chrY_T0001837:0;Name=USP9YP24;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23363890	23365691	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=HG002_chrY_T0001837;gene_id=HG002_chrY_G0000621;Parent=HG002_chrY_T0001837;transcript_name=HG002_chrY_T0001837;gene_name=USP9YP24;ID=intron:HG002_chrY_T0001837:0;Name=USP9YP24;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23365692	23365810	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=HG002_chrY_T0001837;gene_id=HG002_chrY_G0000621;Parent=HG002_chrY_T0001837;transcript_name=HG002_chrY_T0001837;gene_name=USP9YP24;ID=exon:HG002_chrY_T0001837:1;Name=USP9YP24;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23365811	23367596	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=HG002_chrY_T0001837;gene_id=HG002_chrY_G0000621;Parent=HG002_chrY_T0001837;transcript_name=HG002_chrY_T0001837;gene_name=USP9YP24;ID=intron:HG002_chrY_T0001837:1;Name=USP9YP24;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23367597	23367785	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=HG002_chrY_T0001837;gene_id=HG002_chrY_G0000621;Parent=HG002_chrY_T0001837;transcript_name=HG002_chrY_T0001837;gene_name=USP9YP24;ID=exon:HG002_chrY_T0001837:2;Name=USP9YP24;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23367786	23370143	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=HG002_chrY_T0001837;gene_id=HG002_chrY_G0000621;Parent=HG002_chrY_T0001837;transcript_name=HG002_chrY_T0001837;gene_name=USP9YP24;ID=intron:HG002_chrY_T0001837:2;Name=USP9YP24;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23370144	23370272	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=HG002_chrY_T0001837;gene_id=HG002_chrY_G0000621;Parent=HG002_chrY_T0001837;transcript_name=HG002_chrY_T0001837;gene_name=USP9YP24;ID=exon:HG002_chrY_T0001837:3;Name=USP9YP24;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23370273	23371988	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=HG002_chrY_T0001837;gene_id=HG002_chrY_G0000621;Parent=HG002_chrY_T0001837;transcript_name=HG002_chrY_T0001837;gene_name=USP9YP24;ID=intron:HG002_chrY_T0001837:3;Name=USP9YP24;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23371989	23372027	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=HG002_chrY_T0001837;gene_id=HG002_chrY_G0000621;Parent=HG002_chrY_T0001837;transcript_name=HG002_chrY_T0001837;gene_name=USP9YP24;ID=exon:HG002_chrY_T0001837:4;Name=USP9YP24;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23372307	23420652	.	+	.	source_gene_common_name=ENSG00000300637;source_gene=ENSG00000300637.1;gene_id=HG002_chrY_G0000622;gene_biotype=lncRNA;gene_name=ENSG00000300637;gene_sources=liftoff;ID=HG002_chrY_G0000622;Name=ENSG00000300637
HG002_chrY	CAT	transcript	23372307	23413153	1000	+	.	source_transcript=ENST00000773078.1;source_transcript_name=ENST00000773078;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773078.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG002_chrY_T0001838;gene_id=HG002_chrY_G0000622;Parent=HG002_chrY_G0000622;transcript_name=HG002_chrY_T0001838;gene_name=ENSG00000300637;ID=HG002_chrY_T0001838;Name=ENSG00000300637
HG002_chrY	CAT	exon	23372307	23372628	.	+	.	source_transcript=ENST00000773078.1;source_transcript_name=ENST00000773078;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG002_chrY_T0001838;gene_id=HG002_chrY_G0000622;Parent=HG002_chrY_T0001838;transcript_name=HG002_chrY_T0001838;gene_name=ENSG00000300637;ID=exon:HG002_chrY_T0001838:0;Name=ENSG00000300637;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23372629	23377192	.	+	.	source_transcript=ENST00000773078.1;source_transcript_name=ENST00000773078;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG002_chrY_T0001838;gene_id=HG002_chrY_G0000622;Parent=HG002_chrY_T0001838;transcript_name=HG002_chrY_T0001838;gene_name=ENSG00000300637;ID=intron:HG002_chrY_T0001838:0;Name=ENSG00000300637;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23377193	23377354	.	+	.	source_transcript=ENST00000773078.1;source_transcript_name=ENST00000773078;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG002_chrY_T0001838;gene_id=HG002_chrY_G0000622;Parent=HG002_chrY_T0001838;transcript_name=HG002_chrY_T0001838;gene_name=ENSG00000300637;ID=exon:HG002_chrY_T0001838:1;Name=ENSG00000300637;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23377355	23412524	.	+	.	source_transcript=ENST00000773078.1;source_transcript_name=ENST00000773078;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG002_chrY_T0001838;gene_id=HG002_chrY_G0000622;Parent=HG002_chrY_T0001838;transcript_name=HG002_chrY_T0001838;gene_name=ENSG00000300637;ID=intron:HG002_chrY_T0001838:1;Name=ENSG00000300637;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23412525	23413153	.	+	.	source_transcript=ENST00000773078.1;source_transcript_name=ENST00000773078;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG002_chrY_T0001838;gene_id=HG002_chrY_G0000622;Parent=HG002_chrY_T0001838;transcript_name=HG002_chrY_T0001838;gene_name=ENSG00000300637;ID=exon:HG002_chrY_T0001838:2;Name=ENSG00000300637;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	23372367	23420652	1000	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG002_chrY_T0001839;gene_id=HG002_chrY_G0000622;Parent=HG002_chrY_G0000622;transcript_name=HG002_chrY_T0001839;gene_name=ENSG00000300637;ID=HG002_chrY_T0001839;Name=ENSG00000300637
HG002_chrY	CAT	exon	23372367	23372628	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG002_chrY_T0001839;gene_id=HG002_chrY_G0000622;Parent=HG002_chrY_T0001839;transcript_name=HG002_chrY_T0001839;gene_name=ENSG00000300637;ID=exon:HG002_chrY_T0001839:0;Name=ENSG00000300637;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23372629	23377192	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG002_chrY_T0001839;gene_id=HG002_chrY_G0000622;Parent=HG002_chrY_T0001839;transcript_name=HG002_chrY_T0001839;gene_name=ENSG00000300637;ID=intron:HG002_chrY_T0001839:0;Name=ENSG00000300637;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23377193	23377354	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG002_chrY_T0001839;gene_id=HG002_chrY_G0000622;Parent=HG002_chrY_T0001839;transcript_name=HG002_chrY_T0001839;gene_name=ENSG00000300637;ID=exon:HG002_chrY_T0001839:1;Name=ENSG00000300637;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23377355	23412524	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG002_chrY_T0001839;gene_id=HG002_chrY_G0000622;Parent=HG002_chrY_T0001839;transcript_name=HG002_chrY_T0001839;gene_name=ENSG00000300637;ID=intron:HG002_chrY_T0001839:1;Name=ENSG00000300637;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23412525	23412827	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG002_chrY_T0001839;gene_id=HG002_chrY_G0000622;Parent=HG002_chrY_T0001839;transcript_name=HG002_chrY_T0001839;gene_name=ENSG00000300637;ID=exon:HG002_chrY_T0001839:2;Name=ENSG00000300637;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23412828	23420377	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG002_chrY_T0001839;gene_id=HG002_chrY_G0000622;Parent=HG002_chrY_T0001839;transcript_name=HG002_chrY_T0001839;gene_name=ENSG00000300637;ID=intron:HG002_chrY_T0001839:2;Name=ENSG00000300637;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23420378	23420652	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG002_chrY_T0001839;gene_id=HG002_chrY_G0000622;Parent=HG002_chrY_T0001839;transcript_name=HG002_chrY_T0001839;gene_name=ENSG00000300637;ID=exon:HG002_chrY_T0001839:3;Name=ENSG00000300637;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23372435	23373237	.	+	.	source_gene_common_name=HSFY7P;source_gene=ENSG00000228571.1;gene_id=HG002_chrY_G0000623;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=HSFY7P;gene_sources=liftoff;ID=HG002_chrY_G0000623;Name=HSFY7P
HG002_chrY	CAT	transcript	23372435	23373237	1000	+	.	source_transcript=ENST00000432672.1;source_transcript_name=HSFY7P-201;source_gene=ENSG00000228571.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000228571.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432672.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY7P;transcript_id=HG002_chrY_T0001840;gene_id=HG002_chrY_G0000623;Parent=HG002_chrY_G0000623;transcript_name=HG002_chrY_T0001840;gene_name=HSFY7P;ID=HG002_chrY_T0001840;Name=HSFY7P
HG002_chrY	CAT	exon	23372435	23372593	.	+	.	source_transcript=ENST00000432672.1;source_transcript_name=HSFY7P-201;source_gene=ENSG00000228571.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000228571.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432672.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY7P;transcript_id=HG002_chrY_T0001840;gene_id=HG002_chrY_G0000623;Parent=HG002_chrY_T0001840;transcript_name=HG002_chrY_T0001840;gene_name=HSFY7P;ID=exon:HG002_chrY_T0001840:0;Name=HSFY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23372594	23373078	.	+	.	source_transcript=ENST00000432672.1;source_transcript_name=HSFY7P-201;source_gene=ENSG00000228571.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000228571.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432672.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY7P;transcript_id=HG002_chrY_T0001840;gene_id=HG002_chrY_G0000623;Parent=HG002_chrY_T0001840;transcript_name=HG002_chrY_T0001840;gene_name=HSFY7P;ID=intron:HG002_chrY_T0001840:0;Name=HSFY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23373079	23373237	.	+	.	source_transcript=ENST00000432672.1;source_transcript_name=HSFY7P-201;source_gene=ENSG00000228571.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000228571.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432672.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY7P;transcript_id=HG002_chrY_T0001840;gene_id=HG002_chrY_G0000623;Parent=HG002_chrY_T0001840;transcript_name=HG002_chrY_T0001840;gene_name=HSFY7P;ID=exon:HG002_chrY_T0001840:1;Name=HSFY7P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23390292	23393460	.	-	.	source_gene_common_name=ENSG00000295422;source_gene=ENSG00000295422.1;gene_id=HG002_chrY_G0000624;gene_biotype=lncRNA;gene_name=ENSG00000295422;gene_sources=liftoff;ID=HG002_chrY_G0000624;Name=ENSG00000295422
HG002_chrY	CAT	transcript	23390292	23393460	1000	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG002_chrY_T0001841;gene_id=HG002_chrY_G0000624;Parent=HG002_chrY_G0000624;transcript_name=HG002_chrY_T0001841;gene_name=ENSG00000295422;ID=HG002_chrY_T0001841;Name=ENSG00000295422
HG002_chrY	CAT	exon	23390292	23391636	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG002_chrY_T0001841;gene_id=HG002_chrY_G0000624;Parent=HG002_chrY_T0001841;transcript_name=HG002_chrY_T0001841;gene_name=ENSG00000295422;ID=exon:HG002_chrY_T0001841:0;Name=ENSG00000295422;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23391637	23393171	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG002_chrY_T0001841;gene_id=HG002_chrY_G0000624;Parent=HG002_chrY_T0001841;transcript_name=HG002_chrY_T0001841;gene_name=ENSG00000295422;ID=intron:HG002_chrY_T0001841:0;Name=ENSG00000295422;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23393172	23393232	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG002_chrY_T0001841;gene_id=HG002_chrY_G0000624;Parent=HG002_chrY_T0001841;transcript_name=HG002_chrY_T0001841;gene_name=ENSG00000295422;ID=exon:HG002_chrY_T0001841:1;Name=ENSG00000295422;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23393233	23393349	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG002_chrY_T0001841;gene_id=HG002_chrY_G0000624;Parent=HG002_chrY_T0001841;transcript_name=HG002_chrY_T0001841;gene_name=ENSG00000295422;ID=intron:HG002_chrY_T0001841:1;Name=ENSG00000295422;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23393350	23393460	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG002_chrY_T0001841;gene_id=HG002_chrY_G0000624;Parent=HG002_chrY_T0001841;transcript_name=HG002_chrY_T0001841;gene_name=ENSG00000295422;ID=exon:HG002_chrY_T0001841:2;Name=ENSG00000295422;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23416382	23449470	.	-	.	source_gene_common_name=OFD1P9Y;source_gene=ENSG00000230476.1;alternative_source_transcripts=ENST00000417699.1;gene_id=HG002_chrY_G0000625;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P9Y;gene_sources=liftoff;ID=HG002_chrY_G0000625;Name=OFD1P9Y
HG002_chrY	CAT	transcript	23416382	23449470	1000	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG002_chrY_T0001842;gene_id=HG002_chrY_G0000625;Parent=HG002_chrY_G0000625;transcript_name=HG002_chrY_T0001842;gene_name=OFD1P9Y;ID=HG002_chrY_T0001842;Name=OFD1P9Y
HG002_chrY	CAT	exon	23416382	23416475	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG002_chrY_T0001842;gene_id=HG002_chrY_G0000625;Parent=HG002_chrY_T0001842;transcript_name=HG002_chrY_T0001842;gene_name=OFD1P9Y;ID=exon:HG002_chrY_T0001842:0;Name=OFD1P9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23416476	23416773	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG002_chrY_T0001842;gene_id=HG002_chrY_G0000625;Parent=HG002_chrY_T0001842;transcript_name=HG002_chrY_T0001842;gene_name=OFD1P9Y;ID=intron:HG002_chrY_T0001842:0;Name=OFD1P9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23416774	23416840	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG002_chrY_T0001842;gene_id=HG002_chrY_G0000625;Parent=HG002_chrY_T0001842;transcript_name=HG002_chrY_T0001842;gene_name=OFD1P9Y;ID=exon:HG002_chrY_T0001842:1;Name=OFD1P9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23416841	23418036	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG002_chrY_T0001842;gene_id=HG002_chrY_G0000625;Parent=HG002_chrY_T0001842;transcript_name=HG002_chrY_T0001842;gene_name=OFD1P9Y;ID=intron:HG002_chrY_T0001842:1;Name=OFD1P9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23418037	23418191	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG002_chrY_T0001842;gene_id=HG002_chrY_G0000625;Parent=HG002_chrY_T0001842;transcript_name=HG002_chrY_T0001842;gene_name=OFD1P9Y;ID=exon:HG002_chrY_T0001842:2;Name=OFD1P9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23418192	23424824	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG002_chrY_T0001842;gene_id=HG002_chrY_G0000625;Parent=HG002_chrY_T0001842;transcript_name=HG002_chrY_T0001842;gene_name=OFD1P9Y;ID=intron:HG002_chrY_T0001842:2;Name=OFD1P9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23424825	23424925	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG002_chrY_T0001842;gene_id=HG002_chrY_G0000625;Parent=HG002_chrY_T0001842;transcript_name=HG002_chrY_T0001842;gene_name=OFD1P9Y;ID=exon:HG002_chrY_T0001842:3;Name=OFD1P9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23424926	23444262	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG002_chrY_T0001842;gene_id=HG002_chrY_G0000625;Parent=HG002_chrY_T0001842;transcript_name=HG002_chrY_T0001842;gene_name=OFD1P9Y;ID=intron:HG002_chrY_T0001842:3;Name=OFD1P9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23444263	23444373	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG002_chrY_T0001842;gene_id=HG002_chrY_G0000625;Parent=HG002_chrY_T0001842;transcript_name=HG002_chrY_T0001842;gene_name=OFD1P9Y;ID=exon:HG002_chrY_T0001842:4;Name=OFD1P9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23444374	23444746	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG002_chrY_T0001842;gene_id=HG002_chrY_G0000625;Parent=HG002_chrY_T0001842;transcript_name=HG002_chrY_T0001842;gene_name=OFD1P9Y;ID=intron:HG002_chrY_T0001842:4;Name=OFD1P9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23444747	23445362	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG002_chrY_T0001842;gene_id=HG002_chrY_G0000625;Parent=HG002_chrY_T0001842;transcript_name=HG002_chrY_T0001842;gene_name=OFD1P9Y;ID=exon:HG002_chrY_T0001842:5;Name=OFD1P9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23445363	23447079	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG002_chrY_T0001842;gene_id=HG002_chrY_G0000625;Parent=HG002_chrY_T0001842;transcript_name=HG002_chrY_T0001842;gene_name=OFD1P9Y;ID=intron:HG002_chrY_T0001842:5;Name=OFD1P9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23447080	23447189	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG002_chrY_T0001842;gene_id=HG002_chrY_G0000625;Parent=HG002_chrY_T0001842;transcript_name=HG002_chrY_T0001842;gene_name=OFD1P9Y;ID=exon:HG002_chrY_T0001842:6;Name=OFD1P9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23447190	23447723	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG002_chrY_T0001842;gene_id=HG002_chrY_G0000625;Parent=HG002_chrY_T0001842;transcript_name=HG002_chrY_T0001842;gene_name=OFD1P9Y;ID=intron:HG002_chrY_T0001842:6;Name=OFD1P9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23447724	23447853	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG002_chrY_T0001842;gene_id=HG002_chrY_G0000625;Parent=HG002_chrY_T0001842;transcript_name=HG002_chrY_T0001842;gene_name=OFD1P9Y;ID=exon:HG002_chrY_T0001842:7;Name=OFD1P9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23447854	23449363	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG002_chrY_T0001842;gene_id=HG002_chrY_G0000625;Parent=HG002_chrY_T0001842;transcript_name=HG002_chrY_T0001842;gene_name=OFD1P9Y;ID=intron:HG002_chrY_T0001842:7;Name=OFD1P9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23449364	23449470	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG002_chrY_T0001842;gene_id=HG002_chrY_G0000625;Parent=HG002_chrY_T0001842;transcript_name=HG002_chrY_T0001842;gene_name=OFD1P9Y;ID=exon:HG002_chrY_T0001842:8;Name=OFD1P9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23470972	23476429	.	+	.	source_gene_common_name=ENSG00000299625;source_gene=ENSG00000299625.1;gene_id=HG002_chrY_G0000626;gene_biotype=lncRNA;gene_name=ENSG00000299625;gene_sources=liftoff;ID=HG002_chrY_G0000626;Name=ENSG00000299625
HG002_chrY	CAT	transcript	23470972	23476423	1000	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001843;gene_id=HG002_chrY_G0000626;Parent=HG002_chrY_G0000626;transcript_name=HG002_chrY_T0001843;gene_name=ENSG00000299625;ID=HG002_chrY_T0001843;Name=ENSG00000299625
HG002_chrY	CAT	exon	23470972	23471311	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001843;gene_id=HG002_chrY_G0000626;Parent=HG002_chrY_T0001843;transcript_name=HG002_chrY_T0001843;gene_name=ENSG00000299625;ID=exon:HG002_chrY_T0001843:0;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23471312	23475232	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001843;gene_id=HG002_chrY_G0000626;Parent=HG002_chrY_T0001843;transcript_name=HG002_chrY_T0001843;gene_name=ENSG00000299625;ID=intron:HG002_chrY_T0001843:0;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23475233	23475359	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001843;gene_id=HG002_chrY_G0000626;Parent=HG002_chrY_T0001843;transcript_name=HG002_chrY_T0001843;gene_name=ENSG00000299625;ID=exon:HG002_chrY_T0001843:1;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23475360	23475723	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001843;gene_id=HG002_chrY_G0000626;Parent=HG002_chrY_T0001843;transcript_name=HG002_chrY_T0001843;gene_name=ENSG00000299625;ID=intron:HG002_chrY_T0001843:1;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23475724	23476423	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001843;gene_id=HG002_chrY_G0000626;Parent=HG002_chrY_T0001843;transcript_name=HG002_chrY_T0001843;gene_name=ENSG00000299625;ID=exon:HG002_chrY_T0001843:2;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	23470973	23476429	1000	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001844;gene_id=HG002_chrY_G0000626;Parent=HG002_chrY_G0000626;transcript_name=HG002_chrY_T0001844;gene_name=ENSG00000299625;ID=HG002_chrY_T0001844;Name=ENSG00000299625
HG002_chrY	CAT	exon	23470973	23471311	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001844;gene_id=HG002_chrY_G0000626;Parent=HG002_chrY_T0001844;transcript_name=HG002_chrY_T0001844;gene_name=ENSG00000299625;ID=exon:HG002_chrY_T0001844:0;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23471312	23473229	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001844;gene_id=HG002_chrY_G0000626;Parent=HG002_chrY_T0001844;transcript_name=HG002_chrY_T0001844;gene_name=ENSG00000299625;ID=intron:HG002_chrY_T0001844:0;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23473230	23473363	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001844;gene_id=HG002_chrY_G0000626;Parent=HG002_chrY_T0001844;transcript_name=HG002_chrY_T0001844;gene_name=ENSG00000299625;ID=exon:HG002_chrY_T0001844:1;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23473364	23475232	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001844;gene_id=HG002_chrY_G0000626;Parent=HG002_chrY_T0001844;transcript_name=HG002_chrY_T0001844;gene_name=ENSG00000299625;ID=intron:HG002_chrY_T0001844:1;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23475233	23475359	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001844;gene_id=HG002_chrY_G0000626;Parent=HG002_chrY_T0001844;transcript_name=HG002_chrY_T0001844;gene_name=ENSG00000299625;ID=exon:HG002_chrY_T0001844:2;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23475360	23475723	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001844;gene_id=HG002_chrY_G0000626;Parent=HG002_chrY_T0001844;transcript_name=HG002_chrY_T0001844;gene_name=ENSG00000299625;ID=intron:HG002_chrY_T0001844:2;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23475724	23476429	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001844;gene_id=HG002_chrY_G0000626;Parent=HG002_chrY_T0001844;transcript_name=HG002_chrY_T0001844;gene_name=ENSG00000299625;ID=exon:HG002_chrY_T0001844:3;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23481432	23481728	.	-	.	source_gene_common_name=ENSG00000273589;source_gene=ENSG00000273589.1;alternative_source_transcripts=ENST00000612840.1;gene_id=HG002_chrY_G0000627;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000273589;gene_sources=liftoff;ID=HG002_chrY_G0000627;Name=ENSG00000273589
HG002_chrY	CAT	transcript	23481432	23481728	1000	-	.	source_transcript=ENST00000612840.1;source_transcript_name=ENST00000612840;source_gene=ENSG00000273589.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000273589.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000612840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000612840.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273589;alternative_source_transcripts=ENST00000612840.1;transcript_id=HG002_chrY_T0001845;gene_id=HG002_chrY_G0000627;Parent=HG002_chrY_G0000627;transcript_name=HG002_chrY_T0001845;gene_name=ENSG00000273589;ID=HG002_chrY_T0001845;Name=ENSG00000273589
HG002_chrY	CAT	exon	23481432	23481728	.	-	.	source_transcript=ENST00000612840.1;source_transcript_name=ENST00000612840;source_gene=ENSG00000273589.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000273589.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000612840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000612840.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273589;alternative_source_transcripts=ENST00000612840.1;transcript_id=HG002_chrY_T0001845;gene_id=HG002_chrY_G0000627;Parent=HG002_chrY_T0001845;transcript_name=HG002_chrY_T0001845;gene_name=ENSG00000273589;ID=exon:HG002_chrY_T0001845:0;Name=ENSG00000273589;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23482640	23491123	.	+	.	source_gene_common_name=ENSG00000290348;source_gene=ENSG00000290348.2;gene_id=HG002_chrY_G0000628;gene_biotype=lncRNA;gene_name=ENSG00000290348;gene_sources=liftoff;ID=HG002_chrY_G0000628;Name=ENSG00000290348
HG002_chrY	CAT	transcript	23482640	23491123	1000	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG002_chrY_T0001846;gene_id=HG002_chrY_G0000628;Parent=HG002_chrY_G0000628;transcript_name=HG002_chrY_T0001846;gene_name=ENSG00000290348;ID=HG002_chrY_T0001846;Name=ENSG00000290348
HG002_chrY	CAT	exon	23482640	23482793	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG002_chrY_T0001846;gene_id=HG002_chrY_G0000628;Parent=HG002_chrY_T0001846;transcript_name=HG002_chrY_T0001846;gene_name=ENSG00000290348;ID=exon:HG002_chrY_T0001846:0;Name=ENSG00000290348;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23482794	23483547	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG002_chrY_T0001846;gene_id=HG002_chrY_G0000628;Parent=HG002_chrY_T0001846;transcript_name=HG002_chrY_T0001846;gene_name=ENSG00000290348;ID=intron:HG002_chrY_T0001846:0;Name=ENSG00000290348;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23483548	23483627	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG002_chrY_T0001846;gene_id=HG002_chrY_G0000628;Parent=HG002_chrY_T0001846;transcript_name=HG002_chrY_T0001846;gene_name=ENSG00000290348;ID=exon:HG002_chrY_T0001846:1;Name=ENSG00000290348;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23483628	23484641	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG002_chrY_T0001846;gene_id=HG002_chrY_G0000628;Parent=HG002_chrY_T0001846;transcript_name=HG002_chrY_T0001846;gene_name=ENSG00000290348;ID=intron:HG002_chrY_T0001846:1;Name=ENSG00000290348;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23484642	23484754	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG002_chrY_T0001846;gene_id=HG002_chrY_G0000628;Parent=HG002_chrY_T0001846;transcript_name=HG002_chrY_T0001846;gene_name=ENSG00000290348;ID=exon:HG002_chrY_T0001846:2;Name=ENSG00000290348;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23484755	23485207	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG002_chrY_T0001846;gene_id=HG002_chrY_G0000628;Parent=HG002_chrY_T0001846;transcript_name=HG002_chrY_T0001846;gene_name=ENSG00000290348;ID=intron:HG002_chrY_T0001846:2;Name=ENSG00000290348;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23485208	23485311	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG002_chrY_T0001846;gene_id=HG002_chrY_G0000628;Parent=HG002_chrY_T0001846;transcript_name=HG002_chrY_T0001846;gene_name=ENSG00000290348;ID=exon:HG002_chrY_T0001846:3;Name=ENSG00000290348;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23485312	23488019	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG002_chrY_T0001846;gene_id=HG002_chrY_G0000628;Parent=HG002_chrY_T0001846;transcript_name=HG002_chrY_T0001846;gene_name=ENSG00000290348;ID=intron:HG002_chrY_T0001846:3;Name=ENSG00000290348;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23488020	23488197	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG002_chrY_T0001846;gene_id=HG002_chrY_G0000628;Parent=HG002_chrY_T0001846;transcript_name=HG002_chrY_T0001846;gene_name=ENSG00000290348;ID=exon:HG002_chrY_T0001846:4;Name=ENSG00000290348;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23488198	23490132	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG002_chrY_T0001846;gene_id=HG002_chrY_G0000628;Parent=HG002_chrY_T0001846;transcript_name=HG002_chrY_T0001846;gene_name=ENSG00000290348;ID=intron:HG002_chrY_T0001846:4;Name=ENSG00000290348;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23490133	23490285	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG002_chrY_T0001846;gene_id=HG002_chrY_G0000628;Parent=HG002_chrY_T0001846;transcript_name=HG002_chrY_T0001846;gene_name=ENSG00000290348;ID=exon:HG002_chrY_T0001846:5;Name=ENSG00000290348;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23490286	23490863	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG002_chrY_T0001846;gene_id=HG002_chrY_G0000628;Parent=HG002_chrY_T0001846;transcript_name=HG002_chrY_T0001846;gene_name=ENSG00000290348;ID=intron:HG002_chrY_T0001846:5;Name=ENSG00000290348;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23490864	23491123	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG002_chrY_T0001846;gene_id=HG002_chrY_G0000628;Parent=HG002_chrY_T0001846;transcript_name=HG002_chrY_T0001846;gene_name=ENSG00000290348;ID=exon:HG002_chrY_T0001846:6;Name=ENSG00000290348;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	23482672	23491123	1000	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG002_chrY_T0001847;gene_id=HG002_chrY_G0000628;Parent=HG002_chrY_G0000628;transcript_name=HG002_chrY_T0001847;gene_name=ENSG00000290348;ID=HG002_chrY_T0001847;Name=ENSG00000290348
HG002_chrY	CAT	exon	23482672	23482793	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG002_chrY_T0001847;gene_id=HG002_chrY_G0000628;Parent=HG002_chrY_T0001847;transcript_name=HG002_chrY_T0001847;gene_name=ENSG00000290348;ID=exon:HG002_chrY_T0001847:0;Name=ENSG00000290348;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23482794	23483444	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG002_chrY_T0001847;gene_id=HG002_chrY_G0000628;Parent=HG002_chrY_T0001847;transcript_name=HG002_chrY_T0001847;gene_name=ENSG00000290348;ID=intron:HG002_chrY_T0001847:0;Name=ENSG00000290348;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23483445	23483627	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG002_chrY_T0001847;gene_id=HG002_chrY_G0000628;Parent=HG002_chrY_T0001847;transcript_name=HG002_chrY_T0001847;gene_name=ENSG00000290348;ID=exon:HG002_chrY_T0001847:1;Name=ENSG00000290348;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23483628	23484641	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG002_chrY_T0001847;gene_id=HG002_chrY_G0000628;Parent=HG002_chrY_T0001847;transcript_name=HG002_chrY_T0001847;gene_name=ENSG00000290348;ID=intron:HG002_chrY_T0001847:1;Name=ENSG00000290348;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23484642	23484754	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG002_chrY_T0001847;gene_id=HG002_chrY_G0000628;Parent=HG002_chrY_T0001847;transcript_name=HG002_chrY_T0001847;gene_name=ENSG00000290348;ID=exon:HG002_chrY_T0001847:2;Name=ENSG00000290348;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23484755	23485207	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG002_chrY_T0001847;gene_id=HG002_chrY_G0000628;Parent=HG002_chrY_T0001847;transcript_name=HG002_chrY_T0001847;gene_name=ENSG00000290348;ID=intron:HG002_chrY_T0001847:2;Name=ENSG00000290348;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23485208	23485311	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG002_chrY_T0001847;gene_id=HG002_chrY_G0000628;Parent=HG002_chrY_T0001847;transcript_name=HG002_chrY_T0001847;gene_name=ENSG00000290348;ID=exon:HG002_chrY_T0001847:3;Name=ENSG00000290348;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23485312	23488019	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG002_chrY_T0001847;gene_id=HG002_chrY_G0000628;Parent=HG002_chrY_T0001847;transcript_name=HG002_chrY_T0001847;gene_name=ENSG00000290348;ID=intron:HG002_chrY_T0001847:3;Name=ENSG00000290348;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23488020	23488197	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG002_chrY_T0001847;gene_id=HG002_chrY_G0000628;Parent=HG002_chrY_T0001847;transcript_name=HG002_chrY_T0001847;gene_name=ENSG00000290348;ID=exon:HG002_chrY_T0001847:4;Name=ENSG00000290348;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23488198	23490132	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG002_chrY_T0001847;gene_id=HG002_chrY_G0000628;Parent=HG002_chrY_T0001847;transcript_name=HG002_chrY_T0001847;gene_name=ENSG00000290348;ID=intron:HG002_chrY_T0001847:4;Name=ENSG00000290348;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23490133	23490285	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG002_chrY_T0001847;gene_id=HG002_chrY_G0000628;Parent=HG002_chrY_T0001847;transcript_name=HG002_chrY_T0001847;gene_name=ENSG00000290348;ID=exon:HG002_chrY_T0001847:5;Name=ENSG00000290348;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23490286	23490863	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG002_chrY_T0001847;gene_id=HG002_chrY_G0000628;Parent=HG002_chrY_T0001847;transcript_name=HG002_chrY_T0001847;gene_name=ENSG00000290348;ID=intron:HG002_chrY_T0001847:5;Name=ENSG00000290348;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23490864	23491123	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG002_chrY_T0001847;gene_id=HG002_chrY_G0000628;Parent=HG002_chrY_T0001847;transcript_name=HG002_chrY_T0001847;gene_name=ENSG00000290348;ID=exon:HG002_chrY_T0001847:6;Name=ENSG00000290348;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23484646	23494279	.	+	.	source_gene_common_name=RBMY2BP;source_gene=ENSG00000224657.10;gene_id=HG002_chrY_G0000629;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2BP;gene_sources=liftoff;ID=HG002_chrY_G0000629;Name=RBMY2BP
HG002_chrY	CAT	transcript	23484646	23494279	1000	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=HG002_chrY_T0001848;gene_id=HG002_chrY_G0000629;Parent=HG002_chrY_G0000629;transcript_name=HG002_chrY_T0001848;gene_name=RBMY2BP;ID=HG002_chrY_T0001848;Name=RBMY2BP
HG002_chrY	CAT	exon	23484646	23484754	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=HG002_chrY_T0001848;gene_id=HG002_chrY_G0000629;Parent=HG002_chrY_T0001848;transcript_name=HG002_chrY_T0001848;gene_name=RBMY2BP;ID=exon:HG002_chrY_T0001848:0;Name=RBMY2BP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23484755	23485207	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=HG002_chrY_T0001848;gene_id=HG002_chrY_G0000629;Parent=HG002_chrY_T0001848;transcript_name=HG002_chrY_T0001848;gene_name=RBMY2BP;ID=intron:HG002_chrY_T0001848:0;Name=RBMY2BP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23485208	23485311	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=HG002_chrY_T0001848;gene_id=HG002_chrY_G0000629;Parent=HG002_chrY_T0001848;transcript_name=HG002_chrY_T0001848;gene_name=RBMY2BP;ID=exon:HG002_chrY_T0001848:1;Name=RBMY2BP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23485312	23488019	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=HG002_chrY_T0001848;gene_id=HG002_chrY_G0000629;Parent=HG002_chrY_T0001848;transcript_name=HG002_chrY_T0001848;gene_name=RBMY2BP;ID=intron:HG002_chrY_T0001848:1;Name=RBMY2BP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23488020	23488197	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=HG002_chrY_T0001848;gene_id=HG002_chrY_G0000629;Parent=HG002_chrY_T0001848;transcript_name=HG002_chrY_T0001848;gene_name=RBMY2BP;ID=exon:HG002_chrY_T0001848:2;Name=RBMY2BP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23488198	23490132	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=HG002_chrY_T0001848;gene_id=HG002_chrY_G0000629;Parent=HG002_chrY_T0001848;transcript_name=HG002_chrY_T0001848;gene_name=RBMY2BP;ID=intron:HG002_chrY_T0001848:2;Name=RBMY2BP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23490133	23490285	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=HG002_chrY_T0001848;gene_id=HG002_chrY_G0000629;Parent=HG002_chrY_T0001848;transcript_name=HG002_chrY_T0001848;gene_name=RBMY2BP;ID=exon:HG002_chrY_T0001848:3;Name=RBMY2BP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23490286	23492292	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=HG002_chrY_T0001848;gene_id=HG002_chrY_G0000629;Parent=HG002_chrY_T0001848;transcript_name=HG002_chrY_T0001848;gene_name=RBMY2BP;ID=intron:HG002_chrY_T0001848:3;Name=RBMY2BP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23492293	23492407	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=HG002_chrY_T0001848;gene_id=HG002_chrY_G0000629;Parent=HG002_chrY_T0001848;transcript_name=HG002_chrY_T0001848;gene_name=RBMY2BP;ID=exon:HG002_chrY_T0001848:4;Name=RBMY2BP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23492408	23493276	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=HG002_chrY_T0001848;gene_id=HG002_chrY_G0000629;Parent=HG002_chrY_T0001848;transcript_name=HG002_chrY_T0001848;gene_name=RBMY2BP;ID=intron:HG002_chrY_T0001848:4;Name=RBMY2BP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23493277	23493387	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=HG002_chrY_T0001848;gene_id=HG002_chrY_G0000629;Parent=HG002_chrY_T0001848;transcript_name=HG002_chrY_T0001848;gene_name=RBMY2BP;ID=exon:HG002_chrY_T0001848:5;Name=RBMY2BP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23493388	23493469	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=HG002_chrY_T0001848;gene_id=HG002_chrY_G0000629;Parent=HG002_chrY_T0001848;transcript_name=HG002_chrY_T0001848;gene_name=RBMY2BP;ID=intron:HG002_chrY_T0001848:5;Name=RBMY2BP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23493470	23493557	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=HG002_chrY_T0001848;gene_id=HG002_chrY_G0000629;Parent=HG002_chrY_T0001848;transcript_name=HG002_chrY_T0001848;gene_name=RBMY2BP;ID=exon:HG002_chrY_T0001848:6;Name=RBMY2BP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23493558	23493981	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=HG002_chrY_T0001848;gene_id=HG002_chrY_G0000629;Parent=HG002_chrY_T0001848;transcript_name=HG002_chrY_T0001848;gene_name=RBMY2BP;ID=intron:HG002_chrY_T0001848:6;Name=RBMY2BP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23493982	23494279	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=HG002_chrY_T0001848;gene_id=HG002_chrY_G0000629;Parent=HG002_chrY_T0001848;transcript_name=HG002_chrY_T0001848;gene_name=RBMY2BP;ID=exon:HG002_chrY_T0001848:7;Name=RBMY2BP;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23506025	23508268	.	-	.	source_gene_common_name=ENSG00000224917;source_gene=ENSG00000224917.1;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;gene_id=HG002_chrY_G0000630;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000224917;gene_sources=liftoff;ID=HG002_chrY_G0000630;Name=ENSG00000224917
HG002_chrY	CAT	transcript	23506025	23508268	1000	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=HG002_chrY_T0001849;gene_id=HG002_chrY_G0000630;Parent=HG002_chrY_G0000630;transcript_name=HG002_chrY_T0001849;gene_name=ENSG00000224917;ID=HG002_chrY_T0001849;Name=ENSG00000224917
HG002_chrY	CAT	exon	23506025	23506098	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=HG002_chrY_T0001849;gene_id=HG002_chrY_G0000630;Parent=HG002_chrY_T0001849;transcript_name=HG002_chrY_T0001849;gene_name=ENSG00000224917;ID=exon:HG002_chrY_T0001849:0;Name=ENSG00000224917;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23506099	23506219	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=HG002_chrY_T0001849;gene_id=HG002_chrY_G0000630;Parent=HG002_chrY_T0001849;transcript_name=HG002_chrY_T0001849;gene_name=ENSG00000224917;ID=intron:HG002_chrY_T0001849:0;Name=ENSG00000224917;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23506220	23506279	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=HG002_chrY_T0001849;gene_id=HG002_chrY_G0000630;Parent=HG002_chrY_T0001849;transcript_name=HG002_chrY_T0001849;gene_name=ENSG00000224917;ID=exon:HG002_chrY_T0001849:1;Name=ENSG00000224917;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23506280	23506455	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=HG002_chrY_T0001849;gene_id=HG002_chrY_G0000630;Parent=HG002_chrY_T0001849;transcript_name=HG002_chrY_T0001849;gene_name=ENSG00000224917;ID=intron:HG002_chrY_T0001849:1;Name=ENSG00000224917;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23506456	23506564	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=HG002_chrY_T0001849;gene_id=HG002_chrY_G0000630;Parent=HG002_chrY_T0001849;transcript_name=HG002_chrY_T0001849;gene_name=ENSG00000224917;ID=exon:HG002_chrY_T0001849:2;Name=ENSG00000224917;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23506565	23506779	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=HG002_chrY_T0001849;gene_id=HG002_chrY_G0000630;Parent=HG002_chrY_T0001849;transcript_name=HG002_chrY_T0001849;gene_name=ENSG00000224917;ID=intron:HG002_chrY_T0001849:2;Name=ENSG00000224917;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23506780	23506834	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=HG002_chrY_T0001849;gene_id=HG002_chrY_G0000630;Parent=HG002_chrY_T0001849;transcript_name=HG002_chrY_T0001849;gene_name=ENSG00000224917;ID=exon:HG002_chrY_T0001849:3;Name=ENSG00000224917;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23506835	23507866	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=HG002_chrY_T0001849;gene_id=HG002_chrY_G0000630;Parent=HG002_chrY_T0001849;transcript_name=HG002_chrY_T0001849;gene_name=ENSG00000224917;ID=intron:HG002_chrY_T0001849:3;Name=ENSG00000224917;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23507867	23508268	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=HG002_chrY_T0001849;gene_id=HG002_chrY_G0000630;Parent=HG002_chrY_T0001849;transcript_name=HG002_chrY_T0001849;gene_name=ENSG00000224917;ID=exon:HG002_chrY_T0001849:4;Name=ENSG00000224917;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23529349	23607563	.	-	.	source_gene_common_name=ENSG00000306918;source_gene=ENSG00000306918.1;gene_id=HG002_chrY_G0000631;gene_biotype=lncRNA;gene_name=ENSG00000306918;gene_sources=liftoff;ID=HG002_chrY_G0000631;Name=ENSG00000306918
HG002_chrY	CAT	transcript	23529349	23607547	1000	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG002_chrY_T0001850;gene_id=HG002_chrY_G0000631;Parent=HG002_chrY_G0000631;transcript_name=HG002_chrY_T0001850;gene_name=ENSG00000306918;ID=HG002_chrY_T0001850;Name=ENSG00000306918
HG002_chrY	CAT	exon	23529349	23529631	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG002_chrY_T0001850;gene_id=HG002_chrY_G0000631;Parent=HG002_chrY_T0001850;transcript_name=HG002_chrY_T0001850;gene_name=ENSG00000306918;ID=exon:HG002_chrY_T0001850:0;Name=ENSG00000306918;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23529632	23531249	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG002_chrY_T0001850;gene_id=HG002_chrY_G0000631;Parent=HG002_chrY_T0001850;transcript_name=HG002_chrY_T0001850;gene_name=ENSG00000306918;ID=intron:HG002_chrY_T0001850:0;Name=ENSG00000306918;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23531250	23531293	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG002_chrY_T0001850;gene_id=HG002_chrY_G0000631;Parent=HG002_chrY_T0001850;transcript_name=HG002_chrY_T0001850;gene_name=ENSG00000306918;ID=exon:HG002_chrY_T0001850:1;Name=ENSG00000306918;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23531294	23595719	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG002_chrY_T0001850;gene_id=HG002_chrY_G0000631;Parent=HG002_chrY_T0001850;transcript_name=HG002_chrY_T0001850;gene_name=ENSG00000306918;ID=intron:HG002_chrY_T0001850:1;Name=ENSG00000306918;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23595720	23595827	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG002_chrY_T0001850;gene_id=HG002_chrY_G0000631;Parent=HG002_chrY_T0001850;transcript_name=HG002_chrY_T0001850;gene_name=ENSG00000306918;ID=exon:HG002_chrY_T0001850:2;Name=ENSG00000306918;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23595828	23598975	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG002_chrY_T0001850;gene_id=HG002_chrY_G0000631;Parent=HG002_chrY_T0001850;transcript_name=HG002_chrY_T0001850;gene_name=ENSG00000306918;ID=intron:HG002_chrY_T0001850:2;Name=ENSG00000306918;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23598976	23599064	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG002_chrY_T0001850;gene_id=HG002_chrY_G0000631;Parent=HG002_chrY_T0001850;transcript_name=HG002_chrY_T0001850;gene_name=ENSG00000306918;ID=exon:HG002_chrY_T0001850:3;Name=ENSG00000306918;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23599065	23607448	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG002_chrY_T0001850;gene_id=HG002_chrY_G0000631;Parent=HG002_chrY_T0001850;transcript_name=HG002_chrY_T0001850;gene_name=ENSG00000306918;ID=intron:HG002_chrY_T0001850:3;Name=ENSG00000306918;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23607449	23607547	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG002_chrY_T0001850;gene_id=HG002_chrY_G0000631;Parent=HG002_chrY_T0001850;transcript_name=HG002_chrY_T0001850;gene_name=ENSG00000306918;ID=exon:HG002_chrY_T0001850:4;Name=ENSG00000306918;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	23564535	23607563	1000	-	.	source_transcript=ENST00000821994.1;source_transcript_name=ENST00000821994;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821994.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG002_chrY_T0001851;gene_id=HG002_chrY_G0000631;Parent=HG002_chrY_G0000631;transcript_name=HG002_chrY_T0001851;gene_name=ENSG00000306918;ID=HG002_chrY_T0001851;Name=ENSG00000306918
HG002_chrY	CAT	exon	23564535	23564931	.	-	.	source_transcript=ENST00000821994.1;source_transcript_name=ENST00000821994;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG002_chrY_T0001851;gene_id=HG002_chrY_G0000631;Parent=HG002_chrY_T0001851;transcript_name=HG002_chrY_T0001851;gene_name=ENSG00000306918;ID=exon:HG002_chrY_T0001851:0;Name=ENSG00000306918;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23564932	23595719	.	-	.	source_transcript=ENST00000821994.1;source_transcript_name=ENST00000821994;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG002_chrY_T0001851;gene_id=HG002_chrY_G0000631;Parent=HG002_chrY_T0001851;transcript_name=HG002_chrY_T0001851;gene_name=ENSG00000306918;ID=intron:HG002_chrY_T0001851:0;Name=ENSG00000306918;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23595720	23595827	.	-	.	source_transcript=ENST00000821994.1;source_transcript_name=ENST00000821994;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG002_chrY_T0001851;gene_id=HG002_chrY_G0000631;Parent=HG002_chrY_T0001851;transcript_name=HG002_chrY_T0001851;gene_name=ENSG00000306918;ID=exon:HG002_chrY_T0001851:1;Name=ENSG00000306918;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23595828	23607448	.	-	.	source_transcript=ENST00000821994.1;source_transcript_name=ENST00000821994;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG002_chrY_T0001851;gene_id=HG002_chrY_G0000631;Parent=HG002_chrY_T0001851;transcript_name=HG002_chrY_T0001851;gene_name=ENSG00000306918;ID=intron:HG002_chrY_T0001851:1;Name=ENSG00000306918;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23607449	23607563	.	-	.	source_transcript=ENST00000821994.1;source_transcript_name=ENST00000821994;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG002_chrY_T0001851;gene_id=HG002_chrY_G0000631;Parent=HG002_chrY_T0001851;transcript_name=HG002_chrY_T0001851;gene_name=ENSG00000306918;ID=exon:HG002_chrY_T0001851:2;Name=ENSG00000306918;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	23564535	23607545	1000	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG002_chrY_T0001852;gene_id=HG002_chrY_G0000631;Parent=HG002_chrY_G0000631;transcript_name=HG002_chrY_T0001852;gene_name=ENSG00000306918;ID=HG002_chrY_T0001852;Name=ENSG00000306918
HG002_chrY	CAT	exon	23564535	23564931	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG002_chrY_T0001852;gene_id=HG002_chrY_G0000631;Parent=HG002_chrY_T0001852;transcript_name=HG002_chrY_T0001852;gene_name=ENSG00000306918;ID=exon:HG002_chrY_T0001852:0;Name=ENSG00000306918;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23564932	23595719	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG002_chrY_T0001852;gene_id=HG002_chrY_G0000631;Parent=HG002_chrY_T0001852;transcript_name=HG002_chrY_T0001852;gene_name=ENSG00000306918;ID=intron:HG002_chrY_T0001852:0;Name=ENSG00000306918;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23595720	23595827	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG002_chrY_T0001852;gene_id=HG002_chrY_G0000631;Parent=HG002_chrY_T0001852;transcript_name=HG002_chrY_T0001852;gene_name=ENSG00000306918;ID=exon:HG002_chrY_T0001852:1;Name=ENSG00000306918;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23595828	23598975	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG002_chrY_T0001852;gene_id=HG002_chrY_G0000631;Parent=HG002_chrY_T0001852;transcript_name=HG002_chrY_T0001852;gene_name=ENSG00000306918;ID=intron:HG002_chrY_T0001852:1;Name=ENSG00000306918;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23598976	23599064	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG002_chrY_T0001852;gene_id=HG002_chrY_G0000631;Parent=HG002_chrY_T0001852;transcript_name=HG002_chrY_T0001852;gene_name=ENSG00000306918;ID=exon:HG002_chrY_T0001852:2;Name=ENSG00000306918;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23599065	23607448	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG002_chrY_T0001852;gene_id=HG002_chrY_G0000631;Parent=HG002_chrY_T0001852;transcript_name=HG002_chrY_T0001852;gene_name=ENSG00000306918;ID=intron:HG002_chrY_T0001852:2;Name=ENSG00000306918;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23607449	23607545	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG002_chrY_T0001852;gene_id=HG002_chrY_G0000631;Parent=HG002_chrY_T0001852;transcript_name=HG002_chrY_T0001852;gene_name=ENSG00000306918;ID=exon:HG002_chrY_T0001852:3;Name=ENSG00000306918;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23598261	23605207	.	-	.	source_gene_common_name=RBMY2WP;source_gene=ENSG00000230727.1;gene_id=HG002_chrY_G0000632;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2WP;gene_sources=liftoff;ID=HG002_chrY_G0000632;Name=RBMY2WP
HG002_chrY	CAT	transcript	23598261	23605207	1000	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG002_chrY_T0001853;gene_id=HG002_chrY_G0000632;Parent=HG002_chrY_G0000632;transcript_name=HG002_chrY_T0001853;gene_name=RBMY2WP;ID=HG002_chrY_T0001853;Name=RBMY2WP
HG002_chrY	CAT	exon	23598261	23598562	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG002_chrY_T0001853;gene_id=HG002_chrY_G0000632;Parent=HG002_chrY_T0001853;transcript_name=HG002_chrY_T0001853;gene_name=RBMY2WP;ID=exon:HG002_chrY_T0001853:0;Name=RBMY2WP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23598563	23598975	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG002_chrY_T0001853;gene_id=HG002_chrY_G0000632;Parent=HG002_chrY_T0001853;transcript_name=HG002_chrY_T0001853;gene_name=RBMY2WP;ID=intron:HG002_chrY_T0001853:0;Name=RBMY2WP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23598976	23599064	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG002_chrY_T0001853;gene_id=HG002_chrY_G0000632;Parent=HG002_chrY_T0001853;transcript_name=HG002_chrY_T0001853;gene_name=RBMY2WP;ID=exon:HG002_chrY_T0001853:1;Name=RBMY2WP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23599065	23599145	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG002_chrY_T0001853;gene_id=HG002_chrY_G0000632;Parent=HG002_chrY_T0001853;transcript_name=HG002_chrY_T0001853;gene_name=RBMY2WP;ID=intron:HG002_chrY_T0001853:1;Name=RBMY2WP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23599146	23599256	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG002_chrY_T0001853;gene_id=HG002_chrY_G0000632;Parent=HG002_chrY_T0001853;transcript_name=HG002_chrY_T0001853;gene_name=RBMY2WP;ID=exon:HG002_chrY_T0001853:2;Name=RBMY2WP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23599257	23602013	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG002_chrY_T0001853;gene_id=HG002_chrY_G0000632;Parent=HG002_chrY_T0001853;transcript_name=HG002_chrY_T0001853;gene_name=RBMY2WP;ID=intron:HG002_chrY_T0001853:2;Name=RBMY2WP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23602014	23602190	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG002_chrY_T0001853;gene_id=HG002_chrY_G0000632;Parent=HG002_chrY_T0001853;transcript_name=HG002_chrY_T0001853;gene_name=RBMY2WP;ID=exon:HG002_chrY_T0001853:3;Name=RBMY2WP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23602191	23604578	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG002_chrY_T0001853;gene_id=HG002_chrY_G0000632;Parent=HG002_chrY_T0001853;transcript_name=HG002_chrY_T0001853;gene_name=RBMY2WP;ID=intron:HG002_chrY_T0001853:3;Name=RBMY2WP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23604579	23604680	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG002_chrY_T0001853;gene_id=HG002_chrY_G0000632;Parent=HG002_chrY_T0001853;transcript_name=HG002_chrY_T0001853;gene_name=RBMY2WP;ID=exon:HG002_chrY_T0001853:4;Name=RBMY2WP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23604681	23605094	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG002_chrY_T0001853;gene_id=HG002_chrY_G0000632;Parent=HG002_chrY_T0001853;transcript_name=HG002_chrY_T0001853;gene_name=RBMY2WP;ID=intron:HG002_chrY_T0001853:4;Name=RBMY2WP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23605095	23605207	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG002_chrY_T0001853;gene_id=HG002_chrY_G0000632;Parent=HG002_chrY_T0001853;transcript_name=HG002_chrY_T0001853;gene_name=RBMY2WP;ID=exon:HG002_chrY_T0001853:5;Name=RBMY2WP;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23652536	23657626	.	-	.	source_gene_common_name=ENSG00000308317;source_gene=ENSG00000308317.1;gene_id=HG002_chrY_G0000633;gene_biotype=lncRNA;gene_name=ENSG00000308317;gene_sources=liftoff;ID=HG002_chrY_G0000633;Name=ENSG00000308317
HG002_chrY	CAT	transcript	23652536	23657626	1000	-	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;transcript_id=HG002_chrY_T0001854;gene_id=HG002_chrY_G0000633;Parent=HG002_chrY_G0000633;transcript_name=HG002_chrY_T0001854;gene_name=ENSG00000308317;ID=HG002_chrY_T0001854;Name=ENSG00000308317
HG002_chrY	CAT	exon	23652536	23652877	.	-	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;transcript_id=HG002_chrY_T0001854;gene_id=HG002_chrY_G0000633;Parent=HG002_chrY_T0001854;transcript_name=HG002_chrY_T0001854;gene_name=ENSG00000308317;ID=exon:HG002_chrY_T0001854:0;Name=ENSG00000308317;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23652878	23657529	.	-	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;transcript_id=HG002_chrY_T0001854;gene_id=HG002_chrY_G0000633;Parent=HG002_chrY_T0001854;transcript_name=HG002_chrY_T0001854;gene_name=ENSG00000308317;ID=intron:HG002_chrY_T0001854:0;Name=ENSG00000308317;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23657530	23657626	.	-	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;transcript_id=HG002_chrY_T0001854;gene_id=HG002_chrY_G0000633;Parent=HG002_chrY_T0001854;transcript_name=HG002_chrY_T0001854;gene_name=ENSG00000308317;ID=exon:HG002_chrY_T0001854:1;Name=ENSG00000308317;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23687017	23688148	.	+	.	source_gene_common_name=TTTY17A;source_gene=ENSG00000228240.1;gene_id=HG002_chrY_G0000634;gene_biotype=lncRNA;gene_name=TTTY17A;gene_sources=liftoff;ID=HG002_chrY_G0000634;Name=TTTY17A
HG002_chrY	CAT	transcript	23687017	23688148	1000	+	.	source_transcript=ENST00000416110.1;source_transcript_name=TTTY17A-201;source_gene=ENSG00000228240.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228240.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000416110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416110.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;transcript_id=HG002_chrY_T0001855;gene_id=HG002_chrY_G0000634;Parent=HG002_chrY_G0000634;transcript_name=HG002_chrY_T0001855;gene_name=TTTY17A;ID=HG002_chrY_T0001855;Name=TTTY17A
HG002_chrY	CAT	exon	23687017	23687076	.	+	.	source_transcript=ENST00000416110.1;source_transcript_name=TTTY17A-201;source_gene=ENSG00000228240.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228240.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000416110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416110.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;transcript_id=HG002_chrY_T0001855;gene_id=HG002_chrY_G0000634;Parent=HG002_chrY_T0001855;transcript_name=HG002_chrY_T0001855;gene_name=TTTY17A;ID=exon:HG002_chrY_T0001855:0;Name=TTTY17A;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23687077	23688042	.	+	.	source_transcript=ENST00000416110.1;source_transcript_name=TTTY17A-201;source_gene=ENSG00000228240.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228240.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000416110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416110.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;transcript_id=HG002_chrY_T0001855;gene_id=HG002_chrY_G0000634;Parent=HG002_chrY_T0001855;transcript_name=HG002_chrY_T0001855;gene_name=TTTY17A;ID=intron:HG002_chrY_T0001855:0;Name=TTTY17A;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23688043	23688148	.	+	.	source_transcript=ENST00000416110.1;source_transcript_name=TTTY17A-201;source_gene=ENSG00000228240.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228240.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000416110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416110.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;transcript_id=HG002_chrY_T0001855;gene_id=HG002_chrY_G0000634;Parent=HG002_chrY_T0001855;transcript_name=HG002_chrY_T0001855;gene_name=TTTY17A;ID=exon:HG002_chrY_T0001855:1;Name=TTTY17A;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23696394	23697268	.	-	.	source_gene_common_name=TRIM60P5Y;source_gene=ENSG00000224210.1;gene_id=HG002_chrY_G0000635;gene_biotype=processed_pseudogene;gene_name=TRIM60P5Y;gene_sources=liftoff;ID=HG002_chrY_G0000635;Name=TRIM60P5Y
HG002_chrY	CAT	transcript	23696394	23697268	1000	-	.	source_transcript=ENST00000413946.1;source_transcript_name=TRIM60P5Y-201;source_gene=ENSG00000224210.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224210.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413946.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P5Y;transcript_id=HG002_chrY_T0001856;gene_id=HG002_chrY_G0000635;Parent=HG002_chrY_G0000635;transcript_name=HG002_chrY_T0001856;gene_name=TRIM60P5Y;ID=HG002_chrY_T0001856;Name=TRIM60P5Y
HG002_chrY	CAT	exon	23696394	23696691	.	-	.	source_transcript=ENST00000413946.1;source_transcript_name=TRIM60P5Y-201;source_gene=ENSG00000224210.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224210.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P5Y;transcript_id=HG002_chrY_T0001856;gene_id=HG002_chrY_G0000635;Parent=HG002_chrY_T0001856;transcript_name=HG002_chrY_T0001856;gene_name=TRIM60P5Y;ID=exon:HG002_chrY_T0001856:0;Name=TRIM60P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23696692	23696992	.	-	.	source_transcript=ENST00000413946.1;source_transcript_name=TRIM60P5Y-201;source_gene=ENSG00000224210.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224210.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P5Y;transcript_id=HG002_chrY_T0001856;gene_id=HG002_chrY_G0000635;Parent=HG002_chrY_T0001856;transcript_name=HG002_chrY_T0001856;gene_name=TRIM60P5Y;ID=intron:HG002_chrY_T0001856:0;Name=TRIM60P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23696993	23697268	.	-	.	source_transcript=ENST00000413946.1;source_transcript_name=TRIM60P5Y-201;source_gene=ENSG00000224210.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224210.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P5Y;transcript_id=HG002_chrY_T0001856;gene_id=HG002_chrY_G0000635;Parent=HG002_chrY_T0001856;transcript_name=HG002_chrY_T0001856;gene_name=TRIM60P5Y;ID=exon:HG002_chrY_T0001856:1;Name=TRIM60P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23701977	23703189	.	-	.	source_gene_common_name=ZNF736P11Y;source_gene=ENSG00000215537.3;alternative_source_transcripts=ENST00000442535.1;gene_id=HG002_chrY_G0000636;gene_biotype=processed_pseudogene;gene_name=ZNF736P11Y;gene_sources=liftoff;ID=HG002_chrY_G0000636;Name=ZNF736P11Y
HG002_chrY	CAT	transcript	23701977	23703189	1000	-	.	source_transcript=ENST00000442535.1;source_transcript_name=ZNF736P11Y-201;source_gene=ENSG00000215537.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215537.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000442535.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442535.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P11Y;alternative_source_transcripts=ENST00000442535.1;transcript_id=HG002_chrY_T0001857;gene_id=HG002_chrY_G0000636;Parent=HG002_chrY_G0000636;transcript_name=HG002_chrY_T0001857;gene_name=ZNF736P11Y;ID=HG002_chrY_T0001857;Name=ZNF736P11Y
HG002_chrY	CAT	exon	23701977	23703189	.	-	.	source_transcript=ENST00000442535.1;source_transcript_name=ZNF736P11Y-201;source_gene=ENSG00000215537.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215537.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000442535.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442535.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P11Y;alternative_source_transcripts=ENST00000442535.1;transcript_id=HG002_chrY_T0001857;gene_id=HG002_chrY_G0000636;Parent=HG002_chrY_T0001857;transcript_name=HG002_chrY_T0001857;gene_name=ZNF736P11Y;ID=exon:HG002_chrY_T0001857:0;Name=ZNF736P11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23771896	23808706	.	+	.	source_gene_common_name=TTTY4;source_gene=ENSG00000226906.1;alternative_source_transcripts=ENST00000436568.1;gene_id=HG002_chrY_G0000637;gene_biotype=lncRNA;gene_name=TTTY4;gene_sources=liftoff;ID=HG002_chrY_G0000637;Name=TTTY4
HG002_chrY	CAT	transcript	23771896	23808706	1000	+	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000436568.1;transcript_id=HG002_chrY_T0001858;gene_id=HG002_chrY_G0000637;Parent=HG002_chrY_G0000637;transcript_name=HG002_chrY_T0001858;gene_name=TTTY4;ID=HG002_chrY_T0001858;Name=TTTY4
HG002_chrY	CAT	exon	23771896	23772056	.	+	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000436568.1;transcript_id=HG002_chrY_T0001858;gene_id=HG002_chrY_G0000637;Parent=HG002_chrY_T0001858;transcript_name=HG002_chrY_T0001858;gene_name=TTTY4;ID=exon:HG002_chrY_T0001858:0;Name=TTTY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23772057	23799067	.	+	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000436568.1;transcript_id=HG002_chrY_T0001858;gene_id=HG002_chrY_G0000637;Parent=HG002_chrY_T0001858;transcript_name=HG002_chrY_T0001858;gene_name=TTTY4;ID=intron:HG002_chrY_T0001858:0;Name=TTTY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23799068	23799143	.	+	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000436568.1;transcript_id=HG002_chrY_T0001858;gene_id=HG002_chrY_G0000637;Parent=HG002_chrY_T0001858;transcript_name=HG002_chrY_T0001858;gene_name=TTTY4;ID=exon:HG002_chrY_T0001858:1;Name=TTTY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23799144	23800947	.	+	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000436568.1;transcript_id=HG002_chrY_T0001858;gene_id=HG002_chrY_G0000637;Parent=HG002_chrY_T0001858;transcript_name=HG002_chrY_T0001858;gene_name=TTTY4;ID=intron:HG002_chrY_T0001858:1;Name=TTTY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23800948	23801055	.	+	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000436568.1;transcript_id=HG002_chrY_T0001858;gene_id=HG002_chrY_G0000637;Parent=HG002_chrY_T0001858;transcript_name=HG002_chrY_T0001858;gene_name=TTTY4;ID=exon:HG002_chrY_T0001858:2;Name=TTTY4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23801056	23807705	.	+	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000436568.1;transcript_id=HG002_chrY_T0001858;gene_id=HG002_chrY_G0000637;Parent=HG002_chrY_T0001858;transcript_name=HG002_chrY_T0001858;gene_name=TTTY4;ID=intron:HG002_chrY_T0001858:2;Name=TTTY4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23807706	23808706	.	+	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000436568.1;transcript_id=HG002_chrY_T0001858;gene_id=HG002_chrY_G0000637;Parent=HG002_chrY_T0001858;transcript_name=HG002_chrY_T0001858;gene_name=TTTY4;ID=exon:HG002_chrY_T0001858:3;Name=TTTY4;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23809241	23840888	.	+	.	source_gene_common_name=BPY2C;source_gene=ENSG00000185894.8;gene_id=HG002_chrY_G0000638;gene_biotype=protein_coding;gene_name=BPY2C;gene_sources=liftoff;ID=HG002_chrY_G0000638;Name=BPY2C
HG002_chrY	CAT	transcript	23809241	23827798	10000	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001859;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_G0000638;transcript_name=HG002_chrY_T0001859;gene_name=BPY2C;ID=HG002_chrY_T0001859;Name=BPY2C
HG002_chrY	CAT	exon	23809241	23809396	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001859;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001859;transcript_name=HG002_chrY_T0001859;gene_name=BPY2C;ID=exon:HG002_chrY_T0001859:0;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23809397	23819569	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001859;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001859;transcript_name=HG002_chrY_T0001859;gene_name=BPY2C;ID=intron:HG002_chrY_T0001859:0;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23819570	23819638	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001859;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001859;transcript_name=HG002_chrY_T0001859;gene_name=BPY2C;ID=exon:HG002_chrY_T0001859:1;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23819639	23819990	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001859;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001859;transcript_name=HG002_chrY_T0001859;gene_name=BPY2C;ID=intron:HG002_chrY_T0001859:1;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23819991	23820113	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001859;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001859;transcript_name=HG002_chrY_T0001859;gene_name=BPY2C;ID=exon:HG002_chrY_T0001859:2;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23820114	23823178	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001859;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001859;transcript_name=HG002_chrY_T0001859;gene_name=BPY2C;ID=intron:HG002_chrY_T0001859:2;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23823179	23823315	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001859;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001859;transcript_name=HG002_chrY_T0001859;gene_name=BPY2C;ID=exon:HG002_chrY_T0001859:3;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23823316	23827724	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001859;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001859;transcript_name=HG002_chrY_T0001859;gene_name=BPY2C;ID=intron:HG002_chrY_T0001859:3;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23827725	23827798	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001859;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001859;transcript_name=HG002_chrY_T0001859;gene_name=BPY2C;ID=exon:HG002_chrY_T0001859:4;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23827766	23827798	.	+	0	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001859;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001859;transcript_name=HG002_chrY_T0001859;gene_name=BPY2C;ID=CDS:HG002_chrY_T0001859:0;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	23827766	23827768	.	+	0	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001859;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001859;transcript_name=HG002_chrY_T0001859;gene_name=BPY2C;ID=start_codon:HG002_chrY_T0001859;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	23827796	23827798	.	+	0	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001859;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001859;transcript_name=HG002_chrY_T0001859;gene_name=BPY2C;ID=stop_codon:HG002_chrY_T0001859;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	23819685	23840888	10000	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001860;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_G0000638;transcript_name=HG002_chrY_T0001860;gene_name=BPY2C;ID=HG002_chrY_T0001860;Name=BPY2C
HG002_chrY	CAT	exon	23819685	23819715	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001860;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001860;transcript_name=HG002_chrY_T0001860;gene_name=BPY2C;ID=exon:HG002_chrY_T0001860:0;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23819716	23819990	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001860;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001860;transcript_name=HG002_chrY_T0001860;gene_name=BPY2C;ID=intron:HG002_chrY_T0001860:0;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23819991	23820113	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001860;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001860;transcript_name=HG002_chrY_T0001860;gene_name=BPY2C;ID=exon:HG002_chrY_T0001860:1;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23820114	23823178	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001860;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001860;transcript_name=HG002_chrY_T0001860;gene_name=BPY2C;ID=intron:HG002_chrY_T0001860:1;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23823179	23823315	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001860;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001860;transcript_name=HG002_chrY_T0001860;gene_name=BPY2C;ID=exon:HG002_chrY_T0001860:2;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23823316	23827724	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001860;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001860;transcript_name=HG002_chrY_T0001860;gene_name=BPY2C;ID=intron:HG002_chrY_T0001860:2;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23827725	23827843	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001860;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001860;transcript_name=HG002_chrY_T0001860;gene_name=BPY2C;ID=exon:HG002_chrY_T0001860:3;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23827766	23827843	.	+	0	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001860;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001860;transcript_name=HG002_chrY_T0001860;gene_name=BPY2C;ID=CDS:HG002_chrY_T0001860:0;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	23827766	23827768	.	+	0	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001860;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001860;transcript_name=HG002_chrY_T0001860;gene_name=BPY2C;ID=start_codon:HG002_chrY_T0001860;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23827844	23829902	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001860;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001860;transcript_name=HG002_chrY_T0001860;gene_name=BPY2C;ID=intron:HG002_chrY_T0001860:3;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23829903	23830020	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001860;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001860;transcript_name=HG002_chrY_T0001860;gene_name=BPY2C;ID=exon:HG002_chrY_T0001860:4;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23829903	23830020	.	+	0	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001860;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001860;transcript_name=HG002_chrY_T0001860;gene_name=BPY2C;ID=CDS:HG002_chrY_T0001860:1;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23830021	23832874	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001860;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001860;transcript_name=HG002_chrY_T0001860;gene_name=BPY2C;ID=intron:HG002_chrY_T0001860:4;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23832875	23832980	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001860;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001860;transcript_name=HG002_chrY_T0001860;gene_name=BPY2C;ID=exon:HG002_chrY_T0001860:5;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23832875	23832980	.	+	2	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001860;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001860;transcript_name=HG002_chrY_T0001860;gene_name=BPY2C;ID=CDS:HG002_chrY_T0001860:2;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23832981	23833672	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001860;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001860;transcript_name=HG002_chrY_T0001860;gene_name=BPY2C;ID=intron:HG002_chrY_T0001860:5;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23833673	23833797	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001860;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001860;transcript_name=HG002_chrY_T0001860;gene_name=BPY2C;ID=exon:HG002_chrY_T0001860:6;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23833673	23833691	.	+	1	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001860;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001860;transcript_name=HG002_chrY_T0001860;gene_name=BPY2C;ID=CDS:HG002_chrY_T0001860:3;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	23833689	23833691	.	+	0	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001860;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001860;transcript_name=HG002_chrY_T0001860;gene_name=BPY2C;ID=stop_codon:HG002_chrY_T0001860;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23833798	23840347	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001860;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001860;transcript_name=HG002_chrY_T0001860;gene_name=BPY2C;ID=intron:HG002_chrY_T0001860:6;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23840348	23840472	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001860;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001860;transcript_name=HG002_chrY_T0001860;gene_name=BPY2C;ID=exon:HG002_chrY_T0001860:7;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23840473	23840566	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001860;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001860;transcript_name=HG002_chrY_T0001860;gene_name=BPY2C;ID=intron:HG002_chrY_T0001860:7;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23840567	23840888	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001860;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001860;transcript_name=HG002_chrY_T0001860;gene_name=BPY2C;ID=exon:HG002_chrY_T0001860:8;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	23819709	23840829	1000	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001861;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_G0000638;transcript_name=HG002_chrY_T0001861;gene_name=BPY2C;ID=HG002_chrY_T0001861;Name=BPY2C
HG002_chrY	CAT	exon	23819709	23819715	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001861;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001861;transcript_name=HG002_chrY_T0001861;gene_name=BPY2C;ID=exon:HG002_chrY_T0001861:0;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23819716	23819990	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001861;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001861;transcript_name=HG002_chrY_T0001861;gene_name=BPY2C;ID=intron:HG002_chrY_T0001861:0;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23819991	23820113	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001861;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001861;transcript_name=HG002_chrY_T0001861;gene_name=BPY2C;ID=exon:HG002_chrY_T0001861:1;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23820114	23823178	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001861;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001861;transcript_name=HG002_chrY_T0001861;gene_name=BPY2C;ID=intron:HG002_chrY_T0001861:1;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23823179	23823315	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001861;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001861;transcript_name=HG002_chrY_T0001861;gene_name=BPY2C;ID=exon:HG002_chrY_T0001861:2;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23823316	23827724	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001861;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001861;transcript_name=HG002_chrY_T0001861;gene_name=BPY2C;ID=intron:HG002_chrY_T0001861:2;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23827725	23827843	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001861;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001861;transcript_name=HG002_chrY_T0001861;gene_name=BPY2C;ID=exon:HG002_chrY_T0001861:3;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23827844	23832874	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001861;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001861;transcript_name=HG002_chrY_T0001861;gene_name=BPY2C;ID=intron:HG002_chrY_T0001861:3;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23832875	23832980	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001861;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001861;transcript_name=HG002_chrY_T0001861;gene_name=BPY2C;ID=exon:HG002_chrY_T0001861:4;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23832981	23833672	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001861;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001861;transcript_name=HG002_chrY_T0001861;gene_name=BPY2C;ID=intron:HG002_chrY_T0001861:4;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23833673	23833797	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001861;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001861;transcript_name=HG002_chrY_T0001861;gene_name=BPY2C;ID=exon:HG002_chrY_T0001861:5;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23833798	23840347	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001861;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001861;transcript_name=HG002_chrY_T0001861;gene_name=BPY2C;ID=intron:HG002_chrY_T0001861:5;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23840348	23840477	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001861;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001861;transcript_name=HG002_chrY_T0001861;gene_name=BPY2C;ID=exon:HG002_chrY_T0001861:6;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23840478	23840566	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001861;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001861;transcript_name=HG002_chrY_T0001861;gene_name=BPY2C;ID=intron:HG002_chrY_T0001861:6;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23840567	23840829	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001861;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001861;transcript_name=HG002_chrY_T0001861;gene_name=BPY2C;ID=exon:HG002_chrY_T0001861:7;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	23827766	23833691	10000	+	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001862;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_G0000638;transcript_name=HG002_chrY_T0001862;gene_name=BPY2C;ID=HG002_chrY_T0001862;Name=BPY2C
HG002_chrY	CAT	exon	23827766	23827843	.	+	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001862;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001862;transcript_name=HG002_chrY_T0001862;gene_name=BPY2C;ID=exon:HG002_chrY_T0001862:0;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23827766	23827843	.	+	0	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001862;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001862;transcript_name=HG002_chrY_T0001862;gene_name=BPY2C;ID=CDS:HG002_chrY_T0001862:0;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	23827766	23827768	.	+	0	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001862;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001862;transcript_name=HG002_chrY_T0001862;gene_name=BPY2C;ID=start_codon:HG002_chrY_T0001862;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23827844	23829902	.	+	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001862;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001862;transcript_name=HG002_chrY_T0001862;gene_name=BPY2C;ID=intron:HG002_chrY_T0001862:0;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23829903	23830020	.	+	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001862;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001862;transcript_name=HG002_chrY_T0001862;gene_name=BPY2C;ID=exon:HG002_chrY_T0001862:1;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23829903	23830020	.	+	0	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001862;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001862;transcript_name=HG002_chrY_T0001862;gene_name=BPY2C;ID=CDS:HG002_chrY_T0001862:1;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23830021	23832874	.	+	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001862;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001862;transcript_name=HG002_chrY_T0001862;gene_name=BPY2C;ID=intron:HG002_chrY_T0001862:1;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23832875	23832980	.	+	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001862;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001862;transcript_name=HG002_chrY_T0001862;gene_name=BPY2C;ID=exon:HG002_chrY_T0001862:2;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23832875	23832980	.	+	2	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001862;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001862;transcript_name=HG002_chrY_T0001862;gene_name=BPY2C;ID=CDS:HG002_chrY_T0001862:2;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23832981	23833672	.	+	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001862;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001862;transcript_name=HG002_chrY_T0001862;gene_name=BPY2C;ID=intron:HG002_chrY_T0001862:2;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23833673	23833691	.	+	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001862;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001862;transcript_name=HG002_chrY_T0001862;gene_name=BPY2C;ID=exon:HG002_chrY_T0001862:3;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23833673	23833691	.	+	1	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001862;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001862;transcript_name=HG002_chrY_T0001862;gene_name=BPY2C;ID=CDS:HG002_chrY_T0001862:3;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	23833689	23833691	.	+	0	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG002_chrY_T0001862;gene_id=HG002_chrY_G0000638;Parent=HG002_chrY_T0001862;transcript_name=HG002_chrY_T0001862;gene_name=BPY2C;ID=stop_codon:HG002_chrY_T0001862;Name=BPY2C;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23852489	23853215	.	+	.	source_gene_common_name=ENSG00000240566;source_gene=ENSG00000240566.1;gene_id=HG002_chrY_G0000639;gene_biotype=processed_pseudogene;gene_name=ENSG00000240566;gene_sources=liftoff;ID=HG002_chrY_G0000639;Name=ENSG00000240566
HG002_chrY	CAT	transcript	23852489	23853215	1000	+	.	source_transcript=ENST00000432862.1;source_transcript_name=ENST00000432862;source_gene=ENSG00000240566.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000240566.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000432862.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432862.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000240566;transcript_id=HG002_chrY_T0001863;gene_id=HG002_chrY_G0000639;Parent=HG002_chrY_G0000639;transcript_name=HG002_chrY_T0001863;gene_name=ENSG00000240566;ID=HG002_chrY_T0001863;Name=ENSG00000240566
HG002_chrY	CAT	exon	23852489	23853215	.	+	.	source_transcript=ENST00000432862.1;source_transcript_name=ENST00000432862;source_gene=ENSG00000240566.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000240566.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000432862.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432862.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000240566;transcript_id=HG002_chrY_T0001863;gene_id=HG002_chrY_G0000639;Parent=HG002_chrY_T0001863;transcript_name=HG002_chrY_T0001863;gene_name=ENSG00000240566;ID=exon:HG002_chrY_T0001863:0;Name=ENSG00000240566;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23861021	23862090	.	+	.	source_gene_common_name=TRIM60P10Y;source_gene=ENSG00000232976.1;gene_id=HG002_chrY_G0000640;gene_biotype=processed_pseudogene;gene_name=TRIM60P10Y;gene_sources=liftoff;ID=HG002_chrY_G0000640;Name=TRIM60P10Y
HG002_chrY	CAT	transcript	23861021	23862090	1000	+	.	source_transcript=ENST00000425589.1;source_transcript_name=TRIM60P10Y-201;source_gene=ENSG00000232976.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232976.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425589.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425589.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P10Y;transcript_id=HG002_chrY_T0001864;gene_id=HG002_chrY_G0000640;Parent=HG002_chrY_G0000640;transcript_name=HG002_chrY_T0001864;gene_name=TRIM60P10Y;ID=HG002_chrY_T0001864;Name=TRIM60P10Y
HG002_chrY	CAT	exon	23861021	23861251	.	+	.	source_transcript=ENST00000425589.1;source_transcript_name=TRIM60P10Y-201;source_gene=ENSG00000232976.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232976.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425589.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425589.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P10Y;transcript_id=HG002_chrY_T0001864;gene_id=HG002_chrY_G0000640;Parent=HG002_chrY_T0001864;transcript_name=HG002_chrY_T0001864;gene_name=TRIM60P10Y;ID=exon:HG002_chrY_T0001864:0;Name=TRIM60P10Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23861252	23861570	.	+	.	source_transcript=ENST00000425589.1;source_transcript_name=TRIM60P10Y-201;source_gene=ENSG00000232976.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232976.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425589.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425589.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P10Y;transcript_id=HG002_chrY_T0001864;gene_id=HG002_chrY_G0000640;Parent=HG002_chrY_T0001864;transcript_name=HG002_chrY_T0001864;gene_name=TRIM60P10Y;ID=intron:HG002_chrY_T0001864:0;Name=TRIM60P10Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23861571	23862090	.	+	.	source_transcript=ENST00000425589.1;source_transcript_name=TRIM60P10Y-201;source_gene=ENSG00000232976.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232976.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425589.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425589.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P10Y;transcript_id=HG002_chrY_T0001864;gene_id=HG002_chrY_G0000640;Parent=HG002_chrY_T0001864;transcript_name=HG002_chrY_T0001864;gene_name=TRIM60P10Y;ID=exon:HG002_chrY_T0001864:1;Name=TRIM60P10Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23885344	23886622	.	+	.	source_gene_common_name=ZNF736P2Y;source_gene=ENSG00000226270.3;gene_id=HG002_chrY_G0000641;gene_biotype=processed_pseudogene;gene_name=ZNF736P2Y;gene_sources=liftoff;ID=HG002_chrY_G0000641;Name=ZNF736P2Y
HG002_chrY	CAT	transcript	23885344	23886622	1000	+	.	source_transcript=ENST00000416040.1;source_transcript_name=ZNF736P2Y-201;source_gene=ENSG00000226270.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226270.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000416040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416040.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P2Y;transcript_id=HG002_chrY_T0001865;gene_id=HG002_chrY_G0000641;Parent=HG002_chrY_G0000641;transcript_name=HG002_chrY_T0001865;gene_name=ZNF736P2Y;ID=HG002_chrY_T0001865;Name=ZNF736P2Y
HG002_chrY	CAT	exon	23885344	23886622	.	+	.	source_transcript=ENST00000416040.1;source_transcript_name=ZNF736P2Y-201;source_gene=ENSG00000226270.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226270.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000416040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P2Y;transcript_id=HG002_chrY_T0001865;gene_id=HG002_chrY_G0000641;Parent=HG002_chrY_T0001865;transcript_name=HG002_chrY_T0001865;gene_name=ZNF736P2Y;ID=exon:HG002_chrY_T0001865:0;Name=ZNF736P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23893470	23894615	.	+	.	source_gene_common_name=TRIM60P11Y;source_gene=ENSG00000227837.1;gene_id=HG002_chrY_G0000642;gene_biotype=processed_pseudogene;gene_name=TRIM60P11Y;gene_sources=liftoff;ID=HG002_chrY_G0000642;Name=TRIM60P11Y
HG002_chrY	CAT	transcript	23893470	23894615	1000	+	.	source_transcript=ENST00000445313.1;source_transcript_name=TRIM60P11Y-201;source_gene=ENSG00000227837.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227837.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445313.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P11Y;transcript_id=HG002_chrY_T0001866;gene_id=HG002_chrY_G0000642;Parent=HG002_chrY_G0000642;transcript_name=HG002_chrY_T0001866;gene_name=TRIM60P11Y;ID=HG002_chrY_T0001866;Name=TRIM60P11Y
HG002_chrY	CAT	exon	23893470	23893758	.	+	.	source_transcript=ENST00000445313.1;source_transcript_name=TRIM60P11Y-201;source_gene=ENSG00000227837.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227837.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445313.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P11Y;transcript_id=HG002_chrY_T0001866;gene_id=HG002_chrY_G0000642;Parent=HG002_chrY_T0001866;transcript_name=HG002_chrY_T0001866;gene_name=TRIM60P11Y;ID=exon:HG002_chrY_T0001866:0;Name=TRIM60P11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23893759	23894099	.	+	.	source_transcript=ENST00000445313.1;source_transcript_name=TRIM60P11Y-201;source_gene=ENSG00000227837.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227837.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445313.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P11Y;transcript_id=HG002_chrY_T0001866;gene_id=HG002_chrY_G0000642;Parent=HG002_chrY_T0001866;transcript_name=HG002_chrY_T0001866;gene_name=TRIM60P11Y;ID=intron:HG002_chrY_T0001866:0;Name=TRIM60P11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23894100	23894615	.	+	.	source_transcript=ENST00000445313.1;source_transcript_name=TRIM60P11Y-201;source_gene=ENSG00000227837.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227837.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445313.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P11Y;transcript_id=HG002_chrY_T0001866;gene_id=HG002_chrY_G0000642;Parent=HG002_chrY_T0001866;transcript_name=HG002_chrY_T0001866;gene_name=TRIM60P11Y;ID=exon:HG002_chrY_T0001866:1;Name=TRIM60P11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	23964743	24026040	.	-	.	source_gene_common_name=DAZ3;source_gene=ENSG00000187191.16;gene_id=HG002_chrY_G0000643;gene_biotype=protein_coding;gene_name=DAZ3;gene_sources=liftoff;ID=HG002_chrY_G0000643;Name=DAZ3
HG002_chrY	CAT	transcript	23964743	24026040	9980	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_G0000643;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=HG002_chrY_T0001867;Name=DAZ3
HG002_chrY	CAT	exon	23964743	23966599	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=exon:HG002_chrY_T0001867:0;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23966600	23970572	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=intron:HG002_chrY_T0001867:0;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23970573	23970671	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=exon:HG002_chrY_T0001867:1;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23970608	23970671	.	-	1	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001867:0;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	23970608	23970610	.	-	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=stop_codon:HG002_chrY_T0001867;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23970672	23975243	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=intron:HG002_chrY_T0001867:1;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23975244	23975278	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=exon:HG002_chrY_T0001867:2;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23975244	23975278	.	-	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001867:1;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23975279	23976023	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=intron:HG002_chrY_T0001867:2;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23976024	23976095	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=exon:HG002_chrY_T0001867:3;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23976024	23976095	.	-	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001867:2;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23976096	23990567	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=intron:HG002_chrY_T0001867:3;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23990568	23990639	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=exon:HG002_chrY_T0001867:4;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23990568	23990639	.	-	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001867:3;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23990640	23992944	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=intron:HG002_chrY_T0001867:4;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23992945	23993016	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=exon:HG002_chrY_T0001867:5;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23992945	23993016	.	-	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001867:4;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23993017	23995340	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=intron:HG002_chrY_T0001867:5;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23995341	23995412	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=exon:HG002_chrY_T0001867:6;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23995341	23995412	.	-	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001867:5;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23995413	23997724	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=intron:HG002_chrY_T0001867:6;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23997725	23997796	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=exon:HG002_chrY_T0001867:7;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23997725	23997796	.	-	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001867:6;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23997797	24000120	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=intron:HG002_chrY_T0001867:7;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24000121	24000192	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=exon:HG002_chrY_T0001867:8;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24000121	24000192	.	-	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001867:7;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24000193	24002510	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=intron:HG002_chrY_T0001867:8;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24002511	24002582	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=exon:HG002_chrY_T0001867:9;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24002511	24002582	.	-	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001867:8;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24002583	24004953	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=intron:HG002_chrY_T0001867:9;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24004954	24005025	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=exon:HG002_chrY_T0001867:10;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24004954	24005025	.	-	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001867:9;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24005026	24017275	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=intron:HG002_chrY_T0001867:10;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24017276	24017415	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=exon:HG002_chrY_T0001867:11;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24017276	24017415	.	-	2	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001867:10;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24017416	24017504	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=intron:HG002_chrY_T0001867:11;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24017505	24017568	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=exon:HG002_chrY_T0001867:12;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24017505	24017568	.	-	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001867:11;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24017569	24018004	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=intron:HG002_chrY_T0001867:12;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24018005	24018056	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=exon:HG002_chrY_T0001867:13;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24018005	24018056	.	-	1	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001867:12;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24018057	24018616	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=intron:HG002_chrY_T0001867:13;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24018617	24018708	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=exon:HG002_chrY_T0001867:14;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24018617	24018708	.	-	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001867:13;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24018709	24018982	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=intron:HG002_chrY_T0001867:14;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24018983	24019129	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=exon:HG002_chrY_T0001867:15;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24018983	24019129	.	-	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001867:14;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24019130	24025730	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=intron:HG002_chrY_T0001867:15;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24025731	24026040	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=exon:HG002_chrY_T0001867:16;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24025731	24025733	.	-	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001867:15;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	24025731	24025733	.	-	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001867;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001867;transcript_name=HG002_chrY_T0001867;gene_name=DAZ3;ID=start_codon:HG002_chrY_T0001867;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	23964743	24026017	9980	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_G0000643;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=HG002_chrY_T0001868;Name=DAZ3
HG002_chrY	CAT	exon	23964743	23966599	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=exon:HG002_chrY_T0001868:0;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23966600	23970572	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=intron:HG002_chrY_T0001868:0;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23970573	23970671	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=exon:HG002_chrY_T0001868:1;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23970608	23970671	.	-	1	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001868:0;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	23970608	23970610	.	-	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=stop_codon:HG002_chrY_T0001868;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23970672	23975243	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=intron:HG002_chrY_T0001868:1;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23975244	23975278	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=exon:HG002_chrY_T0001868:2;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23975244	23975278	.	-	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001868:1;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23975279	23976023	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=intron:HG002_chrY_T0001868:2;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23976024	23976095	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=exon:HG002_chrY_T0001868:3;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23976024	23976095	.	-	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001868:2;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23976096	23985810	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=intron:HG002_chrY_T0001868:3;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23985811	23985882	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=exon:HG002_chrY_T0001868:4;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23985811	23985882	.	-	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001868:3;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23985883	23990567	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=intron:HG002_chrY_T0001868:4;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23990568	23990639	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=exon:HG002_chrY_T0001868:5;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23990568	23990639	.	-	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001868:4;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23990640	23995340	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=intron:HG002_chrY_T0001868:5;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23995341	23995412	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=exon:HG002_chrY_T0001868:6;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23995341	23995412	.	-	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001868:5;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23995413	24000120	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=intron:HG002_chrY_T0001868:6;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24000121	24000192	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=exon:HG002_chrY_T0001868:7;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24000121	24000192	.	-	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001868:6;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24000193	24002510	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=intron:HG002_chrY_T0001868:7;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24002511	24002582	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=exon:HG002_chrY_T0001868:8;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24002511	24002582	.	-	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001868:7;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24002583	24004953	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=intron:HG002_chrY_T0001868:8;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24004954	24005025	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=exon:HG002_chrY_T0001868:9;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24004954	24005025	.	-	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001868:8;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24005026	24017275	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=intron:HG002_chrY_T0001868:9;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24017276	24017415	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=exon:HG002_chrY_T0001868:10;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24017276	24017415	.	-	2	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001868:9;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24017416	24017504	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=intron:HG002_chrY_T0001868:10;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24017505	24017568	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=exon:HG002_chrY_T0001868:11;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24017505	24017568	.	-	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001868:10;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24017569	24018004	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=intron:HG002_chrY_T0001868:11;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24018005	24018056	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=exon:HG002_chrY_T0001868:12;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24018005	24018056	.	-	1	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001868:11;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24018057	24018616	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=intron:HG002_chrY_T0001868:12;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24018617	24018708	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=exon:HG002_chrY_T0001868:13;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24018617	24018708	.	-	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001868:12;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24018709	24018982	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=intron:HG002_chrY_T0001868:13;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24018983	24019129	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=exon:HG002_chrY_T0001868:14;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24018983	24019129	.	-	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001868:13;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24019130	24025730	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=intron:HG002_chrY_T0001868:14;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24025731	24026017	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=exon:HG002_chrY_T0001868:15;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24025731	24025733	.	-	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001868:14;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	24025731	24025733	.	-	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001868;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001868;transcript_name=HG002_chrY_T0001868;gene_name=DAZ3;ID=start_codon:HG002_chrY_T0001868;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	23964743	24025941	9980	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_G0000643;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=HG002_chrY_T0001869;Name=DAZ3
HG002_chrY	CAT	exon	23964743	23966599	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=exon:HG002_chrY_T0001869:0;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23966600	23970572	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=intron:HG002_chrY_T0001869:0;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23970573	23970671	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=exon:HG002_chrY_T0001869:1;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23970608	23970671	.	-	1	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001869:0;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	23970608	23970610	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=stop_codon:HG002_chrY_T0001869;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23970672	23975243	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=intron:HG002_chrY_T0001869:1;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23975244	23975278	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=exon:HG002_chrY_T0001869:2;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23975244	23975278	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001869:1;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23975279	23976023	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=intron:HG002_chrY_T0001869:2;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23976024	23976095	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=exon:HG002_chrY_T0001869:3;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23976024	23976095	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001869:2;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23976096	23985810	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=intron:HG002_chrY_T0001869:3;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23985811	23985882	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=exon:HG002_chrY_T0001869:4;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23985811	23985882	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001869:3;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23985883	23988187	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=intron:HG002_chrY_T0001869:4;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23988188	23988259	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=exon:HG002_chrY_T0001869:5;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23988188	23988259	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001869:4;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23988260	23990567	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=intron:HG002_chrY_T0001869:5;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23990568	23990639	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=exon:HG002_chrY_T0001869:6;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23990568	23990639	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001869:5;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23990640	23992944	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=intron:HG002_chrY_T0001869:6;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23992945	23993016	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=exon:HG002_chrY_T0001869:7;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23992945	23993016	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001869:6;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23993017	23995340	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=intron:HG002_chrY_T0001869:7;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23995341	23995412	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=exon:HG002_chrY_T0001869:8;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23995341	23995412	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001869:7;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23995413	23997724	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=intron:HG002_chrY_T0001869:8;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23997725	23997796	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=exon:HG002_chrY_T0001869:9;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	23997725	23997796	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001869:8;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23997797	24000120	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=intron:HG002_chrY_T0001869:9;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24000121	24000192	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=exon:HG002_chrY_T0001869:10;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24000121	24000192	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001869:9;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24000193	24002510	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=intron:HG002_chrY_T0001869:10;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24002511	24002582	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=exon:HG002_chrY_T0001869:11;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24002511	24002582	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001869:10;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24002583	24004953	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=intron:HG002_chrY_T0001869:11;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24004954	24005025	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=exon:HG002_chrY_T0001869:12;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24004954	24005025	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001869:11;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24005026	24017275	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=intron:HG002_chrY_T0001869:12;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24017276	24017415	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=exon:HG002_chrY_T0001869:13;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24017276	24017415	.	-	2	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001869:12;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24017416	24017504	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=intron:HG002_chrY_T0001869:13;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24017505	24017568	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=exon:HG002_chrY_T0001869:14;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24017505	24017568	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001869:13;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24017569	24018004	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=intron:HG002_chrY_T0001869:14;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24018005	24018056	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=exon:HG002_chrY_T0001869:15;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24018005	24018056	.	-	1	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001869:14;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24018057	24018616	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=intron:HG002_chrY_T0001869:15;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24018617	24018708	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=exon:HG002_chrY_T0001869:16;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24018617	24018708	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001869:15;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24018709	24018982	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=intron:HG002_chrY_T0001869:16;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24018983	24019129	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=exon:HG002_chrY_T0001869:17;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24018983	24019129	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001869:16;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24019130	24025730	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=intron:HG002_chrY_T0001869:17;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24025731	24025941	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=exon:HG002_chrY_T0001869:18;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24025731	24025733	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=CDS:HG002_chrY_T0001869:17;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	24025731	24025733	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001869;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001869;transcript_name=HG002_chrY_T0001869;gene_name=DAZ3;ID=start_codon:HG002_chrY_T0001869;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	23964751	23976210	1000	-	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000466332.1;transcript_id=HG002_chrY_T0001870;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_G0000643;transcript_name=HG002_chrY_T0001870;gene_name=DAZ3;ID=HG002_chrY_T0001870;Name=DAZ3
HG002_chrY	CAT	exon	23964751	23966599	.	-	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000466332.1;transcript_id=HG002_chrY_T0001870;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001870;transcript_name=HG002_chrY_T0001870;gene_name=DAZ3;ID=exon:HG002_chrY_T0001870:0;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23966600	23970572	.	-	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000466332.1;transcript_id=HG002_chrY_T0001870;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001870;transcript_name=HG002_chrY_T0001870;gene_name=DAZ3;ID=intron:HG002_chrY_T0001870:0;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23970573	23970671	.	-	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000466332.1;transcript_id=HG002_chrY_T0001870;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001870;transcript_name=HG002_chrY_T0001870;gene_name=DAZ3;ID=exon:HG002_chrY_T0001870:1;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23970672	23973606	.	-	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000466332.1;transcript_id=HG002_chrY_T0001870;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001870;transcript_name=HG002_chrY_T0001870;gene_name=DAZ3;ID=intron:HG002_chrY_T0001870:1;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23973607	23973678	.	-	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000466332.1;transcript_id=HG002_chrY_T0001870;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001870;transcript_name=HG002_chrY_T0001870;gene_name=DAZ3;ID=exon:HG002_chrY_T0001870:2;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23973679	23975243	.	-	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000466332.1;transcript_id=HG002_chrY_T0001870;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001870;transcript_name=HG002_chrY_T0001870;gene_name=DAZ3;ID=intron:HG002_chrY_T0001870:2;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23975244	23975278	.	-	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000466332.1;transcript_id=HG002_chrY_T0001870;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001870;transcript_name=HG002_chrY_T0001870;gene_name=DAZ3;ID=exon:HG002_chrY_T0001870:3;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23975279	23976023	.	-	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000466332.1;transcript_id=HG002_chrY_T0001870;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001870;transcript_name=HG002_chrY_T0001870;gene_name=DAZ3;ID=intron:HG002_chrY_T0001870:3;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23976024	23976210	.	-	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=ENST00000466332.1;transcript_id=HG002_chrY_T0001870;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001870;transcript_name=HG002_chrY_T0001870;gene_name=DAZ3;ID=exon:HG002_chrY_T0001870:4;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	23965431	23976222	1000	-	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001871;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_G0000643;transcript_name=HG002_chrY_T0001871;gene_name=DAZ3;ID=HG002_chrY_T0001871;Name=DAZ3
HG002_chrY	CAT	exon	23965431	23966599	.	-	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001871;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001871;transcript_name=HG002_chrY_T0001871;gene_name=DAZ3;ID=exon:HG002_chrY_T0001871:0;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23966600	23970572	.	-	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001871;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001871;transcript_name=HG002_chrY_T0001871;gene_name=DAZ3;ID=intron:HG002_chrY_T0001871:0;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23970573	23970671	.	-	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001871;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001871;transcript_name=HG002_chrY_T0001871;gene_name=DAZ3;ID=exon:HG002_chrY_T0001871:1;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23970672	23975243	.	-	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001871;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001871;transcript_name=HG002_chrY_T0001871;gene_name=DAZ3;ID=intron:HG002_chrY_T0001871:1;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23975244	23975278	.	-	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001871;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001871;transcript_name=HG002_chrY_T0001871;gene_name=DAZ3;ID=exon:HG002_chrY_T0001871:2;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	23975279	23976023	.	-	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001871;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001871;transcript_name=HG002_chrY_T0001871;gene_name=DAZ3;ID=intron:HG002_chrY_T0001871:2;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	23976024	23976222	.	-	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG002_chrY_T0001871;gene_id=HG002_chrY_G0000643;Parent=HG002_chrY_T0001871;transcript_name=HG002_chrY_T0001871;gene_name=DAZ3;ID=exon:HG002_chrY_T0001871:3;Name=DAZ3;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24046391	24099209	.	+	.	source_gene_common_name=DAZ4;source_gene=ENSG00000205916.12;gene_id=HG002_chrY_G0000644;gene_biotype=protein_coding;gene_name=DAZ4;gene_sources=liftoff;ID=HG002_chrY_G0000644;Name=DAZ4
HG002_chrY	CAT	transcript	24046391	24099209	9920	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;frameshift=True;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001872;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_G0000644;transcript_name=HG002_chrY_T0001872;gene_name=DAZ4;ID=HG002_chrY_T0001872;Name=DAZ4
HG002_chrY	CAT	exon	24046391	24046677	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001872;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001872;transcript_name=HG002_chrY_T0001872;gene_name=DAZ4;ID=exon:HG002_chrY_T0001872:0;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24046675	24046677	.	+	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001872;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001872;transcript_name=HG002_chrY_T0001872;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001872:0;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	24046675	24046677	.	+	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001872;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001872;transcript_name=HG002_chrY_T0001872;gene_name=DAZ4;ID=start_codon:HG002_chrY_T0001872;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24046678	24056532	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001872;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001872;transcript_name=HG002_chrY_T0001872;gene_name=DAZ4;ID=intron:HG002_chrY_T0001872:0;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24056533	24056604	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001872;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001872;transcript_name=HG002_chrY_T0001872;gene_name=DAZ4;ID=exon:HG002_chrY_T0001872:1;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24056533	24056604	.	+	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001872;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001872;transcript_name=HG002_chrY_T0001872;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001872:1;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24056605	24058975	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001872;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001872;transcript_name=HG002_chrY_T0001872;gene_name=DAZ4;ID=intron:HG002_chrY_T0001872:1;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24058976	24059047	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001872;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001872;transcript_name=HG002_chrY_T0001872;gene_name=DAZ4;ID=exon:HG002_chrY_T0001872:2;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24058976	24059047	.	+	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001872;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001872;transcript_name=HG002_chrY_T0001872;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001872:2;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24059048	24075935	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001872;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001872;transcript_name=HG002_chrY_T0001872;gene_name=DAZ4;ID=intron:HG002_chrY_T0001872:2;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24075936	24076007	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001872;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001872;transcript_name=HG002_chrY_T0001872;gene_name=DAZ4;ID=exon:HG002_chrY_T0001872:3;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24075936	24076007	.	+	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001872;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001872;transcript_name=HG002_chrY_T0001872;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001872:3;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24076008	24078320	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001872;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001872;transcript_name=HG002_chrY_T0001872;gene_name=DAZ4;ID=intron:HG002_chrY_T0001872:3;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24078321	24078392	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001872;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001872;transcript_name=HG002_chrY_T0001872;gene_name=DAZ4;ID=exon:HG002_chrY_T0001872:4;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24078321	24078392	.	+	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001872;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001872;transcript_name=HG002_chrY_T0001872;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001872:4;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24078393	24080704	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001872;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001872;transcript_name=HG002_chrY_T0001872;gene_name=DAZ4;ID=intron:HG002_chrY_T0001872:4;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24080705	24080776	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001872;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001872;transcript_name=HG002_chrY_T0001872;gene_name=DAZ4;ID=exon:HG002_chrY_T0001872:5;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24080705	24080776	.	+	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001872;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001872;transcript_name=HG002_chrY_T0001872;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001872:5;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24080777	24087856	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001872;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001872;transcript_name=HG002_chrY_T0001872;gene_name=DAZ4;ID=intron:HG002_chrY_T0001872:5;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24087857	24087928	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001872;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001872;transcript_name=HG002_chrY_T0001872;gene_name=DAZ4;ID=exon:HG002_chrY_T0001872:6;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24087857	24087928	.	+	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001872;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001872;transcript_name=HG002_chrY_T0001872;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001872:6;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24087929	24088673	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001872;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001872;transcript_name=HG002_chrY_T0001872;gene_name=DAZ4;ID=intron:HG002_chrY_T0001872:6;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24088674	24088708	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001872;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001872;transcript_name=HG002_chrY_T0001872;gene_name=DAZ4;ID=exon:HG002_chrY_T0001872:7;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24088674	24088708	.	+	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001872;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001872;transcript_name=HG002_chrY_T0001872;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001872:7;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24088709	24093280	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001872;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001872;transcript_name=HG002_chrY_T0001872;gene_name=DAZ4;ID=intron:HG002_chrY_T0001872:7;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24093281	24093379	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001872;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001872;transcript_name=HG002_chrY_T0001872;gene_name=DAZ4;ID=exon:HG002_chrY_T0001872:8;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24093281	24093344	.	+	1	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001872;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001872;transcript_name=HG002_chrY_T0001872;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001872:8;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	24093342	24093344	.	+	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001872;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001872;transcript_name=HG002_chrY_T0001872;gene_name=DAZ4;ID=stop_codon:HG002_chrY_T0001872;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24093380	24097352	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001872;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001872;transcript_name=HG002_chrY_T0001872;gene_name=DAZ4;ID=intron:HG002_chrY_T0001872:8;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24097353	24099209	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001872;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001872;transcript_name=HG002_chrY_T0001872;gene_name=DAZ4;ID=exon:HG002_chrY_T0001872:9;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24046465	24099205	100	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001873;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_G0000644;transcript_name=HG002_chrY_T0001873;gene_name=DAZ4;ID=HG002_chrY_T0001873;Name=DAZ4
HG002_chrY	CAT	exon	24046465	24046677	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001873;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001873;transcript_name=HG002_chrY_T0001873;gene_name=DAZ4;ID=exon:HG002_chrY_T0001873:0;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24046675	24046677	.	+	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001873;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001873;transcript_name=HG002_chrY_T0001873;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001873:0;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	24046675	24046677	.	+	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001873;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001873;transcript_name=HG002_chrY_T0001873;gene_name=DAZ4;ID=start_codon:HG002_chrY_T0001873;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24046678	24056532	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001873;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001873;transcript_name=HG002_chrY_T0001873;gene_name=DAZ4;ID=intron:HG002_chrY_T0001873:0;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24056533	24056604	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001873;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001873;transcript_name=HG002_chrY_T0001873;gene_name=DAZ4;ID=exon:HG002_chrY_T0001873:1;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24056533	24056604	.	+	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001873;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001873;transcript_name=HG002_chrY_T0001873;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001873:1;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24056605	24058975	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001873;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001873;transcript_name=HG002_chrY_T0001873;gene_name=DAZ4;ID=intron:HG002_chrY_T0001873:1;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24058976	24059047	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001873;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001873;transcript_name=HG002_chrY_T0001873;gene_name=DAZ4;ID=exon:HG002_chrY_T0001873:2;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24058976	24059047	.	+	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001873;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001873;transcript_name=HG002_chrY_T0001873;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001873:2;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24059048	24061365	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001873;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001873;transcript_name=HG002_chrY_T0001873;gene_name=DAZ4;ID=intron:HG002_chrY_T0001873:2;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24061366	24061437	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001873;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001873;transcript_name=HG002_chrY_T0001873;gene_name=DAZ4;ID=exon:HG002_chrY_T0001873:3;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24061366	24061437	.	+	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001873;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001873;transcript_name=HG002_chrY_T0001873;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001873:3;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24061438	24063761	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001873;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001873;transcript_name=HG002_chrY_T0001873;gene_name=DAZ4;ID=intron:HG002_chrY_T0001873:3;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24063762	24063833	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001873;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001873;transcript_name=HG002_chrY_T0001873;gene_name=DAZ4;ID=exon:HG002_chrY_T0001873:4;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24063762	24063833	.	+	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001873;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001873;transcript_name=HG002_chrY_T0001873;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001873:4;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24063834	24087856	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001873;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001873;transcript_name=HG002_chrY_T0001873;gene_name=DAZ4;ID=intron:HG002_chrY_T0001873:4;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24087857	24087928	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001873;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001873;transcript_name=HG002_chrY_T0001873;gene_name=DAZ4;ID=exon:HG002_chrY_T0001873:5;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24087857	24087928	.	+	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001873;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001873;transcript_name=HG002_chrY_T0001873;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001873:5;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24087929	24088673	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001873;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001873;transcript_name=HG002_chrY_T0001873;gene_name=DAZ4;ID=intron:HG002_chrY_T0001873:5;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24088674	24088708	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001873;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001873;transcript_name=HG002_chrY_T0001873;gene_name=DAZ4;ID=exon:HG002_chrY_T0001873:6;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24088674	24088708	.	+	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001873;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001873;transcript_name=HG002_chrY_T0001873;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001873:6;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24088709	24093280	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001873;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001873;transcript_name=HG002_chrY_T0001873;gene_name=DAZ4;ID=intron:HG002_chrY_T0001873:6;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24093281	24093379	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001873;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001873;transcript_name=HG002_chrY_T0001873;gene_name=DAZ4;ID=exon:HG002_chrY_T0001873:7;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24093281	24093344	.	+	1	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001873;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001873;transcript_name=HG002_chrY_T0001873;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001873:7;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	24093342	24093344	.	+	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001873;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001873;transcript_name=HG002_chrY_T0001873;gene_name=DAZ4;ID=stop_codon:HG002_chrY_T0001873;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24093380	24097352	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001873;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001873;transcript_name=HG002_chrY_T0001873;gene_name=DAZ4;ID=intron:HG002_chrY_T0001873:7;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24097353	24099205	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001873;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001873;transcript_name=HG002_chrY_T0001873;gene_name=DAZ4;ID=exon:HG002_chrY_T0001873:8;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24046465	24099205	100	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_G0000644;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=HG002_chrY_T0001874;Name=DAZ4
HG002_chrY	CAT	exon	24046465	24046677	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=exon:HG002_chrY_T0001874:0;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24046675	24046677	.	+	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001874:0;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	24046675	24046677	.	+	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=start_codon:HG002_chrY_T0001874;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24046678	24053278	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=intron:HG002_chrY_T0001874:0;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24053279	24053425	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=exon:HG002_chrY_T0001874:1;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24053279	24053425	.	+	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001874:1;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24053426	24053699	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=intron:HG002_chrY_T0001874:1;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24053700	24053791	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=exon:HG002_chrY_T0001874:2;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24053700	24053791	.	+	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001874:2;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24053792	24054351	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=intron:HG002_chrY_T0001874:2;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24054352	24054403	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=exon:HG002_chrY_T0001874:3;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24054352	24054403	.	+	1	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001874:3;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24054404	24054839	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=intron:HG002_chrY_T0001874:3;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24054840	24054903	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=exon:HG002_chrY_T0001874:4;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24054840	24054903	.	+	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001874:4;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24054904	24054992	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=intron:HG002_chrY_T0001874:4;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24054993	24055132	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=exon:HG002_chrY_T0001874:5;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24054993	24055132	.	+	2	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001874:5;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24055133	24056532	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=intron:HG002_chrY_T0001874:5;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24056533	24056604	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=exon:HG002_chrY_T0001874:6;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24056533	24056604	.	+	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001874:6;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24056605	24058975	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=intron:HG002_chrY_T0001874:6;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24058976	24059047	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=exon:HG002_chrY_T0001874:7;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24058976	24059047	.	+	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001874:7;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24059048	24061365	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=intron:HG002_chrY_T0001874:7;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24061366	24061437	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=exon:HG002_chrY_T0001874:8;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24061366	24061437	.	+	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001874:8;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24061438	24063761	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=intron:HG002_chrY_T0001874:8;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24063762	24063833	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=exon:HG002_chrY_T0001874:9;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24063762	24063833	.	+	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001874:9;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24063834	24087856	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=intron:HG002_chrY_T0001874:9;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24087857	24087928	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=exon:HG002_chrY_T0001874:10;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24087857	24087928	.	+	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001874:10;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24087929	24088673	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=intron:HG002_chrY_T0001874:10;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24088674	24088708	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=exon:HG002_chrY_T0001874:11;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24088674	24088708	.	+	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001874:11;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24088709	24093280	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=intron:HG002_chrY_T0001874:11;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24093281	24093379	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=exon:HG002_chrY_T0001874:12;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24093281	24093344	.	+	1	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001874:12;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	24093342	24093344	.	+	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=stop_codon:HG002_chrY_T0001874;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24093380	24097352	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=intron:HG002_chrY_T0001874:12;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24097353	24099205	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001874;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001874;transcript_name=HG002_chrY_T0001874;gene_name=DAZ4;ID=exon:HG002_chrY_T0001874:13;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24046467	24099209	100	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_G0000644;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=HG002_chrY_T0001875;Name=DAZ4
HG002_chrY	CAT	exon	24046467	24046677	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=exon:HG002_chrY_T0001875:0;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24046675	24046677	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001875:0;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	24046675	24046677	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=start_codon:HG002_chrY_T0001875;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24046678	24053278	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=intron:HG002_chrY_T0001875:0;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24053279	24053425	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=exon:HG002_chrY_T0001875:1;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24053279	24053425	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001875:1;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24053426	24053699	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=intron:HG002_chrY_T0001875:1;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24053700	24053791	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=exon:HG002_chrY_T0001875:2;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24053700	24053791	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001875:2;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24053792	24054351	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=intron:HG002_chrY_T0001875:2;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24054352	24054403	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=exon:HG002_chrY_T0001875:3;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24054352	24054403	.	+	1	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001875:3;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24054404	24054839	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=intron:HG002_chrY_T0001875:3;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24054840	24054903	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=exon:HG002_chrY_T0001875:4;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24054840	24054903	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001875:4;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24054904	24054992	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=intron:HG002_chrY_T0001875:4;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24054993	24055132	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=exon:HG002_chrY_T0001875:5;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24054993	24055132	.	+	2	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001875:5;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24055133	24056532	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=intron:HG002_chrY_T0001875:5;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24056533	24056604	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=exon:HG002_chrY_T0001875:6;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24056533	24056604	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001875:6;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24056605	24058975	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=intron:HG002_chrY_T0001875:6;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24058976	24059047	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=exon:HG002_chrY_T0001875:7;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24058976	24059047	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001875:7;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24059048	24061365	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=intron:HG002_chrY_T0001875:7;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24061366	24061437	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=exon:HG002_chrY_T0001875:8;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24061366	24061437	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001875:8;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24061438	24063761	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=intron:HG002_chrY_T0001875:8;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24063762	24063833	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=exon:HG002_chrY_T0001875:9;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24063762	24063833	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001875:9;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24063834	24075935	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=intron:HG002_chrY_T0001875:9;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24075936	24076007	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=exon:HG002_chrY_T0001875:10;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24075936	24076007	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001875:10;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24076008	24078320	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=intron:HG002_chrY_T0001875:10;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24078321	24078392	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=exon:HG002_chrY_T0001875:11;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24078321	24078392	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001875:11;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24078393	24080704	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=intron:HG002_chrY_T0001875:11;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24080705	24080776	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=exon:HG002_chrY_T0001875:12;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24080705	24080776	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001875:12;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24080777	24083088	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=intron:HG002_chrY_T0001875:12;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24083089	24083160	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=exon:HG002_chrY_T0001875:13;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24083089	24083160	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001875:13;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24083161	24085472	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=intron:HG002_chrY_T0001875:13;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24085473	24085544	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=exon:HG002_chrY_T0001875:14;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24085473	24085544	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001875:14;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24085545	24087856	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=intron:HG002_chrY_T0001875:14;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24087857	24087928	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=exon:HG002_chrY_T0001875:15;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24087857	24087928	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001875:15;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24087929	24088673	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=intron:HG002_chrY_T0001875:15;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24088674	24088708	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=exon:HG002_chrY_T0001875:16;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24088674	24088708	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001875:16;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24088709	24093280	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=intron:HG002_chrY_T0001875:16;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24093281	24093379	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=exon:HG002_chrY_T0001875:17;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24093281	24093344	.	+	1	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001875:17;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	24093342	24093344	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=stop_codon:HG002_chrY_T0001875;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24093380	24097352	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=intron:HG002_chrY_T0001875:17;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24097353	24099209	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001875;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001875;transcript_name=HG002_chrY_T0001875;gene_name=DAZ4;ID=exon:HG002_chrY_T0001875:18;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24046488	24097560	100	+	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_G0000644;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=HG002_chrY_T0001876;Name=DAZ4
HG002_chrY	CAT	exon	24046488	24046677	.	+	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=exon:HG002_chrY_T0001876:0;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24046675	24046677	.	+	0	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001876:0;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	24046675	24046677	.	+	0	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=start_codon:HG002_chrY_T0001876;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24046678	24056532	.	+	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=intron:HG002_chrY_T0001876:0;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24056533	24056604	.	+	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=exon:HG002_chrY_T0001876:1;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24056533	24056604	.	+	0	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001876:1;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24056605	24058975	.	+	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=intron:HG002_chrY_T0001876:1;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24058976	24059047	.	+	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=exon:HG002_chrY_T0001876:2;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24058976	24059047	.	+	0	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001876:2;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24059048	24061365	.	+	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=intron:HG002_chrY_T0001876:2;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24061366	24061437	.	+	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=exon:HG002_chrY_T0001876:3;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24061366	24061437	.	+	0	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001876:3;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24061438	24063761	.	+	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=intron:HG002_chrY_T0001876:3;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24063762	24063833	.	+	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=exon:HG002_chrY_T0001876:4;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24063762	24063833	.	+	0	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001876:4;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24063834	24075935	.	+	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=intron:HG002_chrY_T0001876:4;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24075936	24076007	.	+	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=exon:HG002_chrY_T0001876:5;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24075936	24076007	.	+	0	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001876:5;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24076008	24078320	.	+	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=intron:HG002_chrY_T0001876:5;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24078321	24078392	.	+	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=exon:HG002_chrY_T0001876:6;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24078321	24078392	.	+	0	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001876:6;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24078393	24087856	.	+	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=intron:HG002_chrY_T0001876:6;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24087857	24087928	.	+	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=exon:HG002_chrY_T0001876:7;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24087857	24087928	.	+	0	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001876:7;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24087929	24088673	.	+	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=intron:HG002_chrY_T0001876:7;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24088674	24088708	.	+	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=exon:HG002_chrY_T0001876:8;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24088674	24088708	.	+	0	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001876:8;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24088709	24093280	.	+	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=intron:HG002_chrY_T0001876:8;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24093281	24093379	.	+	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=exon:HG002_chrY_T0001876:9;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24093281	24093344	.	+	1	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001876:9;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	24093342	24093344	.	+	0	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=stop_codon:HG002_chrY_T0001876;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24093380	24097352	.	+	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=intron:HG002_chrY_T0001876:9;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24097353	24097560	.	+	.	source_transcript=ENST00000440066.6;source_transcript_name=DAZ4-205;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440066.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000440066.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001876;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001876;transcript_name=HG002_chrY_T0001876;gene_name=DAZ4;ID=exon:HG002_chrY_T0001876:10;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24046675	24097409	100	+	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_G0000644;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=HG002_chrY_T0001877;Name=DAZ4
HG002_chrY	CAT	exon	24046675	24046677	.	+	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=exon:HG002_chrY_T0001877:0;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24046675	24046677	.	+	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001877:0;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	24046675	24046677	.	+	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=start_codon:HG002_chrY_T0001877;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24046678	24053278	.	+	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=intron:HG002_chrY_T0001877:0;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24053279	24053425	.	+	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=exon:HG002_chrY_T0001877:1;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24053279	24053425	.	+	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001877:1;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24053426	24053699	.	+	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=intron:HG002_chrY_T0001877:1;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24053700	24053791	.	+	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=exon:HG002_chrY_T0001877:2;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24053700	24053791	.	+	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001877:2;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24053792	24054351	.	+	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=intron:HG002_chrY_T0001877:2;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24054352	24054403	.	+	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=exon:HG002_chrY_T0001877:3;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24054352	24054403	.	+	1	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001877:3;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24054404	24054839	.	+	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=intron:HG002_chrY_T0001877:3;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24054840	24054903	.	+	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=exon:HG002_chrY_T0001877:4;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24054840	24054903	.	+	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001877:4;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24054904	24054992	.	+	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=intron:HG002_chrY_T0001877:4;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24054993	24055132	.	+	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=exon:HG002_chrY_T0001877:5;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24054993	24055132	.	+	2	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001877:5;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24055133	24056532	.	+	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=intron:HG002_chrY_T0001877:5;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24056533	24056604	.	+	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=exon:HG002_chrY_T0001877:6;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24056533	24056604	.	+	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001877:6;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24056605	24058975	.	+	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=intron:HG002_chrY_T0001877:6;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24058976	24059047	.	+	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=exon:HG002_chrY_T0001877:7;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24058976	24059047	.	+	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001877:7;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24059048	24061365	.	+	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=intron:HG002_chrY_T0001877:7;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24061366	24061437	.	+	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=exon:HG002_chrY_T0001877:8;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24061366	24061437	.	+	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001877:8;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24061438	24063761	.	+	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=intron:HG002_chrY_T0001877:8;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24063762	24063833	.	+	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=exon:HG002_chrY_T0001877:9;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24063762	24063833	.	+	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001877:9;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24063834	24085472	.	+	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=intron:HG002_chrY_T0001877:9;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24085473	24085544	.	+	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=exon:HG002_chrY_T0001877:10;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24085473	24085544	.	+	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001877:10;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24085545	24087856	.	+	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=intron:HG002_chrY_T0001877:10;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24087857	24087928	.	+	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=exon:HG002_chrY_T0001877:11;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24087857	24087928	.	+	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001877:11;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24087929	24088673	.	+	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=intron:HG002_chrY_T0001877:11;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24088674	24088708	.	+	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=exon:HG002_chrY_T0001877:12;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24088674	24088708	.	+	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001877:12;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24088709	24093280	.	+	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=intron:HG002_chrY_T0001877:12;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24093281	24093379	.	+	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=exon:HG002_chrY_T0001877:13;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24093281	24093344	.	+	1	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001877:13;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	24093342	24093344	.	+	0	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=stop_codon:HG002_chrY_T0001877;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24093380	24097352	.	+	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=intron:HG002_chrY_T0001877:13;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24097353	24097409	.	+	.	source_transcript=ENST00000634662.1;source_transcript_name=DAZ4-207;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000634662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634662.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001877;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001877;transcript_name=HG002_chrY_T0001877;gene_name=DAZ4;ID=exon:HG002_chrY_T0001877:14;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24046675	24097409	100	+	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_G0000644;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=HG002_chrY_T0001878;Name=DAZ4
HG002_chrY	CAT	exon	24046675	24046677	.	+	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=exon:HG002_chrY_T0001878:0;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24046675	24046677	.	+	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001878:0;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	24046675	24046677	.	+	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=start_codon:HG002_chrY_T0001878;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24046678	24053278	.	+	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=intron:HG002_chrY_T0001878:0;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24053279	24053425	.	+	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=exon:HG002_chrY_T0001878:1;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24053279	24053425	.	+	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001878:1;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24053426	24053699	.	+	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=intron:HG002_chrY_T0001878:1;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24053700	24053791	.	+	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=exon:HG002_chrY_T0001878:2;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24053700	24053791	.	+	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001878:2;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24053792	24054351	.	+	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=intron:HG002_chrY_T0001878:2;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24054352	24054403	.	+	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=exon:HG002_chrY_T0001878:3;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24054352	24054403	.	+	1	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001878:3;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24054404	24054839	.	+	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=intron:HG002_chrY_T0001878:3;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24054840	24054903	.	+	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=exon:HG002_chrY_T0001878:4;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24054840	24054903	.	+	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001878:4;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24054904	24054992	.	+	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=intron:HG002_chrY_T0001878:4;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24054993	24055132	.	+	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=exon:HG002_chrY_T0001878:5;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24054993	24055132	.	+	2	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001878:5;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24055133	24056532	.	+	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=intron:HG002_chrY_T0001878:5;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24056533	24056604	.	+	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=exon:HG002_chrY_T0001878:6;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24056533	24056604	.	+	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001878:6;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24056605	24058975	.	+	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=intron:HG002_chrY_T0001878:6;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24058976	24059047	.	+	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=exon:HG002_chrY_T0001878:7;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24058976	24059047	.	+	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001878:7;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24059048	24061365	.	+	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=intron:HG002_chrY_T0001878:7;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24061366	24061437	.	+	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=exon:HG002_chrY_T0001878:8;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24061366	24061437	.	+	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001878:8;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24061438	24063761	.	+	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=intron:HG002_chrY_T0001878:8;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24063762	24063833	.	+	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=exon:HG002_chrY_T0001878:9;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24063762	24063833	.	+	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001878:9;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24063834	24075935	.	+	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=intron:HG002_chrY_T0001878:9;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24075936	24076007	.	+	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=exon:HG002_chrY_T0001878:10;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24075936	24076007	.	+	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001878:10;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24076008	24085472	.	+	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=intron:HG002_chrY_T0001878:10;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24085473	24085544	.	+	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=exon:HG002_chrY_T0001878:11;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24085473	24085544	.	+	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001878:11;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24085545	24087856	.	+	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=intron:HG002_chrY_T0001878:11;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24087857	24087928	.	+	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=exon:HG002_chrY_T0001878:12;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24087857	24087928	.	+	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001878:12;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24087929	24088673	.	+	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=intron:HG002_chrY_T0001878:12;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24088674	24088708	.	+	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=exon:HG002_chrY_T0001878:13;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24088674	24088708	.	+	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001878:13;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24088709	24093280	.	+	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=intron:HG002_chrY_T0001878:13;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24093281	24093379	.	+	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=exon:HG002_chrY_T0001878:14;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24093281	24093344	.	+	1	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=CDS:HG002_chrY_T0001878:14;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	24093342	24093344	.	+	0	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=stop_codon:HG002_chrY_T0001878;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24093380	24097352	.	+	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=intron:HG002_chrY_T0001878:14;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24097353	24097409	.	+	.	source_transcript=ENST00000382296.4;source_transcript_name=DAZ4-201;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382296.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382296.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG002_chrY_T0001878;gene_id=HG002_chrY_G0000644;Parent=HG002_chrY_T0001878;transcript_name=HG002_chrY_T0001878;gene_name=DAZ4;ID=exon:HG002_chrY_T0001878:15;Name=DAZ4;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24169354	24170499	.	-	.	source_gene_common_name=ENSG00000278602;source_gene=ENSG00000278602.1;gene_id=HG002_chrY_G0000645;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000278602;gene_sources=liftoff;ID=HG002_chrY_G0000645;Name=ENSG00000278602
HG002_chrY	CAT	transcript	24169354	24170499	1000	-	.	source_transcript=ENST00000616864.1;source_transcript_name=ENST00000616864;source_gene=ENSG00000278602.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278602.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000616864.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616864.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278602;transcript_id=HG002_chrY_T0001879;gene_id=HG002_chrY_G0000645;Parent=HG002_chrY_G0000645;transcript_name=HG002_chrY_T0001879;gene_name=ENSG00000278602;ID=HG002_chrY_T0001879;Name=ENSG00000278602
HG002_chrY	CAT	exon	24169354	24169877	.	-	.	source_transcript=ENST00000616864.1;source_transcript_name=ENST00000616864;source_gene=ENSG00000278602.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278602.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000616864.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616864.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278602;transcript_id=HG002_chrY_T0001879;gene_id=HG002_chrY_G0000645;Parent=HG002_chrY_T0001879;transcript_name=HG002_chrY_T0001879;gene_name=ENSG00000278602;ID=exon:HG002_chrY_T0001879:0;Name=ENSG00000278602;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24169878	24170232	.	-	.	source_transcript=ENST00000616864.1;source_transcript_name=ENST00000616864;source_gene=ENSG00000278602.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278602.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000616864.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616864.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278602;transcript_id=HG002_chrY_T0001879;gene_id=HG002_chrY_G0000645;Parent=HG002_chrY_T0001879;transcript_name=HG002_chrY_T0001879;gene_name=ENSG00000278602;ID=intron:HG002_chrY_T0001879:0;Name=ENSG00000278602;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24170233	24170499	.	-	.	source_transcript=ENST00000616864.1;source_transcript_name=ENST00000616864;source_gene=ENSG00000278602.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278602.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000616864.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616864.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278602;transcript_id=HG002_chrY_T0001879;gene_id=HG002_chrY_G0000645;Parent=HG002_chrY_T0001879;transcript_name=HG002_chrY_T0001879;gene_name=ENSG00000278602;ID=exon:HG002_chrY_T0001879:1;Name=ENSG00000278602;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24177383	24178658	.	-	.	source_gene_common_name=ZNF736P1Y;source_gene=ENSG00000223978.1;gene_id=HG002_chrY_G0000646;gene_biotype=processed_pseudogene;gene_name=ZNF736P1Y;gene_sources=liftoff;ID=HG002_chrY_G0000646;Name=ZNF736P1Y
HG002_chrY	CAT	transcript	24177383	24178658	1000	-	.	source_transcript=ENST00000440402.1;source_transcript_name=ZNF736P1Y-201;source_gene=ENSG00000223978.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223978.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000440402.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440402.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P1Y;transcript_id=HG002_chrY_T0001880;gene_id=HG002_chrY_G0000646;Parent=HG002_chrY_G0000646;transcript_name=HG002_chrY_T0001880;gene_name=ZNF736P1Y;ID=HG002_chrY_T0001880;Name=ZNF736P1Y
HG002_chrY	CAT	exon	24177383	24178658	.	-	.	source_transcript=ENST00000440402.1;source_transcript_name=ZNF736P1Y-201;source_gene=ENSG00000223978.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223978.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000440402.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440402.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P1Y;transcript_id=HG002_chrY_T0001880;gene_id=HG002_chrY_G0000646;Parent=HG002_chrY_T0001880;transcript_name=HG002_chrY_T0001880;gene_name=ZNF736P1Y;ID=exon:HG002_chrY_T0001880:0;Name=ZNF736P1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24201881	24202950	.	-	.	source_gene_common_name=ENSG00000278197;source_gene=ENSG00000278197.1;gene_id=HG002_chrY_G0000647;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000278197;gene_sources=liftoff;ID=HG002_chrY_G0000647;Name=ENSG00000278197
HG002_chrY	CAT	transcript	24201881	24202950	1000	-	.	source_transcript=ENST00000618453.1;source_transcript_name=ENST00000618453;source_gene=ENSG00000278197.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278197.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000618453.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618453.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278197;transcript_id=HG002_chrY_T0001881;gene_id=HG002_chrY_G0000647;Parent=HG002_chrY_G0000647;transcript_name=HG002_chrY_T0001881;gene_name=ENSG00000278197;ID=HG002_chrY_T0001881;Name=ENSG00000278197
HG002_chrY	CAT	exon	24201881	24202402	.	-	.	source_transcript=ENST00000618453.1;source_transcript_name=ENST00000618453;source_gene=ENSG00000278197.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278197.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000618453.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278197;transcript_id=HG002_chrY_T0001881;gene_id=HG002_chrY_G0000647;Parent=HG002_chrY_T0001881;transcript_name=HG002_chrY_T0001881;gene_name=ENSG00000278197;ID=exon:HG002_chrY_T0001881:0;Name=ENSG00000278197;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24202403	24202723	.	-	.	source_transcript=ENST00000618453.1;source_transcript_name=ENST00000618453;source_gene=ENSG00000278197.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278197.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000618453.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278197;transcript_id=HG002_chrY_T0001881;gene_id=HG002_chrY_G0000647;Parent=HG002_chrY_T0001881;transcript_name=HG002_chrY_T0001881;gene_name=ENSG00000278197;ID=intron:HG002_chrY_T0001881:0;Name=ENSG00000278197;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24202724	24202950	.	-	.	source_transcript=ENST00000618453.1;source_transcript_name=ENST00000618453;source_gene=ENSG00000278197.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278197.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000618453.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278197;transcript_id=HG002_chrY_T0001881;gene_id=HG002_chrY_G0000647;Parent=HG002_chrY_T0001881;transcript_name=HG002_chrY_T0001881;gene_name=ENSG00000278197;ID=exon:HG002_chrY_T0001881:1;Name=ENSG00000278197;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24210726	24211484	.	-	.	source_gene_common_name=ENSG00000244000;source_gene=ENSG00000244000.1;gene_id=HG002_chrY_G0000648;gene_biotype=processed_pseudogene;gene_name=ENSG00000244000;gene_sources=liftoff;ID=HG002_chrY_G0000648;Name=ENSG00000244000
HG002_chrY	CAT	transcript	24210726	24211484	1000	-	.	source_transcript=ENST00000422002.1;source_transcript_name=ENST00000422002;source_gene=ENSG00000244000.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000244000.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422002.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000244000;transcript_id=HG002_chrY_T0001882;gene_id=HG002_chrY_G0000648;Parent=HG002_chrY_G0000648;transcript_name=HG002_chrY_T0001882;gene_name=ENSG00000244000;ID=HG002_chrY_T0001882;Name=ENSG00000244000
HG002_chrY	CAT	exon	24210726	24211484	.	-	.	source_transcript=ENST00000422002.1;source_transcript_name=ENST00000422002;source_gene=ENSG00000244000.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000244000.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422002.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000244000;transcript_id=HG002_chrY_T0001882;gene_id=HG002_chrY_G0000648;Parent=HG002_chrY_T0001882;transcript_name=HG002_chrY_T0001882;gene_name=ENSG00000244000;ID=exon:HG002_chrY_T0001882:0;Name=ENSG00000244000;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24223081	24254728	.	-	.	source_gene_common_name=BPY2B;source_gene=ENSG00000183795.8;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;gene_id=HG002_chrY_G0000649;gene_biotype=protein_coding;gene_name=BPY2B;gene_sources=liftoff;ID=HG002_chrY_G0000649;Name=BPY2B
HG002_chrY	CAT	transcript	24223081	24244284	100	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG002_chrY_T0001883;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_G0000649;transcript_name=HG002_chrY_T0001883;gene_name=BPY2B;ID=HG002_chrY_T0001883;Name=BPY2B
HG002_chrY	CAT	exon	24223081	24223402	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG002_chrY_T0001883;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001883;transcript_name=HG002_chrY_T0001883;gene_name=BPY2B;ID=exon:HG002_chrY_T0001883:0;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24223403	24223496	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG002_chrY_T0001883;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001883;transcript_name=HG002_chrY_T0001883;gene_name=BPY2B;ID=intron:HG002_chrY_T0001883:0;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24223497	24223621	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG002_chrY_T0001883;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001883;transcript_name=HG002_chrY_T0001883;gene_name=BPY2B;ID=exon:HG002_chrY_T0001883:1;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24223622	24230171	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG002_chrY_T0001883;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001883;transcript_name=HG002_chrY_T0001883;gene_name=BPY2B;ID=intron:HG002_chrY_T0001883:1;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24230172	24230296	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG002_chrY_T0001883;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001883;transcript_name=HG002_chrY_T0001883;gene_name=BPY2B;ID=exon:HG002_chrY_T0001883:2;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24230278	24230296	.	-	1	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG002_chrY_T0001883;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001883;transcript_name=HG002_chrY_T0001883;gene_name=BPY2B;ID=CDS:HG002_chrY_T0001883:0;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	24230278	24230280	.	-	0	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG002_chrY_T0001883;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001883;transcript_name=HG002_chrY_T0001883;gene_name=BPY2B;ID=stop_codon:HG002_chrY_T0001883;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24230297	24230988	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG002_chrY_T0001883;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001883;transcript_name=HG002_chrY_T0001883;gene_name=BPY2B;ID=intron:HG002_chrY_T0001883:2;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24230989	24231094	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG002_chrY_T0001883;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001883;transcript_name=HG002_chrY_T0001883;gene_name=BPY2B;ID=exon:HG002_chrY_T0001883:3;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24230989	24231094	.	-	2	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG002_chrY_T0001883;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001883;transcript_name=HG002_chrY_T0001883;gene_name=BPY2B;ID=CDS:HG002_chrY_T0001883:1;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24231095	24233948	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG002_chrY_T0001883;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001883;transcript_name=HG002_chrY_T0001883;gene_name=BPY2B;ID=intron:HG002_chrY_T0001883:3;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24233949	24234066	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG002_chrY_T0001883;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001883;transcript_name=HG002_chrY_T0001883;gene_name=BPY2B;ID=exon:HG002_chrY_T0001883:4;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24233949	24234066	.	-	0	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG002_chrY_T0001883;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001883;transcript_name=HG002_chrY_T0001883;gene_name=BPY2B;ID=CDS:HG002_chrY_T0001883:2;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24234067	24236125	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG002_chrY_T0001883;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001883;transcript_name=HG002_chrY_T0001883;gene_name=BPY2B;ID=intron:HG002_chrY_T0001883:4;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24236126	24236244	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG002_chrY_T0001883;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001883;transcript_name=HG002_chrY_T0001883;gene_name=BPY2B;ID=exon:HG002_chrY_T0001883:5;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24236126	24236203	.	-	0	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG002_chrY_T0001883;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001883;transcript_name=HG002_chrY_T0001883;gene_name=BPY2B;ID=CDS:HG002_chrY_T0001883:3;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	24236201	24236203	.	-	0	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG002_chrY_T0001883;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001883;transcript_name=HG002_chrY_T0001883;gene_name=BPY2B;ID=start_codon:HG002_chrY_T0001883;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24236245	24240653	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG002_chrY_T0001883;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001883;transcript_name=HG002_chrY_T0001883;gene_name=BPY2B;ID=intron:HG002_chrY_T0001883:5;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24240654	24240790	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG002_chrY_T0001883;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001883;transcript_name=HG002_chrY_T0001883;gene_name=BPY2B;ID=exon:HG002_chrY_T0001883:6;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24240791	24243855	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG002_chrY_T0001883;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001883;transcript_name=HG002_chrY_T0001883;gene_name=BPY2B;ID=intron:HG002_chrY_T0001883:6;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24243856	24243978	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG002_chrY_T0001883;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001883;transcript_name=HG002_chrY_T0001883;gene_name=BPY2B;ID=exon:HG002_chrY_T0001883:7;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24243979	24244253	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG002_chrY_T0001883;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001883;transcript_name=HG002_chrY_T0001883;gene_name=BPY2B;ID=intron:HG002_chrY_T0001883:7;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24244254	24244284	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=HG002_chrY_T0001883;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001883;transcript_name=HG002_chrY_T0001883;gene_name=BPY2B;ID=exon:HG002_chrY_T0001883:8;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24223140	24244260	1000	-	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=HG002_chrY_T0001884;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_G0000649;transcript_name=HG002_chrY_T0001884;gene_name=BPY2B;ID=HG002_chrY_T0001884;Name=BPY2B
HG002_chrY	CAT	exon	24223140	24223402	.	-	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=HG002_chrY_T0001884;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001884;transcript_name=HG002_chrY_T0001884;gene_name=BPY2B;ID=exon:HG002_chrY_T0001884:0;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24223403	24223491	.	-	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=HG002_chrY_T0001884;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001884;transcript_name=HG002_chrY_T0001884;gene_name=BPY2B;ID=intron:HG002_chrY_T0001884:0;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24223492	24223621	.	-	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=HG002_chrY_T0001884;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001884;transcript_name=HG002_chrY_T0001884;gene_name=BPY2B;ID=exon:HG002_chrY_T0001884:1;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24223622	24230171	.	-	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=HG002_chrY_T0001884;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001884;transcript_name=HG002_chrY_T0001884;gene_name=BPY2B;ID=intron:HG002_chrY_T0001884:1;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24230172	24230296	.	-	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=HG002_chrY_T0001884;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001884;transcript_name=HG002_chrY_T0001884;gene_name=BPY2B;ID=exon:HG002_chrY_T0001884:2;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24230297	24230988	.	-	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=HG002_chrY_T0001884;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001884;transcript_name=HG002_chrY_T0001884;gene_name=BPY2B;ID=intron:HG002_chrY_T0001884:2;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24230989	24231094	.	-	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=HG002_chrY_T0001884;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001884;transcript_name=HG002_chrY_T0001884;gene_name=BPY2B;ID=exon:HG002_chrY_T0001884:3;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24231095	24236125	.	-	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=HG002_chrY_T0001884;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001884;transcript_name=HG002_chrY_T0001884;gene_name=BPY2B;ID=intron:HG002_chrY_T0001884:3;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24236126	24236244	.	-	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=HG002_chrY_T0001884;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001884;transcript_name=HG002_chrY_T0001884;gene_name=BPY2B;ID=exon:HG002_chrY_T0001884:4;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24236245	24240653	.	-	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=HG002_chrY_T0001884;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001884;transcript_name=HG002_chrY_T0001884;gene_name=BPY2B;ID=intron:HG002_chrY_T0001884:4;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24240654	24240790	.	-	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=HG002_chrY_T0001884;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001884;transcript_name=HG002_chrY_T0001884;gene_name=BPY2B;ID=exon:HG002_chrY_T0001884:5;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24240791	24243855	.	-	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=HG002_chrY_T0001884;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001884;transcript_name=HG002_chrY_T0001884;gene_name=BPY2B;ID=intron:HG002_chrY_T0001884:5;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24243856	24243978	.	-	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=HG002_chrY_T0001884;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001884;transcript_name=HG002_chrY_T0001884;gene_name=BPY2B;ID=exon:HG002_chrY_T0001884:6;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24243979	24244253	.	-	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=HG002_chrY_T0001884;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001884;transcript_name=HG002_chrY_T0001884;gene_name=BPY2B;ID=intron:HG002_chrY_T0001884:6;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24244254	24244260	.	-	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=HG002_chrY_T0001884;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001884;transcript_name=HG002_chrY_T0001884;gene_name=BPY2B;ID=exon:HG002_chrY_T0001884:7;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24230278	24236203	100	-	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=HG002_chrY_T0001885;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_G0000649;transcript_name=HG002_chrY_T0001885;gene_name=BPY2B;ID=HG002_chrY_T0001885;Name=BPY2B
HG002_chrY	CAT	exon	24230278	24230296	.	-	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=HG002_chrY_T0001885;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001885;transcript_name=HG002_chrY_T0001885;gene_name=BPY2B;ID=exon:HG002_chrY_T0001885:0;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24230278	24230296	.	-	1	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=HG002_chrY_T0001885;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001885;transcript_name=HG002_chrY_T0001885;gene_name=BPY2B;ID=CDS:HG002_chrY_T0001885:0;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	24230278	24230280	.	-	0	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=HG002_chrY_T0001885;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001885;transcript_name=HG002_chrY_T0001885;gene_name=BPY2B;ID=stop_codon:HG002_chrY_T0001885;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24230297	24230988	.	-	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=HG002_chrY_T0001885;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001885;transcript_name=HG002_chrY_T0001885;gene_name=BPY2B;ID=intron:HG002_chrY_T0001885:0;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24230989	24231094	.	-	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=HG002_chrY_T0001885;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001885;transcript_name=HG002_chrY_T0001885;gene_name=BPY2B;ID=exon:HG002_chrY_T0001885:1;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24230989	24231094	.	-	2	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=HG002_chrY_T0001885;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001885;transcript_name=HG002_chrY_T0001885;gene_name=BPY2B;ID=CDS:HG002_chrY_T0001885:1;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24231095	24233948	.	-	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=HG002_chrY_T0001885;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001885;transcript_name=HG002_chrY_T0001885;gene_name=BPY2B;ID=intron:HG002_chrY_T0001885:1;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24233949	24234066	.	-	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=HG002_chrY_T0001885;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001885;transcript_name=HG002_chrY_T0001885;gene_name=BPY2B;ID=exon:HG002_chrY_T0001885:2;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24233949	24234066	.	-	0	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=HG002_chrY_T0001885;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001885;transcript_name=HG002_chrY_T0001885;gene_name=BPY2B;ID=CDS:HG002_chrY_T0001885:2;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24234067	24236125	.	-	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=HG002_chrY_T0001885;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001885;transcript_name=HG002_chrY_T0001885;gene_name=BPY2B;ID=intron:HG002_chrY_T0001885:2;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24236126	24236203	.	-	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=HG002_chrY_T0001885;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001885;transcript_name=HG002_chrY_T0001885;gene_name=BPY2B;ID=exon:HG002_chrY_T0001885:3;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24236126	24236203	.	-	0	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=HG002_chrY_T0001885;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001885;transcript_name=HG002_chrY_T0001885;gene_name=BPY2B;ID=CDS:HG002_chrY_T0001885:3;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	24236201	24236203	.	-	0	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=HG002_chrY_T0001885;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001885;transcript_name=HG002_chrY_T0001885;gene_name=BPY2B;ID=start_codon:HG002_chrY_T0001885;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24236171	24254728	100	-	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=HG002_chrY_T0001886;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_G0000649;transcript_name=HG002_chrY_T0001886;gene_name=BPY2B;ID=HG002_chrY_T0001886;Name=BPY2B
HG002_chrY	CAT	exon	24236171	24236244	.	-	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=HG002_chrY_T0001886;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001886;transcript_name=HG002_chrY_T0001886;gene_name=BPY2B;ID=exon:HG002_chrY_T0001886:0;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24236171	24236203	.	-	0	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=HG002_chrY_T0001886;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001886;transcript_name=HG002_chrY_T0001886;gene_name=BPY2B;ID=CDS:HG002_chrY_T0001886:0;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	24236171	24236173	.	-	0	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=HG002_chrY_T0001886;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001886;transcript_name=HG002_chrY_T0001886;gene_name=BPY2B;ID=stop_codon:HG002_chrY_T0001886;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	24236201	24236203	.	-	0	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=HG002_chrY_T0001886;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001886;transcript_name=HG002_chrY_T0001886;gene_name=BPY2B;ID=start_codon:HG002_chrY_T0001886;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24236245	24240653	.	-	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=HG002_chrY_T0001886;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001886;transcript_name=HG002_chrY_T0001886;gene_name=BPY2B;ID=intron:HG002_chrY_T0001886:0;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24240654	24240790	.	-	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=HG002_chrY_T0001886;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001886;transcript_name=HG002_chrY_T0001886;gene_name=BPY2B;ID=exon:HG002_chrY_T0001886:1;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24240791	24243855	.	-	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=HG002_chrY_T0001886;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001886;transcript_name=HG002_chrY_T0001886;gene_name=BPY2B;ID=intron:HG002_chrY_T0001886:1;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24243856	24243978	.	-	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=HG002_chrY_T0001886;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001886;transcript_name=HG002_chrY_T0001886;gene_name=BPY2B;ID=exon:HG002_chrY_T0001886:2;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24243979	24244330	.	-	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=HG002_chrY_T0001886;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001886;transcript_name=HG002_chrY_T0001886;gene_name=BPY2B;ID=intron:HG002_chrY_T0001886:2;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24244331	24244399	.	-	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=HG002_chrY_T0001886;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001886;transcript_name=HG002_chrY_T0001886;gene_name=BPY2B;ID=exon:HG002_chrY_T0001886:3;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24244400	24254572	.	-	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=HG002_chrY_T0001886;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001886;transcript_name=HG002_chrY_T0001886;gene_name=BPY2B;ID=intron:HG002_chrY_T0001886:3;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24254573	24254728	.	-	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=HG002_chrY_T0001886;gene_id=HG002_chrY_G0000649;Parent=HG002_chrY_T0001886;transcript_name=HG002_chrY_T0001886;gene_name=BPY2B;ID=exon:HG002_chrY_T0001886:4;Name=BPY2B;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24255263	24292062	.	-	.	source_gene_common_name=TTTY4B;source_gene=ENSG00000235412.1;alternative_source_transcripts=ENST00000420149.1;gene_id=HG002_chrY_G0000650;gene_biotype=lncRNA;gene_name=TTTY4B;gene_sources=liftoff;ID=HG002_chrY_G0000650;Name=TTTY4B
HG002_chrY	CAT	transcript	24255263	24292062	1000	-	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000420149.1;transcript_id=HG002_chrY_T0001887;gene_id=HG002_chrY_G0000650;Parent=HG002_chrY_G0000650;transcript_name=HG002_chrY_T0001887;gene_name=TTTY4B;ID=HG002_chrY_T0001887;Name=TTTY4B
HG002_chrY	CAT	exon	24255263	24256263	.	-	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000420149.1;transcript_id=HG002_chrY_T0001887;gene_id=HG002_chrY_G0000650;Parent=HG002_chrY_T0001887;transcript_name=HG002_chrY_T0001887;gene_name=TTTY4B;ID=exon:HG002_chrY_T0001887:0;Name=TTTY4B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24256264	24262913	.	-	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000420149.1;transcript_id=HG002_chrY_T0001887;gene_id=HG002_chrY_G0000650;Parent=HG002_chrY_T0001887;transcript_name=HG002_chrY_T0001887;gene_name=TTTY4B;ID=intron:HG002_chrY_T0001887:0;Name=TTTY4B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24262914	24263021	.	-	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000420149.1;transcript_id=HG002_chrY_T0001887;gene_id=HG002_chrY_G0000650;Parent=HG002_chrY_T0001887;transcript_name=HG002_chrY_T0001887;gene_name=TTTY4B;ID=exon:HG002_chrY_T0001887:1;Name=TTTY4B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24263022	24264825	.	-	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000420149.1;transcript_id=HG002_chrY_T0001887;gene_id=HG002_chrY_G0000650;Parent=HG002_chrY_T0001887;transcript_name=HG002_chrY_T0001887;gene_name=TTTY4B;ID=intron:HG002_chrY_T0001887:1;Name=TTTY4B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24264826	24264901	.	-	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000420149.1;transcript_id=HG002_chrY_T0001887;gene_id=HG002_chrY_G0000650;Parent=HG002_chrY_T0001887;transcript_name=HG002_chrY_T0001887;gene_name=TTTY4B;ID=exon:HG002_chrY_T0001887:2;Name=TTTY4B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24264902	24291901	.	-	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000420149.1;transcript_id=HG002_chrY_T0001887;gene_id=HG002_chrY_G0000650;Parent=HG002_chrY_T0001887;transcript_name=HG002_chrY_T0001887;gene_name=TTTY4B;ID=intron:HG002_chrY_T0001887:2;Name=TTTY4B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24291902	24292062	.	-	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000420149.1;transcript_id=HG002_chrY_T0001887;gene_id=HG002_chrY_G0000650;Parent=HG002_chrY_T0001887;transcript_name=HG002_chrY_T0001887;gene_name=TTTY4B;ID=exon:HG002_chrY_T0001887:3;Name=TTTY4B;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24360763	24362005	.	+	.	source_gene_common_name=ZNF736P12Y;source_gene=ENSG00000232003.2;alternative_source_transcripts=ENST00000443152.1;gene_id=HG002_chrY_G0000651;gene_biotype=processed_pseudogene;gene_name=ZNF736P12Y;gene_sources=liftoff;ID=HG002_chrY_G0000651;Name=ZNF736P12Y
HG002_chrY	CAT	transcript	24360763	24362005	1000	+	.	source_transcript=ENST00000443152.1;source_transcript_name=ZNF736P12Y-201;source_gene=ENSG00000232003.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232003.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000443152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443152.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P12Y;alternative_source_transcripts=ENST00000443152.1;transcript_id=HG002_chrY_T0001888;gene_id=HG002_chrY_G0000651;Parent=HG002_chrY_G0000651;transcript_name=HG002_chrY_T0001888;gene_name=ZNF736P12Y;ID=HG002_chrY_T0001888;Name=ZNF736P12Y
HG002_chrY	CAT	exon	24360763	24362005	.	+	.	source_transcript=ENST00000443152.1;source_transcript_name=ZNF736P12Y-201;source_gene=ENSG00000232003.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232003.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000443152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443152.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P12Y;alternative_source_transcripts=ENST00000443152.1;transcript_id=HG002_chrY_T0001888;gene_id=HG002_chrY_G0000651;Parent=HG002_chrY_T0001888;transcript_name=HG002_chrY_T0001888;gene_name=ZNF736P12Y;ID=exon:HG002_chrY_T0001888:0;Name=ZNF736P12Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24366686	24367408	.	+	.	source_gene_common_name=ENSG00000276829;source_gene=ENSG00000276829.1;alternative_source_transcripts=ENST00000613297.1;gene_id=HG002_chrY_G0000652;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000276829;gene_sources=liftoff;ID=HG002_chrY_G0000652;Name=ENSG00000276829
HG002_chrY	CAT	transcript	24366686	24367408	1000	+	.	source_transcript=ENST00000613297.1;source_transcript_name=ENST00000613297;source_gene=ENSG00000276829.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000276829.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613297.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000276829;alternative_source_transcripts=ENST00000613297.1;transcript_id=HG002_chrY_T0001889;gene_id=HG002_chrY_G0000652;Parent=HG002_chrY_G0000652;transcript_name=HG002_chrY_T0001889;gene_name=ENSG00000276829;ID=HG002_chrY_T0001889;Name=ENSG00000276829
HG002_chrY	CAT	exon	24366686	24366976	.	+	.	source_transcript=ENST00000613297.1;source_transcript_name=ENST00000613297;source_gene=ENSG00000276829.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000276829.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000276829;alternative_source_transcripts=ENST00000613297.1;transcript_id=HG002_chrY_T0001889;gene_id=HG002_chrY_G0000652;Parent=HG002_chrY_T0001889;transcript_name=HG002_chrY_T0001889;gene_name=ENSG00000276829;ID=exon:HG002_chrY_T0001889:0;Name=ENSG00000276829;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24366977	24367247	.	+	.	source_transcript=ENST00000613297.1;source_transcript_name=ENST00000613297;source_gene=ENSG00000276829.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000276829.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000276829;alternative_source_transcripts=ENST00000613297.1;transcript_id=HG002_chrY_T0001889;gene_id=HG002_chrY_G0000652;Parent=HG002_chrY_T0001889;transcript_name=HG002_chrY_T0001889;gene_name=ENSG00000276829;ID=intron:HG002_chrY_T0001889:0;Name=ENSG00000276829;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24367248	24367408	.	+	.	source_transcript=ENST00000613297.1;source_transcript_name=ENST00000613297;source_gene=ENSG00000276829.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000276829.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000276829;alternative_source_transcripts=ENST00000613297.1;transcript_id=HG002_chrY_T0001889;gene_id=HG002_chrY_G0000652;Parent=HG002_chrY_T0001889;transcript_name=HG002_chrY_T0001889;gene_name=ENSG00000276829;ID=exon:HG002_chrY_T0001889:1;Name=ENSG00000276829;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24375806	24376938	.	-	.	source_gene_common_name=TTTY17B;source_gene=ENSG00000227439.1;alternative_source_transcripts=ENST00000416110.1,ENST00000441906.1;gene_id=HG002_chrY_G0000653;gene_biotype=lncRNA;gene_name=TTTY17B;gene_sources=liftoff;ID=HG002_chrY_G0000653;Name=TTTY17B
HG002_chrY	CAT	transcript	24375806	24376938	1000	-	.	source_transcript=ENST00000441906.1;source_transcript_name=TTTY17B-201;source_gene=ENSG00000227439.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000227439.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441906.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441906.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=ENST00000416110.1,ENST00000441906.1;transcript_id=HG002_chrY_T0001890;gene_id=HG002_chrY_G0000653;Parent=HG002_chrY_G0000653;transcript_name=HG002_chrY_T0001890;gene_name=TTTY17B;ID=HG002_chrY_T0001890;Name=TTTY17B
HG002_chrY	CAT	exon	24375806	24375911	.	-	.	source_transcript=ENST00000441906.1;source_transcript_name=TTTY17B-201;source_gene=ENSG00000227439.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000227439.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441906.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441906.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=ENST00000416110.1,ENST00000441906.1;transcript_id=HG002_chrY_T0001890;gene_id=HG002_chrY_G0000653;Parent=HG002_chrY_T0001890;transcript_name=HG002_chrY_T0001890;gene_name=TTTY17B;ID=exon:HG002_chrY_T0001890:0;Name=TTTY17B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24375912	24376878	.	-	.	source_transcript=ENST00000441906.1;source_transcript_name=TTTY17B-201;source_gene=ENSG00000227439.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000227439.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441906.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441906.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=ENST00000416110.1,ENST00000441906.1;transcript_id=HG002_chrY_T0001890;gene_id=HG002_chrY_G0000653;Parent=HG002_chrY_T0001890;transcript_name=HG002_chrY_T0001890;gene_name=TTTY17B;ID=intron:HG002_chrY_T0001890:0;Name=TTTY17B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24376879	24376938	.	-	.	source_transcript=ENST00000441906.1;source_transcript_name=TTTY17B-201;source_gene=ENSG00000227439.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000227439.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441906.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441906.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=ENST00000416110.1,ENST00000441906.1;transcript_id=HG002_chrY_T0001890;gene_id=HG002_chrY_G0000653;Parent=HG002_chrY_T0001890;transcript_name=HG002_chrY_T0001890;gene_name=TTTY17B;ID=exon:HG002_chrY_T0001890:1;Name=TTTY17B;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24406329	24411419	.	+	.	source_gene_common_name=ENSG00000308317;source_gene=ENSG00000308317.1;alternative_source_transcripts=ENST00000833217.1;gene_id=HG002_chrY_G0000654;gene_biotype=lncRNA;gene_name=ENSG00000308317;gene_sources=liftoff;ID=HG002_chrY_G0000654;Name=ENSG00000308317
HG002_chrY	CAT	transcript	24406329	24411419	1000	+	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;alternative_source_transcripts=ENST00000833217.1;transcript_id=HG002_chrY_T0001891;gene_id=HG002_chrY_G0000654;Parent=HG002_chrY_G0000654;transcript_name=HG002_chrY_T0001891;gene_name=ENSG00000308317;ID=HG002_chrY_T0001891;Name=ENSG00000308317
HG002_chrY	CAT	exon	24406329	24406425	.	+	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;alternative_source_transcripts=ENST00000833217.1;transcript_id=HG002_chrY_T0001891;gene_id=HG002_chrY_G0000654;Parent=HG002_chrY_T0001891;transcript_name=HG002_chrY_T0001891;gene_name=ENSG00000308317;ID=exon:HG002_chrY_T0001891:0;Name=ENSG00000308317;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24406426	24411077	.	+	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;alternative_source_transcripts=ENST00000833217.1;transcript_id=HG002_chrY_T0001891;gene_id=HG002_chrY_G0000654;Parent=HG002_chrY_T0001891;transcript_name=HG002_chrY_T0001891;gene_name=ENSG00000308317;ID=intron:HG002_chrY_T0001891:0;Name=ENSG00000308317;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24411078	24411419	.	+	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;alternative_source_transcripts=ENST00000833217.1;transcript_id=HG002_chrY_T0001891;gene_id=HG002_chrY_G0000654;Parent=HG002_chrY_T0001891;transcript_name=HG002_chrY_T0001891;gene_name=ENSG00000308317;ID=exon:HG002_chrY_T0001891:1;Name=ENSG00000308317;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24458744	24465674	.	+	.	source_gene_common_name=RBMY2XP;source_gene=ENSG00000234399.1;alternative_source_transcripts=ENST00000447471.1;gene_id=HG002_chrY_G0000655;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2XP;gene_sources=liftoff;ID=HG002_chrY_G0000655;Name=RBMY2XP
HG002_chrY	CAT	transcript	24458744	24465674	1000	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=HG002_chrY_T0001892;gene_id=HG002_chrY_G0000655;Parent=HG002_chrY_G0000655;transcript_name=HG002_chrY_T0001892;gene_name=RBMY2XP;ID=HG002_chrY_T0001892;Name=RBMY2XP
HG002_chrY	CAT	exon	24458744	24458852	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=HG002_chrY_T0001892;gene_id=HG002_chrY_G0000655;Parent=HG002_chrY_T0001892;transcript_name=HG002_chrY_T0001892;gene_name=RBMY2XP;ID=exon:HG002_chrY_T0001892:0;Name=RBMY2XP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24458853	24459268	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=HG002_chrY_T0001892;gene_id=HG002_chrY_G0000655;Parent=HG002_chrY_T0001892;transcript_name=HG002_chrY_T0001892;gene_name=RBMY2XP;ID=intron:HG002_chrY_T0001892:0;Name=RBMY2XP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24459269	24459370	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=HG002_chrY_T0001892;gene_id=HG002_chrY_G0000655;Parent=HG002_chrY_T0001892;transcript_name=HG002_chrY_T0001892;gene_name=RBMY2XP;ID=exon:HG002_chrY_T0001892:1;Name=RBMY2XP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24459371	24461758	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=HG002_chrY_T0001892;gene_id=HG002_chrY_G0000655;Parent=HG002_chrY_T0001892;transcript_name=HG002_chrY_T0001892;gene_name=RBMY2XP;ID=intron:HG002_chrY_T0001892:1;Name=RBMY2XP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24461759	24461940	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=HG002_chrY_T0001892;gene_id=HG002_chrY_G0000655;Parent=HG002_chrY_T0001892;transcript_name=HG002_chrY_T0001892;gene_name=RBMY2XP;ID=exon:HG002_chrY_T0001892:2;Name=RBMY2XP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24461941	24464676	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=HG002_chrY_T0001892;gene_id=HG002_chrY_G0000655;Parent=HG002_chrY_T0001892;transcript_name=HG002_chrY_T0001892;gene_name=RBMY2XP;ID=intron:HG002_chrY_T0001892:2;Name=RBMY2XP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24464677	24464787	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=HG002_chrY_T0001892;gene_id=HG002_chrY_G0000655;Parent=HG002_chrY_T0001892;transcript_name=HG002_chrY_T0001892;gene_name=RBMY2XP;ID=exon:HG002_chrY_T0001892:3;Name=RBMY2XP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24464788	24464868	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=HG002_chrY_T0001892;gene_id=HG002_chrY_G0000655;Parent=HG002_chrY_T0001892;transcript_name=HG002_chrY_T0001892;gene_name=RBMY2XP;ID=intron:HG002_chrY_T0001892:3;Name=RBMY2XP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24464869	24464957	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=HG002_chrY_T0001892;gene_id=HG002_chrY_G0000655;Parent=HG002_chrY_T0001892;transcript_name=HG002_chrY_T0001892;gene_name=RBMY2XP;ID=exon:HG002_chrY_T0001892:4;Name=RBMY2XP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24464958	24465372	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=HG002_chrY_T0001892;gene_id=HG002_chrY_G0000655;Parent=HG002_chrY_T0001892;transcript_name=HG002_chrY_T0001892;gene_name=RBMY2XP;ID=intron:HG002_chrY_T0001892:4;Name=RBMY2XP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24465373	24465674	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=HG002_chrY_T0001892;gene_id=HG002_chrY_G0000655;Parent=HG002_chrY_T0001892;transcript_name=HG002_chrY_T0001892;gene_name=RBMY2XP;ID=exon:HG002_chrY_T0001892:5;Name=RBMY2XP;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24499889	24499963	.	+	.	source_gene_common_name=ENSG00000279274;source_gene=ENSG00000279274.2;alternative_source_transcripts=ENST00000624575.2;gene_id=HG002_chrY_G0000656;gene_biotype=processed_pseudogene;gene_name=ENSG00000279274;gene_sources=liftoff;ID=HG002_chrY_G0000656;Name=ENSG00000279274
HG002_chrY	CAT	transcript	24499889	24499963	1000	+	.	source_transcript=ENST00000624575.2;source_transcript_name=ENST00000624575;source_gene=ENSG00000279274.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000279274.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000624575.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624575.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000279274;alternative_source_transcripts=ENST00000624575.2;transcript_id=HG002_chrY_T0001893;gene_id=HG002_chrY_G0000656;Parent=HG002_chrY_G0000656;transcript_name=HG002_chrY_T0001893;gene_name=ENSG00000279274;ID=HG002_chrY_T0001893;Name=ENSG00000279274
HG002_chrY	CAT	exon	24499889	24499963	.	+	.	source_transcript=ENST00000624575.2;source_transcript_name=ENST00000624575;source_gene=ENSG00000279274.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000279274.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000624575.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624575.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000279274;alternative_source_transcripts=ENST00000624575.2;transcript_id=HG002_chrY_T0001893;gene_id=HG002_chrY_G0000656;Parent=HG002_chrY_T0001893;transcript_name=HG002_chrY_T0001893;gene_name=ENSG00000279274;ID=exon:HG002_chrY_T0001893:0;Name=ENSG00000279274;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24540661	24549743	.	+	.	source_gene_common_name=ENSG00000306111;source_gene=ENSG00000306111.1;alternative_source_transcripts=ENST00000815376.1;gene_id=HG002_chrY_G0000657;gene_biotype=lncRNA;gene_name=ENSG00000306111;gene_sources=liftoff;ID=HG002_chrY_G0000657;Name=ENSG00000306111
HG002_chrY	CAT	transcript	24540661	24549743	1000	+	.	source_transcript=ENST00000815376.1;source_transcript_name=ENST00000815376;source_gene=ENSG00000306111.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306111.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000815376.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000815376.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306111;alternative_source_transcripts=ENST00000815376.1;transcript_id=HG002_chrY_T0001894;gene_id=HG002_chrY_G0000657;Parent=HG002_chrY_G0000657;transcript_name=HG002_chrY_T0001894;gene_name=ENSG00000306111;ID=HG002_chrY_T0001894;Name=ENSG00000306111
HG002_chrY	CAT	exon	24540661	24540834	.	+	.	source_transcript=ENST00000815376.1;source_transcript_name=ENST00000815376;source_gene=ENSG00000306111.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306111.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000815376.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000815376.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306111;alternative_source_transcripts=ENST00000815376.1;transcript_id=HG002_chrY_T0001894;gene_id=HG002_chrY_G0000657;Parent=HG002_chrY_T0001894;transcript_name=HG002_chrY_T0001894;gene_name=ENSG00000306111;ID=exon:HG002_chrY_T0001894:0;Name=ENSG00000306111;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24540835	24548650	.	+	.	source_transcript=ENST00000815376.1;source_transcript_name=ENST00000815376;source_gene=ENSG00000306111.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306111.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000815376.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000815376.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306111;alternative_source_transcripts=ENST00000815376.1;transcript_id=HG002_chrY_T0001894;gene_id=HG002_chrY_G0000657;Parent=HG002_chrY_T0001894;transcript_name=HG002_chrY_T0001894;gene_name=ENSG00000306111;ID=intron:HG002_chrY_T0001894:0;Name=ENSG00000306111;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24548651	24549743	.	+	.	source_transcript=ENST00000815376.1;source_transcript_name=ENST00000815376;source_gene=ENSG00000306111.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306111.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000815376.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000815376.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306111;alternative_source_transcripts=ENST00000815376.1;transcript_id=HG002_chrY_T0001894;gene_id=HG002_chrY_G0000657;Parent=HG002_chrY_T0001894;transcript_name=HG002_chrY_T0001894;gene_name=ENSG00000306111;ID=exon:HG002_chrY_T0001894:1;Name=ENSG00000306111;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24540738	24541518	1000	+	.	source_transcript=ENST00000815377.1;source_transcript_name=ENST00000815377;source_gene=ENSG00000306111.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306111.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000815377.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000815377.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306111;alternative_source_transcripts=ENST00000815377.1;transcript_id=HG002_chrY_T0001895;gene_id=HG002_chrY_G0000657;Parent=HG002_chrY_G0000657;transcript_name=HG002_chrY_T0001895;gene_name=ENSG00000306111;ID=HG002_chrY_T0001895;Name=ENSG00000306111
HG002_chrY	CAT	exon	24540738	24540834	.	+	.	source_transcript=ENST00000815377.1;source_transcript_name=ENST00000815377;source_gene=ENSG00000306111.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306111.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000815377.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000815377.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306111;alternative_source_transcripts=ENST00000815377.1;transcript_id=HG002_chrY_T0001895;gene_id=HG002_chrY_G0000657;Parent=HG002_chrY_T0001895;transcript_name=HG002_chrY_T0001895;gene_name=ENSG00000306111;ID=exon:HG002_chrY_T0001895:0;Name=ENSG00000306111;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24540835	24541278	.	+	.	source_transcript=ENST00000815377.1;source_transcript_name=ENST00000815377;source_gene=ENSG00000306111.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306111.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000815377.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000815377.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306111;alternative_source_transcripts=ENST00000815377.1;transcript_id=HG002_chrY_T0001895;gene_id=HG002_chrY_G0000657;Parent=HG002_chrY_T0001895;transcript_name=HG002_chrY_T0001895;gene_name=ENSG00000306111;ID=intron:HG002_chrY_T0001895:0;Name=ENSG00000306111;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24541279	24541518	.	+	.	source_transcript=ENST00000815377.1;source_transcript_name=ENST00000815377;source_gene=ENSG00000306111.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306111.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000815377.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000815377.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306111;alternative_source_transcripts=ENST00000815377.1;transcript_id=HG002_chrY_T0001895;gene_id=HG002_chrY_G0000657;Parent=HG002_chrY_T0001895;transcript_name=HG002_chrY_T0001895;gene_name=ENSG00000306111;ID=exon:HG002_chrY_T0001895:1;Name=ENSG00000306111;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24579083	24579251	.	-	.	source_gene_common_name=SEPTIN14P22;source_gene=ENSG00000248792.2;gene_id=HG002_chrY_G0000658;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=SEPTIN14P22;gene_sources=liftoff;ID=HG002_chrY_G0000658;Name=SEPTIN14P22
HG002_chrY	CAT	transcript	24579083	24579251	1000	-	.	source_transcript=ENST00000509776.2;source_transcript_name=SEPTIN14P22-201;source_gene=ENSG00000248792.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000248792.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000509776.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000509776.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P22;transcript_id=HG002_chrY_T0001896;gene_id=HG002_chrY_G0000658;Parent=HG002_chrY_G0000658;transcript_name=HG002_chrY_T0001896;gene_name=SEPTIN14P22;ID=HG002_chrY_T0001896;Name=SEPTIN14P22
HG002_chrY	CAT	exon	24579083	24579251	.	-	.	source_transcript=ENST00000509776.2;source_transcript_name=SEPTIN14P22-201;source_gene=ENSG00000248792.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000248792.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000509776.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000509776.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P22;transcript_id=HG002_chrY_T0001896;gene_id=HG002_chrY_G0000658;Parent=HG002_chrY_T0001896;transcript_name=HG002_chrY_T0001896;gene_name=SEPTIN14P22;ID=exon:HG002_chrY_T0001896:0;Name=SEPTIN14P22;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24581158	24583977	.	+	.	source_gene_common_name=CICP1;source_gene=ENSG00000233652.1;gene_id=HG002_chrY_G0000659;gene_biotype=processed_pseudogene;gene_name=CICP1;gene_sources=liftoff;ID=HG002_chrY_G0000659;Name=CICP1
HG002_chrY	CAT	transcript	24581158	24583977	1000	+	.	source_transcript=ENST00000416803.1;source_transcript_name=CICP1-201;source_gene=ENSG00000233652.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233652.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000416803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416803.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP1;transcript_id=HG002_chrY_T0001897;gene_id=HG002_chrY_G0000659;Parent=HG002_chrY_G0000659;transcript_name=HG002_chrY_T0001897;gene_name=CICP1;ID=HG002_chrY_T0001897;Name=CICP1
HG002_chrY	CAT	exon	24581158	24583440	.	+	.	source_transcript=ENST00000416803.1;source_transcript_name=CICP1-201;source_gene=ENSG00000233652.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233652.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000416803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP1;transcript_id=HG002_chrY_T0001897;gene_id=HG002_chrY_G0000659;Parent=HG002_chrY_T0001897;transcript_name=HG002_chrY_T0001897;gene_name=CICP1;ID=exon:HG002_chrY_T0001897:0;Name=CICP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24583441	24583850	.	+	.	source_transcript=ENST00000416803.1;source_transcript_name=CICP1-201;source_gene=ENSG00000233652.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233652.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000416803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP1;transcript_id=HG002_chrY_T0001897;gene_id=HG002_chrY_G0000659;Parent=HG002_chrY_T0001897;transcript_name=HG002_chrY_T0001897;gene_name=CICP1;ID=intron:HG002_chrY_T0001897:0;Name=CICP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24583851	24583977	.	+	.	source_transcript=ENST00000416803.1;source_transcript_name=CICP1-201;source_gene=ENSG00000233652.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233652.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000416803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP1;transcript_id=HG002_chrY_T0001897;gene_id=HG002_chrY_G0000659;Parent=HG002_chrY_T0001897;transcript_name=HG002_chrY_T0001897;gene_name=CICP1;ID=exon:HG002_chrY_T0001897:1;Name=CICP1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24585288	24586069	.	-	.	source_gene_common_name=LINC00265-2P;source_gene=ENSG00000224827.1;gene_id=HG002_chrY_G0000660;gene_biotype=processed_pseudogene;gene_name=LINC00265-2P;gene_sources=transMap_pairwise;ID=HG002_chrY_G0000660;Name=LINC00265-2P
HG002_chrY	CAT	transcript	24585288	24586069	1000	-	.	source_transcript=ENST00000413372.1;source_transcript_name=LINC00265-2P-201;source_gene=ENSG00000224827.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224827.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413372.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000413372.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00265-2P;transcript_id=HG002_chrY_T0001898;gene_id=HG002_chrY_G0000660;Parent=HG002_chrY_G0000660;transcript_name=HG002_chrY_T0001898;gene_name=LINC00265-2P;ID=HG002_chrY_T0001898;Name=LINC00265-2P
HG002_chrY	CAT	exon	24585288	24586069	.	-	.	source_transcript=ENST00000413372.1;source_transcript_name=LINC00265-2P-201;source_gene=ENSG00000224827.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224827.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413372.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000413372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00265-2P;transcript_id=HG002_chrY_T0001898;gene_id=HG002_chrY_G0000660;Parent=HG002_chrY_T0001898;transcript_name=HG002_chrY_T0001898;gene_name=LINC00265-2P;ID=exon:HG002_chrY_T0001898:0;Name=LINC00265-2P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24585320	24586223	.	-	.	source_gene_common_name=LINC00265-3P;source_gene=ENSG00000233944.1;gene_id=HG002_chrY_G0000661;gene_biotype=processed_pseudogene;gene_name=LINC00265-3P;gene_sources=liftoff;ID=HG002_chrY_G0000661;Name=LINC00265-3P
HG002_chrY	CAT	transcript	24585320	24586223	1000	-	.	source_transcript=ENST00000447588.1;source_transcript_name=LINC00265-3P-201;source_gene=ENSG00000233944.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233944.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000447588.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447588.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00265-3P;transcript_id=HG002_chrY_T0001899;gene_id=HG002_chrY_G0000661;Parent=HG002_chrY_G0000661;transcript_name=HG002_chrY_T0001899;gene_name=LINC00265-3P;ID=HG002_chrY_T0001899;Name=LINC00265-3P
HG002_chrY	CAT	exon	24585320	24586223	.	-	.	source_transcript=ENST00000447588.1;source_transcript_name=LINC00265-3P-201;source_gene=ENSG00000233944.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233944.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000447588.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447588.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00265-3P;transcript_id=HG002_chrY_T0001899;gene_id=HG002_chrY_G0000661;Parent=HG002_chrY_T0001899;transcript_name=HG002_chrY_T0001899;gene_name=LINC00265-3P;ID=exon:HG002_chrY_T0001899:0;Name=LINC00265-3P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24623326	24629486	.	+	.	source_gene_common_name=UBE2Q2P5Y;source_gene=ENSG00000223636.1;alternative_source_transcripts=ENST00000433767.1;gene_id=HG002_chrY_G0000662;gene_biotype=unprocessed_pseudogene;gene_name=UBE2Q2P5Y;gene_sources=liftoff;ID=HG002_chrY_G0000662;Name=UBE2Q2P5Y
HG002_chrY	CAT	transcript	24623326	24629486	1000	+	.	source_transcript=ENST00000413867.1;source_transcript_name=UBE2Q2P5Y-201;source_gene=ENSG00000223636.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223636.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413867.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413867.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P5Y;alternative_source_transcripts=ENST00000433767.1;transcript_id=HG002_chrY_T0001900;gene_id=HG002_chrY_G0000662;Parent=HG002_chrY_G0000662;transcript_name=HG002_chrY_T0001900;gene_name=UBE2Q2P5Y;ID=HG002_chrY_T0001900;Name=UBE2Q2P5Y
HG002_chrY	CAT	exon	24623326	24623427	.	+	.	source_transcript=ENST00000413867.1;source_transcript_name=UBE2Q2P5Y-201;source_gene=ENSG00000223636.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223636.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413867.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413867.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P5Y;alternative_source_transcripts=ENST00000433767.1;transcript_id=HG002_chrY_T0001900;gene_id=HG002_chrY_G0000662;Parent=HG002_chrY_T0001900;transcript_name=HG002_chrY_T0001900;gene_name=UBE2Q2P5Y;ID=exon:HG002_chrY_T0001900:0;Name=UBE2Q2P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24623428	24629381	.	+	.	source_transcript=ENST00000413867.1;source_transcript_name=UBE2Q2P5Y-201;source_gene=ENSG00000223636.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223636.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413867.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413867.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P5Y;alternative_source_transcripts=ENST00000433767.1;transcript_id=HG002_chrY_T0001900;gene_id=HG002_chrY_G0000662;Parent=HG002_chrY_T0001900;transcript_name=HG002_chrY_T0001900;gene_name=UBE2Q2P5Y;ID=intron:HG002_chrY_T0001900:0;Name=UBE2Q2P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24629382	24629486	.	+	.	source_transcript=ENST00000413867.1;source_transcript_name=UBE2Q2P5Y-201;source_gene=ENSG00000223636.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223636.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413867.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413867.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P5Y;alternative_source_transcripts=ENST00000433767.1;transcript_id=HG002_chrY_T0001900;gene_id=HG002_chrY_G0000662;Parent=HG002_chrY_T0001900;transcript_name=HG002_chrY_T0001900;gene_name=UBE2Q2P5Y;ID=exon:HG002_chrY_T0001900:1;Name=UBE2Q2P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24646731	24652743	.	+	.	source_gene_common_name=GOLGA2P3Y;source_gene=ENSG00000172297.7;gene_id=HG002_chrY_G0000663;gene_biotype=unprocessed_pseudogene;gene_name=GOLGA2P3Y;gene_sources=liftoff;ID=HG002_chrY_G0000663;Name=GOLGA2P3Y
HG002_chrY	CAT	transcript	24646731	24652743	1000	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG002_chrY_T0001901;gene_id=HG002_chrY_G0000663;Parent=HG002_chrY_G0000663;transcript_name=HG002_chrY_T0001901;gene_name=GOLGA2P3Y;ID=HG002_chrY_T0001901;Name=GOLGA2P3Y
HG002_chrY	CAT	exon	24646731	24646850	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG002_chrY_T0001901;gene_id=HG002_chrY_G0000663;Parent=HG002_chrY_T0001901;transcript_name=HG002_chrY_T0001901;gene_name=GOLGA2P3Y;ID=exon:HG002_chrY_T0001901:0;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24646851	24647463	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG002_chrY_T0001901;gene_id=HG002_chrY_G0000663;Parent=HG002_chrY_T0001901;transcript_name=HG002_chrY_T0001901;gene_name=GOLGA2P3Y;ID=intron:HG002_chrY_T0001901:0;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24647464	24647523	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG002_chrY_T0001901;gene_id=HG002_chrY_G0000663;Parent=HG002_chrY_T0001901;transcript_name=HG002_chrY_T0001901;gene_name=GOLGA2P3Y;ID=exon:HG002_chrY_T0001901:1;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24647524	24647709	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG002_chrY_T0001901;gene_id=HG002_chrY_G0000663;Parent=HG002_chrY_T0001901;transcript_name=HG002_chrY_T0001901;gene_name=GOLGA2P3Y;ID=intron:HG002_chrY_T0001901:1;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24647710	24647788	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG002_chrY_T0001901;gene_id=HG002_chrY_G0000663;Parent=HG002_chrY_T0001901;transcript_name=HG002_chrY_T0001901;gene_name=GOLGA2P3Y;ID=exon:HG002_chrY_T0001901:2;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24647789	24648908	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG002_chrY_T0001901;gene_id=HG002_chrY_G0000663;Parent=HG002_chrY_T0001901;transcript_name=HG002_chrY_T0001901;gene_name=GOLGA2P3Y;ID=intron:HG002_chrY_T0001901:2;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24648909	24649258	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG002_chrY_T0001901;gene_id=HG002_chrY_G0000663;Parent=HG002_chrY_T0001901;transcript_name=HG002_chrY_T0001901;gene_name=GOLGA2P3Y;ID=exon:HG002_chrY_T0001901:3;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24649259	24649556	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG002_chrY_T0001901;gene_id=HG002_chrY_G0000663;Parent=HG002_chrY_T0001901;transcript_name=HG002_chrY_T0001901;gene_name=GOLGA2P3Y;ID=intron:HG002_chrY_T0001901:3;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24649557	24649614	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG002_chrY_T0001901;gene_id=HG002_chrY_G0000663;Parent=HG002_chrY_T0001901;transcript_name=HG002_chrY_T0001901;gene_name=GOLGA2P3Y;ID=exon:HG002_chrY_T0001901:4;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24649615	24650644	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG002_chrY_T0001901;gene_id=HG002_chrY_G0000663;Parent=HG002_chrY_T0001901;transcript_name=HG002_chrY_T0001901;gene_name=GOLGA2P3Y;ID=intron:HG002_chrY_T0001901:4;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24650645	24650714	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG002_chrY_T0001901;gene_id=HG002_chrY_G0000663;Parent=HG002_chrY_T0001901;transcript_name=HG002_chrY_T0001901;gene_name=GOLGA2P3Y;ID=exon:HG002_chrY_T0001901:5;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24650715	24650733	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG002_chrY_T0001901;gene_id=HG002_chrY_G0000663;Parent=HG002_chrY_T0001901;transcript_name=HG002_chrY_T0001901;gene_name=GOLGA2P3Y;ID=intron:HG002_chrY_T0001901:5;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24650734	24650894	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG002_chrY_T0001901;gene_id=HG002_chrY_G0000663;Parent=HG002_chrY_T0001901;transcript_name=HG002_chrY_T0001901;gene_name=GOLGA2P3Y;ID=exon:HG002_chrY_T0001901:6;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24650895	24650970	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG002_chrY_T0001901;gene_id=HG002_chrY_G0000663;Parent=HG002_chrY_T0001901;transcript_name=HG002_chrY_T0001901;gene_name=GOLGA2P3Y;ID=intron:HG002_chrY_T0001901:6;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24650971	24651045	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG002_chrY_T0001901;gene_id=HG002_chrY_G0000663;Parent=HG002_chrY_T0001901;transcript_name=HG002_chrY_T0001901;gene_name=GOLGA2P3Y;ID=exon:HG002_chrY_T0001901:7;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24651046	24651465	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG002_chrY_T0001901;gene_id=HG002_chrY_G0000663;Parent=HG002_chrY_T0001901;transcript_name=HG002_chrY_T0001901;gene_name=GOLGA2P3Y;ID=intron:HG002_chrY_T0001901:7;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24651466	24651554	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG002_chrY_T0001901;gene_id=HG002_chrY_G0000663;Parent=HG002_chrY_T0001901;transcript_name=HG002_chrY_T0001901;gene_name=GOLGA2P3Y;ID=exon:HG002_chrY_T0001901:8;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24651555	24651809	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG002_chrY_T0001901;gene_id=HG002_chrY_G0000663;Parent=HG002_chrY_T0001901;transcript_name=HG002_chrY_T0001901;gene_name=GOLGA2P3Y;ID=intron:HG002_chrY_T0001901:8;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24651810	24651998	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG002_chrY_T0001901;gene_id=HG002_chrY_G0000663;Parent=HG002_chrY_T0001901;transcript_name=HG002_chrY_T0001901;gene_name=GOLGA2P3Y;ID=exon:HG002_chrY_T0001901:9;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24651999	24652087	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG002_chrY_T0001901;gene_id=HG002_chrY_G0000663;Parent=HG002_chrY_T0001901;transcript_name=HG002_chrY_T0001901;gene_name=GOLGA2P3Y;ID=intron:HG002_chrY_T0001901:9;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24652088	24652180	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG002_chrY_T0001901;gene_id=HG002_chrY_G0000663;Parent=HG002_chrY_T0001901;transcript_name=HG002_chrY_T0001901;gene_name=GOLGA2P3Y;ID=exon:HG002_chrY_T0001901:10;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24652181	24652262	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG002_chrY_T0001901;gene_id=HG002_chrY_G0000663;Parent=HG002_chrY_T0001901;transcript_name=HG002_chrY_T0001901;gene_name=GOLGA2P3Y;ID=intron:HG002_chrY_T0001901:10;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24652263	24652353	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG002_chrY_T0001901;gene_id=HG002_chrY_G0000663;Parent=HG002_chrY_T0001901;transcript_name=HG002_chrY_T0001901;gene_name=GOLGA2P3Y;ID=exon:HG002_chrY_T0001901:11;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24652354	24652435	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG002_chrY_T0001901;gene_id=HG002_chrY_G0000663;Parent=HG002_chrY_T0001901;transcript_name=HG002_chrY_T0001901;gene_name=GOLGA2P3Y;ID=intron:HG002_chrY_T0001901:11;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24652436	24652591	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG002_chrY_T0001901;gene_id=HG002_chrY_G0000663;Parent=HG002_chrY_T0001901;transcript_name=HG002_chrY_T0001901;gene_name=GOLGA2P3Y;ID=exon:HG002_chrY_T0001901:12;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24652592	24652681	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG002_chrY_T0001901;gene_id=HG002_chrY_G0000663;Parent=HG002_chrY_T0001901;transcript_name=HG002_chrY_T0001901;gene_name=GOLGA2P3Y;ID=intron:HG002_chrY_T0001901:12;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24652682	24652743	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG002_chrY_T0001901;gene_id=HG002_chrY_G0000663;Parent=HG002_chrY_T0001901;transcript_name=HG002_chrY_T0001901;gene_name=GOLGA2P3Y;ID=exon:HG002_chrY_T0001901:13;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24651097	24651355	.	+	.	source_gene_common_name=RN7SL725P;source_gene=ENSG00000278242.1;alternative_source_transcripts=ENST00000485099.3;gene_id=HG002_chrY_G0000664;gene_biotype=misc_RNA;gene_name=RN7SL725P;gene_sources=liftoff;ID=HG002_chrY_G0000664;Name=RN7SL725P
HG002_chrY	CAT	transcript	24651097	24651355	1000	+	.	source_transcript=ENST00000606439.2;source_transcript_name=RN7SL725P-201;source_gene=ENSG00000278242.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000278242.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000606439.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000606439.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SL725P;alternative_source_transcripts=ENST00000485099.3;transcript_id=HG002_chrY_T0001902;gene_id=HG002_chrY_G0000664;Parent=HG002_chrY_G0000664;transcript_name=HG002_chrY_T0001902;gene_name=RN7SL725P;ID=HG002_chrY_T0001902;Name=RN7SL725P
HG002_chrY	CAT	exon	24651097	24651355	.	+	.	source_transcript=ENST00000606439.2;source_transcript_name=RN7SL725P-201;source_gene=ENSG00000278242.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000278242.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000606439.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000606439.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SL725P;alternative_source_transcripts=ENST00000485099.3;transcript_id=HG002_chrY_T0001902;gene_id=HG002_chrY_G0000664;Parent=HG002_chrY_T0001902;transcript_name=HG002_chrY_T0001902;gene_name=RN7SL725P;ID=exon:HG002_chrY_T0001902:0;Name=RN7SL725P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24656177	24665789	.	+	.	source_gene_common_name=ENSG00000284071;source_gene=ENSG00000284071.1;gene_id=HG002_chrY_G0000665;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000284071;gene_sources=liftoff;ID=HG002_chrY_G0000665;Name=ENSG00000284071
HG002_chrY	CAT	transcript	24656177	24665789	1000	+	.	source_transcript=ENST00000624333.2;source_transcript_name=ENST00000624333;source_gene=ENSG00000284071.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284071.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000624333.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624333.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284071;transcript_id=HG002_chrY_T0001903;gene_id=HG002_chrY_G0000665;Parent=HG002_chrY_G0000665;transcript_name=HG002_chrY_T0001903;gene_name=ENSG00000284071;ID=HG002_chrY_T0001903;Name=ENSG00000284071
HG002_chrY	CAT	exon	24656177	24656261	.	+	.	source_transcript=ENST00000624333.2;source_transcript_name=ENST00000624333;source_gene=ENSG00000284071.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284071.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000624333.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624333.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284071;transcript_id=HG002_chrY_T0001903;gene_id=HG002_chrY_G0000665;Parent=HG002_chrY_T0001903;transcript_name=HG002_chrY_T0001903;gene_name=ENSG00000284071;ID=exon:HG002_chrY_T0001903:0;Name=ENSG00000284071;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24656262	24657682	.	+	.	source_transcript=ENST00000624333.2;source_transcript_name=ENST00000624333;source_gene=ENSG00000284071.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284071.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000624333.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624333.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284071;transcript_id=HG002_chrY_T0001903;gene_id=HG002_chrY_G0000665;Parent=HG002_chrY_T0001903;transcript_name=HG002_chrY_T0001903;gene_name=ENSG00000284071;ID=intron:HG002_chrY_T0001903:0;Name=ENSG00000284071;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24657683	24657832	.	+	.	source_transcript=ENST00000624333.2;source_transcript_name=ENST00000624333;source_gene=ENSG00000284071.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284071.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000624333.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624333.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284071;transcript_id=HG002_chrY_T0001903;gene_id=HG002_chrY_G0000665;Parent=HG002_chrY_T0001903;transcript_name=HG002_chrY_T0001903;gene_name=ENSG00000284071;ID=exon:HG002_chrY_T0001903:1;Name=ENSG00000284071;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24657833	24665627	.	+	.	source_transcript=ENST00000624333.2;source_transcript_name=ENST00000624333;source_gene=ENSG00000284071.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284071.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000624333.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624333.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284071;transcript_id=HG002_chrY_T0001903;gene_id=HG002_chrY_G0000665;Parent=HG002_chrY_T0001903;transcript_name=HG002_chrY_T0001903;gene_name=ENSG00000284071;ID=intron:HG002_chrY_T0001903:1;Name=ENSG00000284071;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24665628	24665789	.	+	.	source_transcript=ENST00000624333.2;source_transcript_name=ENST00000624333;source_gene=ENSG00000284071.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284071.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000624333.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624333.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284071;transcript_id=HG002_chrY_T0001903;gene_id=HG002_chrY_G0000665;Parent=HG002_chrY_T0001903;transcript_name=HG002_chrY_T0001903;gene_name=ENSG00000284071;ID=exon:HG002_chrY_T0001903:2;Name=ENSG00000284071;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24656269	24672813	.	+	.	source_gene_common_name=ENSG00000296017;source_gene=ENSG00000296017.1;gene_id=HG002_chrY_G0000666;gene_biotype=lncRNA;gene_name=ENSG00000296017;gene_sources=liftoff;ID=HG002_chrY_G0000666;Name=ENSG00000296017
HG002_chrY	CAT	transcript	24656269	24665848	1000	+	.	source_transcript=ENST00000735436.1;source_transcript_name=ENST00000735436;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735436.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG002_chrY_T0001904;gene_id=HG002_chrY_G0000666;Parent=HG002_chrY_G0000666;transcript_name=HG002_chrY_T0001904;gene_name=ENSG00000296017;ID=HG002_chrY_T0001904;Name=ENSG00000296017
HG002_chrY	CAT	exon	24656269	24656636	.	+	.	source_transcript=ENST00000735436.1;source_transcript_name=ENST00000735436;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG002_chrY_T0001904;gene_id=HG002_chrY_G0000666;Parent=HG002_chrY_T0001904;transcript_name=HG002_chrY_T0001904;gene_name=ENSG00000296017;ID=exon:HG002_chrY_T0001904:0;Name=ENSG00000296017;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24656637	24657682	.	+	.	source_transcript=ENST00000735436.1;source_transcript_name=ENST00000735436;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG002_chrY_T0001904;gene_id=HG002_chrY_G0000666;Parent=HG002_chrY_T0001904;transcript_name=HG002_chrY_T0001904;gene_name=ENSG00000296017;ID=intron:HG002_chrY_T0001904:0;Name=ENSG00000296017;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24657683	24657832	.	+	.	source_transcript=ENST00000735436.1;source_transcript_name=ENST00000735436;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG002_chrY_T0001904;gene_id=HG002_chrY_G0000666;Parent=HG002_chrY_T0001904;transcript_name=HG002_chrY_T0001904;gene_name=ENSG00000296017;ID=exon:HG002_chrY_T0001904:1;Name=ENSG00000296017;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24657833	24665627	.	+	.	source_transcript=ENST00000735436.1;source_transcript_name=ENST00000735436;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG002_chrY_T0001904;gene_id=HG002_chrY_G0000666;Parent=HG002_chrY_T0001904;transcript_name=HG002_chrY_T0001904;gene_name=ENSG00000296017;ID=intron:HG002_chrY_T0001904:1;Name=ENSG00000296017;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24665628	24665848	.	+	.	source_transcript=ENST00000735436.1;source_transcript_name=ENST00000735436;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG002_chrY_T0001904;gene_id=HG002_chrY_G0000666;Parent=HG002_chrY_T0001904;transcript_name=HG002_chrY_T0001904;gene_name=ENSG00000296017;ID=exon:HG002_chrY_T0001904:2;Name=ENSG00000296017;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24656270	24672813	1000	+	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG002_chrY_T0001905;gene_id=HG002_chrY_G0000666;Parent=HG002_chrY_G0000666;transcript_name=HG002_chrY_T0001905;gene_name=ENSG00000296017;ID=HG002_chrY_T0001905;Name=ENSG00000296017
HG002_chrY	CAT	exon	24656270	24656636	.	+	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG002_chrY_T0001905;gene_id=HG002_chrY_G0000666;Parent=HG002_chrY_T0001905;transcript_name=HG002_chrY_T0001905;gene_name=ENSG00000296017;ID=exon:HG002_chrY_T0001905:0;Name=ENSG00000296017;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24656637	24657653	.	+	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG002_chrY_T0001905;gene_id=HG002_chrY_G0000666;Parent=HG002_chrY_T0001905;transcript_name=HG002_chrY_T0001905;gene_name=ENSG00000296017;ID=intron:HG002_chrY_T0001905:0;Name=ENSG00000296017;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24657654	24657832	.	+	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG002_chrY_T0001905;gene_id=HG002_chrY_G0000666;Parent=HG002_chrY_T0001905;transcript_name=HG002_chrY_T0001905;gene_name=ENSG00000296017;ID=exon:HG002_chrY_T0001905:1;Name=ENSG00000296017;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24657833	24665627	.	+	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG002_chrY_T0001905;gene_id=HG002_chrY_G0000666;Parent=HG002_chrY_T0001905;transcript_name=HG002_chrY_T0001905;gene_name=ENSG00000296017;ID=intron:HG002_chrY_T0001905:1;Name=ENSG00000296017;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24665628	24665732	.	+	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG002_chrY_T0001905;gene_id=HG002_chrY_G0000666;Parent=HG002_chrY_T0001905;transcript_name=HG002_chrY_T0001905;gene_name=ENSG00000296017;ID=exon:HG002_chrY_T0001905:2;Name=ENSG00000296017;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24665733	24670436	.	+	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG002_chrY_T0001905;gene_id=HG002_chrY_G0000666;Parent=HG002_chrY_T0001905;transcript_name=HG002_chrY_T0001905;gene_name=ENSG00000296017;ID=intron:HG002_chrY_T0001905:2;Name=ENSG00000296017;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24670437	24670600	.	+	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG002_chrY_T0001905;gene_id=HG002_chrY_G0000666;Parent=HG002_chrY_T0001905;transcript_name=HG002_chrY_T0001905;gene_name=ENSG00000296017;ID=exon:HG002_chrY_T0001905:3;Name=ENSG00000296017;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24670601	24672238	.	+	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG002_chrY_T0001905;gene_id=HG002_chrY_G0000666;Parent=HG002_chrY_T0001905;transcript_name=HG002_chrY_T0001905;gene_name=ENSG00000296017;ID=intron:HG002_chrY_T0001905:3;Name=ENSG00000296017;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24672239	24672813	.	+	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG002_chrY_T0001905;gene_id=HG002_chrY_G0000666;Parent=HG002_chrY_T0001905;transcript_name=HG002_chrY_T0001905;gene_name=ENSG00000296017;ID=exon:HG002_chrY_T0001905:4;Name=ENSG00000296017;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24656424	24665848	1000	+	.	source_transcript=ENST00000735437.1;source_transcript_name=ENST00000735437;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735437.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG002_chrY_T0001906;gene_id=HG002_chrY_G0000666;Parent=HG002_chrY_G0000666;transcript_name=HG002_chrY_T0001906;gene_name=ENSG00000296017;ID=HG002_chrY_T0001906;Name=ENSG00000296017
HG002_chrY	CAT	exon	24656424	24656636	.	+	.	source_transcript=ENST00000735437.1;source_transcript_name=ENST00000735437;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG002_chrY_T0001906;gene_id=HG002_chrY_G0000666;Parent=HG002_chrY_T0001906;transcript_name=HG002_chrY_T0001906;gene_name=ENSG00000296017;ID=exon:HG002_chrY_T0001906:0;Name=ENSG00000296017;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24656637	24657653	.	+	.	source_transcript=ENST00000735437.1;source_transcript_name=ENST00000735437;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG002_chrY_T0001906;gene_id=HG002_chrY_G0000666;Parent=HG002_chrY_T0001906;transcript_name=HG002_chrY_T0001906;gene_name=ENSG00000296017;ID=intron:HG002_chrY_T0001906:0;Name=ENSG00000296017;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24657654	24657832	.	+	.	source_transcript=ENST00000735437.1;source_transcript_name=ENST00000735437;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG002_chrY_T0001906;gene_id=HG002_chrY_G0000666;Parent=HG002_chrY_T0001906;transcript_name=HG002_chrY_T0001906;gene_name=ENSG00000296017;ID=exon:HG002_chrY_T0001906:1;Name=ENSG00000296017;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24657833	24665627	.	+	.	source_transcript=ENST00000735437.1;source_transcript_name=ENST00000735437;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG002_chrY_T0001906;gene_id=HG002_chrY_G0000666;Parent=HG002_chrY_T0001906;transcript_name=HG002_chrY_T0001906;gene_name=ENSG00000296017;ID=intron:HG002_chrY_T0001906:1;Name=ENSG00000296017;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24665628	24665848	.	+	.	source_transcript=ENST00000735437.1;source_transcript_name=ENST00000735437;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG002_chrY_T0001906;gene_id=HG002_chrY_G0000666;Parent=HG002_chrY_T0001906;transcript_name=HG002_chrY_T0001906;gene_name=ENSG00000296017;ID=exon:HG002_chrY_T0001906:2;Name=ENSG00000296017;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24675076	24678873	.	+	.	source_gene_common_name=CSPG4P1Y;source_gene=ENSG00000240450.1;gene_id=HG002_chrY_G0000667;gene_biotype=lncRNA;gene_name=CSPG4P1Y;gene_sources=liftoff;ID=HG002_chrY_G0000667;Name=CSPG4P1Y
HG002_chrY	CAT	transcript	24675076	24678873	1000	+	.	source_transcript=ENST00000306641.1;source_transcript_name=CSPG4P1Y-201;source_gene=ENSG00000240450.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000240450.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306641.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306641.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG002_chrY_T0001907;gene_id=HG002_chrY_G0000667;Parent=HG002_chrY_G0000667;transcript_name=HG002_chrY_T0001907;gene_name=CSPG4P1Y;ID=HG002_chrY_T0001907;Name=CSPG4P1Y
HG002_chrY	CAT	exon	24675076	24675798	.	+	.	source_transcript=ENST00000306641.1;source_transcript_name=CSPG4P1Y-201;source_gene=ENSG00000240450.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000240450.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306641.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306641.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG002_chrY_T0001907;gene_id=HG002_chrY_G0000667;Parent=HG002_chrY_T0001907;transcript_name=HG002_chrY_T0001907;gene_name=CSPG4P1Y;ID=exon:HG002_chrY_T0001907:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24675799	24678801	.	+	.	source_transcript=ENST00000306641.1;source_transcript_name=CSPG4P1Y-201;source_gene=ENSG00000240450.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000240450.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306641.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306641.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG002_chrY_T0001907;gene_id=HG002_chrY_G0000667;Parent=HG002_chrY_T0001907;transcript_name=HG002_chrY_T0001907;gene_name=CSPG4P1Y;ID=intron:HG002_chrY_T0001907:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24678802	24678873	.	+	.	source_transcript=ENST00000306641.1;source_transcript_name=CSPG4P1Y-201;source_gene=ENSG00000240450.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000240450.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306641.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306641.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG002_chrY_T0001907;gene_id=HG002_chrY_G0000667;Parent=HG002_chrY_T0001907;transcript_name=HG002_chrY_T0001907;gene_name=CSPG4P1Y;ID=exon:HG002_chrY_T0001907:1;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24678808	24679490	.	+	.	source_gene_common_name=DNM1P48;source_gene=ENSG00000239304.1;gene_id=HG002_chrY_G0000668;gene_biotype=transcribed_processed_pseudogene;gene_name=DNM1P48;gene_sources=liftoff;ID=HG002_chrY_G0000668;Name=DNM1P48
HG002_chrY	CAT	transcript	24678808	24679490	1000	+	.	source_transcript=ENST00000419538.1;source_transcript_name=DNM1P48-201;source_gene=ENSG00000239304.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239304.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000419538.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419538.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P48;transcript_id=HG002_chrY_T0001908;gene_id=HG002_chrY_G0000668;Parent=HG002_chrY_G0000668;transcript_name=HG002_chrY_T0001908;gene_name=DNM1P48;ID=HG002_chrY_T0001908;Name=DNM1P48
HG002_chrY	CAT	exon	24678808	24679033	.	+	.	source_transcript=ENST00000419538.1;source_transcript_name=DNM1P48-201;source_gene=ENSG00000239304.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239304.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000419538.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P48;transcript_id=HG002_chrY_T0001908;gene_id=HG002_chrY_G0000668;Parent=HG002_chrY_T0001908;transcript_name=HG002_chrY_T0001908;gene_name=DNM1P48;ID=exon:HG002_chrY_T0001908:0;Name=DNM1P48;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24679034	24679277	.	+	.	source_transcript=ENST00000419538.1;source_transcript_name=DNM1P48-201;source_gene=ENSG00000239304.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239304.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000419538.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P48;transcript_id=HG002_chrY_T0001908;gene_id=HG002_chrY_G0000668;Parent=HG002_chrY_T0001908;transcript_name=HG002_chrY_T0001908;gene_name=DNM1P48;ID=intron:HG002_chrY_T0001908:0;Name=DNM1P48;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24679278	24679490	.	+	.	source_transcript=ENST00000419538.1;source_transcript_name=DNM1P48-201;source_gene=ENSG00000239304.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239304.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000419538.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P48;transcript_id=HG002_chrY_T0001908;gene_id=HG002_chrY_G0000668;Parent=HG002_chrY_T0001908;transcript_name=HG002_chrY_T0001908;gene_name=DNM1P48;ID=exon:HG002_chrY_T0001908:1;Name=DNM1P48;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24679452	24679830	.	-	.	source_gene_common_name=ENSG00000233619;source_gene=ENSG00000233619.1;gene_id=HG002_chrY_G0000669;gene_biotype=processed_pseudogene;gene_name=ENSG00000233619;gene_sources=liftoff;ID=HG002_chrY_G0000669;Name=ENSG00000233619
HG002_chrY	CAT	transcript	24679452	24679830	1000	-	.	source_transcript=ENST00000437571.1;source_transcript_name=ENST00000437571;source_gene=ENSG00000233619.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233619.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000437571.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437571.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000233619;transcript_id=HG002_chrY_T0001909;gene_id=HG002_chrY_G0000669;Parent=HG002_chrY_G0000669;transcript_name=HG002_chrY_T0001909;gene_name=ENSG00000233619;ID=HG002_chrY_T0001909;Name=ENSG00000233619
HG002_chrY	CAT	exon	24679452	24679830	.	-	.	source_transcript=ENST00000437571.1;source_transcript_name=ENST00000437571;source_gene=ENSG00000233619.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233619.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000437571.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437571.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000233619;transcript_id=HG002_chrY_T0001909;gene_id=HG002_chrY_G0000669;Parent=HG002_chrY_T0001909;transcript_name=HG002_chrY_T0001909;gene_name=ENSG00000233619;ID=exon:HG002_chrY_T0001909:0;Name=ENSG00000233619;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24685102	24690685	.	-	.	source_gene_common_name=ENSG00000307363;source_gene=ENSG00000307363.1;gene_id=HG002_chrY_G0000670;gene_biotype=lncRNA;gene_name=ENSG00000307363;gene_sources=liftoff;ID=HG002_chrY_G0000670;Name=ENSG00000307363
HG002_chrY	CAT	transcript	24685102	24690512	1000	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001910;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_G0000670;transcript_name=HG002_chrY_T0001910;gene_name=ENSG00000307363;ID=HG002_chrY_T0001910;Name=ENSG00000307363
HG002_chrY	CAT	exon	24685102	24687955	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001910;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001910;transcript_name=HG002_chrY_T0001910;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001910:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24687956	24688164	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001910;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001910;transcript_name=HG002_chrY_T0001910;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001910:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24688165	24688279	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001910;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001910;transcript_name=HG002_chrY_T0001910;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001910:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24688280	24689319	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001910;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001910;transcript_name=HG002_chrY_T0001910;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001910:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24689320	24689380	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001910;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001910;transcript_name=HG002_chrY_T0001910;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001910:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24689381	24689647	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001910;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001910;transcript_name=HG002_chrY_T0001910;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001910:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24689648	24690512	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001910;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001910;transcript_name=HG002_chrY_T0001910;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001910:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24687389	24690255	1000	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001911;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_G0000670;transcript_name=HG002_chrY_T0001911;gene_name=ENSG00000307363;ID=HG002_chrY_T0001911;Name=ENSG00000307363
HG002_chrY	CAT	exon	24687389	24687955	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001911;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001911;transcript_name=HG002_chrY_T0001911;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001911:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24687956	24688164	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001911;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001911;transcript_name=HG002_chrY_T0001911;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001911:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24688165	24688279	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001911;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001911;transcript_name=HG002_chrY_T0001911;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001911:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24688280	24689302	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001911;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001911;transcript_name=HG002_chrY_T0001911;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001911:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24689303	24689380	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001911;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001911;transcript_name=HG002_chrY_T0001911;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001911:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24689381	24689647	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001911;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001911;transcript_name=HG002_chrY_T0001911;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001911:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24689648	24690255	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001911;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001911;transcript_name=HG002_chrY_T0001911;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001911:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24687790	24688514	1000	-	.	source_transcript=ENST00000825441.1;source_transcript_name=ENST00000825441;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825441.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001912;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_G0000670;transcript_name=HG002_chrY_T0001912;gene_name=ENSG00000307363;ID=HG002_chrY_T0001912;Name=ENSG00000307363
HG002_chrY	CAT	exon	24687790	24687955	.	-	.	source_transcript=ENST00000825441.1;source_transcript_name=ENST00000825441;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001912;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001912;transcript_name=HG002_chrY_T0001912;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001912:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24687956	24688164	.	-	.	source_transcript=ENST00000825441.1;source_transcript_name=ENST00000825441;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001912;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001912;transcript_name=HG002_chrY_T0001912;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001912:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24688165	24688514	.	-	.	source_transcript=ENST00000825441.1;source_transcript_name=ENST00000825441;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001912;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001912;transcript_name=HG002_chrY_T0001912;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001912:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24687791	24689882	1000	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001913;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_G0000670;transcript_name=HG002_chrY_T0001913;gene_name=ENSG00000307363;ID=HG002_chrY_T0001913;Name=ENSG00000307363
HG002_chrY	CAT	exon	24687791	24687955	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001913;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001913;transcript_name=HG002_chrY_T0001913;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001913:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24687956	24688164	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001913;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001913;transcript_name=HG002_chrY_T0001913;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001913:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24688165	24688279	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001913;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001913;transcript_name=HG002_chrY_T0001913;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001913:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24688280	24689141	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001913;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001913;transcript_name=HG002_chrY_T0001913;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001913:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24689142	24689380	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001913;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001913;transcript_name=HG002_chrY_T0001913;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001913:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24689381	24689647	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001913;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001913;transcript_name=HG002_chrY_T0001913;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001913:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24689648	24689882	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001913;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001913;transcript_name=HG002_chrY_T0001913;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001913:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24687791	24690091	1000	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001914;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_G0000670;transcript_name=HG002_chrY_T0001914;gene_name=ENSG00000307363;ID=HG002_chrY_T0001914;Name=ENSG00000307363
HG002_chrY	CAT	exon	24687791	24687955	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001914;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001914;transcript_name=HG002_chrY_T0001914;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001914:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24687956	24688164	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001914;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001914;transcript_name=HG002_chrY_T0001914;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001914:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24688165	24688279	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001914;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001914;transcript_name=HG002_chrY_T0001914;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001914:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24688280	24689319	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001914;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001914;transcript_name=HG002_chrY_T0001914;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001914:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24689320	24689380	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001914;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001914;transcript_name=HG002_chrY_T0001914;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001914:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24689381	24689918	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001914;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001914;transcript_name=HG002_chrY_T0001914;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001914:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24689919	24690091	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001914;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001914;transcript_name=HG002_chrY_T0001914;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001914:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24687791	24690685	1000	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001915;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_G0000670;transcript_name=HG002_chrY_T0001915;gene_name=ENSG00000307363;ID=HG002_chrY_T0001915;Name=ENSG00000307363
HG002_chrY	CAT	exon	24687791	24687955	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001915;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001915;transcript_name=HG002_chrY_T0001915;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001915:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24687956	24688164	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001915;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001915;transcript_name=HG002_chrY_T0001915;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001915:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24688165	24688279	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001915;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001915;transcript_name=HG002_chrY_T0001915;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001915:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24688280	24689141	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001915;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001915;transcript_name=HG002_chrY_T0001915;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001915:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24689142	24689380	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001915;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001915;transcript_name=HG002_chrY_T0001915;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001915:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24689381	24690604	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001915;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001915;transcript_name=HG002_chrY_T0001915;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001915:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24690605	24690685	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001915;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001915;transcript_name=HG002_chrY_T0001915;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001915:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24687791	24689665	1000	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001916;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_G0000670;transcript_name=HG002_chrY_T0001916;gene_name=ENSG00000307363;ID=HG002_chrY_T0001916;Name=ENSG00000307363
HG002_chrY	CAT	exon	24687791	24687955	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001916;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001916;transcript_name=HG002_chrY_T0001916;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001916:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24687956	24688164	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001916;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001916;transcript_name=HG002_chrY_T0001916;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001916:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24688165	24688279	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001916;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001916;transcript_name=HG002_chrY_T0001916;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001916:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24688280	24689302	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001916;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001916;transcript_name=HG002_chrY_T0001916;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001916:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24689303	24689380	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001916;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001916;transcript_name=HG002_chrY_T0001916;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001916:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24689381	24689491	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001916;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001916;transcript_name=HG002_chrY_T0001916;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001916:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24689492	24689665	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001916;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001916;transcript_name=HG002_chrY_T0001916;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001916:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24687791	24690083	1000	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001917;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_G0000670;transcript_name=HG002_chrY_T0001917;gene_name=ENSG00000307363;ID=HG002_chrY_T0001917;Name=ENSG00000307363
HG002_chrY	CAT	exon	24687791	24687955	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001917;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001917;transcript_name=HG002_chrY_T0001917;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001917:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24687956	24688164	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001917;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001917;transcript_name=HG002_chrY_T0001917;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001917:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24688165	24688279	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001917;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001917;transcript_name=HG002_chrY_T0001917;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001917:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24688280	24689141	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001917;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001917;transcript_name=HG002_chrY_T0001917;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001917:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24689142	24689380	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001917;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001917;transcript_name=HG002_chrY_T0001917;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001917:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24689381	24689918	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001917;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001917;transcript_name=HG002_chrY_T0001917;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001917:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24689919	24690083	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001917;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001917;transcript_name=HG002_chrY_T0001917;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001917:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24687791	24689759	1000	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001918;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_G0000670;transcript_name=HG002_chrY_T0001918;gene_name=ENSG00000307363;ID=HG002_chrY_T0001918;Name=ENSG00000307363
HG002_chrY	CAT	exon	24687791	24687955	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001918;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001918;transcript_name=HG002_chrY_T0001918;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001918:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24687956	24688164	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001918;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001918;transcript_name=HG002_chrY_T0001918;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001918:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24688165	24688279	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001918;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001918;transcript_name=HG002_chrY_T0001918;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001918:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24688280	24689319	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001918;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001918;transcript_name=HG002_chrY_T0001918;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001918:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24689320	24689380	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001918;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001918;transcript_name=HG002_chrY_T0001918;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001918:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24689381	24689491	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001918;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001918;transcript_name=HG002_chrY_T0001918;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001918:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24689492	24689759	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001918;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001918;transcript_name=HG002_chrY_T0001918;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001918:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24687791	24690001	1000	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001919;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_G0000670;transcript_name=HG002_chrY_T0001919;gene_name=ENSG00000307363;ID=HG002_chrY_T0001919;Name=ENSG00000307363
HG002_chrY	CAT	exon	24687791	24687955	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001919;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001919;transcript_name=HG002_chrY_T0001919;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001919:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24687956	24688164	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001919;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001919;transcript_name=HG002_chrY_T0001919;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001919:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24688165	24688279	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001919;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001919;transcript_name=HG002_chrY_T0001919;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001919:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24688280	24689302	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001919;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001919;transcript_name=HG002_chrY_T0001919;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001919:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24689303	24689380	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001919;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001919;transcript_name=HG002_chrY_T0001919;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001919:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24689381	24689818	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001919;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001919;transcript_name=HG002_chrY_T0001919;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001919:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24689819	24690001	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001919;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001919;transcript_name=HG002_chrY_T0001919;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001919:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24687791	24690035	1000	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001920;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_G0000670;transcript_name=HG002_chrY_T0001920;gene_name=ENSG00000307363;ID=HG002_chrY_T0001920;Name=ENSG00000307363
HG002_chrY	CAT	exon	24687791	24687955	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001920;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001920;transcript_name=HG002_chrY_T0001920;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001920:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24687956	24688164	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001920;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001920;transcript_name=HG002_chrY_T0001920;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001920:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24688165	24688279	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001920;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001920;transcript_name=HG002_chrY_T0001920;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001920:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24688280	24689302	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001920;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001920;transcript_name=HG002_chrY_T0001920;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001920:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24689303	24689380	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001920;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001920;transcript_name=HG002_chrY_T0001920;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001920:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24689381	24689918	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001920;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001920;transcript_name=HG002_chrY_T0001920;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001920:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24689919	24690035	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001920;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001920;transcript_name=HG002_chrY_T0001920;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001920:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24687791	24689980	1000	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001921;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_G0000670;transcript_name=HG002_chrY_T0001921;gene_name=ENSG00000307363;ID=HG002_chrY_T0001921;Name=ENSG00000307363
HG002_chrY	CAT	exon	24687791	24687955	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001921;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001921;transcript_name=HG002_chrY_T0001921;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001921:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24687956	24688164	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001921;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001921;transcript_name=HG002_chrY_T0001921;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001921:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24688165	24688279	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001921;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001921;transcript_name=HG002_chrY_T0001921;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001921:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24688280	24689141	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001921;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001921;transcript_name=HG002_chrY_T0001921;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001921:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24689142	24689380	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001921;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001921;transcript_name=HG002_chrY_T0001921;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001921:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24689381	24689818	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001921;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001921;transcript_name=HG002_chrY_T0001921;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001921:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24689819	24689980	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001921;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001921;transcript_name=HG002_chrY_T0001921;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001921:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24687791	24689665	1000	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001922;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_G0000670;transcript_name=HG002_chrY_T0001922;gene_name=ENSG00000307363;ID=HG002_chrY_T0001922;Name=ENSG00000307363
HG002_chrY	CAT	exon	24687791	24687955	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001922;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001922;transcript_name=HG002_chrY_T0001922;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001922:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24687956	24688164	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001922;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001922;transcript_name=HG002_chrY_T0001922;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001922:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24688165	24688279	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001922;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001922;transcript_name=HG002_chrY_T0001922;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001922:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24688280	24689141	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001922;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001922;transcript_name=HG002_chrY_T0001922;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001922:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24689142	24689380	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001922;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001922;transcript_name=HG002_chrY_T0001922;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001922:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24689381	24689491	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001922;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001922;transcript_name=HG002_chrY_T0001922;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001922:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24689492	24689665	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001922;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001922;transcript_name=HG002_chrY_T0001922;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001922:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24687791	24690001	1000	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001923;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_G0000670;transcript_name=HG002_chrY_T0001923;gene_name=ENSG00000307363;ID=HG002_chrY_T0001923;Name=ENSG00000307363
HG002_chrY	CAT	exon	24687791	24687955	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001923;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001923;transcript_name=HG002_chrY_T0001923;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001923:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24687956	24688164	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001923;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001923;transcript_name=HG002_chrY_T0001923;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001923:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24688165	24688279	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001923;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001923;transcript_name=HG002_chrY_T0001923;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001923:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24688280	24689319	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001923;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001923;transcript_name=HG002_chrY_T0001923;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001923:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24689320	24689380	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001923;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001923;transcript_name=HG002_chrY_T0001923;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001923:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24689381	24689818	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001923;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001923;transcript_name=HG002_chrY_T0001923;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001923:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24689819	24690001	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001923;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001923;transcript_name=HG002_chrY_T0001923;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001923:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24687791	24690671	1000	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001924;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_G0000670;transcript_name=HG002_chrY_T0001924;gene_name=ENSG00000307363;ID=HG002_chrY_T0001924;Name=ENSG00000307363
HG002_chrY	CAT	exon	24687791	24687955	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001924;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001924;transcript_name=HG002_chrY_T0001924;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001924:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24687956	24688164	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001924;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001924;transcript_name=HG002_chrY_T0001924;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001924:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24688165	24688279	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001924;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001924;transcript_name=HG002_chrY_T0001924;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001924:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24688280	24689319	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001924;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001924;transcript_name=HG002_chrY_T0001924;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001924:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24689320	24689380	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001924;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001924;transcript_name=HG002_chrY_T0001924;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001924:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24689381	24690604	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001924;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001924;transcript_name=HG002_chrY_T0001924;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001924:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24690605	24690671	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001924;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001924;transcript_name=HG002_chrY_T0001924;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001924:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24687792	24689921	1000	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001925;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_G0000670;transcript_name=HG002_chrY_T0001925;gene_name=ENSG00000307363;ID=HG002_chrY_T0001925;Name=ENSG00000307363
HG002_chrY	CAT	exon	24687792	24687955	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001925;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001925;transcript_name=HG002_chrY_T0001925;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001925:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24687956	24688164	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001925;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001925;transcript_name=HG002_chrY_T0001925;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001925:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24688165	24688279	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001925;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001925;transcript_name=HG002_chrY_T0001925;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001925:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24688280	24689141	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001925;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001925;transcript_name=HG002_chrY_T0001925;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001925:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24689142	24689380	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001925;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001925;transcript_name=HG002_chrY_T0001925;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001925:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24689381	24689732	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001925;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001925;transcript_name=HG002_chrY_T0001925;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0001925:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24689733	24689921	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0001925;gene_id=HG002_chrY_G0000670;Parent=HG002_chrY_T0001925;transcript_name=HG002_chrY_T0001925;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0001925:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24687823	24694130	.	-	.	source_gene_common_name=GOLGA6L16P;source_gene=ENSG00000197092.5_1;gene_id=HG002_chrY_G0000671;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=GOLGA6L16P;gene_sources=liftoff;ID=HG002_chrY_G0000671;Name=GOLGA6L16P
HG002_chrY	CAT	transcript	24687823	24694130	1000	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0001926;gene_id=HG002_chrY_G0000671;Parent=HG002_chrY_G0000671;transcript_name=HG002_chrY_T0001926;gene_name=GOLGA6L16P;ID=HG002_chrY_T0001926;Name=GOLGA6L16P
HG002_chrY	CAT	exon	24687823	24687954	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0001926;gene_id=HG002_chrY_G0000671;Parent=HG002_chrY_T0001926;transcript_name=HG002_chrY_T0001926;gene_name=GOLGA6L16P;ID=exon:HG002_chrY_T0001926:0;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24687955	24688163	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0001926;gene_id=HG002_chrY_G0000671;Parent=HG002_chrY_T0001926;transcript_name=HG002_chrY_T0001926;gene_name=GOLGA6L16P;ID=intron:HG002_chrY_T0001926:0;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24688164	24688287	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0001926;gene_id=HG002_chrY_G0000671;Parent=HG002_chrY_T0001926;transcript_name=HG002_chrY_T0001926;gene_name=GOLGA6L16P;ID=exon:HG002_chrY_T0001926:1;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24688288	24689309	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0001926;gene_id=HG002_chrY_G0000671;Parent=HG002_chrY_T0001926;transcript_name=HG002_chrY_T0001926;gene_name=GOLGA6L16P;ID=intron:HG002_chrY_T0001926:1;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24689310	24689380	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0001926;gene_id=HG002_chrY_G0000671;Parent=HG002_chrY_T0001926;transcript_name=HG002_chrY_T0001926;gene_name=GOLGA6L16P;ID=exon:HG002_chrY_T0001926:2;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24689381	24689647	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0001926;gene_id=HG002_chrY_G0000671;Parent=HG002_chrY_T0001926;transcript_name=HG002_chrY_T0001926;gene_name=GOLGA6L16P;ID=intron:HG002_chrY_T0001926:2;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24689648	24690217	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0001926;gene_id=HG002_chrY_G0000671;Parent=HG002_chrY_T0001926;transcript_name=HG002_chrY_T0001926;gene_name=GOLGA6L16P;ID=exon:HG002_chrY_T0001926:3;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24690218	24690622	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0001926;gene_id=HG002_chrY_G0000671;Parent=HG002_chrY_T0001926;transcript_name=HG002_chrY_T0001926;gene_name=GOLGA6L16P;ID=intron:HG002_chrY_T0001926:3;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24690623	24690679	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0001926;gene_id=HG002_chrY_G0000671;Parent=HG002_chrY_T0001926;transcript_name=HG002_chrY_T0001926;gene_name=GOLGA6L16P;ID=exon:HG002_chrY_T0001926:4;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24690680	24691335	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0001926;gene_id=HG002_chrY_G0000671;Parent=HG002_chrY_T0001926;transcript_name=HG002_chrY_T0001926;gene_name=GOLGA6L16P;ID=intron:HG002_chrY_T0001926:4;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24691336	24691416	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0001926;gene_id=HG002_chrY_G0000671;Parent=HG002_chrY_T0001926;transcript_name=HG002_chrY_T0001926;gene_name=GOLGA6L16P;ID=exon:HG002_chrY_T0001926:5;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24691417	24691601	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0001926;gene_id=HG002_chrY_G0000671;Parent=HG002_chrY_T0001926;transcript_name=HG002_chrY_T0001926;gene_name=GOLGA6L16P;ID=intron:HG002_chrY_T0001926:5;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24691602	24691661	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0001926;gene_id=HG002_chrY_G0000671;Parent=HG002_chrY_T0001926;transcript_name=HG002_chrY_T0001926;gene_name=GOLGA6L16P;ID=exon:HG002_chrY_T0001926:6;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24691662	24692283	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0001926;gene_id=HG002_chrY_G0000671;Parent=HG002_chrY_T0001926;transcript_name=HG002_chrY_T0001926;gene_name=GOLGA6L16P;ID=intron:HG002_chrY_T0001926:6;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24692284	24692403	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0001926;gene_id=HG002_chrY_G0000671;Parent=HG002_chrY_T0001926;transcript_name=HG002_chrY_T0001926;gene_name=GOLGA6L16P;ID=exon:HG002_chrY_T0001926:7;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24692404	24694046	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0001926;gene_id=HG002_chrY_G0000671;Parent=HG002_chrY_T0001926;transcript_name=HG002_chrY_T0001926;gene_name=GOLGA6L16P;ID=intron:HG002_chrY_T0001926:7;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24694047	24694130	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0001926;gene_id=HG002_chrY_G0000671;Parent=HG002_chrY_T0001926;transcript_name=HG002_chrY_T0001926;gene_name=GOLGA6L16P;ID=exon:HG002_chrY_T0001926:8;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24704473	24719958	.	-	.	source_gene_common_name=ENSG00000235583;source_gene=ENSG00000235583.2;gene_id=HG002_chrY_G0000672;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000235583;gene_sources=liftoff;ID=HG002_chrY_G0000672;Name=ENSG00000235583
HG002_chrY	CAT	transcript	24704473	24719958	1000	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG002_chrY_T0001927;gene_id=HG002_chrY_G0000672;Parent=HG002_chrY_G0000672;transcript_name=HG002_chrY_T0001927;gene_name=ENSG00000235583;ID=HG002_chrY_T0001927;Name=ENSG00000235583
HG002_chrY	CAT	exon	24704473	24704568	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG002_chrY_T0001927;gene_id=HG002_chrY_G0000672;Parent=HG002_chrY_T0001927;transcript_name=HG002_chrY_T0001927;gene_name=ENSG00000235583;ID=exon:HG002_chrY_T0001927:0;Name=ENSG00000235583;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24704569	24705296	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG002_chrY_T0001927;gene_id=HG002_chrY_G0000672;Parent=HG002_chrY_T0001927;transcript_name=HG002_chrY_T0001927;gene_name=ENSG00000235583;ID=intron:HG002_chrY_T0001927:0;Name=ENSG00000235583;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24705297	24705345	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG002_chrY_T0001927;gene_id=HG002_chrY_G0000672;Parent=HG002_chrY_T0001927;transcript_name=HG002_chrY_T0001927;gene_name=ENSG00000235583;ID=exon:HG002_chrY_T0001927:1;Name=ENSG00000235583;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24705346	24711850	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG002_chrY_T0001927;gene_id=HG002_chrY_G0000672;Parent=HG002_chrY_T0001927;transcript_name=HG002_chrY_T0001927;gene_name=ENSG00000235583;ID=intron:HG002_chrY_T0001927:1;Name=ENSG00000235583;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24711851	24711909	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG002_chrY_T0001927;gene_id=HG002_chrY_G0000672;Parent=HG002_chrY_T0001927;transcript_name=HG002_chrY_T0001927;gene_name=ENSG00000235583;ID=exon:HG002_chrY_T0001927:2;Name=ENSG00000235583;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24711910	24716192	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG002_chrY_T0001927;gene_id=HG002_chrY_G0000672;Parent=HG002_chrY_T0001927;transcript_name=HG002_chrY_T0001927;gene_name=ENSG00000235583;ID=intron:HG002_chrY_T0001927:2;Name=ENSG00000235583;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24716193	24716282	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG002_chrY_T0001927;gene_id=HG002_chrY_G0000672;Parent=HG002_chrY_T0001927;transcript_name=HG002_chrY_T0001927;gene_name=ENSG00000235583;ID=exon:HG002_chrY_T0001927:3;Name=ENSG00000235583;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24716283	24717375	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG002_chrY_T0001927;gene_id=HG002_chrY_G0000672;Parent=HG002_chrY_T0001927;transcript_name=HG002_chrY_T0001927;gene_name=ENSG00000235583;ID=intron:HG002_chrY_T0001927:3;Name=ENSG00000235583;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24717376	24717460	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG002_chrY_T0001927;gene_id=HG002_chrY_G0000672;Parent=HG002_chrY_T0001927;transcript_name=HG002_chrY_T0001927;gene_name=ENSG00000235583;ID=exon:HG002_chrY_T0001927:4;Name=ENSG00000235583;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24717461	24719820	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG002_chrY_T0001927;gene_id=HG002_chrY_G0000672;Parent=HG002_chrY_T0001927;transcript_name=HG002_chrY_T0001927;gene_name=ENSG00000235583;ID=intron:HG002_chrY_T0001927:4;Name=ENSG00000235583;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24719821	24719958	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG002_chrY_T0001927;gene_id=HG002_chrY_G0000672;Parent=HG002_chrY_T0001927;transcript_name=HG002_chrY_T0001927;gene_name=ENSG00000235583;ID=exon:HG002_chrY_T0001927:5;Name=ENSG00000235583;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24709535	24724930	.	-	.	source_gene_common_name=ENSG00000304207;source_gene=ENSG00000304207.1;gene_id=HG002_chrY_G0000673;gene_biotype=lncRNA;gene_name=ENSG00000304207;gene_sources=liftoff;ID=HG002_chrY_G0000673;Name=ENSG00000304207
HG002_chrY	CAT	transcript	24709535	24724929	1000	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001928;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_G0000673;transcript_name=HG002_chrY_T0001928;gene_name=ENSG00000304207;ID=HG002_chrY_T0001928;Name=ENSG00000304207
HG002_chrY	CAT	exon	24709535	24709970	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001928;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001928;transcript_name=HG002_chrY_T0001928;gene_name=ENSG00000304207;ID=exon:HG002_chrY_T0001928:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24709971	24716197	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001928;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001928;transcript_name=HG002_chrY_T0001928;gene_name=ENSG00000304207;ID=intron:HG002_chrY_T0001928:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24716198	24716282	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001928;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001928;transcript_name=HG002_chrY_T0001928;gene_name=ENSG00000304207;ID=exon:HG002_chrY_T0001928:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24716283	24717375	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001928;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001928;transcript_name=HG002_chrY_T0001928;gene_name=ENSG00000304207;ID=intron:HG002_chrY_T0001928:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24717376	24717460	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001928;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001928;transcript_name=HG002_chrY_T0001928;gene_name=ENSG00000304207;ID=exon:HG002_chrY_T0001928:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24717461	24719836	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001928;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001928;transcript_name=HG002_chrY_T0001928;gene_name=ENSG00000304207;ID=intron:HG002_chrY_T0001928:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24719837	24719958	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001928;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001928;transcript_name=HG002_chrY_T0001928;gene_name=ENSG00000304207;ID=exon:HG002_chrY_T0001928:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24719959	24723913	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001928;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001928;transcript_name=HG002_chrY_T0001928;gene_name=ENSG00000304207;ID=intron:HG002_chrY_T0001928:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24723914	24724076	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001928;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001928;transcript_name=HG002_chrY_T0001928;gene_name=ENSG00000304207;ID=exon:HG002_chrY_T0001928:4;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24724077	24724824	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001928;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001928;transcript_name=HG002_chrY_T0001928;gene_name=ENSG00000304207;ID=intron:HG002_chrY_T0001928:4;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24724825	24724929	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001928;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001928;transcript_name=HG002_chrY_T0001928;gene_name=ENSG00000304207;ID=exon:HG002_chrY_T0001928:5;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24709535	24724930	1000	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001929;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_G0000673;transcript_name=HG002_chrY_T0001929;gene_name=ENSG00000304207;ID=HG002_chrY_T0001929;Name=ENSG00000304207
HG002_chrY	CAT	exon	24709535	24709970	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001929;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001929;transcript_name=HG002_chrY_T0001929;gene_name=ENSG00000304207;ID=exon:HG002_chrY_T0001929:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24709971	24716197	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001929;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001929;transcript_name=HG002_chrY_T0001929;gene_name=ENSG00000304207;ID=intron:HG002_chrY_T0001929:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24716198	24716282	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001929;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001929;transcript_name=HG002_chrY_T0001929;gene_name=ENSG00000304207;ID=exon:HG002_chrY_T0001929:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24716283	24719820	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001929;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001929;transcript_name=HG002_chrY_T0001929;gene_name=ENSG00000304207;ID=intron:HG002_chrY_T0001929:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24719821	24719958	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001929;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001929;transcript_name=HG002_chrY_T0001929;gene_name=ENSG00000304207;ID=exon:HG002_chrY_T0001929:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24719959	24724824	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001929;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001929;transcript_name=HG002_chrY_T0001929;gene_name=ENSG00000304207;ID=intron:HG002_chrY_T0001929:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24724825	24724930	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001929;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001929;transcript_name=HG002_chrY_T0001929;gene_name=ENSG00000304207;ID=exon:HG002_chrY_T0001929:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24709535	24724922	1000	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001930;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_G0000673;transcript_name=HG002_chrY_T0001930;gene_name=ENSG00000304207;ID=HG002_chrY_T0001930;Name=ENSG00000304207
HG002_chrY	CAT	exon	24709535	24709970	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001930;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001930;transcript_name=HG002_chrY_T0001930;gene_name=ENSG00000304207;ID=exon:HG002_chrY_T0001930:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24709971	24716197	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001930;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001930;transcript_name=HG002_chrY_T0001930;gene_name=ENSG00000304207;ID=intron:HG002_chrY_T0001930:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24716198	24716282	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001930;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001930;transcript_name=HG002_chrY_T0001930;gene_name=ENSG00000304207;ID=exon:HG002_chrY_T0001930:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24716283	24719836	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001930;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001930;transcript_name=HG002_chrY_T0001930;gene_name=ENSG00000304207;ID=intron:HG002_chrY_T0001930:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24719837	24719958	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001930;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001930;transcript_name=HG002_chrY_T0001930;gene_name=ENSG00000304207;ID=exon:HG002_chrY_T0001930:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24719959	24723913	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001930;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001930;transcript_name=HG002_chrY_T0001930;gene_name=ENSG00000304207;ID=intron:HG002_chrY_T0001930:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24723914	24724076	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001930;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001930;transcript_name=HG002_chrY_T0001930;gene_name=ENSG00000304207;ID=exon:HG002_chrY_T0001930:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24724077	24724824	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001930;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001930;transcript_name=HG002_chrY_T0001930;gene_name=ENSG00000304207;ID=intron:HG002_chrY_T0001930:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24724825	24724922	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001930;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001930;transcript_name=HG002_chrY_T0001930;gene_name=ENSG00000304207;ID=exon:HG002_chrY_T0001930:4;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24709548	24724871	1000	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001931;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_G0000673;transcript_name=HG002_chrY_T0001931;gene_name=ENSG00000304207;ID=HG002_chrY_T0001931;Name=ENSG00000304207
HG002_chrY	CAT	exon	24709548	24709970	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001931;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001931;transcript_name=HG002_chrY_T0001931;gene_name=ENSG00000304207;ID=exon:HG002_chrY_T0001931:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24709971	24716197	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001931;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001931;transcript_name=HG002_chrY_T0001931;gene_name=ENSG00000304207;ID=intron:HG002_chrY_T0001931:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24716198	24716282	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001931;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001931;transcript_name=HG002_chrY_T0001931;gene_name=ENSG00000304207;ID=exon:HG002_chrY_T0001931:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24716283	24717375	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001931;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001931;transcript_name=HG002_chrY_T0001931;gene_name=ENSG00000304207;ID=intron:HG002_chrY_T0001931:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24717376	24717460	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001931;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001931;transcript_name=HG002_chrY_T0001931;gene_name=ENSG00000304207;ID=exon:HG002_chrY_T0001931:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24717461	24719820	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001931;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001931;transcript_name=HG002_chrY_T0001931;gene_name=ENSG00000304207;ID=intron:HG002_chrY_T0001931:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24719821	24719958	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001931;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001931;transcript_name=HG002_chrY_T0001931;gene_name=ENSG00000304207;ID=exon:HG002_chrY_T0001931:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24719959	24723913	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001931;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001931;transcript_name=HG002_chrY_T0001931;gene_name=ENSG00000304207;ID=intron:HG002_chrY_T0001931:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24723914	24724076	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001931;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001931;transcript_name=HG002_chrY_T0001931;gene_name=ENSG00000304207;ID=exon:HG002_chrY_T0001931:4;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24724077	24724824	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001931;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001931;transcript_name=HG002_chrY_T0001931;gene_name=ENSG00000304207;ID=intron:HG002_chrY_T0001931:4;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24724825	24724871	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001931;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001931;transcript_name=HG002_chrY_T0001931;gene_name=ENSG00000304207;ID=exon:HG002_chrY_T0001931:5;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24709548	24724913	1000	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001932;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_G0000673;transcript_name=HG002_chrY_T0001932;gene_name=ENSG00000304207;ID=HG002_chrY_T0001932;Name=ENSG00000304207
HG002_chrY	CAT	exon	24709548	24709970	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001932;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001932;transcript_name=HG002_chrY_T0001932;gene_name=ENSG00000304207;ID=exon:HG002_chrY_T0001932:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24709971	24716197	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001932;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001932;transcript_name=HG002_chrY_T0001932;gene_name=ENSG00000304207;ID=intron:HG002_chrY_T0001932:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24716198	24716282	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001932;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001932;transcript_name=HG002_chrY_T0001932;gene_name=ENSG00000304207;ID=exon:HG002_chrY_T0001932:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24716283	24717375	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001932;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001932;transcript_name=HG002_chrY_T0001932;gene_name=ENSG00000304207;ID=intron:HG002_chrY_T0001932:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24717376	24717460	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001932;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001932;transcript_name=HG002_chrY_T0001932;gene_name=ENSG00000304207;ID=exon:HG002_chrY_T0001932:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24717461	24719820	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001932;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001932;transcript_name=HG002_chrY_T0001932;gene_name=ENSG00000304207;ID=intron:HG002_chrY_T0001932:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24719821	24719958	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001932;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001932;transcript_name=HG002_chrY_T0001932;gene_name=ENSG00000304207;ID=exon:HG002_chrY_T0001932:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24719959	24724824	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001932;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001932;transcript_name=HG002_chrY_T0001932;gene_name=ENSG00000304207;ID=intron:HG002_chrY_T0001932:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24724825	24724913	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001932;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001932;transcript_name=HG002_chrY_T0001932;gene_name=ENSG00000304207;ID=exon:HG002_chrY_T0001932:4;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24709781	24724221	1000	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001933;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_G0000673;transcript_name=HG002_chrY_T0001933;gene_name=ENSG00000304207;ID=HG002_chrY_T0001933;Name=ENSG00000304207
HG002_chrY	CAT	exon	24709781	24709970	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001933;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001933;transcript_name=HG002_chrY_T0001933;gene_name=ENSG00000304207;ID=exon:HG002_chrY_T0001933:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24709971	24716197	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001933;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001933;transcript_name=HG002_chrY_T0001933;gene_name=ENSG00000304207;ID=intron:HG002_chrY_T0001933:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24716198	24716282	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001933;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001933;transcript_name=HG002_chrY_T0001933;gene_name=ENSG00000304207;ID=exon:HG002_chrY_T0001933:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24716283	24717375	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001933;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001933;transcript_name=HG002_chrY_T0001933;gene_name=ENSG00000304207;ID=intron:HG002_chrY_T0001933:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24717376	24717460	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001933;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001933;transcript_name=HG002_chrY_T0001933;gene_name=ENSG00000304207;ID=exon:HG002_chrY_T0001933:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24717461	24719836	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001933;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001933;transcript_name=HG002_chrY_T0001933;gene_name=ENSG00000304207;ID=intron:HG002_chrY_T0001933:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24719837	24719958	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001933;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001933;transcript_name=HG002_chrY_T0001933;gene_name=ENSG00000304207;ID=exon:HG002_chrY_T0001933:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24719959	24723913	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001933;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001933;transcript_name=HG002_chrY_T0001933;gene_name=ENSG00000304207;ID=intron:HG002_chrY_T0001933:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24723914	24724221	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG002_chrY_T0001933;gene_id=HG002_chrY_G0000673;Parent=HG002_chrY_T0001933;transcript_name=HG002_chrY_T0001933;gene_name=ENSG00000304207;ID=exon:HG002_chrY_T0001933:4;Name=ENSG00000304207;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24756281	24758192	.	-	.	source_gene_common_name=CDY19P;source_gene=ENSG00000237823.1;gene_id=HG002_chrY_G0000674;gene_biotype=unprocessed_pseudogene;gene_name=CDY19P;gene_sources=liftoff;ID=HG002_chrY_G0000674;Name=CDY19P
HG002_chrY	CAT	transcript	24756281	24758192	1000	-	.	source_transcript=ENST00000411668.1;source_transcript_name=CDY19P-201;source_gene=ENSG00000237823.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237823.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000411668.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411668.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY19P;transcript_id=HG002_chrY_T0001934;gene_id=HG002_chrY_G0000674;Parent=HG002_chrY_G0000674;transcript_name=HG002_chrY_T0001934;gene_name=CDY19P;ID=HG002_chrY_T0001934;Name=CDY19P
HG002_chrY	CAT	exon	24756281	24757722	.	-	.	source_transcript=ENST00000411668.1;source_transcript_name=CDY19P-201;source_gene=ENSG00000237823.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237823.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000411668.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY19P;transcript_id=HG002_chrY_T0001934;gene_id=HG002_chrY_G0000674;Parent=HG002_chrY_T0001934;transcript_name=HG002_chrY_T0001934;gene_name=CDY19P;ID=exon:HG002_chrY_T0001934:0;Name=CDY19P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24757723	24758021	.	-	.	source_transcript=ENST00000411668.1;source_transcript_name=CDY19P-201;source_gene=ENSG00000237823.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237823.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000411668.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY19P;transcript_id=HG002_chrY_T0001934;gene_id=HG002_chrY_G0000674;Parent=HG002_chrY_T0001934;transcript_name=HG002_chrY_T0001934;gene_name=CDY19P;ID=intron:HG002_chrY_T0001934:0;Name=CDY19P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24758022	24758192	.	-	.	source_transcript=ENST00000411668.1;source_transcript_name=CDY19P-201;source_gene=ENSG00000237823.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237823.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000411668.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY19P;transcript_id=HG002_chrY_T0001934;gene_id=HG002_chrY_G0000674;Parent=HG002_chrY_T0001934;transcript_name=HG002_chrY_T0001934;gene_name=CDY19P;ID=exon:HG002_chrY_T0001934:1;Name=CDY19P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24771949	24780603	.	+	.	source_gene_common_name=USP9YP36;source_gene=ENSG00000229709.1;gene_id=HG002_chrY_G0000675;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP36;gene_sources=liftoff;ID=HG002_chrY_G0000675;Name=USP9YP36
HG002_chrY	CAT	transcript	24771949	24780603	1000	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;transcript_id=HG002_chrY_T0001935;gene_id=HG002_chrY_G0000675;Parent=HG002_chrY_G0000675;transcript_name=HG002_chrY_T0001935;gene_name=USP9YP36;ID=HG002_chrY_T0001935;Name=USP9YP36
HG002_chrY	CAT	exon	24771949	24772154	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;transcript_id=HG002_chrY_T0001935;gene_id=HG002_chrY_G0000675;Parent=HG002_chrY_T0001935;transcript_name=HG002_chrY_T0001935;gene_name=USP9YP36;ID=exon:HG002_chrY_T0001935:0;Name=USP9YP36;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24772155	24774317	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;transcript_id=HG002_chrY_T0001935;gene_id=HG002_chrY_G0000675;Parent=HG002_chrY_T0001935;transcript_name=HG002_chrY_T0001935;gene_name=USP9YP36;ID=intron:HG002_chrY_T0001935:0;Name=USP9YP36;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24774318	24774541	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;transcript_id=HG002_chrY_T0001935;gene_id=HG002_chrY_G0000675;Parent=HG002_chrY_T0001935;transcript_name=HG002_chrY_T0001935;gene_name=USP9YP36;ID=exon:HG002_chrY_T0001935:1;Name=USP9YP36;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24774542	24776345	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;transcript_id=HG002_chrY_T0001935;gene_id=HG002_chrY_G0000675;Parent=HG002_chrY_T0001935;transcript_name=HG002_chrY_T0001935;gene_name=USP9YP36;ID=intron:HG002_chrY_T0001935:1;Name=USP9YP36;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24776346	24776524	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;transcript_id=HG002_chrY_T0001935;gene_id=HG002_chrY_G0000675;Parent=HG002_chrY_T0001935;transcript_name=HG002_chrY_T0001935;gene_name=USP9YP36;ID=exon:HG002_chrY_T0001935:2;Name=USP9YP36;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24776525	24778336	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;transcript_id=HG002_chrY_T0001935;gene_id=HG002_chrY_G0000675;Parent=HG002_chrY_T0001935;transcript_name=HG002_chrY_T0001935;gene_name=USP9YP36;ID=intron:HG002_chrY_T0001935:2;Name=USP9YP36;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24778337	24778426	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;transcript_id=HG002_chrY_T0001935;gene_id=HG002_chrY_G0000675;Parent=HG002_chrY_T0001935;transcript_name=HG002_chrY_T0001935;gene_name=USP9YP36;ID=exon:HG002_chrY_T0001935:3;Name=USP9YP36;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24778427	24780473	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;transcript_id=HG002_chrY_T0001935;gene_id=HG002_chrY_G0000675;Parent=HG002_chrY_T0001935;transcript_name=HG002_chrY_T0001935;gene_name=USP9YP36;ID=intron:HG002_chrY_T0001935:3;Name=USP9YP36;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24780474	24780603	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;transcript_id=HG002_chrY_T0001935;gene_id=HG002_chrY_G0000675;Parent=HG002_chrY_T0001935;transcript_name=HG002_chrY_T0001935;gene_name=USP9YP36;ID=exon:HG002_chrY_T0001935:4;Name=USP9YP36;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24782482	24784504	.	-	.	source_gene_common_name=USP9YP33;source_gene=ENSG00000232064.1;gene_id=HG002_chrY_G0000676;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP33;gene_sources=liftoff;ID=HG002_chrY_G0000676;Name=USP9YP33
HG002_chrY	CAT	transcript	24782482	24784504	1000	-	.	source_transcript=ENST00000412220.1;source_transcript_name=USP9YP33-201;source_gene=ENSG00000232064.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232064.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412220.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP33;transcript_id=HG002_chrY_T0001936;gene_id=HG002_chrY_G0000676;Parent=HG002_chrY_G0000676;transcript_name=HG002_chrY_T0001936;gene_name=USP9YP33;ID=HG002_chrY_T0001936;Name=USP9YP33
HG002_chrY	CAT	exon	24782482	24782672	.	-	.	source_transcript=ENST00000412220.1;source_transcript_name=USP9YP33-201;source_gene=ENSG00000232064.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232064.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412220.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP33;transcript_id=HG002_chrY_T0001936;gene_id=HG002_chrY_G0000676;Parent=HG002_chrY_T0001936;transcript_name=HG002_chrY_T0001936;gene_name=USP9YP33;ID=exon:HG002_chrY_T0001936:0;Name=USP9YP33;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24782673	24784274	.	-	.	source_transcript=ENST00000412220.1;source_transcript_name=USP9YP33-201;source_gene=ENSG00000232064.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232064.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412220.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP33;transcript_id=HG002_chrY_T0001936;gene_id=HG002_chrY_G0000676;Parent=HG002_chrY_T0001936;transcript_name=HG002_chrY_T0001936;gene_name=USP9YP33;ID=intron:HG002_chrY_T0001936:0;Name=USP9YP33;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24784275	24784504	.	-	.	source_transcript=ENST00000412220.1;source_transcript_name=USP9YP33-201;source_gene=ENSG00000232064.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232064.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412220.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP33;transcript_id=HG002_chrY_T0001936;gene_id=HG002_chrY_G0000676;Parent=HG002_chrY_T0001936;transcript_name=HG002_chrY_T0001936;gene_name=USP9YP33;ID=exon:HG002_chrY_T0001936:1;Name=USP9YP33;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24810808	24812417	.	+	.	source_gene_common_name=CDY20P;source_gene=ENSG00000225609.1;gene_id=HG002_chrY_G0000677;gene_biotype=unprocessed_pseudogene;gene_name=CDY20P;gene_sources=liftoff;ID=HG002_chrY_G0000677;Name=CDY20P
HG002_chrY	CAT	transcript	24810808	24812417	1000	+	.	source_transcript=ENST00000447528.1;source_transcript_name=CDY20P-201;source_gene=ENSG00000225609.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225609.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447528.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447528.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY20P;transcript_id=HG002_chrY_T0001937;gene_id=HG002_chrY_G0000677;Parent=HG002_chrY_G0000677;transcript_name=HG002_chrY_T0001937;gene_name=CDY20P;ID=HG002_chrY_T0001937;Name=CDY20P
HG002_chrY	CAT	exon	24810808	24810873	.	+	.	source_transcript=ENST00000447528.1;source_transcript_name=CDY20P-201;source_gene=ENSG00000225609.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225609.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447528.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY20P;transcript_id=HG002_chrY_T0001937;gene_id=HG002_chrY_G0000677;Parent=HG002_chrY_T0001937;transcript_name=HG002_chrY_T0001937;gene_name=CDY20P;ID=exon:HG002_chrY_T0001937:0;Name=CDY20P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24810874	24811204	.	+	.	source_transcript=ENST00000447528.1;source_transcript_name=CDY20P-201;source_gene=ENSG00000225609.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225609.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447528.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY20P;transcript_id=HG002_chrY_T0001937;gene_id=HG002_chrY_G0000677;Parent=HG002_chrY_T0001937;transcript_name=HG002_chrY_T0001937;gene_name=CDY20P;ID=intron:HG002_chrY_T0001937:0;Name=CDY20P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24811205	24812417	.	+	.	source_transcript=ENST00000447528.1;source_transcript_name=CDY20P-201;source_gene=ENSG00000225609.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225609.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447528.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY20P;transcript_id=HG002_chrY_T0001937;gene_id=HG002_chrY_G0000677;Parent=HG002_chrY_T0001937;transcript_name=HG002_chrY_T0001937;gene_name=CDY20P;ID=exon:HG002_chrY_T0001937:1;Name=CDY20P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24814281	24817066	.	+	.	source_gene_common_name=CDY1;source_gene=ENSG00000172288.8;gene_id=HG002_chrY_G0000678;gene_biotype=protein_coding;gene_name=CDY1;gene_sources=liftoff;ID=HG002_chrY_G0000678;Name=CDY1
HG002_chrY	CAT	transcript	24814281	24817066	100	+	.	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG002_chrY_T0001938;gene_id=HG002_chrY_G0000678;Parent=HG002_chrY_G0000678;transcript_name=HG002_chrY_T0001938;gene_name=CDY1;ID=HG002_chrY_T0001938;Name=CDY1
HG002_chrY	CAT	exon	24814281	24816198	.	+	.	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG002_chrY_T0001938;gene_id=HG002_chrY_G0000678;Parent=HG002_chrY_T0001938;transcript_name=HG002_chrY_T0001938;gene_name=CDY1;ID=exon:HG002_chrY_T0001938:0;Name=CDY1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24814607	24816198	.	+	0	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG002_chrY_T0001938;gene_id=HG002_chrY_G0000678;Parent=HG002_chrY_T0001938;transcript_name=HG002_chrY_T0001938;gene_name=CDY1;ID=CDS:HG002_chrY_T0001938:0;Name=CDY1;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	24814607	24814609	.	+	0	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG002_chrY_T0001938;gene_id=HG002_chrY_G0000678;Parent=HG002_chrY_T0001938;transcript_name=HG002_chrY_T0001938;gene_name=CDY1;ID=start_codon:HG002_chrY_T0001938;Name=CDY1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24816199	24816618	.	+	.	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG002_chrY_T0001938;gene_id=HG002_chrY_G0000678;Parent=HG002_chrY_T0001938;transcript_name=HG002_chrY_T0001938;gene_name=CDY1;ID=intron:HG002_chrY_T0001938:0;Name=CDY1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24816619	24817066	.	+	.	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG002_chrY_T0001938;gene_id=HG002_chrY_G0000678;Parent=HG002_chrY_T0001938;transcript_name=HG002_chrY_T0001938;gene_name=CDY1;ID=exon:HG002_chrY_T0001938:1;Name=CDY1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24816619	24816691	.	+	1	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG002_chrY_T0001938;gene_id=HG002_chrY_G0000678;Parent=HG002_chrY_T0001938;transcript_name=HG002_chrY_T0001938;gene_name=CDY1;ID=CDS:HG002_chrY_T0001938:1;Name=CDY1;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	24816689	24816691	.	+	0	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG002_chrY_T0001938;gene_id=HG002_chrY_G0000678;Parent=HG002_chrY_T0001938;transcript_name=HG002_chrY_T0001938;gene_name=CDY1;ID=stop_codon:HG002_chrY_T0001938;Name=CDY1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	24814326	24816502	100	+	.	source_transcript=ENST00000361963.3;source_transcript_name=CDY1-202;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361963.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000361963.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG002_chrY_T0001939;gene_id=HG002_chrY_G0000678;Parent=HG002_chrY_G0000678;transcript_name=HG002_chrY_T0001939;gene_name=CDY1;ID=HG002_chrY_T0001939;Name=CDY1
HG002_chrY	CAT	exon	24814326	24816502	.	+	.	source_transcript=ENST00000361963.3;source_transcript_name=CDY1-202;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361963.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000361963.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG002_chrY_T0001939;gene_id=HG002_chrY_G0000678;Parent=HG002_chrY_T0001939;transcript_name=HG002_chrY_T0001939;gene_name=CDY1;ID=exon:HG002_chrY_T0001939:0;Name=CDY1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	24814607	24816229	.	+	0	source_transcript=ENST00000361963.3;source_transcript_name=CDY1-202;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361963.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000361963.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG002_chrY_T0001939;gene_id=HG002_chrY_G0000678;Parent=HG002_chrY_T0001939;transcript_name=HG002_chrY_T0001939;gene_name=CDY1;ID=CDS:HG002_chrY_T0001939:0;Name=CDY1;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	24814607	24814609	.	+	0	source_transcript=ENST00000361963.3;source_transcript_name=CDY1-202;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361963.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000361963.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG002_chrY_T0001939;gene_id=HG002_chrY_G0000678;Parent=HG002_chrY_T0001939;transcript_name=HG002_chrY_T0001939;gene_name=CDY1;ID=start_codon:HG002_chrY_T0001939;Name=CDY1;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	24816227	24816229	.	+	0	source_transcript=ENST00000361963.3;source_transcript_name=CDY1-202;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361963.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000361963.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG002_chrY_T0001939;gene_id=HG002_chrY_G0000678;Parent=HG002_chrY_T0001939;transcript_name=HG002_chrY_T0001939;gene_name=CDY1;ID=stop_codon:HG002_chrY_T0001939;Name=CDY1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24855074	24855400	.	+	.	source_gene_common_name=ELOCP10;source_gene=ENSG00000234081.1;alternative_source_transcripts=ENST00000440624.1;gene_id=HG002_chrY_G0000679;gene_biotype=processed_pseudogene;gene_name=ELOCP10;gene_sources=liftoff;ID=HG002_chrY_G0000679;Name=ELOCP10
HG002_chrY	CAT	transcript	24855074	24855400	1000	+	.	source_transcript=ENST00000440624.1;source_transcript_name=ELOCP10-201;source_gene=ENSG00000234081.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234081.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000440624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440624.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP10;alternative_source_transcripts=ENST00000440624.1;transcript_id=HG002_chrY_T0001940;gene_id=HG002_chrY_G0000679;Parent=HG002_chrY_G0000679;transcript_name=HG002_chrY_T0001940;gene_name=ELOCP10;ID=HG002_chrY_T0001940;Name=ELOCP10
HG002_chrY	CAT	exon	24855074	24855400	.	+	.	source_transcript=ENST00000440624.1;source_transcript_name=ELOCP10-201;source_gene=ENSG00000234081.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234081.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000440624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP10;alternative_source_transcripts=ENST00000440624.1;transcript_id=HG002_chrY_T0001940;gene_id=HG002_chrY_G0000679;Parent=HG002_chrY_T0001940;transcript_name=HG002_chrY_T0001940;gene_name=ELOCP10;ID=exon:HG002_chrY_T0001940:0;Name=ELOCP10;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24867235	24889527	.	-	.	source_gene_common_name=OFD1P13Y;source_gene=ENSG00000225287.1;gene_id=HG002_chrY_G0000680;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P13Y;gene_sources=liftoff;ID=HG002_chrY_G0000680;Name=OFD1P13Y
HG002_chrY	CAT	transcript	24867235	24889527	1000	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG002_chrY_T0001941;gene_id=HG002_chrY_G0000680;Parent=HG002_chrY_G0000680;transcript_name=HG002_chrY_T0001941;gene_name=OFD1P13Y;ID=HG002_chrY_T0001941;Name=OFD1P13Y
HG002_chrY	CAT	exon	24867235	24867383	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG002_chrY_T0001941;gene_id=HG002_chrY_G0000680;Parent=HG002_chrY_T0001941;transcript_name=HG002_chrY_T0001941;gene_name=OFD1P13Y;ID=exon:HG002_chrY_T0001941:0;Name=OFD1P13Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24867384	24868997	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG002_chrY_T0001941;gene_id=HG002_chrY_G0000680;Parent=HG002_chrY_T0001941;transcript_name=HG002_chrY_T0001941;gene_name=OFD1P13Y;ID=intron:HG002_chrY_T0001941:0;Name=OFD1P13Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24868998	24869089	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG002_chrY_T0001941;gene_id=HG002_chrY_G0000680;Parent=HG002_chrY_T0001941;transcript_name=HG002_chrY_T0001941;gene_name=OFD1P13Y;ID=exon:HG002_chrY_T0001941:1;Name=OFD1P13Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24869090	24870194	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG002_chrY_T0001941;gene_id=HG002_chrY_G0000680;Parent=HG002_chrY_T0001941;transcript_name=HG002_chrY_T0001941;gene_name=OFD1P13Y;ID=intron:HG002_chrY_T0001941:1;Name=OFD1P13Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24870195	24870268	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG002_chrY_T0001941;gene_id=HG002_chrY_G0000680;Parent=HG002_chrY_T0001941;transcript_name=HG002_chrY_T0001941;gene_name=OFD1P13Y;ID=exon:HG002_chrY_T0001941:2;Name=OFD1P13Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24870269	24872044	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG002_chrY_T0001941;gene_id=HG002_chrY_G0000680;Parent=HG002_chrY_T0001941;transcript_name=HG002_chrY_T0001941;gene_name=OFD1P13Y;ID=intron:HG002_chrY_T0001941:2;Name=OFD1P13Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24872045	24872161	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG002_chrY_T0001941;gene_id=HG002_chrY_G0000680;Parent=HG002_chrY_T0001941;transcript_name=HG002_chrY_T0001941;gene_name=OFD1P13Y;ID=exon:HG002_chrY_T0001941:3;Name=OFD1P13Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24872162	24874266	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG002_chrY_T0001941;gene_id=HG002_chrY_G0000680;Parent=HG002_chrY_T0001941;transcript_name=HG002_chrY_T0001941;gene_name=OFD1P13Y;ID=intron:HG002_chrY_T0001941:3;Name=OFD1P13Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24874267	24874372	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG002_chrY_T0001941;gene_id=HG002_chrY_G0000680;Parent=HG002_chrY_T0001941;transcript_name=HG002_chrY_T0001941;gene_name=OFD1P13Y;ID=exon:HG002_chrY_T0001941:4;Name=OFD1P13Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24874373	24877416	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG002_chrY_T0001941;gene_id=HG002_chrY_G0000680;Parent=HG002_chrY_T0001941;transcript_name=HG002_chrY_T0001941;gene_name=OFD1P13Y;ID=intron:HG002_chrY_T0001941:4;Name=OFD1P13Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24877417	24877552	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG002_chrY_T0001941;gene_id=HG002_chrY_G0000680;Parent=HG002_chrY_T0001941;transcript_name=HG002_chrY_T0001941;gene_name=OFD1P13Y;ID=exon:HG002_chrY_T0001941:5;Name=OFD1P13Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24877553	24877891	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG002_chrY_T0001941;gene_id=HG002_chrY_G0000680;Parent=HG002_chrY_T0001941;transcript_name=HG002_chrY_T0001941;gene_name=OFD1P13Y;ID=intron:HG002_chrY_T0001941:5;Name=OFD1P13Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24877892	24878024	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG002_chrY_T0001941;gene_id=HG002_chrY_G0000680;Parent=HG002_chrY_T0001941;transcript_name=HG002_chrY_T0001941;gene_name=OFD1P13Y;ID=exon:HG002_chrY_T0001941:6;Name=OFD1P13Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24878025	24885501	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG002_chrY_T0001941;gene_id=HG002_chrY_G0000680;Parent=HG002_chrY_T0001941;transcript_name=HG002_chrY_T0001941;gene_name=OFD1P13Y;ID=intron:HG002_chrY_T0001941:6;Name=OFD1P13Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24885502	24885560	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG002_chrY_T0001941;gene_id=HG002_chrY_G0000680;Parent=HG002_chrY_T0001941;transcript_name=HG002_chrY_T0001941;gene_name=OFD1P13Y;ID=exon:HG002_chrY_T0001941:7;Name=OFD1P13Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24885561	24885645	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG002_chrY_T0001941;gene_id=HG002_chrY_G0000680;Parent=HG002_chrY_T0001941;transcript_name=HG002_chrY_T0001941;gene_name=OFD1P13Y;ID=intron:HG002_chrY_T0001941:7;Name=OFD1P13Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24885646	24885714	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG002_chrY_T0001941;gene_id=HG002_chrY_G0000680;Parent=HG002_chrY_T0001941;transcript_name=HG002_chrY_T0001941;gene_name=OFD1P13Y;ID=exon:HG002_chrY_T0001941:8;Name=OFD1P13Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24885715	24887922	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG002_chrY_T0001941;gene_id=HG002_chrY_G0000680;Parent=HG002_chrY_T0001941;transcript_name=HG002_chrY_T0001941;gene_name=OFD1P13Y;ID=intron:HG002_chrY_T0001941:8;Name=OFD1P13Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24887923	24888121	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG002_chrY_T0001941;gene_id=HG002_chrY_G0000680;Parent=HG002_chrY_T0001941;transcript_name=HG002_chrY_T0001941;gene_name=OFD1P13Y;ID=exon:HG002_chrY_T0001941:9;Name=OFD1P13Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24888122	24889429	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG002_chrY_T0001941;gene_id=HG002_chrY_G0000680;Parent=HG002_chrY_T0001941;transcript_name=HG002_chrY_T0001941;gene_name=OFD1P13Y;ID=intron:HG002_chrY_T0001941:9;Name=OFD1P13Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24889430	24889527	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG002_chrY_T0001941;gene_id=HG002_chrY_G0000680;Parent=HG002_chrY_T0001941;transcript_name=HG002_chrY_T0001941;gene_name=OFD1P13Y;ID=exon:HG002_chrY_T0001941:10;Name=OFD1P13Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24891632	24894743	.	+	.	source_gene_common_name=TRAPPC2P5;source_gene=ENSG00000225256.1;gene_id=HG002_chrY_G0000681;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P5;gene_sources=liftoff;ID=HG002_chrY_G0000681;Name=TRAPPC2P5
HG002_chrY	CAT	transcript	24891632	24894743	1000	+	.	source_transcript=ENST00000426293.1;source_transcript_name=TRAPPC2P5-201;source_gene=ENSG00000225256.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225256.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426293.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P5;transcript_id=HG002_chrY_T0001942;gene_id=HG002_chrY_G0000681;Parent=HG002_chrY_G0000681;transcript_name=HG002_chrY_T0001942;gene_name=TRAPPC2P5;ID=HG002_chrY_T0001942;Name=TRAPPC2P5
HG002_chrY	CAT	exon	24891632	24891724	.	+	.	source_transcript=ENST00000426293.1;source_transcript_name=TRAPPC2P5-201;source_gene=ENSG00000225256.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225256.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426293.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P5;transcript_id=HG002_chrY_T0001942;gene_id=HG002_chrY_G0000681;Parent=HG002_chrY_T0001942;transcript_name=HG002_chrY_T0001942;gene_name=TRAPPC2P5;ID=exon:HG002_chrY_T0001942:0;Name=TRAPPC2P5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24891725	24894087	.	+	.	source_transcript=ENST00000426293.1;source_transcript_name=TRAPPC2P5-201;source_gene=ENSG00000225256.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225256.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426293.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P5;transcript_id=HG002_chrY_T0001942;gene_id=HG002_chrY_G0000681;Parent=HG002_chrY_T0001942;transcript_name=HG002_chrY_T0001942;gene_name=TRAPPC2P5;ID=intron:HG002_chrY_T0001942:0;Name=TRAPPC2P5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24894088	24894222	.	+	.	source_transcript=ENST00000426293.1;source_transcript_name=TRAPPC2P5-201;source_gene=ENSG00000225256.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225256.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426293.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P5;transcript_id=HG002_chrY_T0001942;gene_id=HG002_chrY_G0000681;Parent=HG002_chrY_T0001942;transcript_name=HG002_chrY_T0001942;gene_name=TRAPPC2P5;ID=exon:HG002_chrY_T0001942:1;Name=TRAPPC2P5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24894223	24894663	.	+	.	source_transcript=ENST00000426293.1;source_transcript_name=TRAPPC2P5-201;source_gene=ENSG00000225256.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225256.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426293.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P5;transcript_id=HG002_chrY_T0001942;gene_id=HG002_chrY_G0000681;Parent=HG002_chrY_T0001942;transcript_name=HG002_chrY_T0001942;gene_name=TRAPPC2P5;ID=intron:HG002_chrY_T0001942:1;Name=TRAPPC2P5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24894664	24894743	.	+	.	source_transcript=ENST00000426293.1;source_transcript_name=TRAPPC2P5-201;source_gene=ENSG00000225256.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225256.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426293.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P5;transcript_id=HG002_chrY_T0001942;gene_id=HG002_chrY_G0000681;Parent=HG002_chrY_T0001942;transcript_name=HG002_chrY_T0001942;gene_name=TRAPPC2P5;ID=exon:HG002_chrY_T0001942:2;Name=TRAPPC2P5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24902089	24905738	.	-	.	source_gene_common_name=RAB9AP2;source_gene=ENSG00000223856.1;gene_id=HG002_chrY_G0000682;gene_biotype=unprocessed_pseudogene;gene_name=RAB9AP2;gene_sources=liftoff;ID=HG002_chrY_G0000682;Name=RAB9AP2
HG002_chrY	CAT	transcript	24902089	24905738	1000	-	.	source_transcript=ENST00000443911.1;source_transcript_name=RAB9AP2-201;source_gene=ENSG00000223856.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223856.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443911.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443911.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP2;transcript_id=HG002_chrY_T0001943;gene_id=HG002_chrY_G0000682;Parent=HG002_chrY_G0000682;transcript_name=HG002_chrY_T0001943;gene_name=RAB9AP2;ID=HG002_chrY_T0001943;Name=RAB9AP2
HG002_chrY	CAT	exon	24902089	24902451	.	-	.	source_transcript=ENST00000443911.1;source_transcript_name=RAB9AP2-201;source_gene=ENSG00000223856.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223856.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443911.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443911.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP2;transcript_id=HG002_chrY_T0001943;gene_id=HG002_chrY_G0000682;Parent=HG002_chrY_T0001943;transcript_name=HG002_chrY_T0001943;gene_name=RAB9AP2;ID=exon:HG002_chrY_T0001943:0;Name=RAB9AP2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24902452	24905504	.	-	.	source_transcript=ENST00000443911.1;source_transcript_name=RAB9AP2-201;source_gene=ENSG00000223856.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223856.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443911.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443911.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP2;transcript_id=HG002_chrY_T0001943;gene_id=HG002_chrY_G0000682;Parent=HG002_chrY_T0001943;transcript_name=HG002_chrY_T0001943;gene_name=RAB9AP2;ID=intron:HG002_chrY_T0001943:0;Name=RAB9AP2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24905505	24905738	.	-	.	source_transcript=ENST00000443911.1;source_transcript_name=RAB9AP2-201;source_gene=ENSG00000223856.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223856.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443911.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443911.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP2;transcript_id=HG002_chrY_T0001943;gene_id=HG002_chrY_G0000682;Parent=HG002_chrY_T0001943;transcript_name=HG002_chrY_T0001943;gene_name=RAB9AP2;ID=exon:HG002_chrY_T0001943:1;Name=RAB9AP2;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24915201	24916371	.	+	.	source_gene_common_name=USP9YP30;source_gene=ENSG00000235004.1;gene_id=HG002_chrY_G0000683;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP30;gene_sources=liftoff;ID=HG002_chrY_G0000683;Name=USP9YP30
HG002_chrY	CAT	transcript	24915201	24916371	1000	+	.	source_transcript=ENST00000430729.1;source_transcript_name=USP9YP30-201;source_gene=ENSG00000235004.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235004.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP30;transcript_id=HG002_chrY_T0001944;gene_id=HG002_chrY_G0000683;Parent=HG002_chrY_G0000683;transcript_name=HG002_chrY_T0001944;gene_name=USP9YP30;ID=HG002_chrY_T0001944;Name=USP9YP30
HG002_chrY	CAT	exon	24915201	24915366	.	+	.	source_transcript=ENST00000430729.1;source_transcript_name=USP9YP30-201;source_gene=ENSG00000235004.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235004.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP30;transcript_id=HG002_chrY_T0001944;gene_id=HG002_chrY_G0000683;Parent=HG002_chrY_T0001944;transcript_name=HG002_chrY_T0001944;gene_name=USP9YP30;ID=exon:HG002_chrY_T0001944:0;Name=USP9YP30;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24915367	24915701	.	+	.	source_transcript=ENST00000430729.1;source_transcript_name=USP9YP30-201;source_gene=ENSG00000235004.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235004.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP30;transcript_id=HG002_chrY_T0001944;gene_id=HG002_chrY_G0000683;Parent=HG002_chrY_T0001944;transcript_name=HG002_chrY_T0001944;gene_name=USP9YP30;ID=intron:HG002_chrY_T0001944:0;Name=USP9YP30;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24915702	24915895	.	+	.	source_transcript=ENST00000430729.1;source_transcript_name=USP9YP30-201;source_gene=ENSG00000235004.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235004.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP30;transcript_id=HG002_chrY_T0001944;gene_id=HG002_chrY_G0000683;Parent=HG002_chrY_T0001944;transcript_name=HG002_chrY_T0001944;gene_name=USP9YP30;ID=exon:HG002_chrY_T0001944:1;Name=USP9YP30;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24915896	24916276	.	+	.	source_transcript=ENST00000430729.1;source_transcript_name=USP9YP30-201;source_gene=ENSG00000235004.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235004.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP30;transcript_id=HG002_chrY_T0001944;gene_id=HG002_chrY_G0000683;Parent=HG002_chrY_T0001944;transcript_name=HG002_chrY_T0001944;gene_name=USP9YP30;ID=intron:HG002_chrY_T0001944:1;Name=USP9YP30;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24916277	24916371	.	+	.	source_transcript=ENST00000430729.1;source_transcript_name=USP9YP30-201;source_gene=ENSG00000235004.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235004.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP30;transcript_id=HG002_chrY_T0001944;gene_id=HG002_chrY_G0000683;Parent=HG002_chrY_T0001944;transcript_name=HG002_chrY_T0001944;gene_name=USP9YP30;ID=exon:HG002_chrY_T0001944:2;Name=USP9YP30;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24915527	24915680	.	+	.	source_gene_common_name=RNU1-107P;source_gene=ENSG00000252426.1;alternative_source_transcripts=ENST00000516108.1;gene_id=HG002_chrY_G0000684;gene_biotype=snRNA;gene_name=RNU1-107P;gene_sources=liftoff;ID=HG002_chrY_G0000684;Name=RNU1-107P
HG002_chrY	CAT	transcript	24915527	24915680	1000	+	.	source_transcript=ENST00000516617.1;source_transcript_name=RNU1-107P-201;source_gene=ENSG00000252426.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252426.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516617.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-107P;alternative_source_transcripts=ENST00000516108.1;transcript_id=HG002_chrY_T0001945;gene_id=HG002_chrY_G0000684;Parent=HG002_chrY_G0000684;transcript_name=HG002_chrY_T0001945;gene_name=RNU1-107P;ID=HG002_chrY_T0001945;Name=RNU1-107P
HG002_chrY	CAT	exon	24915527	24915680	.	+	.	source_transcript=ENST00000516617.1;source_transcript_name=RNU1-107P-201;source_gene=ENSG00000252426.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252426.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-107P;alternative_source_transcripts=ENST00000516108.1;transcript_id=HG002_chrY_T0001945;gene_id=HG002_chrY_G0000684;Parent=HG002_chrY_T0001945;transcript_name=HG002_chrY_T0001945;gene_name=RNU1-107P;ID=exon:HG002_chrY_T0001945:0;Name=RNU1-107P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24920675	24925570	.	+	.	source_gene_common_name=TTTY3;source_gene=ENSG00000231141.1;alternative_source_transcripts=ENST00000631331.1;gene_id=HG002_chrY_G0000685;gene_biotype=lncRNA;gene_name=TTTY3;gene_sources=liftoff;ID=HG002_chrY_G0000685;Name=TTTY3
HG002_chrY	CAT	transcript	24920675	24925570	1000	+	.	source_transcript=ENST00000417334.1;source_transcript_name=TTTY3-201;source_gene=ENSG00000231141.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231141.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417334.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=ENST00000631331.1;transcript_id=HG002_chrY_T0001946;gene_id=HG002_chrY_G0000685;Parent=HG002_chrY_G0000685;transcript_name=HG002_chrY_T0001946;gene_name=TTTY3;ID=HG002_chrY_T0001946;Name=TTTY3
HG002_chrY	CAT	exon	24920675	24920778	.	+	.	source_transcript=ENST00000417334.1;source_transcript_name=TTTY3-201;source_gene=ENSG00000231141.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231141.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=ENST00000631331.1;transcript_id=HG002_chrY_T0001946;gene_id=HG002_chrY_G0000685;Parent=HG002_chrY_T0001946;transcript_name=HG002_chrY_T0001946;gene_name=TTTY3;ID=exon:HG002_chrY_T0001946:0;Name=TTTY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24920779	24922976	.	+	.	source_transcript=ENST00000417334.1;source_transcript_name=TTTY3-201;source_gene=ENSG00000231141.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231141.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=ENST00000631331.1;transcript_id=HG002_chrY_T0001946;gene_id=HG002_chrY_G0000685;Parent=HG002_chrY_T0001946;transcript_name=HG002_chrY_T0001946;gene_name=TTTY3;ID=intron:HG002_chrY_T0001946:0;Name=TTTY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24922977	24923111	.	+	.	source_transcript=ENST00000417334.1;source_transcript_name=TTTY3-201;source_gene=ENSG00000231141.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231141.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=ENST00000631331.1;transcript_id=HG002_chrY_T0001946;gene_id=HG002_chrY_G0000685;Parent=HG002_chrY_T0001946;transcript_name=HG002_chrY_T0001946;gene_name=TTTY3;ID=exon:HG002_chrY_T0001946:1;Name=TTTY3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24923112	24925465	.	+	.	source_transcript=ENST00000417334.1;source_transcript_name=TTTY3-201;source_gene=ENSG00000231141.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231141.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=ENST00000631331.1;transcript_id=HG002_chrY_T0001946;gene_id=HG002_chrY_G0000685;Parent=HG002_chrY_T0001946;transcript_name=HG002_chrY_T0001946;gene_name=TTTY3;ID=intron:HG002_chrY_T0001946:1;Name=TTTY3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24925466	24925570	.	+	.	source_transcript=ENST00000417334.1;source_transcript_name=TTTY3-201;source_gene=ENSG00000231141.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231141.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=ENST00000631331.1;transcript_id=HG002_chrY_T0001946;gene_id=HG002_chrY_G0000685;Parent=HG002_chrY_T0001946;transcript_name=HG002_chrY_T0001946;gene_name=TTTY3;ID=exon:HG002_chrY_T0001946:2;Name=TTTY3;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24922196	24927342	.	-	.	source_gene_common_name=USP9YP9;source_gene=ENSG00000232614.1;gene_id=HG002_chrY_G0000686;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP9;gene_sources=liftoff;ID=HG002_chrY_G0000686;Name=USP9YP9
HG002_chrY	CAT	transcript	24922196	24927342	1000	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;transcript_id=HG002_chrY_T0001947;gene_id=HG002_chrY_G0000686;Parent=HG002_chrY_G0000686;transcript_name=HG002_chrY_T0001947;gene_name=USP9YP9;ID=HG002_chrY_T0001947;Name=USP9YP9
HG002_chrY	CAT	exon	24922196	24922388	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;transcript_id=HG002_chrY_T0001947;gene_id=HG002_chrY_G0000686;Parent=HG002_chrY_T0001947;transcript_name=HG002_chrY_T0001947;gene_name=USP9YP9;ID=exon:HG002_chrY_T0001947:0;Name=USP9YP9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24922389	24924021	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;transcript_id=HG002_chrY_T0001947;gene_id=HG002_chrY_G0000686;Parent=HG002_chrY_T0001947;transcript_name=HG002_chrY_T0001947;gene_name=USP9YP9;ID=intron:HG002_chrY_T0001947:0;Name=USP9YP9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24924022	24924284	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;transcript_id=HG002_chrY_T0001947;gene_id=HG002_chrY_G0000686;Parent=HG002_chrY_T0001947;transcript_name=HG002_chrY_T0001947;gene_name=USP9YP9;ID=exon:HG002_chrY_T0001947:1;Name=USP9YP9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24924285	24925408	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;transcript_id=HG002_chrY_T0001947;gene_id=HG002_chrY_G0000686;Parent=HG002_chrY_T0001947;transcript_name=HG002_chrY_T0001947;gene_name=USP9YP9;ID=intron:HG002_chrY_T0001947:1;Name=USP9YP9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24925409	24925630	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;transcript_id=HG002_chrY_T0001947;gene_id=HG002_chrY_G0000686;Parent=HG002_chrY_T0001947;transcript_name=HG002_chrY_T0001947;gene_name=USP9YP9;ID=exon:HG002_chrY_T0001947:2;Name=USP9YP9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24925631	24927305	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;transcript_id=HG002_chrY_T0001947;gene_id=HG002_chrY_G0000686;Parent=HG002_chrY_T0001947;transcript_name=HG002_chrY_T0001947;gene_name=USP9YP9;ID=intron:HG002_chrY_T0001947:2;Name=USP9YP9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24927306	24927342	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;transcript_id=HG002_chrY_T0001947;gene_id=HG002_chrY_G0000686;Parent=HG002_chrY_T0001947;transcript_name=HG002_chrY_T0001947;gene_name=USP9YP9;ID=exon:HG002_chrY_T0001947:3;Name=USP9YP9;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24940778	24942389	.	-	.	source_gene_common_name=USP9YP19;source_gene=ENSG00000225326.1;gene_id=HG002_chrY_G0000687;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP19;gene_sources=liftoff;ID=HG002_chrY_G0000687;Name=USP9YP19
HG002_chrY	CAT	transcript	24940778	24942389	1000	-	.	source_transcript=ENST00000412165.1;source_transcript_name=USP9YP19-201;source_gene=ENSG00000225326.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225326.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412165.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP19;transcript_id=HG002_chrY_T0001948;gene_id=HG002_chrY_G0000687;Parent=HG002_chrY_G0000687;transcript_name=HG002_chrY_T0001948;gene_name=USP9YP19;ID=HG002_chrY_T0001948;Name=USP9YP19
HG002_chrY	CAT	exon	24940778	24941044	.	-	.	source_transcript=ENST00000412165.1;source_transcript_name=USP9YP19-201;source_gene=ENSG00000225326.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225326.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP19;transcript_id=HG002_chrY_T0001948;gene_id=HG002_chrY_G0000687;Parent=HG002_chrY_T0001948;transcript_name=HG002_chrY_T0001948;gene_name=USP9YP19;ID=exon:HG002_chrY_T0001948:0;Name=USP9YP19;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	24941045	24942171	.	-	.	source_transcript=ENST00000412165.1;source_transcript_name=USP9YP19-201;source_gene=ENSG00000225326.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225326.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP19;transcript_id=HG002_chrY_T0001948;gene_id=HG002_chrY_G0000687;Parent=HG002_chrY_T0001948;transcript_name=HG002_chrY_T0001948;gene_name=USP9YP19;ID=intron:HG002_chrY_T0001948:0;Name=USP9YP19;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	24942172	24942389	.	-	.	source_transcript=ENST00000412165.1;source_transcript_name=USP9YP19-201;source_gene=ENSG00000225326.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225326.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP19;transcript_id=HG002_chrY_T0001948;gene_id=HG002_chrY_G0000687;Parent=HG002_chrY_T0001948;transcript_name=HG002_chrY_T0001948;gene_name=USP9YP19;ID=exon:HG002_chrY_T0001948:1;Name=USP9YP19;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	24944571	24945053	.	+	.	source_gene_common_name=XKRYP4;source_gene=ENSG00000231026.1;alternative_source_transcripts=ENST00000414395.1;gene_id=HG002_chrY_G0000688;gene_biotype=unprocessed_pseudogene;gene_name=XKRYP4;gene_sources=liftoff;ID=HG002_chrY_G0000688;Name=XKRYP4
HG002_chrY	CAT	transcript	24944571	24945053	1000	+	.	source_transcript=ENST00000414395.1;source_transcript_name=XKRYP4-201;source_gene=ENSG00000231026.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231026.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414395.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414395.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP4;alternative_source_transcripts=ENST00000414395.1;transcript_id=HG002_chrY_T0001949;gene_id=HG002_chrY_G0000688;Parent=HG002_chrY_G0000688;transcript_name=HG002_chrY_T0001949;gene_name=XKRYP4;ID=HG002_chrY_T0001949;Name=XKRYP4
HG002_chrY	CAT	exon	24944571	24945053	.	+	.	source_transcript=ENST00000414395.1;source_transcript_name=XKRYP4-201;source_gene=ENSG00000231026.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231026.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414395.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414395.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP4;alternative_source_transcripts=ENST00000414395.1;transcript_id=HG002_chrY_T0001949;gene_id=HG002_chrY_G0000688;Parent=HG002_chrY_T0001949;transcript_name=HG002_chrY_T0001949;gene_name=XKRYP4;ID=exon:HG002_chrY_T0001949:0;Name=XKRYP4;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25005201	25006754	.	+	.	source_gene_common_name=CDY22P;source_gene=ENSG00000229343.1;gene_id=HG002_chrY_G0000689;gene_biotype=unprocessed_pseudogene;gene_name=CDY22P;gene_sources=liftoff;ID=HG002_chrY_G0000689;Name=CDY22P
HG002_chrY	CAT	transcript	25005201	25006754	1000	+	.	source_transcript=ENST00000451423.1;source_transcript_name=CDY22P-201;source_gene=ENSG00000229343.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229343.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000451423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451423.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY22P;transcript_id=HG002_chrY_T0001950;gene_id=HG002_chrY_G0000689;Parent=HG002_chrY_G0000689;transcript_name=HG002_chrY_T0001950;gene_name=CDY22P;ID=HG002_chrY_T0001950;Name=CDY22P
HG002_chrY	CAT	exon	25005201	25006754	.	+	.	source_transcript=ENST00000451423.1;source_transcript_name=CDY22P-201;source_gene=ENSG00000229343.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229343.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000451423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451423.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY22P;transcript_id=HG002_chrY_T0001950;gene_id=HG002_chrY_G0000689;Parent=HG002_chrY_T0001950;transcript_name=HG002_chrY_T0001950;gene_name=CDY22P;ID=exon:HG002_chrY_T0001950:0;Name=CDY22P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25053136	25053461	.	+	.	source_gene_common_name=ELOCP17;source_gene=ENSG00000232695.1;gene_id=HG002_chrY_G0000690;gene_biotype=processed_pseudogene;gene_name=ELOCP17;gene_sources=liftoff;ID=HG002_chrY_G0000690;Name=ELOCP17
HG002_chrY	CAT	transcript	25053136	25053461	1000	+	.	source_transcript=ENST00000414751.1;source_transcript_name=ELOCP17-201;source_gene=ENSG00000232695.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232695.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414751.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP17;transcript_id=HG002_chrY_T0001951;gene_id=HG002_chrY_G0000690;Parent=HG002_chrY_G0000690;transcript_name=HG002_chrY_T0001951;gene_name=ELOCP17;ID=HG002_chrY_T0001951;Name=ELOCP17
HG002_chrY	CAT	exon	25053136	25053461	.	+	.	source_transcript=ENST00000414751.1;source_transcript_name=ELOCP17-201;source_gene=ENSG00000232695.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232695.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP17;transcript_id=HG002_chrY_T0001951;gene_id=HG002_chrY_G0000690;Parent=HG002_chrY_T0001951;transcript_name=HG002_chrY_T0001951;gene_name=ELOCP17;ID=exon:HG002_chrY_T0001951:0;Name=ELOCP17;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25064132	25090870	.	-	.	source_gene_common_name=OFD1P18Y;source_gene=ENSG00000235511.1;gene_id=HG002_chrY_G0000691;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P18Y;gene_sources=liftoff;ID=HG002_chrY_G0000691;Name=OFD1P18Y
HG002_chrY	CAT	transcript	25064132	25090870	1000	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=HG002_chrY_T0001952;gene_id=HG002_chrY_G0000691;Parent=HG002_chrY_G0000691;transcript_name=HG002_chrY_T0001952;gene_name=OFD1P18Y;ID=HG002_chrY_T0001952;Name=OFD1P18Y
HG002_chrY	CAT	exon	25064132	25064203	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=HG002_chrY_T0001952;gene_id=HG002_chrY_G0000691;Parent=HG002_chrY_T0001952;transcript_name=HG002_chrY_T0001952;gene_name=OFD1P18Y;ID=exon:HG002_chrY_T0001952:0;Name=OFD1P18Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25064204	25065305	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=HG002_chrY_T0001952;gene_id=HG002_chrY_G0000691;Parent=HG002_chrY_T0001952;transcript_name=HG002_chrY_T0001952;gene_name=OFD1P18Y;ID=intron:HG002_chrY_T0001952:0;Name=OFD1P18Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25065306	25065379	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=HG002_chrY_T0001952;gene_id=HG002_chrY_G0000691;Parent=HG002_chrY_T0001952;transcript_name=HG002_chrY_T0001952;gene_name=OFD1P18Y;ID=exon:HG002_chrY_T0001952:1;Name=OFD1P18Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25065380	25067165	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=HG002_chrY_T0001952;gene_id=HG002_chrY_G0000691;Parent=HG002_chrY_T0001952;transcript_name=HG002_chrY_T0001952;gene_name=OFD1P18Y;ID=intron:HG002_chrY_T0001952:1;Name=OFD1P18Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25067166	25067284	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=HG002_chrY_T0001952;gene_id=HG002_chrY_G0000691;Parent=HG002_chrY_T0001952;transcript_name=HG002_chrY_T0001952;gene_name=OFD1P18Y;ID=exon:HG002_chrY_T0001952:2;Name=OFD1P18Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25067285	25069931	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=HG002_chrY_T0001952;gene_id=HG002_chrY_G0000691;Parent=HG002_chrY_T0001952;transcript_name=HG002_chrY_T0001952;gene_name=OFD1P18Y;ID=intron:HG002_chrY_T0001952:2;Name=OFD1P18Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25069932	25070037	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=HG002_chrY_T0001952;gene_id=HG002_chrY_G0000691;Parent=HG002_chrY_T0001952;transcript_name=HG002_chrY_T0001952;gene_name=OFD1P18Y;ID=exon:HG002_chrY_T0001952:3;Name=OFD1P18Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25070038	25073083	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=HG002_chrY_T0001952;gene_id=HG002_chrY_G0000691;Parent=HG002_chrY_T0001952;transcript_name=HG002_chrY_T0001952;gene_name=OFD1P18Y;ID=intron:HG002_chrY_T0001952:3;Name=OFD1P18Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25073084	25073231	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=HG002_chrY_T0001952;gene_id=HG002_chrY_G0000691;Parent=HG002_chrY_T0001952;transcript_name=HG002_chrY_T0001952;gene_name=OFD1P18Y;ID=exon:HG002_chrY_T0001952:4;Name=OFD1P18Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25073232	25073575	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=HG002_chrY_T0001952;gene_id=HG002_chrY_G0000691;Parent=HG002_chrY_T0001952;transcript_name=HG002_chrY_T0001952;gene_name=OFD1P18Y;ID=intron:HG002_chrY_T0001952:4;Name=OFD1P18Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25073576	25073710	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=HG002_chrY_T0001952;gene_id=HG002_chrY_G0000691;Parent=HG002_chrY_T0001952;transcript_name=HG002_chrY_T0001952;gene_name=OFD1P18Y;ID=exon:HG002_chrY_T0001952:5;Name=OFD1P18Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25073711	25089347	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=HG002_chrY_T0001952;gene_id=HG002_chrY_G0000691;Parent=HG002_chrY_T0001952;transcript_name=HG002_chrY_T0001952;gene_name=OFD1P18Y;ID=intron:HG002_chrY_T0001952:5;Name=OFD1P18Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25089348	25089553	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=HG002_chrY_T0001952;gene_id=HG002_chrY_G0000691;Parent=HG002_chrY_T0001952;transcript_name=HG002_chrY_T0001952;gene_name=OFD1P18Y;ID=exon:HG002_chrY_T0001952:6;Name=OFD1P18Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25089554	25090771	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=HG002_chrY_T0001952;gene_id=HG002_chrY_G0000691;Parent=HG002_chrY_T0001952;transcript_name=HG002_chrY_T0001952;gene_name=OFD1P18Y;ID=intron:HG002_chrY_T0001952:6;Name=OFD1P18Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25090772	25090870	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=HG002_chrY_T0001952;gene_id=HG002_chrY_G0000691;Parent=HG002_chrY_T0001952;transcript_name=HG002_chrY_T0001952;gene_name=OFD1P18Y;ID=exon:HG002_chrY_T0001952:7;Name=OFD1P18Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25096738	25099470	.	+	.	source_gene_common_name=TRAPPC2P4;source_gene=ENSG00000232914.1;gene_id=HG002_chrY_G0000692;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P4;gene_sources=liftoff;ID=HG002_chrY_G0000692;Name=TRAPPC2P4
HG002_chrY	CAT	transcript	25096738	25099470	1000	+	.	source_transcript=ENST00000421750.1;source_transcript_name=TRAPPC2P4-201;source_gene=ENSG00000232914.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232914.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421750.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P4;transcript_id=HG002_chrY_T0001953;gene_id=HG002_chrY_G0000692;Parent=HG002_chrY_G0000692;transcript_name=HG002_chrY_T0001953;gene_name=TRAPPC2P4;ID=HG002_chrY_T0001953;Name=TRAPPC2P4
HG002_chrY	CAT	exon	25096738	25096830	.	+	.	source_transcript=ENST00000421750.1;source_transcript_name=TRAPPC2P4-201;source_gene=ENSG00000232914.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232914.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P4;transcript_id=HG002_chrY_T0001953;gene_id=HG002_chrY_G0000692;Parent=HG002_chrY_T0001953;transcript_name=HG002_chrY_T0001953;gene_name=TRAPPC2P4;ID=exon:HG002_chrY_T0001953:0;Name=TRAPPC2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25096831	25098784	.	+	.	source_transcript=ENST00000421750.1;source_transcript_name=TRAPPC2P4-201;source_gene=ENSG00000232914.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232914.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P4;transcript_id=HG002_chrY_T0001953;gene_id=HG002_chrY_G0000692;Parent=HG002_chrY_T0001953;transcript_name=HG002_chrY_T0001953;gene_name=TRAPPC2P4;ID=intron:HG002_chrY_T0001953:0;Name=TRAPPC2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25098785	25098929	.	+	.	source_transcript=ENST00000421750.1;source_transcript_name=TRAPPC2P4-201;source_gene=ENSG00000232914.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232914.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P4;transcript_id=HG002_chrY_T0001953;gene_id=HG002_chrY_G0000692;Parent=HG002_chrY_T0001953;transcript_name=HG002_chrY_T0001953;gene_name=TRAPPC2P4;ID=exon:HG002_chrY_T0001953:1;Name=TRAPPC2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25098930	25099377	.	+	.	source_transcript=ENST00000421750.1;source_transcript_name=TRAPPC2P4-201;source_gene=ENSG00000232914.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232914.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P4;transcript_id=HG002_chrY_T0001953;gene_id=HG002_chrY_G0000692;Parent=HG002_chrY_T0001953;transcript_name=HG002_chrY_T0001953;gene_name=TRAPPC2P4;ID=intron:HG002_chrY_T0001953:1;Name=TRAPPC2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25099378	25099470	.	+	.	source_transcript=ENST00000421750.1;source_transcript_name=TRAPPC2P4-201;source_gene=ENSG00000232914.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232914.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P4;transcript_id=HG002_chrY_T0001953;gene_id=HG002_chrY_G0000692;Parent=HG002_chrY_T0001953;transcript_name=HG002_chrY_T0001953;gene_name=TRAPPC2P4;ID=exon:HG002_chrY_T0001953:2;Name=TRAPPC2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25110543	25111115	.	-	.	source_gene_common_name=RAB9AP3;source_gene=ENSG00000223655.1;alternative_source_transcripts=ENST00000449393.1;gene_id=HG002_chrY_G0000693;gene_biotype=processed_pseudogene;gene_name=RAB9AP3;gene_sources=liftoff;ID=HG002_chrY_G0000693;Name=RAB9AP3
HG002_chrY	CAT	transcript	25110543	25111115	1000	-	.	source_transcript=ENST00000412737.1;source_transcript_name=RAB9AP3-201;source_gene=ENSG00000223655.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223655.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000412737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412737.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP3;alternative_source_transcripts=ENST00000449393.1;transcript_id=HG002_chrY_T0001954;gene_id=HG002_chrY_G0000693;Parent=HG002_chrY_G0000693;transcript_name=HG002_chrY_T0001954;gene_name=RAB9AP3;ID=HG002_chrY_T0001954;Name=RAB9AP3
HG002_chrY	CAT	exon	25110543	25111115	.	-	.	source_transcript=ENST00000412737.1;source_transcript_name=RAB9AP3-201;source_gene=ENSG00000223655.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223655.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000412737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP3;alternative_source_transcripts=ENST00000449393.1;transcript_id=HG002_chrY_T0001954;gene_id=HG002_chrY_G0000693;Parent=HG002_chrY_T0001954;transcript_name=HG002_chrY_T0001954;gene_name=RAB9AP3;ID=exon:HG002_chrY_T0001954:0;Name=RAB9AP3;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25115608	25122049	.	+	.	source_gene_common_name=USP9YP20;source_gene=ENSG00000230854.1;gene_id=HG002_chrY_G0000694;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP20;gene_sources=liftoff;ID=HG002_chrY_G0000694;Name=USP9YP20
HG002_chrY	CAT	transcript	25115608	25122049	1000	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=HG002_chrY_T0001955;gene_id=HG002_chrY_G0000694;Parent=HG002_chrY_G0000694;transcript_name=HG002_chrY_T0001955;gene_name=USP9YP20;ID=HG002_chrY_T0001955;Name=USP9YP20
HG002_chrY	CAT	exon	25115608	25115739	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=HG002_chrY_T0001955;gene_id=HG002_chrY_G0000694;Parent=HG002_chrY_T0001955;transcript_name=HG002_chrY_T0001955;gene_name=USP9YP20;ID=exon:HG002_chrY_T0001955:0;Name=USP9YP20;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25115740	25120884	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=HG002_chrY_T0001955;gene_id=HG002_chrY_G0000694;Parent=HG002_chrY_T0001955;transcript_name=HG002_chrY_T0001955;gene_name=USP9YP20;ID=intron:HG002_chrY_T0001955:0;Name=USP9YP20;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25120885	25121022	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=HG002_chrY_T0001955;gene_id=HG002_chrY_G0000694;Parent=HG002_chrY_T0001955;transcript_name=HG002_chrY_T0001955;gene_name=USP9YP20;ID=exon:HG002_chrY_T0001955:1;Name=USP9YP20;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25121023	25121165	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=HG002_chrY_T0001955;gene_id=HG002_chrY_G0000694;Parent=HG002_chrY_T0001955;transcript_name=HG002_chrY_T0001955;gene_name=USP9YP20;ID=intron:HG002_chrY_T0001955:1;Name=USP9YP20;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25121166	25121202	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=HG002_chrY_T0001955;gene_id=HG002_chrY_G0000694;Parent=HG002_chrY_T0001955;transcript_name=HG002_chrY_T0001955;gene_name=USP9YP20;ID=exon:HG002_chrY_T0001955:2;Name=USP9YP20;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25121203	25121416	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=HG002_chrY_T0001955;gene_id=HG002_chrY_G0000694;Parent=HG002_chrY_T0001955;transcript_name=HG002_chrY_T0001955;gene_name=USP9YP20;ID=intron:HG002_chrY_T0001955:2;Name=USP9YP20;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25121417	25121574	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=HG002_chrY_T0001955;gene_id=HG002_chrY_G0000694;Parent=HG002_chrY_T0001955;transcript_name=HG002_chrY_T0001955;gene_name=USP9YP20;ID=exon:HG002_chrY_T0001955:3;Name=USP9YP20;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25121575	25121956	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=HG002_chrY_T0001955;gene_id=HG002_chrY_G0000694;Parent=HG002_chrY_T0001955;transcript_name=HG002_chrY_T0001955;gene_name=USP9YP20;ID=intron:HG002_chrY_T0001955:3;Name=USP9YP20;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25121957	25122049	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=HG002_chrY_T0001955;gene_id=HG002_chrY_G0000694;Parent=HG002_chrY_T0001955;transcript_name=HG002_chrY_T0001955;gene_name=USP9YP20;ID=exon:HG002_chrY_T0001955:4;Name=USP9YP20;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25121202	25121365	.	+	.	source_gene_common_name=RNU1-40P;source_gene=ENSG00000252625.1;gene_id=HG002_chrY_G0000695;gene_biotype=snRNA;gene_name=RNU1-40P;gene_sources=liftoff;ID=HG002_chrY_G0000695;Name=RNU1-40P
HG002_chrY	CAT	transcript	25121202	25121365	1000	+	.	source_transcript=ENST00000516816.1;source_transcript_name=RNU1-40P-201;source_gene=ENSG00000252625.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252625.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516816.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-40P;transcript_id=HG002_chrY_T0001956;gene_id=HG002_chrY_G0000695;Parent=HG002_chrY_G0000695;transcript_name=HG002_chrY_T0001956;gene_name=RNU1-40P;ID=HG002_chrY_T0001956;Name=RNU1-40P
HG002_chrY	CAT	exon	25121202	25121365	.	+	.	source_transcript=ENST00000516816.1;source_transcript_name=RNU1-40P-201;source_gene=ENSG00000252625.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252625.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-40P;transcript_id=HG002_chrY_T0001956;gene_id=HG002_chrY_G0000695;Parent=HG002_chrY_T0001956;transcript_name=HG002_chrY_T0001956;gene_name=RNU1-40P;ID=exon:HG002_chrY_T0001956:0;Name=RNU1-40P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25126056	25128104	.	-	.	source_gene_common_name=USP9YP21;source_gene=ENSG00000227635.1;gene_id=HG002_chrY_G0000696;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP21;gene_sources=liftoff;ID=HG002_chrY_G0000696;Name=USP9YP21
HG002_chrY	CAT	transcript	25126056	25128104	1000	-	.	source_transcript=ENST00000420603.1;source_transcript_name=USP9YP21-201;source_gene=ENSG00000227635.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227635.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420603.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420603.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP21;transcript_id=HG002_chrY_T0001957;gene_id=HG002_chrY_G0000696;Parent=HG002_chrY_G0000696;transcript_name=HG002_chrY_T0001957;gene_name=USP9YP21;ID=HG002_chrY_T0001957;Name=USP9YP21
HG002_chrY	CAT	exon	25126056	25126238	.	-	.	source_transcript=ENST00000420603.1;source_transcript_name=USP9YP21-201;source_gene=ENSG00000227635.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227635.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420603.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420603.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP21;transcript_id=HG002_chrY_T0001957;gene_id=HG002_chrY_G0000696;Parent=HG002_chrY_T0001957;transcript_name=HG002_chrY_T0001957;gene_name=USP9YP21;ID=exon:HG002_chrY_T0001957:0;Name=USP9YP21;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25126239	25127855	.	-	.	source_transcript=ENST00000420603.1;source_transcript_name=USP9YP21-201;source_gene=ENSG00000227635.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227635.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420603.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420603.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP21;transcript_id=HG002_chrY_T0001957;gene_id=HG002_chrY_G0000696;Parent=HG002_chrY_T0001957;transcript_name=HG002_chrY_T0001957;gene_name=USP9YP21;ID=intron:HG002_chrY_T0001957:0;Name=USP9YP21;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25127856	25128104	.	-	.	source_transcript=ENST00000420603.1;source_transcript_name=USP9YP21-201;source_gene=ENSG00000227635.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227635.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420603.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420603.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP21;transcript_id=HG002_chrY_T0001957;gene_id=HG002_chrY_G0000696;Parent=HG002_chrY_T0001957;transcript_name=HG002_chrY_T0001957;gene_name=USP9YP21;ID=exon:HG002_chrY_T0001957:1;Name=USP9YP21;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25135491	25146375	.	+	.	source_gene_common_name=XKRYP6;source_gene=ENSG00000237546.1;alternative_source_transcripts=ENST00000442113.1;gene_id=HG002_chrY_G0000697;gene_biotype=unprocessed_pseudogene;gene_name=XKRYP6;gene_sources=liftoff;ID=HG002_chrY_G0000697;Name=XKRYP6
HG002_chrY	CAT	transcript	25135491	25146375	1000	+	.	source_transcript=ENST00000440468.1;source_transcript_name=XKRYP6-201;source_gene=ENSG00000237546.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237546.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440468.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP6;alternative_source_transcripts=ENST00000442113.1;transcript_id=HG002_chrY_T0001958;gene_id=HG002_chrY_G0000697;Parent=HG002_chrY_G0000697;transcript_name=HG002_chrY_T0001958;gene_name=XKRYP6;ID=HG002_chrY_T0001958;Name=XKRYP6
HG002_chrY	CAT	exon	25135491	25135826	.	+	.	source_transcript=ENST00000440468.1;source_transcript_name=XKRYP6-201;source_gene=ENSG00000237546.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237546.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP6;alternative_source_transcripts=ENST00000442113.1;transcript_id=HG002_chrY_T0001958;gene_id=HG002_chrY_G0000697;Parent=HG002_chrY_T0001958;transcript_name=HG002_chrY_T0001958;gene_name=XKRYP6;ID=exon:HG002_chrY_T0001958:0;Name=XKRYP6;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25135827	25145595	.	+	.	source_transcript=ENST00000440468.1;source_transcript_name=XKRYP6-201;source_gene=ENSG00000237546.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237546.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP6;alternative_source_transcripts=ENST00000442113.1;transcript_id=HG002_chrY_T0001958;gene_id=HG002_chrY_G0000697;Parent=HG002_chrY_T0001958;transcript_name=HG002_chrY_T0001958;gene_name=XKRYP6;ID=intron:HG002_chrY_T0001958:0;Name=XKRYP6;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25145596	25146375	.	+	.	source_transcript=ENST00000440468.1;source_transcript_name=XKRYP6-201;source_gene=ENSG00000237546.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237546.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP6;alternative_source_transcripts=ENST00000442113.1;transcript_id=HG002_chrY_T0001958;gene_id=HG002_chrY_G0000697;Parent=HG002_chrY_T0001958;transcript_name=HG002_chrY_T0001958;gene_name=XKRYP6;ID=exon:HG002_chrY_T0001958:1;Name=XKRYP6;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25183463	25183794	.	-	.	source_gene_common_name=ELOCP11;source_gene=ENSG00000227867.1;alternative_source_transcripts=ENST00000444494.1;gene_id=HG002_chrY_G0000698;gene_biotype=processed_pseudogene;gene_name=ELOCP11;gene_sources=liftoff;ID=HG002_chrY_G0000698;Name=ELOCP11
HG002_chrY	CAT	transcript	25183463	25183794	1000	-	.	source_transcript=ENST00000436690.1;source_transcript_name=ELOCP11-201;source_gene=ENSG00000227867.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227867.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436690.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP11;alternative_source_transcripts=ENST00000444494.1;transcript_id=HG002_chrY_T0001959;gene_id=HG002_chrY_G0000698;Parent=HG002_chrY_G0000698;transcript_name=HG002_chrY_T0001959;gene_name=ELOCP11;ID=HG002_chrY_T0001959;Name=ELOCP11
HG002_chrY	CAT	exon	25183463	25183794	.	-	.	source_transcript=ENST00000436690.1;source_transcript_name=ELOCP11-201;source_gene=ENSG00000227867.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227867.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP11;alternative_source_transcripts=ENST00000444494.1;transcript_id=HG002_chrY_T0001959;gene_id=HG002_chrY_G0000698;Parent=HG002_chrY_T0001959;transcript_name=HG002_chrY_T0001959;gene_name=ELOCP11;ID=exon:HG002_chrY_T0001959:0;Name=ELOCP11;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25186906	25187919	.	-	.	source_gene_common_name=CDY23P;source_gene=ENSG00000231716.1;alternative_source_transcripts=ENST00000431260.1;gene_id=HG002_chrY_G0000699;gene_biotype=unprocessed_pseudogene;gene_name=CDY23P;gene_sources=liftoff;ID=HG002_chrY_G0000699;Name=CDY23P
HG002_chrY	CAT	transcript	25186906	25187919	1000	-	.	source_transcript=ENST00000451661.1;source_transcript_name=CDY23P-201;source_gene=ENSG00000231716.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231716.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000451661.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451661.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY23P;alternative_source_transcripts=ENST00000431260.1;transcript_id=HG002_chrY_T0001960;gene_id=HG002_chrY_G0000699;Parent=HG002_chrY_G0000699;transcript_name=HG002_chrY_T0001960;gene_name=CDY23P;ID=HG002_chrY_T0001960;Name=CDY23P
HG002_chrY	CAT	exon	25186906	25187919	.	-	.	source_transcript=ENST00000451661.1;source_transcript_name=CDY23P-201;source_gene=ENSG00000231716.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231716.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000451661.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451661.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY23P;alternative_source_transcripts=ENST00000431260.1;transcript_id=HG002_chrY_T0001960;gene_id=HG002_chrY_G0000699;Parent=HG002_chrY_T0001960;transcript_name=HG002_chrY_T0001960;gene_name=CDY23P;ID=exon:HG002_chrY_T0001960:0;Name=CDY23P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25194478	25201080	.	+	.	source_gene_common_name=USP9YP26;source_gene=ENSG00000234744.1;gene_id=HG002_chrY_G0000700;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP26;gene_sources=liftoff;ID=HG002_chrY_G0000700;Name=USP9YP26
HG002_chrY	CAT	transcript	25194478	25201080	1000	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;transcript_id=HG002_chrY_T0001961;gene_id=HG002_chrY_G0000700;Parent=HG002_chrY_G0000700;transcript_name=HG002_chrY_T0001961;gene_name=USP9YP26;ID=HG002_chrY_T0001961;Name=USP9YP26
HG002_chrY	CAT	exon	25194478	25194700	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;transcript_id=HG002_chrY_T0001961;gene_id=HG002_chrY_G0000700;Parent=HG002_chrY_T0001961;transcript_name=HG002_chrY_T0001961;gene_name=USP9YP26;ID=exon:HG002_chrY_T0001961:0;Name=USP9YP26;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25194701	25196498	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;transcript_id=HG002_chrY_T0001961;gene_id=HG002_chrY_G0000700;Parent=HG002_chrY_T0001961;transcript_name=HG002_chrY_T0001961;gene_name=USP9YP26;ID=intron:HG002_chrY_T0001961:0;Name=USP9YP26;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25196499	25196617	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;transcript_id=HG002_chrY_T0001961;gene_id=HG002_chrY_G0000700;Parent=HG002_chrY_T0001961;transcript_name=HG002_chrY_T0001961;gene_name=USP9YP26;ID=exon:HG002_chrY_T0001961:1;Name=USP9YP26;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25196618	25198403	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;transcript_id=HG002_chrY_T0001961;gene_id=HG002_chrY_G0000700;Parent=HG002_chrY_T0001961;transcript_name=HG002_chrY_T0001961;gene_name=USP9YP26;ID=intron:HG002_chrY_T0001961:1;Name=USP9YP26;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25198404	25198593	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;transcript_id=HG002_chrY_T0001961;gene_id=HG002_chrY_G0000700;Parent=HG002_chrY_T0001961;transcript_name=HG002_chrY_T0001961;gene_name=USP9YP26;ID=exon:HG002_chrY_T0001961:2;Name=USP9YP26;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25198594	25200951	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;transcript_id=HG002_chrY_T0001961;gene_id=HG002_chrY_G0000700;Parent=HG002_chrY_T0001961;transcript_name=HG002_chrY_T0001961;gene_name=USP9YP26;ID=intron:HG002_chrY_T0001961:2;Name=USP9YP26;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25200952	25201080	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;transcript_id=HG002_chrY_T0001961;gene_id=HG002_chrY_G0000700;Parent=HG002_chrY_T0001961;transcript_name=HG002_chrY_T0001961;gene_name=USP9YP26;ID=exon:HG002_chrY_T0001961:3;Name=USP9YP26;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25203659	25204461	.	+	.	source_gene_common_name=HSFY8P;source_gene=ENSG00000233156.1;gene_id=HG002_chrY_G0000701;gene_biotype=unprocessed_pseudogene;gene_name=HSFY8P;gene_sources=liftoff;ID=HG002_chrY_G0000701;Name=HSFY8P
HG002_chrY	CAT	transcript	25203659	25204461	1000	+	.	source_transcript=ENST00000437934.1;source_transcript_name=HSFY8P-201;source_gene=ENSG00000233156.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233156.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437934.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437934.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY8P;transcript_id=HG002_chrY_T0001962;gene_id=HG002_chrY_G0000701;Parent=HG002_chrY_G0000701;transcript_name=HG002_chrY_T0001962;gene_name=HSFY8P;ID=HG002_chrY_T0001962;Name=HSFY8P
HG002_chrY	CAT	exon	25203659	25203817	.	+	.	source_transcript=ENST00000437934.1;source_transcript_name=HSFY8P-201;source_gene=ENSG00000233156.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233156.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437934.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437934.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY8P;transcript_id=HG002_chrY_T0001962;gene_id=HG002_chrY_G0000701;Parent=HG002_chrY_T0001962;transcript_name=HG002_chrY_T0001962;gene_name=HSFY8P;ID=exon:HG002_chrY_T0001962:0;Name=HSFY8P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25203818	25204302	.	+	.	source_transcript=ENST00000437934.1;source_transcript_name=HSFY8P-201;source_gene=ENSG00000233156.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233156.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437934.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437934.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY8P;transcript_id=HG002_chrY_T0001962;gene_id=HG002_chrY_G0000701;Parent=HG002_chrY_T0001962;transcript_name=HG002_chrY_T0001962;gene_name=HSFY8P;ID=intron:HG002_chrY_T0001962:0;Name=HSFY8P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25204303	25204461	.	+	.	source_transcript=ENST00000437934.1;source_transcript_name=HSFY8P-201;source_gene=ENSG00000233156.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233156.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437934.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437934.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY8P;transcript_id=HG002_chrY_T0001962;gene_id=HG002_chrY_G0000701;Parent=HG002_chrY_T0001962;transcript_name=HG002_chrY_T0001962;gene_name=HSFY8P;ID=exon:HG002_chrY_T0001962:1;Name=HSFY8P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25221513	25224679	.	-	.	source_gene_common_name=ENSG00000295422;source_gene=ENSG00000295422.1;alternative_source_transcripts=ENST00000729927.1;gene_id=HG002_chrY_G0000702;gene_biotype=lncRNA;gene_name=ENSG00000295422;gene_sources=liftoff;ID=HG002_chrY_G0000702;Name=ENSG00000295422
HG002_chrY	CAT	transcript	25221513	25224679	1000	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;alternative_source_transcripts=ENST00000729927.1;transcript_id=HG002_chrY_T0001963;gene_id=HG002_chrY_G0000702;Parent=HG002_chrY_G0000702;transcript_name=HG002_chrY_T0001963;gene_name=ENSG00000295422;ID=HG002_chrY_T0001963;Name=ENSG00000295422
HG002_chrY	CAT	exon	25221513	25222855	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;alternative_source_transcripts=ENST00000729927.1;transcript_id=HG002_chrY_T0001963;gene_id=HG002_chrY_G0000702;Parent=HG002_chrY_T0001963;transcript_name=HG002_chrY_T0001963;gene_name=ENSG00000295422;ID=exon:HG002_chrY_T0001963:0;Name=ENSG00000295422;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25222856	25224390	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;alternative_source_transcripts=ENST00000729927.1;transcript_id=HG002_chrY_T0001963;gene_id=HG002_chrY_G0000702;Parent=HG002_chrY_T0001963;transcript_name=HG002_chrY_T0001963;gene_name=ENSG00000295422;ID=intron:HG002_chrY_T0001963:0;Name=ENSG00000295422;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25224391	25224451	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;alternative_source_transcripts=ENST00000729927.1;transcript_id=HG002_chrY_T0001963;gene_id=HG002_chrY_G0000702;Parent=HG002_chrY_T0001963;transcript_name=HG002_chrY_T0001963;gene_name=ENSG00000295422;ID=exon:HG002_chrY_T0001963:1;Name=ENSG00000295422;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25224452	25224568	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;alternative_source_transcripts=ENST00000729927.1;transcript_id=HG002_chrY_T0001963;gene_id=HG002_chrY_G0000702;Parent=HG002_chrY_T0001963;transcript_name=HG002_chrY_T0001963;gene_name=ENSG00000295422;ID=intron:HG002_chrY_T0001963:1;Name=ENSG00000295422;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25224569	25224679	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;alternative_source_transcripts=ENST00000729927.1;transcript_id=HG002_chrY_T0001963;gene_id=HG002_chrY_G0000702;Parent=HG002_chrY_T0001963;transcript_name=HG002_chrY_T0001963;gene_name=ENSG00000295422;ID=exon:HG002_chrY_T0001963:2;Name=ENSG00000295422;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25248004	25280714	.	-	.	source_gene_common_name=OFD1P15Y;source_gene=ENSG00000234888.1;gene_id=HG002_chrY_G0000703;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=OFD1P15Y;gene_sources=liftoff;ID=HG002_chrY_G0000703;Name=OFD1P15Y
HG002_chrY	CAT	transcript	25248004	25280714	1000	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG002_chrY_T0001964;gene_id=HG002_chrY_G0000703;Parent=HG002_chrY_G0000703;transcript_name=HG002_chrY_T0001964;gene_name=OFD1P15Y;ID=HG002_chrY_T0001964;Name=OFD1P15Y
HG002_chrY	CAT	exon	25248004	25248074	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG002_chrY_T0001964;gene_id=HG002_chrY_G0000703;Parent=HG002_chrY_T0001964;transcript_name=HG002_chrY_T0001964;gene_name=OFD1P15Y;ID=exon:HG002_chrY_T0001964:0;Name=OFD1P15Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25248075	25249255	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG002_chrY_T0001964;gene_id=HG002_chrY_G0000703;Parent=HG002_chrY_T0001964;transcript_name=HG002_chrY_T0001964;gene_name=OFD1P15Y;ID=intron:HG002_chrY_T0001964:0;Name=OFD1P15Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25249256	25249419	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG002_chrY_T0001964;gene_id=HG002_chrY_G0000703;Parent=HG002_chrY_T0001964;transcript_name=HG002_chrY_T0001964;gene_name=OFD1P15Y;ID=exon:HG002_chrY_T0001964:1;Name=OFD1P15Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25249420	25256057	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG002_chrY_T0001964;gene_id=HG002_chrY_G0000703;Parent=HG002_chrY_T0001964;transcript_name=HG002_chrY_T0001964;gene_name=OFD1P15Y;ID=intron:HG002_chrY_T0001964:1;Name=OFD1P15Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25256058	25256154	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG002_chrY_T0001964;gene_id=HG002_chrY_G0000703;Parent=HG002_chrY_T0001964;transcript_name=HG002_chrY_T0001964;gene_name=OFD1P15Y;ID=exon:HG002_chrY_T0001964:2;Name=OFD1P15Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25256155	25275508	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG002_chrY_T0001964;gene_id=HG002_chrY_G0000703;Parent=HG002_chrY_T0001964;transcript_name=HG002_chrY_T0001964;gene_name=OFD1P15Y;ID=intron:HG002_chrY_T0001964:2;Name=OFD1P15Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25275509	25275605	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG002_chrY_T0001964;gene_id=HG002_chrY_G0000703;Parent=HG002_chrY_T0001964;transcript_name=HG002_chrY_T0001964;gene_name=OFD1P15Y;ID=exon:HG002_chrY_T0001964:3;Name=OFD1P15Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25275606	25275974	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG002_chrY_T0001964;gene_id=HG002_chrY_G0000703;Parent=HG002_chrY_T0001964;transcript_name=HG002_chrY_T0001964;gene_name=OFD1P15Y;ID=intron:HG002_chrY_T0001964:3;Name=OFD1P15Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25275975	25276594	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG002_chrY_T0001964;gene_id=HG002_chrY_G0000703;Parent=HG002_chrY_T0001964;transcript_name=HG002_chrY_T0001964;gene_name=OFD1P15Y;ID=exon:HG002_chrY_T0001964:4;Name=OFD1P15Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25276595	25278311	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG002_chrY_T0001964;gene_id=HG002_chrY_G0000703;Parent=HG002_chrY_T0001964;transcript_name=HG002_chrY_T0001964;gene_name=OFD1P15Y;ID=intron:HG002_chrY_T0001964:4;Name=OFD1P15Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25278312	25278424	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG002_chrY_T0001964;gene_id=HG002_chrY_G0000703;Parent=HG002_chrY_T0001964;transcript_name=HG002_chrY_T0001964;gene_name=OFD1P15Y;ID=exon:HG002_chrY_T0001964:5;Name=OFD1P15Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25278425	25278960	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG002_chrY_T0001964;gene_id=HG002_chrY_G0000703;Parent=HG002_chrY_T0001964;transcript_name=HG002_chrY_T0001964;gene_name=OFD1P15Y;ID=intron:HG002_chrY_T0001964:5;Name=OFD1P15Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25278961	25279085	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG002_chrY_T0001964;gene_id=HG002_chrY_G0000703;Parent=HG002_chrY_T0001964;transcript_name=HG002_chrY_T0001964;gene_name=OFD1P15Y;ID=exon:HG002_chrY_T0001964:6;Name=OFD1P15Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25279086	25280609	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG002_chrY_T0001964;gene_id=HG002_chrY_G0000703;Parent=HG002_chrY_T0001964;transcript_name=HG002_chrY_T0001964;gene_name=OFD1P15Y;ID=intron:HG002_chrY_T0001964:6;Name=OFD1P15Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25280610	25280714	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG002_chrY_T0001964;gene_id=HG002_chrY_G0000703;Parent=HG002_chrY_T0001964;transcript_name=HG002_chrY_T0001964;gene_name=OFD1P15Y;ID=exon:HG002_chrY_T0001964:7;Name=OFD1P15Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25302224	25307678	.	+	.	source_gene_common_name=ENSG00000299625;source_gene=ENSG00000299625.1;gene_id=HG002_chrY_G0000704;gene_biotype=lncRNA;gene_name=ENSG00000299625;gene_sources=liftoff;ID=HG002_chrY_G0000704;Name=ENSG00000299625
HG002_chrY	CAT	transcript	25302224	25307672	1000	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001965;gene_id=HG002_chrY_G0000704;Parent=HG002_chrY_G0000704;transcript_name=HG002_chrY_T0001965;gene_name=ENSG00000299625;ID=HG002_chrY_T0001965;Name=ENSG00000299625
HG002_chrY	CAT	exon	25302224	25302563	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001965;gene_id=HG002_chrY_G0000704;Parent=HG002_chrY_T0001965;transcript_name=HG002_chrY_T0001965;gene_name=ENSG00000299625;ID=exon:HG002_chrY_T0001965:0;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25302564	25306481	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001965;gene_id=HG002_chrY_G0000704;Parent=HG002_chrY_T0001965;transcript_name=HG002_chrY_T0001965;gene_name=ENSG00000299625;ID=intron:HG002_chrY_T0001965:0;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25306482	25306608	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001965;gene_id=HG002_chrY_G0000704;Parent=HG002_chrY_T0001965;transcript_name=HG002_chrY_T0001965;gene_name=ENSG00000299625;ID=exon:HG002_chrY_T0001965:1;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25306609	25306972	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001965;gene_id=HG002_chrY_G0000704;Parent=HG002_chrY_T0001965;transcript_name=HG002_chrY_T0001965;gene_name=ENSG00000299625;ID=intron:HG002_chrY_T0001965:1;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25306973	25307672	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG002_chrY_T0001965;gene_id=HG002_chrY_G0000704;Parent=HG002_chrY_T0001965;transcript_name=HG002_chrY_T0001965;gene_name=ENSG00000299625;ID=exon:HG002_chrY_T0001965:2;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	25302225	25307678	1000	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000812264.1;transcript_id=HG002_chrY_T0001966;gene_id=HG002_chrY_G0000704;Parent=HG002_chrY_G0000704;transcript_name=HG002_chrY_T0001966;gene_name=ENSG00000299625;ID=HG002_chrY_T0001966;Name=ENSG00000299625
HG002_chrY	CAT	exon	25302225	25302563	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000812264.1;transcript_id=HG002_chrY_T0001966;gene_id=HG002_chrY_G0000704;Parent=HG002_chrY_T0001966;transcript_name=HG002_chrY_T0001966;gene_name=ENSG00000299625;ID=exon:HG002_chrY_T0001966:0;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25302564	25304479	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000812264.1;transcript_id=HG002_chrY_T0001966;gene_id=HG002_chrY_G0000704;Parent=HG002_chrY_T0001966;transcript_name=HG002_chrY_T0001966;gene_name=ENSG00000299625;ID=intron:HG002_chrY_T0001966:0;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25304480	25304613	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000812264.1;transcript_id=HG002_chrY_T0001966;gene_id=HG002_chrY_G0000704;Parent=HG002_chrY_T0001966;transcript_name=HG002_chrY_T0001966;gene_name=ENSG00000299625;ID=exon:HG002_chrY_T0001966:1;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25304614	25306481	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000812264.1;transcript_id=HG002_chrY_T0001966;gene_id=HG002_chrY_G0000704;Parent=HG002_chrY_T0001966;transcript_name=HG002_chrY_T0001966;gene_name=ENSG00000299625;ID=intron:HG002_chrY_T0001966:1;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25306482	25306608	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000812264.1;transcript_id=HG002_chrY_T0001966;gene_id=HG002_chrY_G0000704;Parent=HG002_chrY_T0001966;transcript_name=HG002_chrY_T0001966;gene_name=ENSG00000299625;ID=exon:HG002_chrY_T0001966:2;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25306609	25306972	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000812264.1;transcript_id=HG002_chrY_T0001966;gene_id=HG002_chrY_G0000704;Parent=HG002_chrY_T0001966;transcript_name=HG002_chrY_T0001966;gene_name=ENSG00000299625;ID=intron:HG002_chrY_T0001966:2;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25306973	25307678	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000812264.1;transcript_id=HG002_chrY_T0001966;gene_id=HG002_chrY_G0000704;Parent=HG002_chrY_T0001966;transcript_name=HG002_chrY_T0001966;gene_name=ENSG00000299625;ID=exon:HG002_chrY_T0001966:3;Name=ENSG00000299625;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25311452	25313033	.	-	.	source_gene_common_name=ENSG00000237968;source_gene=ENSG00000237968.1;gene_id=HG002_chrY_G0000705;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000237968;gene_sources=liftoff;ID=HG002_chrY_G0000705;Name=ENSG00000237968
HG002_chrY	CAT	transcript	25311452	25313033	1000	-	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;transcript_id=HG002_chrY_T0001967;gene_id=HG002_chrY_G0000705;Parent=HG002_chrY_G0000705;transcript_name=HG002_chrY_T0001967;gene_name=ENSG00000237968;ID=HG002_chrY_T0001967;Name=ENSG00000237968
HG002_chrY	CAT	exon	25311452	25311527	.	-	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;transcript_id=HG002_chrY_T0001967;gene_id=HG002_chrY_G0000705;Parent=HG002_chrY_T0001967;transcript_name=HG002_chrY_T0001967;gene_name=ENSG00000237968;ID=exon:HG002_chrY_T0001967:0;Name=ENSG00000237968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25311528	25311644	.	-	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;transcript_id=HG002_chrY_T0001967;gene_id=HG002_chrY_G0000705;Parent=HG002_chrY_T0001967;transcript_name=HG002_chrY_T0001967;gene_name=ENSG00000237968;ID=intron:HG002_chrY_T0001967:0;Name=ENSG00000237968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25311645	25311788	.	-	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;transcript_id=HG002_chrY_T0001967;gene_id=HG002_chrY_G0000705;Parent=HG002_chrY_T0001967;transcript_name=HG002_chrY_T0001967;gene_name=ENSG00000237968;ID=exon:HG002_chrY_T0001967:1;Name=ENSG00000237968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25311789	25311875	.	-	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;transcript_id=HG002_chrY_T0001967;gene_id=HG002_chrY_G0000705;Parent=HG002_chrY_T0001967;transcript_name=HG002_chrY_T0001967;gene_name=ENSG00000237968;ID=intron:HG002_chrY_T0001967:1;Name=ENSG00000237968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25311876	25311985	.	-	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;transcript_id=HG002_chrY_T0001967;gene_id=HG002_chrY_G0000705;Parent=HG002_chrY_T0001967;transcript_name=HG002_chrY_T0001967;gene_name=ENSG00000237968;ID=exon:HG002_chrY_T0001967:2;Name=ENSG00000237968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25311986	25312183	.	-	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;transcript_id=HG002_chrY_T0001967;gene_id=HG002_chrY_G0000705;Parent=HG002_chrY_T0001967;transcript_name=HG002_chrY_T0001967;gene_name=ENSG00000237968;ID=intron:HG002_chrY_T0001967:2;Name=ENSG00000237968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25312184	25312222	.	-	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;transcript_id=HG002_chrY_T0001967;gene_id=HG002_chrY_G0000705;Parent=HG002_chrY_T0001967;transcript_name=HG002_chrY_T0001967;gene_name=ENSG00000237968;ID=exon:HG002_chrY_T0001967:3;Name=ENSG00000237968;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25312223	25312701	.	-	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;transcript_id=HG002_chrY_T0001967;gene_id=HG002_chrY_G0000705;Parent=HG002_chrY_T0001967;transcript_name=HG002_chrY_T0001967;gene_name=ENSG00000237968;ID=intron:HG002_chrY_T0001967:3;Name=ENSG00000237968;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25312702	25313033	.	-	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;transcript_id=HG002_chrY_T0001967;gene_id=HG002_chrY_G0000705;Parent=HG002_chrY_T0001967;transcript_name=HG002_chrY_T0001967;gene_name=ENSG00000237968;ID=exon:HG002_chrY_T0001967:4;Name=ENSG00000237968;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25313879	25328010	.	+	.	source_gene_common_name=ENSG00000293280;source_gene=ENSG00000293280.2;gene_id=HG002_chrY_G0000706;gene_biotype=lncRNA;gene_name=ENSG00000293280;gene_sources=liftoff;ID=HG002_chrY_G0000706;Name=ENSG00000293280
HG002_chrY	CAT	transcript	25313879	25322372	1000	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG002_chrY_T0001968;gene_id=HG002_chrY_G0000706;Parent=HG002_chrY_G0000706;transcript_name=HG002_chrY_T0001968;gene_name=ENSG00000293280;ID=HG002_chrY_T0001968;Name=ENSG00000293280
HG002_chrY	CAT	exon	25313879	25314042	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG002_chrY_T0001968;gene_id=HG002_chrY_G0000706;Parent=HG002_chrY_T0001968;transcript_name=HG002_chrY_T0001968;gene_name=ENSG00000293280;ID=exon:HG002_chrY_T0001968:0;Name=ENSG00000293280;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25314043	25314796	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG002_chrY_T0001968;gene_id=HG002_chrY_G0000706;Parent=HG002_chrY_T0001968;transcript_name=HG002_chrY_T0001968;gene_name=ENSG00000293280;ID=intron:HG002_chrY_T0001968:0;Name=ENSG00000293280;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25314797	25314876	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG002_chrY_T0001968;gene_id=HG002_chrY_G0000706;Parent=HG002_chrY_T0001968;transcript_name=HG002_chrY_T0001968;gene_name=ENSG00000293280;ID=exon:HG002_chrY_T0001968:1;Name=ENSG00000293280;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25314877	25315890	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG002_chrY_T0001968;gene_id=HG002_chrY_G0000706;Parent=HG002_chrY_T0001968;transcript_name=HG002_chrY_T0001968;gene_name=ENSG00000293280;ID=intron:HG002_chrY_T0001968:1;Name=ENSG00000293280;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25315891	25316003	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG002_chrY_T0001968;gene_id=HG002_chrY_G0000706;Parent=HG002_chrY_T0001968;transcript_name=HG002_chrY_T0001968;gene_name=ENSG00000293280;ID=exon:HG002_chrY_T0001968:2;Name=ENSG00000293280;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25316004	25316456	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG002_chrY_T0001968;gene_id=HG002_chrY_G0000706;Parent=HG002_chrY_T0001968;transcript_name=HG002_chrY_T0001968;gene_name=ENSG00000293280;ID=intron:HG002_chrY_T0001968:2;Name=ENSG00000293280;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25316457	25316560	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG002_chrY_T0001968;gene_id=HG002_chrY_G0000706;Parent=HG002_chrY_T0001968;transcript_name=HG002_chrY_T0001968;gene_name=ENSG00000293280;ID=exon:HG002_chrY_T0001968:3;Name=ENSG00000293280;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25316561	25319268	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG002_chrY_T0001968;gene_id=HG002_chrY_G0000706;Parent=HG002_chrY_T0001968;transcript_name=HG002_chrY_T0001968;gene_name=ENSG00000293280;ID=intron:HG002_chrY_T0001968:3;Name=ENSG00000293280;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25319269	25319446	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG002_chrY_T0001968;gene_id=HG002_chrY_G0000706;Parent=HG002_chrY_T0001968;transcript_name=HG002_chrY_T0001968;gene_name=ENSG00000293280;ID=exon:HG002_chrY_T0001968:4;Name=ENSG00000293280;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25319447	25321381	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG002_chrY_T0001968;gene_id=HG002_chrY_G0000706;Parent=HG002_chrY_T0001968;transcript_name=HG002_chrY_T0001968;gene_name=ENSG00000293280;ID=intron:HG002_chrY_T0001968:4;Name=ENSG00000293280;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25321382	25321534	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG002_chrY_T0001968;gene_id=HG002_chrY_G0000706;Parent=HG002_chrY_T0001968;transcript_name=HG002_chrY_T0001968;gene_name=ENSG00000293280;ID=exon:HG002_chrY_T0001968:5;Name=ENSG00000293280;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25321535	25322112	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG002_chrY_T0001968;gene_id=HG002_chrY_G0000706;Parent=HG002_chrY_T0001968;transcript_name=HG002_chrY_T0001968;gene_name=ENSG00000293280;ID=intron:HG002_chrY_T0001968:5;Name=ENSG00000293280;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25322113	25322372	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG002_chrY_T0001968;gene_id=HG002_chrY_G0000706;Parent=HG002_chrY_T0001968;transcript_name=HG002_chrY_T0001968;gene_name=ENSG00000293280;ID=exon:HG002_chrY_T0001968:6;Name=ENSG00000293280;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	25313889	25328010	1000	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG002_chrY_T0001969;gene_id=HG002_chrY_G0000706;Parent=HG002_chrY_G0000706;transcript_name=HG002_chrY_T0001969;gene_name=ENSG00000293280;ID=HG002_chrY_T0001969;Name=ENSG00000293280
HG002_chrY	CAT	exon	25313889	25314042	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG002_chrY_T0001969;gene_id=HG002_chrY_G0000706;Parent=HG002_chrY_T0001969;transcript_name=HG002_chrY_T0001969;gene_name=ENSG00000293280;ID=exon:HG002_chrY_T0001969:0;Name=ENSG00000293280;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25314043	25314796	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG002_chrY_T0001969;gene_id=HG002_chrY_G0000706;Parent=HG002_chrY_T0001969;transcript_name=HG002_chrY_T0001969;gene_name=ENSG00000293280;ID=intron:HG002_chrY_T0001969:0;Name=ENSG00000293280;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25314797	25314876	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG002_chrY_T0001969;gene_id=HG002_chrY_G0000706;Parent=HG002_chrY_T0001969;transcript_name=HG002_chrY_T0001969;gene_name=ENSG00000293280;ID=exon:HG002_chrY_T0001969:1;Name=ENSG00000293280;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25314877	25315890	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG002_chrY_T0001969;gene_id=HG002_chrY_G0000706;Parent=HG002_chrY_T0001969;transcript_name=HG002_chrY_T0001969;gene_name=ENSG00000293280;ID=intron:HG002_chrY_T0001969:1;Name=ENSG00000293280;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25315891	25316003	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG002_chrY_T0001969;gene_id=HG002_chrY_G0000706;Parent=HG002_chrY_T0001969;transcript_name=HG002_chrY_T0001969;gene_name=ENSG00000293280;ID=exon:HG002_chrY_T0001969:2;Name=ENSG00000293280;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25316004	25316456	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG002_chrY_T0001969;gene_id=HG002_chrY_G0000706;Parent=HG002_chrY_T0001969;transcript_name=HG002_chrY_T0001969;gene_name=ENSG00000293280;ID=intron:HG002_chrY_T0001969:2;Name=ENSG00000293280;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25316457	25316560	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG002_chrY_T0001969;gene_id=HG002_chrY_G0000706;Parent=HG002_chrY_T0001969;transcript_name=HG002_chrY_T0001969;gene_name=ENSG00000293280;ID=exon:HG002_chrY_T0001969:3;Name=ENSG00000293280;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25316561	25319268	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG002_chrY_T0001969;gene_id=HG002_chrY_G0000706;Parent=HG002_chrY_T0001969;transcript_name=HG002_chrY_T0001969;gene_name=ENSG00000293280;ID=intron:HG002_chrY_T0001969:3;Name=ENSG00000293280;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25319269	25319446	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG002_chrY_T0001969;gene_id=HG002_chrY_G0000706;Parent=HG002_chrY_T0001969;transcript_name=HG002_chrY_T0001969;gene_name=ENSG00000293280;ID=exon:HG002_chrY_T0001969:4;Name=ENSG00000293280;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25319447	25321381	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG002_chrY_T0001969;gene_id=HG002_chrY_G0000706;Parent=HG002_chrY_T0001969;transcript_name=HG002_chrY_T0001969;gene_name=ENSG00000293280;ID=intron:HG002_chrY_T0001969:4;Name=ENSG00000293280;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25321382	25321534	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG002_chrY_T0001969;gene_id=HG002_chrY_G0000706;Parent=HG002_chrY_T0001969;transcript_name=HG002_chrY_T0001969;gene_name=ENSG00000293280;ID=exon:HG002_chrY_T0001969:5;Name=ENSG00000293280;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25321535	25323541	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG002_chrY_T0001969;gene_id=HG002_chrY_G0000706;Parent=HG002_chrY_T0001969;transcript_name=HG002_chrY_T0001969;gene_name=ENSG00000293280;ID=intron:HG002_chrY_T0001969:5;Name=ENSG00000293280;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25323542	25323656	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG002_chrY_T0001969;gene_id=HG002_chrY_G0000706;Parent=HG002_chrY_T0001969;transcript_name=HG002_chrY_T0001969;gene_name=ENSG00000293280;ID=exon:HG002_chrY_T0001969:6;Name=ENSG00000293280;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25323657	25327588	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG002_chrY_T0001969;gene_id=HG002_chrY_G0000706;Parent=HG002_chrY_T0001969;transcript_name=HG002_chrY_T0001969;gene_name=ENSG00000293280;ID=intron:HG002_chrY_T0001969:6;Name=ENSG00000293280;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25327589	25328010	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG002_chrY_T0001969;gene_id=HG002_chrY_G0000706;Parent=HG002_chrY_T0001969;transcript_name=HG002_chrY_T0001969;gene_name=ENSG00000293280;ID=exon:HG002_chrY_T0001969:7;Name=ENSG00000293280;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25315895	25325529	.	+	.	source_gene_common_name=RBMY2DP;source_gene=ENSG00000215507.11;gene_id=HG002_chrY_G0000707;gene_biotype=transcribed_processed_pseudogene;gene_name=RBMY2DP;gene_sources=liftoff;ID=HG002_chrY_G0000707;Name=RBMY2DP
HG002_chrY	CAT	transcript	25315895	25325529	1000	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG002_chrY_T0001970;gene_id=HG002_chrY_G0000707;Parent=HG002_chrY_G0000707;transcript_name=HG002_chrY_T0001970;gene_name=RBMY2DP;ID=HG002_chrY_T0001970;Name=RBMY2DP
HG002_chrY	CAT	exon	25315895	25316003	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG002_chrY_T0001970;gene_id=HG002_chrY_G0000707;Parent=HG002_chrY_T0001970;transcript_name=HG002_chrY_T0001970;gene_name=RBMY2DP;ID=exon:HG002_chrY_T0001970:0;Name=RBMY2DP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25316004	25316456	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG002_chrY_T0001970;gene_id=HG002_chrY_G0000707;Parent=HG002_chrY_T0001970;transcript_name=HG002_chrY_T0001970;gene_name=RBMY2DP;ID=intron:HG002_chrY_T0001970:0;Name=RBMY2DP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25316457	25316560	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG002_chrY_T0001970;gene_id=HG002_chrY_G0000707;Parent=HG002_chrY_T0001970;transcript_name=HG002_chrY_T0001970;gene_name=RBMY2DP;ID=exon:HG002_chrY_T0001970:1;Name=RBMY2DP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25316561	25319268	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG002_chrY_T0001970;gene_id=HG002_chrY_G0000707;Parent=HG002_chrY_T0001970;transcript_name=HG002_chrY_T0001970;gene_name=RBMY2DP;ID=intron:HG002_chrY_T0001970:1;Name=RBMY2DP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25319269	25319446	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG002_chrY_T0001970;gene_id=HG002_chrY_G0000707;Parent=HG002_chrY_T0001970;transcript_name=HG002_chrY_T0001970;gene_name=RBMY2DP;ID=exon:HG002_chrY_T0001970:2;Name=RBMY2DP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25319447	25321381	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG002_chrY_T0001970;gene_id=HG002_chrY_G0000707;Parent=HG002_chrY_T0001970;transcript_name=HG002_chrY_T0001970;gene_name=RBMY2DP;ID=intron:HG002_chrY_T0001970:2;Name=RBMY2DP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25321382	25321534	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG002_chrY_T0001970;gene_id=HG002_chrY_G0000707;Parent=HG002_chrY_T0001970;transcript_name=HG002_chrY_T0001970;gene_name=RBMY2DP;ID=exon:HG002_chrY_T0001970:3;Name=RBMY2DP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25321535	25323541	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG002_chrY_T0001970;gene_id=HG002_chrY_G0000707;Parent=HG002_chrY_T0001970;transcript_name=HG002_chrY_T0001970;gene_name=RBMY2DP;ID=intron:HG002_chrY_T0001970:3;Name=RBMY2DP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25323542	25323656	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG002_chrY_T0001970;gene_id=HG002_chrY_G0000707;Parent=HG002_chrY_T0001970;transcript_name=HG002_chrY_T0001970;gene_name=RBMY2DP;ID=exon:HG002_chrY_T0001970:4;Name=RBMY2DP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25323657	25324525	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG002_chrY_T0001970;gene_id=HG002_chrY_G0000707;Parent=HG002_chrY_T0001970;transcript_name=HG002_chrY_T0001970;gene_name=RBMY2DP;ID=intron:HG002_chrY_T0001970:4;Name=RBMY2DP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25324526	25324636	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG002_chrY_T0001970;gene_id=HG002_chrY_G0000707;Parent=HG002_chrY_T0001970;transcript_name=HG002_chrY_T0001970;gene_name=RBMY2DP;ID=exon:HG002_chrY_T0001970:5;Name=RBMY2DP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25324637	25324718	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG002_chrY_T0001970;gene_id=HG002_chrY_G0000707;Parent=HG002_chrY_T0001970;transcript_name=HG002_chrY_T0001970;gene_name=RBMY2DP;ID=intron:HG002_chrY_T0001970:5;Name=RBMY2DP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25324719	25324806	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG002_chrY_T0001970;gene_id=HG002_chrY_G0000707;Parent=HG002_chrY_T0001970;transcript_name=HG002_chrY_T0001970;gene_name=RBMY2DP;ID=exon:HG002_chrY_T0001970:6;Name=RBMY2DP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25324807	25325230	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG002_chrY_T0001970;gene_id=HG002_chrY_G0000707;Parent=HG002_chrY_T0001970;transcript_name=HG002_chrY_T0001970;gene_name=RBMY2DP;ID=intron:HG002_chrY_T0001970:6;Name=RBMY2DP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25325231	25325529	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG002_chrY_T0001970;gene_id=HG002_chrY_G0000707;Parent=HG002_chrY_T0001970;transcript_name=HG002_chrY_T0001970;gene_name=RBMY2DP;ID=exon:HG002_chrY_T0001970:7;Name=RBMY2DP;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25337272	25339515	.	-	.	source_gene_common_name=ENSG00000224917;source_gene=ENSG00000224917.1;gene_id=HG002_chrY_G0000708;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000224917;gene_sources=liftoff;ID=HG002_chrY_G0000708;Name=ENSG00000224917
HG002_chrY	CAT	transcript	25337272	25339515	1000	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;transcript_id=HG002_chrY_T0001971;gene_id=HG002_chrY_G0000708;Parent=HG002_chrY_G0000708;transcript_name=HG002_chrY_T0001971;gene_name=ENSG00000224917;ID=HG002_chrY_T0001971;Name=ENSG00000224917
HG002_chrY	CAT	exon	25337272	25337345	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;transcript_id=HG002_chrY_T0001971;gene_id=HG002_chrY_G0000708;Parent=HG002_chrY_T0001971;transcript_name=HG002_chrY_T0001971;gene_name=ENSG00000224917;ID=exon:HG002_chrY_T0001971:0;Name=ENSG00000224917;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25337346	25337466	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;transcript_id=HG002_chrY_T0001971;gene_id=HG002_chrY_G0000708;Parent=HG002_chrY_T0001971;transcript_name=HG002_chrY_T0001971;gene_name=ENSG00000224917;ID=intron:HG002_chrY_T0001971:0;Name=ENSG00000224917;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25337467	25337526	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;transcript_id=HG002_chrY_T0001971;gene_id=HG002_chrY_G0000708;Parent=HG002_chrY_T0001971;transcript_name=HG002_chrY_T0001971;gene_name=ENSG00000224917;ID=exon:HG002_chrY_T0001971:1;Name=ENSG00000224917;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25337527	25337702	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;transcript_id=HG002_chrY_T0001971;gene_id=HG002_chrY_G0000708;Parent=HG002_chrY_T0001971;transcript_name=HG002_chrY_T0001971;gene_name=ENSG00000224917;ID=intron:HG002_chrY_T0001971:1;Name=ENSG00000224917;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25337703	25337811	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;transcript_id=HG002_chrY_T0001971;gene_id=HG002_chrY_G0000708;Parent=HG002_chrY_T0001971;transcript_name=HG002_chrY_T0001971;gene_name=ENSG00000224917;ID=exon:HG002_chrY_T0001971:2;Name=ENSG00000224917;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25337812	25338026	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;transcript_id=HG002_chrY_T0001971;gene_id=HG002_chrY_G0000708;Parent=HG002_chrY_T0001971;transcript_name=HG002_chrY_T0001971;gene_name=ENSG00000224917;ID=intron:HG002_chrY_T0001971:2;Name=ENSG00000224917;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25338027	25338081	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;transcript_id=HG002_chrY_T0001971;gene_id=HG002_chrY_G0000708;Parent=HG002_chrY_T0001971;transcript_name=HG002_chrY_T0001971;gene_name=ENSG00000224917;ID=exon:HG002_chrY_T0001971:3;Name=ENSG00000224917;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25338082	25339113	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;transcript_id=HG002_chrY_T0001971;gene_id=HG002_chrY_G0000708;Parent=HG002_chrY_T0001971;transcript_name=HG002_chrY_T0001971;gene_name=ENSG00000224917;ID=intron:HG002_chrY_T0001971:3;Name=ENSG00000224917;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25339114	25339515	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;transcript_id=HG002_chrY_T0001971;gene_id=HG002_chrY_G0000708;Parent=HG002_chrY_T0001971;transcript_name=HG002_chrY_T0001971;gene_name=ENSG00000224917;ID=exon:HG002_chrY_T0001971:4;Name=ENSG00000224917;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25390546	25400362	.	-	.	source_gene_common_name=REREP2Y;source_gene=ENSG00000235014.1;gene_id=HG002_chrY_G0000709;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=REREP2Y;gene_sources=liftoff;ID=HG002_chrY_G0000709;Name=REREP2Y
HG002_chrY	CAT	transcript	25390546	25400362	1000	-	.	source_transcript=ENST00000439103.1;source_transcript_name=REREP2Y-201;source_gene=ENSG00000235014.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235014.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000439103.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439103.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;transcript_id=HG002_chrY_T0001972;gene_id=HG002_chrY_G0000709;Parent=HG002_chrY_G0000709;transcript_name=HG002_chrY_T0001972;gene_name=REREP2Y;ID=HG002_chrY_T0001972;Name=REREP2Y
HG002_chrY	CAT	exon	25390546	25390672	.	-	.	source_transcript=ENST00000439103.1;source_transcript_name=REREP2Y-201;source_gene=ENSG00000235014.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235014.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000439103.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;transcript_id=HG002_chrY_T0001972;gene_id=HG002_chrY_G0000709;Parent=HG002_chrY_T0001972;transcript_name=HG002_chrY_T0001972;gene_name=REREP2Y;ID=exon:HG002_chrY_T0001972:0;Name=REREP2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25390673	25400289	.	-	.	source_transcript=ENST00000439103.1;source_transcript_name=REREP2Y-201;source_gene=ENSG00000235014.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235014.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000439103.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;transcript_id=HG002_chrY_T0001972;gene_id=HG002_chrY_G0000709;Parent=HG002_chrY_T0001972;transcript_name=HG002_chrY_T0001972;gene_name=REREP2Y;ID=intron:HG002_chrY_T0001972:0;Name=REREP2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25400290	25400362	.	-	.	source_transcript=ENST00000439103.1;source_transcript_name=REREP2Y-201;source_gene=ENSG00000235014.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235014.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000439103.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;transcript_id=HG002_chrY_T0001972;gene_id=HG002_chrY_G0000709;Parent=HG002_chrY_T0001972;transcript_name=HG002_chrY_T0001972;gene_name=REREP2Y;ID=exon:HG002_chrY_T0001972:1;Name=REREP2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25426820	25426921	.	-	.	source_gene_common_name=ENSG00000286744;source_gene=ENSG00000286744.1;alternative_source_transcripts=ENST00000662956.1;gene_id=HG002_chrY_G0000710;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000286744;gene_sources=liftoff;ID=HG002_chrY_G0000710;Name=ENSG00000286744
HG002_chrY	CAT	transcript	25426820	25426921	1000	-	.	source_transcript=ENST00000662956.1;source_transcript_name=ENST00000662956;source_gene=ENSG00000286744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000286744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000662956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662956.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286744;alternative_source_transcripts=ENST00000662956.1;transcript_id=HG002_chrY_T0001973;gene_id=HG002_chrY_G0000710;Parent=HG002_chrY_G0000710;transcript_name=HG002_chrY_T0001973;gene_name=ENSG00000286744;ID=HG002_chrY_T0001973;Name=ENSG00000286744
HG002_chrY	CAT	exon	25426820	25426921	.	-	.	source_transcript=ENST00000662956.1;source_transcript_name=ENST00000662956;source_gene=ENSG00000286744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000286744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000662956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286744;alternative_source_transcripts=ENST00000662956.1;transcript_id=HG002_chrY_T0001973;gene_id=HG002_chrY_G0000710;Parent=HG002_chrY_T0001973;transcript_name=HG002_chrY_T0001973;gene_name=ENSG00000286744;ID=exon:HG002_chrY_T0001973:0;Name=ENSG00000286744;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25436555	25436777	.	-	.	source_gene_common_name=ENSG00000225876;source_gene=ENSG00000225876.1;gene_id=HG002_chrY_G0000711;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000225876;gene_sources=liftoff;ID=HG002_chrY_G0000711;Name=ENSG00000225876
HG002_chrY	CAT	transcript	25436555	25436777	1000	-	.	source_transcript=ENST00000426199.1;source_transcript_name=ENST00000426199;source_gene=ENSG00000225876.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225876.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426199.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000225876;transcript_id=HG002_chrY_T0001974;gene_id=HG002_chrY_G0000711;Parent=HG002_chrY_G0000711;transcript_name=HG002_chrY_T0001974;gene_name=ENSG00000225876;ID=HG002_chrY_T0001974;Name=ENSG00000225876
HG002_chrY	CAT	exon	25436555	25436777	.	-	.	source_transcript=ENST00000426199.1;source_transcript_name=ENST00000426199;source_gene=ENSG00000225876.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225876.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000225876;transcript_id=HG002_chrY_T0001974;gene_id=HG002_chrY_G0000711;Parent=HG002_chrY_T0001974;transcript_name=HG002_chrY_T0001974;gene_name=ENSG00000225876;ID=exon:HG002_chrY_T0001974:0;Name=ENSG00000225876;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25439588	25439725	.	+	.	source_gene_common_name=SNORA70;source_gene=ENSG00000251925.1;alternative_source_transcripts=ENST00000516116.1;gene_id=HG002_chrY_G0000712;gene_biotype=snoRNA;gene_name=SNORA70;gene_sources=liftoff;ID=HG002_chrY_G0000712;Name=SNORA70
HG002_chrY	CAT	transcript	25439588	25439725	1000	+	.	source_transcript=ENST00000516116.1;source_transcript_name=SNORA70.13-201;source_gene=ENSG00000251925.1;source_gene_biotype=snoRNA;original_gene_id=ENSG00000251925.1;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=ENST00000516116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516116.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNORA70;alternative_source_transcripts=ENST00000516116.1;transcript_id=HG002_chrY_T0001975;gene_id=HG002_chrY_G0000712;Parent=HG002_chrY_G0000712;transcript_name=HG002_chrY_T0001975;gene_name=SNORA70;ID=HG002_chrY_T0001975;Name=SNORA70
HG002_chrY	CAT	exon	25439588	25439725	.	+	.	source_transcript=ENST00000516116.1;source_transcript_name=SNORA70.13-201;source_gene=ENSG00000251925.1;source_gene_biotype=snoRNA;original_gene_id=ENSG00000251925.1;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=ENST00000516116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516116.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNORA70;alternative_source_transcripts=ENST00000516116.1;transcript_id=HG002_chrY_T0001975;gene_id=HG002_chrY_G0000712;Parent=HG002_chrY_T0001975;transcript_name=HG002_chrY_T0001975;gene_name=SNORA70;ID=exon:HG002_chrY_T0001975:0;Name=SNORA70;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25470126	25483339	.	-	.	source_gene_common_name=PPP1R12BP2;source_gene=ENSG00000205936.3;gene_id=HG002_chrY_G0000713;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=PPP1R12BP2;gene_sources=liftoff;ID=HG002_chrY_G0000713;Name=PPP1R12BP2
HG002_chrY	CAT	transcript	25470126	25483339	1000	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG002_chrY_T0001976;gene_id=HG002_chrY_G0000713;Parent=HG002_chrY_G0000713;transcript_name=HG002_chrY_T0001976;gene_name=PPP1R12BP2;ID=HG002_chrY_T0001976;Name=PPP1R12BP2
HG002_chrY	CAT	exon	25470126	25470167	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG002_chrY_T0001976;gene_id=HG002_chrY_G0000713;Parent=HG002_chrY_T0001976;transcript_name=HG002_chrY_T0001976;gene_name=PPP1R12BP2;ID=exon:HG002_chrY_T0001976:0;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25470168	25471267	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG002_chrY_T0001976;gene_id=HG002_chrY_G0000713;Parent=HG002_chrY_T0001976;transcript_name=HG002_chrY_T0001976;gene_name=PPP1R12BP2;ID=intron:HG002_chrY_T0001976:0;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25471268	25471380	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG002_chrY_T0001976;gene_id=HG002_chrY_G0000713;Parent=HG002_chrY_T0001976;transcript_name=HG002_chrY_T0001976;gene_name=PPP1R12BP2;ID=exon:HG002_chrY_T0001976:1;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25471381	25471468	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG002_chrY_T0001976;gene_id=HG002_chrY_G0000713;Parent=HG002_chrY_T0001976;transcript_name=HG002_chrY_T0001976;gene_name=PPP1R12BP2;ID=intron:HG002_chrY_T0001976:1;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25471469	25471658	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG002_chrY_T0001976;gene_id=HG002_chrY_G0000713;Parent=HG002_chrY_T0001976;transcript_name=HG002_chrY_T0001976;gene_name=PPP1R12BP2;ID=exon:HG002_chrY_T0001976:2;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25471659	25473628	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG002_chrY_T0001976;gene_id=HG002_chrY_G0000713;Parent=HG002_chrY_T0001976;transcript_name=HG002_chrY_T0001976;gene_name=PPP1R12BP2;ID=intron:HG002_chrY_T0001976:2;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25473629	25473832	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG002_chrY_T0001976;gene_id=HG002_chrY_G0000713;Parent=HG002_chrY_T0001976;transcript_name=HG002_chrY_T0001976;gene_name=PPP1R12BP2;ID=exon:HG002_chrY_T0001976:3;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25473833	25483249	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG002_chrY_T0001976;gene_id=HG002_chrY_G0000713;Parent=HG002_chrY_T0001976;transcript_name=HG002_chrY_T0001976;gene_name=PPP1R12BP2;ID=intron:HG002_chrY_T0001976:3;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25483250	25483339	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG002_chrY_T0001976;gene_id=HG002_chrY_G0000713;Parent=HG002_chrY_T0001976;transcript_name=HG002_chrY_T0001976;gene_name=PPP1R12BP2;ID=exon:HG002_chrY_T0001976:4;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25571439	25641098	.	-	.	source_gene_common_name=DAZ1;source_gene=ENSG00000188120.16;gene_id=HG002_chrY_G0000714;gene_biotype=protein_coding;gene_name=DAZ1;gene_sources=liftoff;ID=HG002_chrY_G0000714;Name=DAZ1
HG002_chrY	CAT	transcript	25571439	25641096	100	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_G0000714;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=HG002_chrY_T0001977;Name=DAZ1
HG002_chrY	CAT	exon	25571439	25573295	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=exon:HG002_chrY_T0001977:0;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25573296	25577258	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=intron:HG002_chrY_T0001977:0;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25577259	25577357	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=exon:HG002_chrY_T0001977:1;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25577294	25577357	.	-	1	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001977:0;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	25577294	25577296	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=stop_codon:HG002_chrY_T0001977;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25577358	25581930	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=intron:HG002_chrY_T0001977:1;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25581931	25581965	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=exon:HG002_chrY_T0001977:2;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25581931	25581965	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001977:1;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25581966	25582709	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=intron:HG002_chrY_T0001977:2;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25582710	25582781	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=exon:HG002_chrY_T0001977:3;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25582710	25582781	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001977:2;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25582782	25585094	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=intron:HG002_chrY_T0001977:3;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25585095	25585166	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=exon:HG002_chrY_T0001977:4;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25585095	25585166	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001977:3;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25585167	25594880	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=intron:HG002_chrY_T0001977:4;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25594881	25594952	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=exon:HG002_chrY_T0001977:5;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25594881	25594952	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001977:4;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25594953	25597257	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=intron:HG002_chrY_T0001977:5;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25597258	25597329	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=exon:HG002_chrY_T0001977:6;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25597258	25597329	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001977:5;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25597330	25599653	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=intron:HG002_chrY_T0001977:6;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25599654	25599725	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=exon:HG002_chrY_T0001977:7;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25599654	25599725	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001977:6;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25599726	25602039	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=intron:HG002_chrY_T0001977:7;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25602040	25602111	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=exon:HG002_chrY_T0001977:8;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25602040	25602111	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001977:7;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25602112	25604435	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=intron:HG002_chrY_T0001977:8;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25604436	25604507	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=exon:HG002_chrY_T0001977:9;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25604436	25604507	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001977:8;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25604508	25606826	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=intron:HG002_chrY_T0001977:9;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25606827	25606898	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=exon:HG002_chrY_T0001977:10;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25606827	25606898	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001977:9;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25606899	25609271	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=intron:HG002_chrY_T0001977:10;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25609272	25609343	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=exon:HG002_chrY_T0001977:11;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25609272	25609343	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001977:10;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25609344	25610743	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=intron:HG002_chrY_T0001977:11;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25610744	25610883	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=exon:HG002_chrY_T0001977:12;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25610744	25610883	.	-	2	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001977:11;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25610884	25610972	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=intron:HG002_chrY_T0001977:12;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25610973	25611036	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=exon:HG002_chrY_T0001977:13;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25610973	25611036	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001977:12;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25611037	25611472	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=intron:HG002_chrY_T0001977:13;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25611473	25611524	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=exon:HG002_chrY_T0001977:14;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25611473	25611524	.	-	1	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001977:13;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25611525	25612084	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=intron:HG002_chrY_T0001977:14;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25612085	25612176	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=exon:HG002_chrY_T0001977:15;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25612085	25612176	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001977:14;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25612177	25612450	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=intron:HG002_chrY_T0001977:15;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25612451	25612597	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=exon:HG002_chrY_T0001977:16;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25612451	25612597	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001977:15;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25612598	25621583	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=intron:HG002_chrY_T0001977:16;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25621584	25621723	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=exon:HG002_chrY_T0001977:17;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25621584	25621723	.	-	2	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001977:16;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25621724	25621812	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=intron:HG002_chrY_T0001977:17;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25621813	25621876	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=exon:HG002_chrY_T0001977:18;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25621813	25621876	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001977:17;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25621877	25622312	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=intron:HG002_chrY_T0001977:18;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25622313	25622364	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=exon:HG002_chrY_T0001977:19;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25622313	25622364	.	-	1	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001977:18;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25622365	25622924	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=intron:HG002_chrY_T0001977:19;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25622925	25623016	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=exon:HG002_chrY_T0001977:20;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25622925	25623016	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001977:19;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25623017	25623290	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=intron:HG002_chrY_T0001977:20;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25623291	25623437	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=exon:HG002_chrY_T0001977:21;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25623291	25623437	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001977:20;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25623438	25632431	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=intron:HG002_chrY_T0001977:21;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25632432	25632571	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=exon:HG002_chrY_T0001977:22;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25632432	25632571	.	-	2	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001977:21;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25632572	25632660	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=intron:HG002_chrY_T0001977:22;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25632661	25632724	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=exon:HG002_chrY_T0001977:23;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25632661	25632724	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001977:22;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25632725	25633160	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=intron:HG002_chrY_T0001977:23;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25633161	25633212	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=exon:HG002_chrY_T0001977:24;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25633161	25633212	.	-	1	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001977:23;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25633213	25633772	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=intron:HG002_chrY_T0001977:24;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25633773	25633864	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=exon:HG002_chrY_T0001977:25;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25633773	25633864	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001977:24;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25633865	25634138	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=intron:HG002_chrY_T0001977:25;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25634139	25634285	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=exon:HG002_chrY_T0001977:26;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25634139	25634285	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001977:25;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25634286	25640885	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=intron:HG002_chrY_T0001977:26;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25640886	25641096	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=exon:HG002_chrY_T0001977:27;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25640886	25640888	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001977:26;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	25640886	25640888	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001977;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001977;transcript_name=HG002_chrY_T0001977;gene_name=DAZ1;ID=start_codon:HG002_chrY_T0001977;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	25571446	25641098	100	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_G0000714;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=HG002_chrY_T0001978;Name=DAZ1
HG002_chrY	CAT	exon	25571446	25573295	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=exon:HG002_chrY_T0001978:0;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25573296	25577258	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=intron:HG002_chrY_T0001978:0;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25577259	25577357	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=exon:HG002_chrY_T0001978:1;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25577294	25577357	.	-	1	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001978:0;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	25577294	25577296	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=stop_codon:HG002_chrY_T0001978;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25577358	25581930	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=intron:HG002_chrY_T0001978:1;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25581931	25581965	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=exon:HG002_chrY_T0001978:2;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25581931	25581965	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001978:1;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25581966	25582709	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=intron:HG002_chrY_T0001978:2;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25582710	25582781	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=exon:HG002_chrY_T0001978:3;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25582710	25582781	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001978:2;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25582782	25594880	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=intron:HG002_chrY_T0001978:3;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25594881	25594952	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=exon:HG002_chrY_T0001978:4;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25594881	25594952	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001978:3;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25594953	25597257	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=intron:HG002_chrY_T0001978:4;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25597258	25597329	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=exon:HG002_chrY_T0001978:5;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25597258	25597329	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001978:4;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25597330	25599653	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=intron:HG002_chrY_T0001978:5;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25599654	25599725	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=exon:HG002_chrY_T0001978:6;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25599654	25599725	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001978:5;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25599726	25602039	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=intron:HG002_chrY_T0001978:6;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25602040	25602111	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=exon:HG002_chrY_T0001978:7;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25602040	25602111	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001978:6;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25602112	25604435	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=intron:HG002_chrY_T0001978:7;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25604436	25604507	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=exon:HG002_chrY_T0001978:8;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25604436	25604507	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001978:7;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25604508	25606826	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=intron:HG002_chrY_T0001978:8;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25606827	25606898	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=exon:HG002_chrY_T0001978:9;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25606827	25606898	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001978:8;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25606899	25609271	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=intron:HG002_chrY_T0001978:9;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25609272	25609343	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=exon:HG002_chrY_T0001978:10;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25609272	25609343	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001978:9;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25609344	25632431	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=intron:HG002_chrY_T0001978:10;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25632432	25632571	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=exon:HG002_chrY_T0001978:11;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25632432	25632571	.	-	2	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001978:10;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25632572	25632660	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=intron:HG002_chrY_T0001978:11;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25632661	25632724	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=exon:HG002_chrY_T0001978:12;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25632661	25632724	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001978:11;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25632725	25633160	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=intron:HG002_chrY_T0001978:12;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25633161	25633212	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=exon:HG002_chrY_T0001978:13;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25633161	25633212	.	-	1	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001978:12;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25633213	25633772	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=intron:HG002_chrY_T0001978:13;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25633773	25633864	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=exon:HG002_chrY_T0001978:14;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25633773	25633864	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001978:13;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25633865	25634138	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=intron:HG002_chrY_T0001978:14;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25634139	25634285	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=exon:HG002_chrY_T0001978:15;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25634139	25634285	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001978:14;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25634286	25640885	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=intron:HG002_chrY_T0001978:15;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25640886	25641098	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=exon:HG002_chrY_T0001978:16;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25640886	25640888	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001978:15;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	25640886	25640888	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001978;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001978;transcript_name=HG002_chrY_T0001978;gene_name=DAZ1;ID=start_codon:HG002_chrY_T0001978;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	25571447	25582896	1000	-	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001979;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_G0000714;transcript_name=HG002_chrY_T0001979;gene_name=DAZ1;ID=HG002_chrY_T0001979;Name=DAZ1
HG002_chrY	CAT	exon	25571447	25573295	.	-	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001979;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001979;transcript_name=HG002_chrY_T0001979;gene_name=DAZ1;ID=exon:HG002_chrY_T0001979:0;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25573296	25577258	.	-	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001979;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001979;transcript_name=HG002_chrY_T0001979;gene_name=DAZ1;ID=intron:HG002_chrY_T0001979:0;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25577259	25577357	.	-	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001979;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001979;transcript_name=HG002_chrY_T0001979;gene_name=DAZ1;ID=exon:HG002_chrY_T0001979:1;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25577358	25580293	.	-	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001979;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001979;transcript_name=HG002_chrY_T0001979;gene_name=DAZ1;ID=intron:HG002_chrY_T0001979:1;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25580294	25580365	.	-	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001979;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001979;transcript_name=HG002_chrY_T0001979;gene_name=DAZ1;ID=exon:HG002_chrY_T0001979:2;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25580366	25581930	.	-	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001979;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001979;transcript_name=HG002_chrY_T0001979;gene_name=DAZ1;ID=intron:HG002_chrY_T0001979:2;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25581931	25581965	.	-	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001979;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001979;transcript_name=HG002_chrY_T0001979;gene_name=DAZ1;ID=exon:HG002_chrY_T0001979:3;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25581966	25582709	.	-	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001979;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001979;transcript_name=HG002_chrY_T0001979;gene_name=DAZ1;ID=intron:HG002_chrY_T0001979:3;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25582710	25582896	.	-	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001979;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001979;transcript_name=HG002_chrY_T0001979;gene_name=DAZ1;ID=exon:HG002_chrY_T0001979:4;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	25572794	25641096	100	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_G0000714;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=HG002_chrY_T0001980;Name=DAZ1
HG002_chrY	CAT	exon	25572794	25573295	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=exon:HG002_chrY_T0001980:0;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25573296	25577258	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=intron:HG002_chrY_T0001980:0;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25577259	25577357	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=exon:HG002_chrY_T0001980:1;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25577294	25577357	.	-	1	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001980:0;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	25577294	25577296	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=stop_codon:HG002_chrY_T0001980;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25577358	25581930	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=intron:HG002_chrY_T0001980:1;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25581931	25581965	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=exon:HG002_chrY_T0001980:2;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25581931	25581965	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001980:1;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25581966	25582709	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=intron:HG002_chrY_T0001980:2;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25582710	25582781	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=exon:HG002_chrY_T0001980:3;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25582710	25582781	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001980:2;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25582782	25585094	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=intron:HG002_chrY_T0001980:3;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25585095	25585166	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=exon:HG002_chrY_T0001980:4;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25585095	25585166	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001980:3;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25585167	25594880	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=intron:HG002_chrY_T0001980:4;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25594881	25594952	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=exon:HG002_chrY_T0001980:5;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25594881	25594952	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001980:4;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25594953	25599653	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=intron:HG002_chrY_T0001980:5;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25599654	25599725	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=exon:HG002_chrY_T0001980:6;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25599654	25599725	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001980:5;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25599726	25604435	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=intron:HG002_chrY_T0001980:6;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25604436	25604507	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=exon:HG002_chrY_T0001980:7;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25604436	25604507	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001980:6;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25604508	25606826	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=intron:HG002_chrY_T0001980:7;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25606827	25606898	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=exon:HG002_chrY_T0001980:8;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25606827	25606898	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001980:7;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25606899	25609271	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=intron:HG002_chrY_T0001980:8;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25609272	25609343	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=exon:HG002_chrY_T0001980:9;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25609272	25609343	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001980:8;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25609344	25632431	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=intron:HG002_chrY_T0001980:9;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25632432	25632571	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=exon:HG002_chrY_T0001980:10;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25632432	25632571	.	-	2	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001980:9;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25632572	25632660	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=intron:HG002_chrY_T0001980:10;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25632661	25632724	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=exon:HG002_chrY_T0001980:11;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25632661	25632724	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001980:10;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25632725	25633160	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=intron:HG002_chrY_T0001980:11;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25633161	25633212	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=exon:HG002_chrY_T0001980:12;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25633161	25633212	.	-	1	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001980:11;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25633213	25633772	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=intron:HG002_chrY_T0001980:12;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25633773	25633864	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=exon:HG002_chrY_T0001980:13;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25633773	25633864	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001980:12;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25633865	25634138	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=intron:HG002_chrY_T0001980:13;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25634139	25634285	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=exon:HG002_chrY_T0001980:14;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25634139	25634285	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001980:13;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25634286	25640885	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=intron:HG002_chrY_T0001980:14;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25640886	25641096	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=exon:HG002_chrY_T0001980:15;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25640886	25640888	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=CDS:HG002_chrY_T0001980:14;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	25640886	25640888	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG002_chrY_T0001980;gene_id=HG002_chrY_G0000714;Parent=HG002_chrY_T0001980;transcript_name=HG002_chrY_T0001980;gene_name=DAZ1;ID=start_codon:HG002_chrY_T0001980;Name=DAZ1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25661535	25719125	.	+	.	source_gene_common_name=DAZ2;source_gene=ENSG00000205944.12;gene_id=HG002_chrY_G0000715;gene_biotype=protein_coding;gene_name=DAZ2;gene_sources=liftoff;ID=HG002_chrY_G0000715;Name=DAZ2
HG002_chrY	CAT	transcript	25661535	25719125	9950	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_G0000715;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=HG002_chrY_T0001981;Name=DAZ2
HG002_chrY	CAT	exon	25661535	25661831	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=exon:HG002_chrY_T0001981:0;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25661829	25661831	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001981:0;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	25661829	25661831	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=start_codon:HG002_chrY_T0001981;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25661832	25668431	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=intron:HG002_chrY_T0001981:0;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25668432	25668578	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=exon:HG002_chrY_T0001981:1;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25668432	25668578	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001981:1;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25668579	25668852	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=intron:HG002_chrY_T0001981:1;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25668853	25668944	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=exon:HG002_chrY_T0001981:2;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25668853	25668944	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001981:2;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25668945	25669504	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=intron:HG002_chrY_T0001981:2;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25669505	25669556	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=exon:HG002_chrY_T0001981:3;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25669505	25669556	.	+	1	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001981:3;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25669557	25669992	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=intron:HG002_chrY_T0001981:3;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25669993	25670056	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=exon:HG002_chrY_T0001981:4;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25669993	25670056	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001981:4;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25670057	25670145	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=intron:HG002_chrY_T0001981:4;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25670146	25670285	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=exon:HG002_chrY_T0001981:5;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25670146	25670285	.	+	2	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001981:5;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25670286	25671685	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=intron:HG002_chrY_T0001981:5;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25671686	25671757	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=exon:HG002_chrY_T0001981:6;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25671686	25671757	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001981:6;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25671758	25674128	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=intron:HG002_chrY_T0001981:6;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25674129	25674200	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=exon:HG002_chrY_T0001981:7;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25674129	25674200	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001981:7;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25674201	25676519	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=intron:HG002_chrY_T0001981:7;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25676520	25676591	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=exon:HG002_chrY_T0001981:8;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25676520	25676591	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001981:8;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25676592	25683694	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=intron:HG002_chrY_T0001981:8;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25683695	25683766	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=exon:HG002_chrY_T0001981:9;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25683695	25683766	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001981:9;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25683767	25686071	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=intron:HG002_chrY_T0001981:9;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25686072	25686143	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=exon:HG002_chrY_T0001981:10;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25686072	25686143	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001981:10;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25686144	25695860	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=intron:HG002_chrY_T0001981:10;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25695861	25695932	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=exon:HG002_chrY_T0001981:11;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25695861	25695932	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001981:11;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25695933	25698244	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=intron:HG002_chrY_T0001981:11;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25698245	25698316	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=exon:HG002_chrY_T0001981:12;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25698245	25698316	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001981:12;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25698317	25700628	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=intron:HG002_chrY_T0001981:12;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25700629	25700700	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=exon:HG002_chrY_T0001981:13;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25700629	25700700	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001981:13;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25700701	25703013	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=intron:HG002_chrY_T0001981:13;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25703014	25703085	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=exon:HG002_chrY_T0001981:14;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25703014	25703085	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001981:14;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25703086	25705397	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=intron:HG002_chrY_T0001981:14;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25705398	25705469	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=exon:HG002_chrY_T0001981:15;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25705398	25705469	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001981:15;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25705470	25707782	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=intron:HG002_chrY_T0001981:15;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25707783	25707854	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=exon:HG002_chrY_T0001981:16;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25707783	25707854	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001981:16;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25707855	25708598	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=intron:HG002_chrY_T0001981:16;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25708599	25708633	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=exon:HG002_chrY_T0001981:17;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25708599	25708633	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001981:17;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25708634	25713206	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=intron:HG002_chrY_T0001981:17;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25713207	25713305	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=exon:HG002_chrY_T0001981:18;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25713207	25713270	.	+	1	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001981:18;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	25713268	25713270	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=stop_codon:HG002_chrY_T0001981;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25713306	25717268	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=intron:HG002_chrY_T0001981:18;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25717269	25719125	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=272.90563636363635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001981;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001981;transcript_name=HG002_chrY_T0001981;gene_name=DAZ2;ID=exon:HG002_chrY_T0001981:19;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	25661621	25719125	9940	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_G0000715;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=HG002_chrY_T0001982;Name=DAZ2
HG002_chrY	CAT	exon	25661621	25661831	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=exon:HG002_chrY_T0001982:0;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25661829	25661831	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001982:0;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	25661829	25661831	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=start_codon:HG002_chrY_T0001982;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25661832	25668431	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=intron:HG002_chrY_T0001982:0;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25668432	25668578	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=exon:HG002_chrY_T0001982:1;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25668432	25668578	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001982:1;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25668579	25668852	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=intron:HG002_chrY_T0001982:1;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25668853	25668944	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=exon:HG002_chrY_T0001982:2;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25668853	25668944	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001982:2;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25668945	25669504	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=intron:HG002_chrY_T0001982:2;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25669505	25669556	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=exon:HG002_chrY_T0001982:3;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25669505	25669556	.	+	1	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001982:3;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25669557	25669992	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=intron:HG002_chrY_T0001982:3;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25669993	25670056	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=exon:HG002_chrY_T0001982:4;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25669993	25670056	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001982:4;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25670057	25670145	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=intron:HG002_chrY_T0001982:4;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25670146	25670285	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=exon:HG002_chrY_T0001982:5;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25670146	25670285	.	+	2	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001982:5;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25670286	25671685	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=intron:HG002_chrY_T0001982:5;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25671686	25671757	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=exon:HG002_chrY_T0001982:6;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25671686	25671757	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001982:6;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25671758	25674128	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=intron:HG002_chrY_T0001982:6;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25674129	25674200	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=exon:HG002_chrY_T0001982:7;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25674129	25674200	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001982:7;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25674201	25676519	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=intron:HG002_chrY_T0001982:7;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25676520	25676591	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=exon:HG002_chrY_T0001982:8;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25676520	25676591	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001982:8;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25676592	25678915	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=intron:HG002_chrY_T0001982:8;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25678916	25678987	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=exon:HG002_chrY_T0001982:9;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25678916	25678987	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001982:9;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25678988	25681298	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=intron:HG002_chrY_T0001982:9;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25681299	25681370	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=exon:HG002_chrY_T0001982:10;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25681299	25681370	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001982:10;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25681371	25683694	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=intron:HG002_chrY_T0001982:10;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25683695	25683766	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=exon:HG002_chrY_T0001982:11;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25683695	25683766	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001982:11;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25683767	25686071	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=intron:HG002_chrY_T0001982:11;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25686072	25686143	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=exon:HG002_chrY_T0001982:12;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25686072	25686143	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001982:12;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25686144	25695860	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=intron:HG002_chrY_T0001982:12;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25695861	25695932	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=exon:HG002_chrY_T0001982:13;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25695861	25695932	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001982:13;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25695933	25698244	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=intron:HG002_chrY_T0001982:13;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25698245	25698316	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=exon:HG002_chrY_T0001982:14;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25698245	25698316	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001982:14;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25698317	25700628	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=intron:HG002_chrY_T0001982:14;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25700629	25700700	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=exon:HG002_chrY_T0001982:15;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25700629	25700700	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001982:15;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25700701	25703013	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=intron:HG002_chrY_T0001982:15;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25703014	25703085	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=exon:HG002_chrY_T0001982:16;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25703014	25703085	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001982:16;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25703086	25705397	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=intron:HG002_chrY_T0001982:16;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25705398	25705469	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=exon:HG002_chrY_T0001982:17;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25705398	25705469	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001982:17;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25705470	25707782	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=intron:HG002_chrY_T0001982:17;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25707783	25707854	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=exon:HG002_chrY_T0001982:18;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25707783	25707854	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001982:18;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25707855	25708598	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=intron:HG002_chrY_T0001982:18;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25708599	25708633	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=exon:HG002_chrY_T0001982:19;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25708599	25708633	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001982:19;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25708634	25713206	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=intron:HG002_chrY_T0001982:19;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25713207	25713305	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=exon:HG002_chrY_T0001982:20;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25713207	25713270	.	+	1	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001982:20;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	25713268	25713270	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=stop_codon:HG002_chrY_T0001982;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25713306	25717268	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=intron:HG002_chrY_T0001982:20;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25717269	25719125	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=255.79277777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001982;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001982;transcript_name=HG002_chrY_T0001982;gene_name=DAZ2;ID=exon:HG002_chrY_T0001982:21;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	25661636	25717768	9910	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_G0000715;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=HG002_chrY_T0001983;Name=DAZ2
HG002_chrY	CAT	exon	25661636	25661831	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=exon:HG002_chrY_T0001983:0;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25661829	25661831	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001983:0;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	25661829	25661831	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=start_codon:HG002_chrY_T0001983;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25661832	25668431	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=intron:HG002_chrY_T0001983:0;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25668432	25668578	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=exon:HG002_chrY_T0001983:1;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25668432	25668578	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001983:1;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25668579	25668852	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=intron:HG002_chrY_T0001983:1;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25668853	25668944	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=exon:HG002_chrY_T0001983:2;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25668853	25668944	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001983:2;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25668945	25669504	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=intron:HG002_chrY_T0001983:2;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25669505	25669556	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=exon:HG002_chrY_T0001983:3;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25669505	25669556	.	+	1	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001983:3;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25669557	25669992	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=intron:HG002_chrY_T0001983:3;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25669993	25670056	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=exon:HG002_chrY_T0001983:4;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25669993	25670056	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001983:4;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25670057	25670145	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=intron:HG002_chrY_T0001983:4;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25670146	25670285	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=exon:HG002_chrY_T0001983:5;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25670146	25670285	.	+	2	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001983:5;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25670286	25671685	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=intron:HG002_chrY_T0001983:5;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25671686	25671757	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=exon:HG002_chrY_T0001983:6;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25671686	25671757	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001983:6;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25671758	25674128	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=intron:HG002_chrY_T0001983:6;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25674129	25674200	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=exon:HG002_chrY_T0001983:7;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25674129	25674200	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001983:7;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25674201	25676519	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=intron:HG002_chrY_T0001983:7;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25676520	25676591	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=exon:HG002_chrY_T0001983:8;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25676520	25676591	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001983:8;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25676592	25686071	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=intron:HG002_chrY_T0001983:8;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25686072	25686143	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=exon:HG002_chrY_T0001983:9;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25686072	25686143	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001983:9;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25686144	25695860	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=intron:HG002_chrY_T0001983:9;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25695861	25695932	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=exon:HG002_chrY_T0001983:10;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25695861	25695932	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001983:10;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25695933	25698244	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=intron:HG002_chrY_T0001983:10;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25698245	25698316	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=exon:HG002_chrY_T0001983:11;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25698245	25698316	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001983:11;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25698317	25700628	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=intron:HG002_chrY_T0001983:11;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25700629	25700700	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=exon:HG002_chrY_T0001983:12;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25700629	25700700	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001983:12;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25700701	25703013	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=intron:HG002_chrY_T0001983:12;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25703014	25703085	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=exon:HG002_chrY_T0001983:13;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25703014	25703085	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001983:13;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25703086	25705397	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=intron:HG002_chrY_T0001983:13;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25705398	25705469	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=exon:HG002_chrY_T0001983:14;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25705398	25705469	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001983:14;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25705470	25707782	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=intron:HG002_chrY_T0001983:14;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25707783	25707854	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=exon:HG002_chrY_T0001983:15;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25707783	25707854	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001983:15;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25707855	25708598	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=intron:HG002_chrY_T0001983:15;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25708599	25708633	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=exon:HG002_chrY_T0001983:16;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25708599	25708633	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001983:16;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25708634	25713206	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=intron:HG002_chrY_T0001983:16;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25713207	25713305	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=exon:HG002_chrY_T0001983:17;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25713207	25713270	.	+	1	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=CDS:HG002_chrY_T0001983:17;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	25713268	25713270	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=stop_codon:HG002_chrY_T0001983;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25713306	25717268	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=intron:HG002_chrY_T0001983:17;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25717269	25717768	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=256.7938695652174;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG002_chrY_T0001983;gene_id=HG002_chrY_G0000715;Parent=HG002_chrY_T0001983;transcript_name=HG002_chrY_T0001983;gene_name=DAZ2;ID=exon:HG002_chrY_T0001983:18;Name=DAZ2;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25789278	25790438	.	-	.	source_gene_common_name=TRIM60P9Y;source_gene=ENSG00000227251.1;gene_id=HG002_chrY_G0000716;gene_biotype=processed_pseudogene;gene_name=TRIM60P9Y;gene_sources=liftoff;ID=HG002_chrY_G0000716;Name=TRIM60P9Y
HG002_chrY	CAT	transcript	25789278	25790438	1000	-	.	source_transcript=ENST00000438459.1;source_transcript_name=TRIM60P9Y-201;source_gene=ENSG00000227251.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227251.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438459.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P9Y;transcript_id=HG002_chrY_T0001984;gene_id=HG002_chrY_G0000716;Parent=HG002_chrY_G0000716;transcript_name=HG002_chrY_T0001984;gene_name=TRIM60P9Y;ID=HG002_chrY_T0001984;Name=TRIM60P9Y
HG002_chrY	CAT	exon	25789278	25789793	.	-	.	source_transcript=ENST00000438459.1;source_transcript_name=TRIM60P9Y-201;source_gene=ENSG00000227251.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227251.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438459.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P9Y;transcript_id=HG002_chrY_T0001984;gene_id=HG002_chrY_G0000716;Parent=HG002_chrY_T0001984;transcript_name=HG002_chrY_T0001984;gene_name=TRIM60P9Y;ID=exon:HG002_chrY_T0001984:0;Name=TRIM60P9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25789794	25790138	.	-	.	source_transcript=ENST00000438459.1;source_transcript_name=TRIM60P9Y-201;source_gene=ENSG00000227251.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227251.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438459.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P9Y;transcript_id=HG002_chrY_T0001984;gene_id=HG002_chrY_G0000716;Parent=HG002_chrY_T0001984;transcript_name=HG002_chrY_T0001984;gene_name=TRIM60P9Y;ID=intron:HG002_chrY_T0001984:0;Name=TRIM60P9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25790139	25790438	.	-	.	source_transcript=ENST00000438459.1;source_transcript_name=TRIM60P9Y-201;source_gene=ENSG00000227251.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227251.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438459.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P9Y;transcript_id=HG002_chrY_T0001984;gene_id=HG002_chrY_G0000716;Parent=HG002_chrY_T0001984;transcript_name=HG002_chrY_T0001984;gene_name=TRIM60P9Y;ID=exon:HG002_chrY_T0001984:1;Name=TRIM60P9Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25797289	25799237	.	-	.	source_gene_common_name=ZNF736P3Y;source_gene=ENSG00000233126.3;gene_id=HG002_chrY_G0000717;gene_biotype=processed_pseudogene;gene_name=ZNF736P3Y;gene_sources=liftoff;ID=HG002_chrY_G0000717;Name=ZNF736P3Y
HG002_chrY	CAT	transcript	25797289	25799237	1000	-	.	source_transcript=ENST00000428264.1;source_transcript_name=ZNF736P3Y-201;source_gene=ENSG00000233126.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233126.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428264.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P3Y;transcript_id=HG002_chrY_T0001985;gene_id=HG002_chrY_G0000717;Parent=HG002_chrY_G0000717;transcript_name=HG002_chrY_T0001985;gene_name=ZNF736P3Y;ID=HG002_chrY_T0001985;Name=ZNF736P3Y
HG002_chrY	CAT	exon	25797289	25798582	.	-	.	source_transcript=ENST00000428264.1;source_transcript_name=ZNF736P3Y-201;source_gene=ENSG00000233126.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233126.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P3Y;transcript_id=HG002_chrY_T0001985;gene_id=HG002_chrY_G0000717;Parent=HG002_chrY_T0001985;transcript_name=HG002_chrY_T0001985;gene_name=ZNF736P3Y;ID=exon:HG002_chrY_T0001985:0;Name=ZNF736P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25798583	25798747	.	-	.	source_transcript=ENST00000428264.1;source_transcript_name=ZNF736P3Y-201;source_gene=ENSG00000233126.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233126.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P3Y;transcript_id=HG002_chrY_T0001985;gene_id=HG002_chrY_G0000717;Parent=HG002_chrY_T0001985;transcript_name=HG002_chrY_T0001985;gene_name=ZNF736P3Y;ID=intron:HG002_chrY_T0001985:0;Name=ZNF736P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25798748	25798804	.	-	.	source_transcript=ENST00000428264.1;source_transcript_name=ZNF736P3Y-201;source_gene=ENSG00000233126.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233126.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P3Y;transcript_id=HG002_chrY_T0001985;gene_id=HG002_chrY_G0000717;Parent=HG002_chrY_T0001985;transcript_name=HG002_chrY_T0001985;gene_name=ZNF736P3Y;ID=exon:HG002_chrY_T0001985:1;Name=ZNF736P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25798805	25799123	.	-	.	source_transcript=ENST00000428264.1;source_transcript_name=ZNF736P3Y-201;source_gene=ENSG00000233126.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233126.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P3Y;transcript_id=HG002_chrY_T0001985;gene_id=HG002_chrY_G0000717;Parent=HG002_chrY_T0001985;transcript_name=HG002_chrY_T0001985;gene_name=ZNF736P3Y;ID=intron:HG002_chrY_T0001985:1;Name=ZNF736P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25799124	25799237	.	-	.	source_transcript=ENST00000428264.1;source_transcript_name=ZNF736P3Y-201;source_gene=ENSG00000233126.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233126.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P3Y;transcript_id=HG002_chrY_T0001985;gene_id=HG002_chrY_G0000717;Parent=HG002_chrY_T0001985;transcript_name=HG002_chrY_T0001985;gene_name=ZNF736P3Y;ID=exon:HG002_chrY_T0001985:2;Name=ZNF736P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25821819	25822888	.	-	.	source_gene_common_name=TRIM60P8Y;source_gene=ENSG00000232764.1;gene_id=HG002_chrY_G0000718;gene_biotype=processed_pseudogene;gene_name=TRIM60P8Y;gene_sources=liftoff;ID=HG002_chrY_G0000718;Name=TRIM60P8Y
HG002_chrY	CAT	transcript	25821819	25822888	1000	-	.	source_transcript=ENST00000436338.1;source_transcript_name=TRIM60P8Y-201;source_gene=ENSG00000232764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436338.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P8Y;transcript_id=HG002_chrY_T0001986;gene_id=HG002_chrY_G0000718;Parent=HG002_chrY_G0000718;transcript_name=HG002_chrY_T0001986;gene_name=TRIM60P8Y;ID=HG002_chrY_T0001986;Name=TRIM60P8Y
HG002_chrY	CAT	exon	25821819	25822329	.	-	.	source_transcript=ENST00000436338.1;source_transcript_name=TRIM60P8Y-201;source_gene=ENSG00000232764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436338.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P8Y;transcript_id=HG002_chrY_T0001986;gene_id=HG002_chrY_G0000718;Parent=HG002_chrY_T0001986;transcript_name=HG002_chrY_T0001986;gene_name=TRIM60P8Y;ID=exon:HG002_chrY_T0001986:0;Name=TRIM60P8Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25822330	25822637	.	-	.	source_transcript=ENST00000436338.1;source_transcript_name=TRIM60P8Y-201;source_gene=ENSG00000232764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436338.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P8Y;transcript_id=HG002_chrY_T0001986;gene_id=HG002_chrY_G0000718;Parent=HG002_chrY_T0001986;transcript_name=HG002_chrY_T0001986;gene_name=TRIM60P8Y;ID=intron:HG002_chrY_T0001986:0;Name=TRIM60P8Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25822638	25822888	.	-	.	source_transcript=ENST00000436338.1;source_transcript_name=TRIM60P8Y-201;source_gene=ENSG00000232764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436338.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P8Y;transcript_id=HG002_chrY_T0001986;gene_id=HG002_chrY_G0000718;Parent=HG002_chrY_T0001986;transcript_name=HG002_chrY_T0001986;gene_name=TRIM60P8Y;ID=exon:HG002_chrY_T0001986:1;Name=TRIM60P8Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25830616	25831419	.	-	.	source_gene_common_name=ZNF736P5Y;source_gene=ENSG00000230819.1;alternative_source_transcripts=ENST00000451173.1;gene_id=HG002_chrY_G0000719;gene_biotype=processed_pseudogene;gene_name=ZNF736P5Y;gene_sources=liftoff;ID=HG002_chrY_G0000719;Name=ZNF736P5Y
HG002_chrY	CAT	transcript	25830616	25831419	1000	-	.	source_transcript=ENST00000451173.1;source_transcript_name=ZNF736P5Y-201;source_gene=ENSG00000230819.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000230819.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000451173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451173.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P5Y;alternative_source_transcripts=ENST00000451173.1;transcript_id=HG002_chrY_T0001987;gene_id=HG002_chrY_G0000719;Parent=HG002_chrY_G0000719;transcript_name=HG002_chrY_T0001987;gene_name=ZNF736P5Y;ID=HG002_chrY_T0001987;Name=ZNF736P5Y
HG002_chrY	CAT	exon	25830616	25831419	.	-	.	source_transcript=ENST00000451173.1;source_transcript_name=ZNF736P5Y-201;source_gene=ENSG00000230819.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000230819.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000451173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451173.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P5Y;alternative_source_transcripts=ENST00000451173.1;transcript_id=HG002_chrY_T0001987;gene_id=HG002_chrY_G0000719;Parent=HG002_chrY_T0001987;transcript_name=HG002_chrY_T0001987;gene_name=ZNF736P5Y;ID=exon:HG002_chrY_T0001987:0;Name=ZNF736P5Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25843017	25874664	.	-	.	source_gene_common_name=BPY2;source_gene=ENSG00000183753.10;gene_id=HG002_chrY_G0000720;gene_biotype=protein_coding;gene_name=BPY2;gene_sources=liftoff;ID=HG002_chrY_G0000720;Name=BPY2
HG002_chrY	CAT	transcript	25843017	25864220	100	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001988;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_G0000720;transcript_name=HG002_chrY_T0001988;gene_name=BPY2;ID=HG002_chrY_T0001988;Name=BPY2
HG002_chrY	CAT	exon	25843017	25843338	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001988;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001988;transcript_name=HG002_chrY_T0001988;gene_name=BPY2;ID=exon:HG002_chrY_T0001988:0;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25843339	25843432	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001988;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001988;transcript_name=HG002_chrY_T0001988;gene_name=BPY2;ID=intron:HG002_chrY_T0001988:0;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25843433	25843557	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001988;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001988;transcript_name=HG002_chrY_T0001988;gene_name=BPY2;ID=exon:HG002_chrY_T0001988:1;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25843558	25850107	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001988;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001988;transcript_name=HG002_chrY_T0001988;gene_name=BPY2;ID=intron:HG002_chrY_T0001988:1;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25850108	25850232	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001988;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001988;transcript_name=HG002_chrY_T0001988;gene_name=BPY2;ID=exon:HG002_chrY_T0001988:2;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25850214	25850232	.	-	1	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001988;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001988;transcript_name=HG002_chrY_T0001988;gene_name=BPY2;ID=CDS:HG002_chrY_T0001988:0;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	25850214	25850216	.	-	0	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001988;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001988;transcript_name=HG002_chrY_T0001988;gene_name=BPY2;ID=stop_codon:HG002_chrY_T0001988;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25850233	25850924	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001988;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001988;transcript_name=HG002_chrY_T0001988;gene_name=BPY2;ID=intron:HG002_chrY_T0001988:2;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25850925	25851030	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001988;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001988;transcript_name=HG002_chrY_T0001988;gene_name=BPY2;ID=exon:HG002_chrY_T0001988:3;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25850925	25851030	.	-	2	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001988;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001988;transcript_name=HG002_chrY_T0001988;gene_name=BPY2;ID=CDS:HG002_chrY_T0001988:1;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25851031	25853884	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001988;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001988;transcript_name=HG002_chrY_T0001988;gene_name=BPY2;ID=intron:HG002_chrY_T0001988:3;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25853885	25854002	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001988;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001988;transcript_name=HG002_chrY_T0001988;gene_name=BPY2;ID=exon:HG002_chrY_T0001988:4;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25853885	25854002	.	-	0	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001988;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001988;transcript_name=HG002_chrY_T0001988;gene_name=BPY2;ID=CDS:HG002_chrY_T0001988:2;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25854003	25856061	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001988;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001988;transcript_name=HG002_chrY_T0001988;gene_name=BPY2;ID=intron:HG002_chrY_T0001988:4;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25856062	25856180	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001988;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001988;transcript_name=HG002_chrY_T0001988;gene_name=BPY2;ID=exon:HG002_chrY_T0001988:5;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25856062	25856139	.	-	0	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001988;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001988;transcript_name=HG002_chrY_T0001988;gene_name=BPY2;ID=CDS:HG002_chrY_T0001988:3;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	25856137	25856139	.	-	0	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001988;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001988;transcript_name=HG002_chrY_T0001988;gene_name=BPY2;ID=start_codon:HG002_chrY_T0001988;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25856181	25860589	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001988;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001988;transcript_name=HG002_chrY_T0001988;gene_name=BPY2;ID=intron:HG002_chrY_T0001988:5;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25860590	25860726	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001988;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001988;transcript_name=HG002_chrY_T0001988;gene_name=BPY2;ID=exon:HG002_chrY_T0001988:6;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25860727	25863791	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001988;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001988;transcript_name=HG002_chrY_T0001988;gene_name=BPY2;ID=intron:HG002_chrY_T0001988:6;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25863792	25863914	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001988;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001988;transcript_name=HG002_chrY_T0001988;gene_name=BPY2;ID=exon:HG002_chrY_T0001988:7;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25863915	25864189	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001988;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001988;transcript_name=HG002_chrY_T0001988;gene_name=BPY2;ID=intron:HG002_chrY_T0001988:7;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25864190	25864220	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001988;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001988;transcript_name=HG002_chrY_T0001988;gene_name=BPY2;ID=exon:HG002_chrY_T0001988:8;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	25843076	25864196	1000	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001989;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_G0000720;transcript_name=HG002_chrY_T0001989;gene_name=BPY2;ID=HG002_chrY_T0001989;Name=BPY2
HG002_chrY	CAT	exon	25843076	25843338	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001989;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001989;transcript_name=HG002_chrY_T0001989;gene_name=BPY2;ID=exon:HG002_chrY_T0001989:0;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25843339	25843427	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001989;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001989;transcript_name=HG002_chrY_T0001989;gene_name=BPY2;ID=intron:HG002_chrY_T0001989:0;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25843428	25843557	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001989;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001989;transcript_name=HG002_chrY_T0001989;gene_name=BPY2;ID=exon:HG002_chrY_T0001989:1;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25843558	25850107	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001989;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001989;transcript_name=HG002_chrY_T0001989;gene_name=BPY2;ID=intron:HG002_chrY_T0001989:1;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25850108	25850232	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001989;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001989;transcript_name=HG002_chrY_T0001989;gene_name=BPY2;ID=exon:HG002_chrY_T0001989:2;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25850233	25850924	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001989;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001989;transcript_name=HG002_chrY_T0001989;gene_name=BPY2;ID=intron:HG002_chrY_T0001989:2;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25850925	25851030	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001989;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001989;transcript_name=HG002_chrY_T0001989;gene_name=BPY2;ID=exon:HG002_chrY_T0001989:3;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25851031	25856061	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001989;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001989;transcript_name=HG002_chrY_T0001989;gene_name=BPY2;ID=intron:HG002_chrY_T0001989:3;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25856062	25856180	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001989;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001989;transcript_name=HG002_chrY_T0001989;gene_name=BPY2;ID=exon:HG002_chrY_T0001989:4;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25856181	25860589	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001989;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001989;transcript_name=HG002_chrY_T0001989;gene_name=BPY2;ID=intron:HG002_chrY_T0001989:4;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25860590	25860726	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001989;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001989;transcript_name=HG002_chrY_T0001989;gene_name=BPY2;ID=exon:HG002_chrY_T0001989:5;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25860727	25863791	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001989;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001989;transcript_name=HG002_chrY_T0001989;gene_name=BPY2;ID=intron:HG002_chrY_T0001989:5;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25863792	25863914	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001989;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001989;transcript_name=HG002_chrY_T0001989;gene_name=BPY2;ID=exon:HG002_chrY_T0001989:6;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25863915	25864189	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001989;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001989;transcript_name=HG002_chrY_T0001989;gene_name=BPY2;ID=intron:HG002_chrY_T0001989:6;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25864190	25864196	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001989;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001989;transcript_name=HG002_chrY_T0001989;gene_name=BPY2;ID=exon:HG002_chrY_T0001989:7;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	25850214	25856139	100	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001990;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_G0000720;transcript_name=HG002_chrY_T0001990;gene_name=BPY2;ID=HG002_chrY_T0001990;Name=BPY2
HG002_chrY	CAT	exon	25850214	25850232	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001990;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001990;transcript_name=HG002_chrY_T0001990;gene_name=BPY2;ID=exon:HG002_chrY_T0001990:0;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25850214	25850232	.	-	1	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001990;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001990;transcript_name=HG002_chrY_T0001990;gene_name=BPY2;ID=CDS:HG002_chrY_T0001990:0;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	25850214	25850216	.	-	0	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001990;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001990;transcript_name=HG002_chrY_T0001990;gene_name=BPY2;ID=stop_codon:HG002_chrY_T0001990;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25850233	25850924	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001990;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001990;transcript_name=HG002_chrY_T0001990;gene_name=BPY2;ID=intron:HG002_chrY_T0001990:0;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25850925	25851030	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001990;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001990;transcript_name=HG002_chrY_T0001990;gene_name=BPY2;ID=exon:HG002_chrY_T0001990:1;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25850925	25851030	.	-	2	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001990;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001990;transcript_name=HG002_chrY_T0001990;gene_name=BPY2;ID=CDS:HG002_chrY_T0001990:1;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25851031	25853884	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001990;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001990;transcript_name=HG002_chrY_T0001990;gene_name=BPY2;ID=intron:HG002_chrY_T0001990:1;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25853885	25854002	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001990;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001990;transcript_name=HG002_chrY_T0001990;gene_name=BPY2;ID=exon:HG002_chrY_T0001990:2;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25853885	25854002	.	-	0	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001990;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001990;transcript_name=HG002_chrY_T0001990;gene_name=BPY2;ID=CDS:HG002_chrY_T0001990:2;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25854003	25856061	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001990;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001990;transcript_name=HG002_chrY_T0001990;gene_name=BPY2;ID=intron:HG002_chrY_T0001990:2;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25856062	25856139	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001990;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001990;transcript_name=HG002_chrY_T0001990;gene_name=BPY2;ID=exon:HG002_chrY_T0001990:3;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25856062	25856139	.	-	0	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001990;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001990;transcript_name=HG002_chrY_T0001990;gene_name=BPY2;ID=CDS:HG002_chrY_T0001990:3;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	25856137	25856139	.	-	0	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001990;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001990;transcript_name=HG002_chrY_T0001990;gene_name=BPY2;ID=start_codon:HG002_chrY_T0001990;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	25856107	25874664	100	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001991;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_G0000720;transcript_name=HG002_chrY_T0001991;gene_name=BPY2;ID=HG002_chrY_T0001991;Name=BPY2
HG002_chrY	CAT	exon	25856107	25856180	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001991;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001991;transcript_name=HG002_chrY_T0001991;gene_name=BPY2;ID=exon:HG002_chrY_T0001991:0;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	25856107	25856139	.	-	0	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001991;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001991;transcript_name=HG002_chrY_T0001991;gene_name=BPY2;ID=CDS:HG002_chrY_T0001991:0;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	25856137	25856139	.	-	0	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001991;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001991;transcript_name=HG002_chrY_T0001991;gene_name=BPY2;ID=start_codon:HG002_chrY_T0001991;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25856181	25860589	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001991;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001991;transcript_name=HG002_chrY_T0001991;gene_name=BPY2;ID=intron:HG002_chrY_T0001991:0;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25860590	25860726	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001991;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001991;transcript_name=HG002_chrY_T0001991;gene_name=BPY2;ID=exon:HG002_chrY_T0001991:1;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25860727	25863791	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001991;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001991;transcript_name=HG002_chrY_T0001991;gene_name=BPY2;ID=intron:HG002_chrY_T0001991:1;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25863792	25863914	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001991;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001991;transcript_name=HG002_chrY_T0001991;gene_name=BPY2;ID=exon:HG002_chrY_T0001991:2;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25863915	25864266	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001991;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001991;transcript_name=HG002_chrY_T0001991;gene_name=BPY2;ID=intron:HG002_chrY_T0001991:2;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25864267	25864335	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001991;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001991;transcript_name=HG002_chrY_T0001991;gene_name=BPY2;ID=exon:HG002_chrY_T0001991:3;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25864336	25874508	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001991;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001991;transcript_name=HG002_chrY_T0001991;gene_name=BPY2;ID=intron:HG002_chrY_T0001991:3;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25874509	25874664	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG002_chrY_T0001991;gene_id=HG002_chrY_G0000720;Parent=HG002_chrY_T0001991;transcript_name=HG002_chrY_T0001991;gene_name=BPY2;ID=exon:HG002_chrY_T0001991:4;Name=BPY2;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25875199	25912018	.	-	.	source_gene_common_name=TTTY4C;source_gene=ENSG00000228296.1;gene_id=HG002_chrY_G0000721;gene_biotype=lncRNA;gene_name=TTTY4C;gene_sources=liftoff;ID=HG002_chrY_G0000721;Name=TTTY4C
HG002_chrY	CAT	transcript	25875199	25912018	1000	-	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;transcript_id=HG002_chrY_T0001992;gene_id=HG002_chrY_G0000721;Parent=HG002_chrY_G0000721;transcript_name=HG002_chrY_T0001992;gene_name=TTTY4C;ID=HG002_chrY_T0001992;Name=TTTY4C
HG002_chrY	CAT	exon	25875199	25876199	.	-	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;transcript_id=HG002_chrY_T0001992;gene_id=HG002_chrY_G0000721;Parent=HG002_chrY_T0001992;transcript_name=HG002_chrY_T0001992;gene_name=TTTY4C;ID=exon:HG002_chrY_T0001992:0;Name=TTTY4C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25876200	25882867	.	-	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;transcript_id=HG002_chrY_T0001992;gene_id=HG002_chrY_G0000721;Parent=HG002_chrY_T0001992;transcript_name=HG002_chrY_T0001992;gene_name=TTTY4C;ID=intron:HG002_chrY_T0001992:0;Name=TTTY4C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25882868	25882975	.	-	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;transcript_id=HG002_chrY_T0001992;gene_id=HG002_chrY_G0000721;Parent=HG002_chrY_T0001992;transcript_name=HG002_chrY_T0001992;gene_name=TTTY4C;ID=exon:HG002_chrY_T0001992:1;Name=TTTY4C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25882976	25884779	.	-	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;transcript_id=HG002_chrY_T0001992;gene_id=HG002_chrY_G0000721;Parent=HG002_chrY_T0001992;transcript_name=HG002_chrY_T0001992;gene_name=TTTY4C;ID=intron:HG002_chrY_T0001992:1;Name=TTTY4C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25884780	25884855	.	-	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;transcript_id=HG002_chrY_T0001992;gene_id=HG002_chrY_G0000721;Parent=HG002_chrY_T0001992;transcript_name=HG002_chrY_T0001992;gene_name=TTTY4C;ID=exon:HG002_chrY_T0001992:2;Name=TTTY4C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25884856	25911857	.	-	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;transcript_id=HG002_chrY_T0001992;gene_id=HG002_chrY_G0000721;Parent=HG002_chrY_T0001992;transcript_name=HG002_chrY_T0001992;gene_name=TTTY4C;ID=intron:HG002_chrY_T0001992:2;Name=TTTY4C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25911858	25912018	.	-	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;transcript_id=HG002_chrY_T0001992;gene_id=HG002_chrY_G0000721;Parent=HG002_chrY_T0001992;transcript_name=HG002_chrY_T0001992;gene_name=TTTY4C;ID=exon:HG002_chrY_T0001992:3;Name=TTTY4C;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25980726	25981968	.	+	.	source_gene_common_name=ZNF736P4Y;source_gene=ENSG00000236379.2;alternative_source_transcripts=ENST00000454995.1;gene_id=HG002_chrY_G0000722;gene_biotype=processed_pseudogene;gene_name=ZNF736P4Y;gene_sources=liftoff;ID=HG002_chrY_G0000722;Name=ZNF736P4Y
HG002_chrY	CAT	transcript	25980726	25981968	1000	+	.	source_transcript=ENST00000454995.1;source_transcript_name=ZNF736P4Y-201;source_gene=ENSG00000236379.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236379.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454995.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P4Y;alternative_source_transcripts=ENST00000454995.1;transcript_id=HG002_chrY_T0001993;gene_id=HG002_chrY_G0000722;Parent=HG002_chrY_G0000722;transcript_name=HG002_chrY_T0001993;gene_name=ZNF736P4Y;ID=HG002_chrY_T0001993;Name=ZNF736P4Y
HG002_chrY	CAT	exon	25980726	25981968	.	+	.	source_transcript=ENST00000454995.1;source_transcript_name=ZNF736P4Y-201;source_gene=ENSG00000236379.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236379.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P4Y;alternative_source_transcripts=ENST00000454995.1;transcript_id=HG002_chrY_T0001993;gene_id=HG002_chrY_G0000722;Parent=HG002_chrY_T0001993;transcript_name=HG002_chrY_T0001993;gene_name=ZNF736P4Y;ID=exon:HG002_chrY_T0001993:0;Name=ZNF736P4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25986647	25987364	.	+	.	source_gene_common_name=ENSG00000274899;source_gene=ENSG00000274899.1;gene_id=HG002_chrY_G0000723;gene_biotype=processed_pseudogene;gene_name=ENSG00000274899;gene_sources=liftoff;ID=HG002_chrY_G0000723;Name=ENSG00000274899
HG002_chrY	CAT	transcript	25986647	25987364	1000	+	.	source_transcript=ENST00000619436.1;source_transcript_name=ENST00000619436;source_gene=ENSG00000274899.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274899.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619436.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274899;transcript_id=HG002_chrY_T0001994;gene_id=HG002_chrY_G0000723;Parent=HG002_chrY_G0000723;transcript_name=HG002_chrY_T0001994;gene_name=ENSG00000274899;ID=HG002_chrY_T0001994;Name=ENSG00000274899
HG002_chrY	CAT	exon	25986647	25986919	.	+	.	source_transcript=ENST00000619436.1;source_transcript_name=ENST00000619436;source_gene=ENSG00000274899.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274899.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274899;transcript_id=HG002_chrY_T0001994;gene_id=HG002_chrY_G0000723;Parent=HG002_chrY_T0001994;transcript_name=HG002_chrY_T0001994;gene_name=ENSG00000274899;ID=exon:HG002_chrY_T0001994:0;Name=ENSG00000274899;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25986920	25987222	.	+	.	source_transcript=ENST00000619436.1;source_transcript_name=ENST00000619436;source_gene=ENSG00000274899.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274899.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274899;transcript_id=HG002_chrY_T0001994;gene_id=HG002_chrY_G0000723;Parent=HG002_chrY_T0001994;transcript_name=HG002_chrY_T0001994;gene_name=ENSG00000274899;ID=intron:HG002_chrY_T0001994:0;Name=ENSG00000274899;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25987223	25987364	.	+	.	source_transcript=ENST00000619436.1;source_transcript_name=ENST00000619436;source_gene=ENSG00000274899.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274899.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274899;transcript_id=HG002_chrY_T0001994;gene_id=HG002_chrY_G0000723;Parent=HG002_chrY_T0001994;transcript_name=HG002_chrY_T0001994;gene_name=ENSG00000274899;ID=exon:HG002_chrY_T0001994:1;Name=ENSG00000274899;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	25994395	26025982	.	-	.	source_gene_common_name=TTTY17C;source_gene=ENSG00000223641.3;gene_id=HG002_chrY_G0000724;gene_biotype=lncRNA;gene_name=TTTY17C;gene_sources=liftoff;ID=HG002_chrY_G0000724;Name=TTTY17C
HG002_chrY	CAT	transcript	25994395	26025982	1000	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG002_chrY_T0001995;gene_id=HG002_chrY_G0000724;Parent=HG002_chrY_G0000724;transcript_name=HG002_chrY_T0001995;gene_name=TTTY17C;ID=HG002_chrY_T0001995;Name=TTTY17C
HG002_chrY	CAT	exon	25994395	25994715	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG002_chrY_T0001995;gene_id=HG002_chrY_G0000724;Parent=HG002_chrY_T0001995;transcript_name=HG002_chrY_T0001995;gene_name=TTTY17C;ID=exon:HG002_chrY_T0001995:0;Name=TTTY17C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25994716	25995715	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG002_chrY_T0001995;gene_id=HG002_chrY_G0000724;Parent=HG002_chrY_T0001995;transcript_name=HG002_chrY_T0001995;gene_name=TTTY17C;ID=intron:HG002_chrY_T0001995:0;Name=TTTY17C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25995716	25995876	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG002_chrY_T0001995;gene_id=HG002_chrY_G0000724;Parent=HG002_chrY_T0001995;transcript_name=HG002_chrY_T0001995;gene_name=TTTY17C;ID=exon:HG002_chrY_T0001995:1;Name=TTTY17C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25995877	25996842	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG002_chrY_T0001995;gene_id=HG002_chrY_G0000724;Parent=HG002_chrY_T0001995;transcript_name=HG002_chrY_T0001995;gene_name=TTTY17C;ID=intron:HG002_chrY_T0001995:1;Name=TTTY17C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25996843	25996967	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG002_chrY_T0001995;gene_id=HG002_chrY_G0000724;Parent=HG002_chrY_T0001995;transcript_name=HG002_chrY_T0001995;gene_name=TTTY17C;ID=exon:HG002_chrY_T0001995:2;Name=TTTY17C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25996968	26007093	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG002_chrY_T0001995;gene_id=HG002_chrY_G0000724;Parent=HG002_chrY_T0001995;transcript_name=HG002_chrY_T0001995;gene_name=TTTY17C;ID=intron:HG002_chrY_T0001995:2;Name=TTTY17C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26007094	26007210	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG002_chrY_T0001995;gene_id=HG002_chrY_G0000724;Parent=HG002_chrY_T0001995;transcript_name=HG002_chrY_T0001995;gene_name=TTTY17C;ID=exon:HG002_chrY_T0001995:3;Name=TTTY17C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26007211	26025448	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG002_chrY_T0001995;gene_id=HG002_chrY_G0000724;Parent=HG002_chrY_T0001995;transcript_name=HG002_chrY_T0001995;gene_name=TTTY17C;ID=intron:HG002_chrY_T0001995:3;Name=TTTY17C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26025449	26025518	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG002_chrY_T0001995;gene_id=HG002_chrY_G0000724;Parent=HG002_chrY_T0001995;transcript_name=HG002_chrY_T0001995;gene_name=TTTY17C;ID=exon:HG002_chrY_T0001995:4;Name=TTTY17C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26025519	26025912	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG002_chrY_T0001995;gene_id=HG002_chrY_G0000724;Parent=HG002_chrY_T0001995;transcript_name=HG002_chrY_T0001995;gene_name=TTTY17C;ID=intron:HG002_chrY_T0001995:4;Name=TTTY17C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26025913	26025982	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG002_chrY_T0001995;gene_id=HG002_chrY_G0000724;Parent=HG002_chrY_T0001995;transcript_name=HG002_chrY_T0001995;gene_name=TTTY17C;ID=exon:HG002_chrY_T0001995:5;Name=TTTY17C;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	25994395	26025850	1000	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG002_chrY_T0001996;gene_id=HG002_chrY_G0000724;Parent=HG002_chrY_G0000724;transcript_name=HG002_chrY_T0001996;gene_name=TTTY17C;ID=HG002_chrY_T0001996;Name=TTTY17C
HG002_chrY	CAT	exon	25994395	25994715	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG002_chrY_T0001996;gene_id=HG002_chrY_G0000724;Parent=HG002_chrY_T0001996;transcript_name=HG002_chrY_T0001996;gene_name=TTTY17C;ID=exon:HG002_chrY_T0001996:0;Name=TTTY17C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25994716	25995715	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG002_chrY_T0001996;gene_id=HG002_chrY_G0000724;Parent=HG002_chrY_T0001996;transcript_name=HG002_chrY_T0001996;gene_name=TTTY17C;ID=intron:HG002_chrY_T0001996:0;Name=TTTY17C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25995716	25995876	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG002_chrY_T0001996;gene_id=HG002_chrY_G0000724;Parent=HG002_chrY_T0001996;transcript_name=HG002_chrY_T0001996;gene_name=TTTY17C;ID=exon:HG002_chrY_T0001996:1;Name=TTTY17C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25995877	25996842	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG002_chrY_T0001996;gene_id=HG002_chrY_G0000724;Parent=HG002_chrY_T0001996;transcript_name=HG002_chrY_T0001996;gene_name=TTTY17C;ID=intron:HG002_chrY_T0001996:1;Name=TTTY17C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	25996843	25996967	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG002_chrY_T0001996;gene_id=HG002_chrY_G0000724;Parent=HG002_chrY_T0001996;transcript_name=HG002_chrY_T0001996;gene_name=TTTY17C;ID=exon:HG002_chrY_T0001996:2;Name=TTTY17C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	25996968	26012732	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG002_chrY_T0001996;gene_id=HG002_chrY_G0000724;Parent=HG002_chrY_T0001996;transcript_name=HG002_chrY_T0001996;gene_name=TTTY17C;ID=intron:HG002_chrY_T0001996:2;Name=TTTY17C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26012733	26012841	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG002_chrY_T0001996;gene_id=HG002_chrY_G0000724;Parent=HG002_chrY_T0001996;transcript_name=HG002_chrY_T0001996;gene_name=TTTY17C;ID=exon:HG002_chrY_T0001996:3;Name=TTTY17C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26012842	26025448	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG002_chrY_T0001996;gene_id=HG002_chrY_G0000724;Parent=HG002_chrY_T0001996;transcript_name=HG002_chrY_T0001996;gene_name=TTTY17C;ID=intron:HG002_chrY_T0001996:3;Name=TTTY17C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26025449	26025518	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG002_chrY_T0001996;gene_id=HG002_chrY_G0000724;Parent=HG002_chrY_T0001996;transcript_name=HG002_chrY_T0001996;gene_name=TTTY17C;ID=exon:HG002_chrY_T0001996:4;Name=TTTY17C;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26025519	26025804	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG002_chrY_T0001996;gene_id=HG002_chrY_G0000724;Parent=HG002_chrY_T0001996;transcript_name=HG002_chrY_T0001996;gene_name=TTTY17C;ID=intron:HG002_chrY_T0001996:4;Name=TTTY17C;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26025805	26025850	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG002_chrY_T0001996;gene_id=HG002_chrY_G0000724;Parent=HG002_chrY_T0001996;transcript_name=HG002_chrY_T0001996;gene_name=TTTY17C;ID=exon:HG002_chrY_T0001996:5;Name=TTTY17C;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26026296	26031386	.	+	.	source_gene_common_name=ENSG00000294545;source_gene=ENSG00000294545.1;alternative_source_transcripts=ENST00000724319.1;gene_id=HG002_chrY_G0000725;gene_biotype=lncRNA;gene_name=ENSG00000294545;gene_sources=liftoff;ID=HG002_chrY_G0000725;Name=ENSG00000294545
HG002_chrY	CAT	transcript	26026296	26031386	1000	+	.	source_transcript=ENST00000724319.1;source_transcript_name=ENST00000724319;source_gene=ENSG00000294545.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294545.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724319.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724319.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294545;alternative_source_transcripts=ENST00000724319.1;transcript_id=HG002_chrY_T0001997;gene_id=HG002_chrY_G0000725;Parent=HG002_chrY_G0000725;transcript_name=HG002_chrY_T0001997;gene_name=ENSG00000294545;ID=HG002_chrY_T0001997;Name=ENSG00000294545
HG002_chrY	CAT	exon	26026296	26026392	.	+	.	source_transcript=ENST00000724319.1;source_transcript_name=ENST00000724319;source_gene=ENSG00000294545.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294545.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724319.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724319.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294545;alternative_source_transcripts=ENST00000724319.1;transcript_id=HG002_chrY_T0001997;gene_id=HG002_chrY_G0000725;Parent=HG002_chrY_T0001997;transcript_name=HG002_chrY_T0001997;gene_name=ENSG00000294545;ID=exon:HG002_chrY_T0001997:0;Name=ENSG00000294545;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26026393	26031044	.	+	.	source_transcript=ENST00000724319.1;source_transcript_name=ENST00000724319;source_gene=ENSG00000294545.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294545.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724319.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724319.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294545;alternative_source_transcripts=ENST00000724319.1;transcript_id=HG002_chrY_T0001997;gene_id=HG002_chrY_G0000725;Parent=HG002_chrY_T0001997;transcript_name=HG002_chrY_T0001997;gene_name=ENSG00000294545;ID=intron:HG002_chrY_T0001997:0;Name=ENSG00000294545;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26031045	26031386	.	+	.	source_transcript=ENST00000724319.1;source_transcript_name=ENST00000724319;source_gene=ENSG00000294545.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294545.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724319.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724319.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294545;alternative_source_transcripts=ENST00000724319.1;transcript_id=HG002_chrY_T0001997;gene_id=HG002_chrY_G0000725;Parent=HG002_chrY_T0001997;transcript_name=HG002_chrY_T0001997;gene_name=ENSG00000294545;ID=exon:HG002_chrY_T0001997:1;Name=ENSG00000294545;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26076369	26160950	.	+	.	source_gene_common_name=ENSG00000306715;source_gene=ENSG00000306715.1;alternative_source_transcripts=ENST00000820371.1;gene_id=HG002_chrY_G0000726;gene_biotype=lncRNA;gene_name=ENSG00000306715;gene_sources=liftoff;ID=HG002_chrY_G0000726;Name=ENSG00000306715
HG002_chrY	CAT	transcript	26076369	26160950	1000	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820371.1;transcript_id=HG002_chrY_T0001998;gene_id=HG002_chrY_G0000726;Parent=HG002_chrY_G0000726;transcript_name=HG002_chrY_T0001998;gene_name=ENSG00000306715;ID=HG002_chrY_T0001998;Name=ENSG00000306715
HG002_chrY	CAT	exon	26076369	26076467	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820371.1;transcript_id=HG002_chrY_T0001998;gene_id=HG002_chrY_G0000726;Parent=HG002_chrY_T0001998;transcript_name=HG002_chrY_T0001998;gene_name=ENSG00000306715;ID=exon:HG002_chrY_T0001998:0;Name=ENSG00000306715;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26076468	26088076	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820371.1;transcript_id=HG002_chrY_T0001998;gene_id=HG002_chrY_G0000726;Parent=HG002_chrY_T0001998;transcript_name=HG002_chrY_T0001998;gene_name=ENSG00000306715;ID=intron:HG002_chrY_T0001998:0;Name=ENSG00000306715;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26088077	26088184	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820371.1;transcript_id=HG002_chrY_T0001998;gene_id=HG002_chrY_G0000726;Parent=HG002_chrY_T0001998;transcript_name=HG002_chrY_T0001998;gene_name=ENSG00000306715;ID=exon:HG002_chrY_T0001998:1;Name=ENSG00000306715;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26088185	26102624	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820371.1;transcript_id=HG002_chrY_T0001998;gene_id=HG002_chrY_G0000726;Parent=HG002_chrY_T0001998;transcript_name=HG002_chrY_T0001998;gene_name=ENSG00000306715;ID=intron:HG002_chrY_T0001998:1;Name=ENSG00000306715;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26102625	26102729	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820371.1;transcript_id=HG002_chrY_T0001998;gene_id=HG002_chrY_G0000726;Parent=HG002_chrY_T0001998;transcript_name=HG002_chrY_T0001998;gene_name=ENSG00000306715;ID=exon:HG002_chrY_T0001998:2;Name=ENSG00000306715;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26102730	26160538	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820371.1;transcript_id=HG002_chrY_T0001998;gene_id=HG002_chrY_G0000726;Parent=HG002_chrY_T0001998;transcript_name=HG002_chrY_T0001998;gene_name=ENSG00000306715;ID=intron:HG002_chrY_T0001998:2;Name=ENSG00000306715;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26160539	26160950	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820371.1;transcript_id=HG002_chrY_T0001998;gene_id=HG002_chrY_G0000726;Parent=HG002_chrY_T0001998;transcript_name=HG002_chrY_T0001998;gene_name=ENSG00000306715;ID=exon:HG002_chrY_T0001998:3;Name=ENSG00000306715;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	26076400	26108013	1000	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1;transcript_id=HG002_chrY_T0001999;gene_id=HG002_chrY_G0000726;Parent=HG002_chrY_G0000726;transcript_name=HG002_chrY_T0001999;gene_name=ENSG00000306715;ID=HG002_chrY_T0001999;Name=ENSG00000306715
HG002_chrY	CAT	exon	26076400	26076467	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1;transcript_id=HG002_chrY_T0001999;gene_id=HG002_chrY_G0000726;Parent=HG002_chrY_T0001999;transcript_name=HG002_chrY_T0001999;gene_name=ENSG00000306715;ID=exon:HG002_chrY_T0001999:0;Name=ENSG00000306715;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26076468	26088076	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1;transcript_id=HG002_chrY_T0001999;gene_id=HG002_chrY_G0000726;Parent=HG002_chrY_T0001999;transcript_name=HG002_chrY_T0001999;gene_name=ENSG00000306715;ID=intron:HG002_chrY_T0001999:0;Name=ENSG00000306715;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26088077	26088184	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1;transcript_id=HG002_chrY_T0001999;gene_id=HG002_chrY_G0000726;Parent=HG002_chrY_T0001999;transcript_name=HG002_chrY_T0001999;gene_name=ENSG00000306715;ID=exon:HG002_chrY_T0001999:1;Name=ENSG00000306715;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26088185	26102624	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1;transcript_id=HG002_chrY_T0001999;gene_id=HG002_chrY_G0000726;Parent=HG002_chrY_T0001999;transcript_name=HG002_chrY_T0001999;gene_name=ENSG00000306715;ID=intron:HG002_chrY_T0001999:1;Name=ENSG00000306715;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26102625	26102729	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1;transcript_id=HG002_chrY_T0001999;gene_id=HG002_chrY_G0000726;Parent=HG002_chrY_T0001999;transcript_name=HG002_chrY_T0001999;gene_name=ENSG00000306715;ID=exon:HG002_chrY_T0001999:2;Name=ENSG00000306715;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26102730	26107358	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1;transcript_id=HG002_chrY_T0001999;gene_id=HG002_chrY_G0000726;Parent=HG002_chrY_T0001999;transcript_name=HG002_chrY_T0001999;gene_name=ENSG00000306715;ID=intron:HG002_chrY_T0001999:2;Name=ENSG00000306715;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26107359	26108013	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1;transcript_id=HG002_chrY_T0001999;gene_id=HG002_chrY_G0000726;Parent=HG002_chrY_T0001999;transcript_name=HG002_chrY_T0001999;gene_name=ENSG00000306715;ID=exon:HG002_chrY_T0001999:3;Name=ENSG00000306715;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26078709	26085658	.	+	.	source_gene_common_name=RBMY2YP;source_gene=ENSG00000227633.1;alternative_source_transcripts=ENST00000423333.1;gene_id=HG002_chrY_G0000727;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2YP;gene_sources=liftoff;ID=HG002_chrY_G0000727;Name=RBMY2YP
HG002_chrY	CAT	transcript	26078709	26085658	1000	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=HG002_chrY_T0002000;gene_id=HG002_chrY_G0000727;Parent=HG002_chrY_G0000727;transcript_name=HG002_chrY_T0002000;gene_name=RBMY2YP;ID=HG002_chrY_T0002000;Name=RBMY2YP
HG002_chrY	CAT	exon	26078709	26078821	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=HG002_chrY_T0002000;gene_id=HG002_chrY_G0000727;Parent=HG002_chrY_T0002000;transcript_name=HG002_chrY_T0002000;gene_name=RBMY2YP;ID=exon:HG002_chrY_T0002000:0;Name=RBMY2YP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26078822	26079233	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=HG002_chrY_T0002000;gene_id=HG002_chrY_G0000727;Parent=HG002_chrY_T0002000;transcript_name=HG002_chrY_T0002000;gene_name=RBMY2YP;ID=intron:HG002_chrY_T0002000:0;Name=RBMY2YP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26079234	26079335	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=HG002_chrY_T0002000;gene_id=HG002_chrY_G0000727;Parent=HG002_chrY_T0002000;transcript_name=HG002_chrY_T0002000;gene_name=RBMY2YP;ID=exon:HG002_chrY_T0002000:1;Name=RBMY2YP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26079336	26081723	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=HG002_chrY_T0002000;gene_id=HG002_chrY_G0000727;Parent=HG002_chrY_T0002000;transcript_name=HG002_chrY_T0002000;gene_name=RBMY2YP;ID=intron:HG002_chrY_T0002000:1;Name=RBMY2YP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26081724	26081905	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=HG002_chrY_T0002000;gene_id=HG002_chrY_G0000727;Parent=HG002_chrY_T0002000;transcript_name=HG002_chrY_T0002000;gene_name=RBMY2YP;ID=exon:HG002_chrY_T0002000:2;Name=RBMY2YP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26081906	26084649	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=HG002_chrY_T0002000;gene_id=HG002_chrY_G0000727;Parent=HG002_chrY_T0002000;transcript_name=HG002_chrY_T0002000;gene_name=RBMY2YP;ID=intron:HG002_chrY_T0002000:2;Name=RBMY2YP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26084650	26084760	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=HG002_chrY_T0002000;gene_id=HG002_chrY_G0000727;Parent=HG002_chrY_T0002000;transcript_name=HG002_chrY_T0002000;gene_name=RBMY2YP;ID=exon:HG002_chrY_T0002000:3;Name=RBMY2YP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26084761	26084841	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=HG002_chrY_T0002000;gene_id=HG002_chrY_G0000727;Parent=HG002_chrY_T0002000;transcript_name=HG002_chrY_T0002000;gene_name=RBMY2YP;ID=intron:HG002_chrY_T0002000:3;Name=RBMY2YP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26084842	26084930	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=HG002_chrY_T0002000;gene_id=HG002_chrY_G0000727;Parent=HG002_chrY_T0002000;transcript_name=HG002_chrY_T0002000;gene_name=RBMY2YP;ID=exon:HG002_chrY_T0002000:4;Name=RBMY2YP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26084931	26085343	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=HG002_chrY_T0002000;gene_id=HG002_chrY_G0000727;Parent=HG002_chrY_T0002000;transcript_name=HG002_chrY_T0002000;gene_name=RBMY2YP;ID=intron:HG002_chrY_T0002000:4;Name=RBMY2YP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26085344	26085658	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=HG002_chrY_T0002000;gene_id=HG002_chrY_G0000727;Parent=HG002_chrY_T0002000;transcript_name=HG002_chrY_T0002000;gene_name=RBMY2YP;ID=exon:HG002_chrY_T0002000:5;Name=RBMY2YP;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26119861	26119935	.	+	.	source_gene_common_name=ENSG00000279115;source_gene=ENSG00000279115.2;alternative_source_transcripts=ENST00000624491.2;gene_id=HG002_chrY_G0000728;gene_biotype=processed_pseudogene;gene_name=ENSG00000279115;gene_sources=liftoff;ID=HG002_chrY_G0000728;Name=ENSG00000279115
HG002_chrY	CAT	transcript	26119861	26119935	1000	+	.	source_transcript=ENST00000624491.2;source_transcript_name=ENST00000624491;source_gene=ENSG00000279115.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000279115.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000624491.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624491.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000279115;alternative_source_transcripts=ENST00000624491.2;transcript_id=HG002_chrY_T0002001;gene_id=HG002_chrY_G0000728;Parent=HG002_chrY_G0000728;transcript_name=HG002_chrY_T0002001;gene_name=ENSG00000279115;ID=HG002_chrY_T0002001;Name=ENSG00000279115
HG002_chrY	CAT	exon	26119861	26119935	.	+	.	source_transcript=ENST00000624491.2;source_transcript_name=ENST00000624491;source_gene=ENSG00000279115.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000279115.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000624491.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624491.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000279115;alternative_source_transcripts=ENST00000624491.2;transcript_id=HG002_chrY_T0002001;gene_id=HG002_chrY_G0000728;Parent=HG002_chrY_T0002001;transcript_name=HG002_chrY_T0002001;gene_name=ENSG00000279115;ID=exon:HG002_chrY_T0002001:0;Name=ENSG00000279115;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26189657	26206824	.	-	.	source_gene_common_name=ENSG00000293927;source_gene=ENSG00000293927.1;gene_id=HG002_chrY_G0000729;gene_biotype=lncRNA;gene_name=ENSG00000293927;gene_sources=liftoff;ID=HG002_chrY_G0000729;Name=ENSG00000293927
HG002_chrY	CAT	transcript	26189657	26206824	1000	-	.	source_transcript=ENST00000719987.1;source_transcript_name=ENST00000719987;source_gene=ENSG00000293927.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293927.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000719987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000719987.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293927;transcript_id=HG002_chrY_T0002002;gene_id=HG002_chrY_G0000729;Parent=HG002_chrY_G0000729;transcript_name=HG002_chrY_T0002002;gene_name=ENSG00000293927;ID=HG002_chrY_T0002002;Name=ENSG00000293927
HG002_chrY	CAT	exon	26189657	26190979	.	-	.	source_transcript=ENST00000719987.1;source_transcript_name=ENST00000719987;source_gene=ENSG00000293927.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293927.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000719987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000719987.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293927;transcript_id=HG002_chrY_T0002002;gene_id=HG002_chrY_G0000729;Parent=HG002_chrY_T0002002;transcript_name=HG002_chrY_T0002002;gene_name=ENSG00000293927;ID=exon:HG002_chrY_T0002002:0;Name=ENSG00000293927;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26190980	26199015	.	-	.	source_transcript=ENST00000719987.1;source_transcript_name=ENST00000719987;source_gene=ENSG00000293927.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293927.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000719987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000719987.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293927;transcript_id=HG002_chrY_T0002002;gene_id=HG002_chrY_G0000729;Parent=HG002_chrY_T0002002;transcript_name=HG002_chrY_T0002002;gene_name=ENSG00000293927;ID=intron:HG002_chrY_T0002002:0;Name=ENSG00000293927;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26199016	26199184	.	-	.	source_transcript=ENST00000719987.1;source_transcript_name=ENST00000719987;source_gene=ENSG00000293927.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293927.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000719987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000719987.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293927;transcript_id=HG002_chrY_T0002002;gene_id=HG002_chrY_G0000729;Parent=HG002_chrY_T0002002;transcript_name=HG002_chrY_T0002002;gene_name=ENSG00000293927;ID=exon:HG002_chrY_T0002002:1;Name=ENSG00000293927;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26199185	26206725	.	-	.	source_transcript=ENST00000719987.1;source_transcript_name=ENST00000719987;source_gene=ENSG00000293927.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293927.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000719987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000719987.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293927;transcript_id=HG002_chrY_T0002002;gene_id=HG002_chrY_G0000729;Parent=HG002_chrY_T0002002;transcript_name=HG002_chrY_T0002002;gene_name=ENSG00000293927;ID=intron:HG002_chrY_T0002002:1;Name=ENSG00000293927;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26206726	26206824	.	-	.	source_transcript=ENST00000719987.1;source_transcript_name=ENST00000719987;source_gene=ENSG00000293927.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293927.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000719987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000719987.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293927;transcript_id=HG002_chrY_T0002002;gene_id=HG002_chrY_G0000729;Parent=HG002_chrY_T0002002;transcript_name=HG002_chrY_T0002002;gene_name=ENSG00000293927;ID=exon:HG002_chrY_T0002002:2;Name=ENSG00000293927;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26199016	26199184	.	-	.	source_gene_common_name=SEPTIN14P22;source_gene=ENSG00000248792.2;gene_id=HG002_chrY_G0000730;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=SEPTIN14P22;gene_sources=liftoff;ID=HG002_chrY_G0000730;Name=SEPTIN14P22
HG002_chrY	CAT	transcript	26199016	26199184	1000	-	.	source_transcript=ENST00000509776.2;source_transcript_name=SEPTIN14P22-201;source_gene=ENSG00000248792.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000248792.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000509776.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000509776.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P22;transcript_id=HG002_chrY_T0002003;gene_id=HG002_chrY_G0000730;Parent=HG002_chrY_G0000730;transcript_name=HG002_chrY_T0002003;gene_name=SEPTIN14P22;ID=HG002_chrY_T0002003;Name=SEPTIN14P22
HG002_chrY	CAT	exon	26199016	26199184	.	-	.	source_transcript=ENST00000509776.2;source_transcript_name=SEPTIN14P22-201;source_gene=ENSG00000248792.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000248792.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000509776.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000509776.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P22;transcript_id=HG002_chrY_T0002003;gene_id=HG002_chrY_G0000730;Parent=HG002_chrY_T0002003;transcript_name=HG002_chrY_T0002003;gene_name=SEPTIN14P22;ID=exon:HG002_chrY_T0002003:0;Name=SEPTIN14P22;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26201105	26203909	.	+	.	source_gene_common_name=CICP2;source_gene=ENSG00000233740.1;gene_id=HG002_chrY_G0000731;gene_biotype=processed_pseudogene;gene_name=CICP2;gene_sources=liftoff;ID=HG002_chrY_G0000731;Name=CICP2
HG002_chrY	CAT	transcript	26201105	26203909	1000	+	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420675.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=HG002_chrY_T0002004;gene_id=HG002_chrY_G0000731;Parent=HG002_chrY_G0000731;transcript_name=HG002_chrY_T0002004;gene_name=CICP2;ID=HG002_chrY_T0002004;Name=CICP2
HG002_chrY	CAT	exon	26201105	26202884	.	+	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=HG002_chrY_T0002004;gene_id=HG002_chrY_G0000731;Parent=HG002_chrY_T0002004;transcript_name=HG002_chrY_T0002004;gene_name=CICP2;ID=exon:HG002_chrY_T0002004:0;Name=CICP2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26202885	26202950	.	+	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=HG002_chrY_T0002004;gene_id=HG002_chrY_G0000731;Parent=HG002_chrY_T0002004;transcript_name=HG002_chrY_T0002004;gene_name=CICP2;ID=intron:HG002_chrY_T0002004:0;Name=CICP2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26202951	26203372	.	+	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=HG002_chrY_T0002004;gene_id=HG002_chrY_G0000731;Parent=HG002_chrY_T0002004;transcript_name=HG002_chrY_T0002004;gene_name=CICP2;ID=exon:HG002_chrY_T0002004:1;Name=CICP2;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26203373	26203782	.	+	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=HG002_chrY_T0002004;gene_id=HG002_chrY_G0000731;Parent=HG002_chrY_T0002004;transcript_name=HG002_chrY_T0002004;gene_name=CICP2;ID=intron:HG002_chrY_T0002004:1;Name=CICP2;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26203783	26203909	.	+	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=HG002_chrY_T0002004;gene_id=HG002_chrY_G0000731;Parent=HG002_chrY_T0002004;transcript_name=HG002_chrY_T0002004;gene_name=CICP2;ID=exon:HG002_chrY_T0002004:2;Name=CICP2;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26205221	26206002	.	-	.	source_gene_common_name=LINC00265-2P;source_gene=ENSG00000224827.1;gene_id=HG002_chrY_G0000732;gene_biotype=processed_pseudogene;gene_name=LINC00265-2P;gene_sources=liftoff;ID=HG002_chrY_G0000732;Name=LINC00265-2P
HG002_chrY	CAT	transcript	26205221	26206002	1000	-	.	source_transcript=ENST00000413372.1;source_transcript_name=LINC00265-2P-201;source_gene=ENSG00000224827.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224827.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413372.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00265-2P;transcript_id=HG002_chrY_T0002005;gene_id=HG002_chrY_G0000732;Parent=HG002_chrY_G0000732;transcript_name=HG002_chrY_T0002005;gene_name=LINC00265-2P;ID=HG002_chrY_T0002005;Name=LINC00265-2P
HG002_chrY	CAT	exon	26205221	26206002	.	-	.	source_transcript=ENST00000413372.1;source_transcript_name=LINC00265-2P-201;source_gene=ENSG00000224827.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224827.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00265-2P;transcript_id=HG002_chrY_T0002005;gene_id=HG002_chrY_G0000732;Parent=HG002_chrY_T0002005;transcript_name=HG002_chrY_T0002005;gene_name=LINC00265-2P;ID=exon:HG002_chrY_T0002005:0;Name=LINC00265-2P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26205253	26206156	.	-	.	source_gene_common_name=LINC00265-3P;source_gene=ENSG00000233944.1;gene_id=HG002_chrY_G0000733;gene_biotype=processed_pseudogene;gene_name=LINC00265-3P;gene_sources=transMap_pairwise;ID=HG002_chrY_G0000733;Name=LINC00265-3P
HG002_chrY	CAT	transcript	26205253	26206156	1000	-	.	source_transcript=ENST00000447588.1;source_transcript_name=LINC00265-3P-201;source_gene=ENSG00000233944.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233944.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000447588.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000447588.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00265-3P;transcript_id=HG002_chrY_T0002006;gene_id=HG002_chrY_G0000733;Parent=HG002_chrY_G0000733;transcript_name=HG002_chrY_T0002006;gene_name=LINC00265-3P;ID=HG002_chrY_T0002006;Name=LINC00265-3P
HG002_chrY	CAT	exon	26205253	26206156	.	-	.	source_transcript=ENST00000447588.1;source_transcript_name=LINC00265-3P-201;source_gene=ENSG00000233944.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233944.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000447588.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000447588.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00265-3P;transcript_id=HG002_chrY_T0002006;gene_id=HG002_chrY_G0000733;Parent=HG002_chrY_T0002006;transcript_name=HG002_chrY_T0002006;gene_name=LINC00265-3P;ID=exon:HG002_chrY_T0002006:0;Name=LINC00265-3P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26243256	26249414	.	+	.	source_gene_common_name=UBE2Q2P4Y;source_gene=ENSG00000225491.1;alternative_source_transcripts=ENST00000413867.1;gene_id=HG002_chrY_G0000734;gene_biotype=unprocessed_pseudogene;gene_name=UBE2Q2P4Y;gene_sources=liftoff;ID=HG002_chrY_G0000734;Name=UBE2Q2P4Y
HG002_chrY	CAT	transcript	26243256	26249414	1000	+	.	source_transcript=ENST00000433767.1;source_transcript_name=UBE2Q2P4Y-201;source_gene=ENSG00000225491.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225491.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433767.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P4Y;alternative_source_transcripts=ENST00000413867.1;transcript_id=HG002_chrY_T0002007;gene_id=HG002_chrY_G0000734;Parent=HG002_chrY_G0000734;transcript_name=HG002_chrY_T0002007;gene_name=UBE2Q2P4Y;ID=HG002_chrY_T0002007;Name=UBE2Q2P4Y
HG002_chrY	CAT	exon	26243256	26243357	.	+	.	source_transcript=ENST00000433767.1;source_transcript_name=UBE2Q2P4Y-201;source_gene=ENSG00000225491.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225491.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P4Y;alternative_source_transcripts=ENST00000413867.1;transcript_id=HG002_chrY_T0002007;gene_id=HG002_chrY_G0000734;Parent=HG002_chrY_T0002007;transcript_name=HG002_chrY_T0002007;gene_name=UBE2Q2P4Y;ID=exon:HG002_chrY_T0002007:0;Name=UBE2Q2P4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26243358	26249309	.	+	.	source_transcript=ENST00000433767.1;source_transcript_name=UBE2Q2P4Y-201;source_gene=ENSG00000225491.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225491.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P4Y;alternative_source_transcripts=ENST00000413867.1;transcript_id=HG002_chrY_T0002007;gene_id=HG002_chrY_G0000734;Parent=HG002_chrY_T0002007;transcript_name=HG002_chrY_T0002007;gene_name=UBE2Q2P4Y;ID=intron:HG002_chrY_T0002007:0;Name=UBE2Q2P4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26249310	26249414	.	+	.	source_transcript=ENST00000433767.1;source_transcript_name=UBE2Q2P4Y-201;source_gene=ENSG00000225491.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225491.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P4Y;alternative_source_transcripts=ENST00000413867.1;transcript_id=HG002_chrY_T0002007;gene_id=HG002_chrY_G0000734;Parent=HG002_chrY_T0002007;transcript_name=HG002_chrY_T0002007;gene_name=UBE2Q2P4Y;ID=exon:HG002_chrY_T0002007:1;Name=UBE2Q2P4Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26266660	26272674	.	+	.	source_gene_common_name=GOLGA2P2Y;source_gene=ENSG00000239533.7;gene_id=HG002_chrY_G0000735;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=GOLGA2P2Y;gene_sources=liftoff;ID=HG002_chrY_G0000735;Name=GOLGA2P2Y
HG002_chrY	CAT	transcript	26266660	26272674	1000	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002008;gene_id=HG002_chrY_G0000735;Parent=HG002_chrY_G0000735;transcript_name=HG002_chrY_T0002008;gene_name=GOLGA2P2Y;ID=HG002_chrY_T0002008;Name=GOLGA2P2Y
HG002_chrY	CAT	exon	26266660	26266779	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002008;gene_id=HG002_chrY_G0000735;Parent=HG002_chrY_T0002008;transcript_name=HG002_chrY_T0002008;gene_name=GOLGA2P2Y;ID=exon:HG002_chrY_T0002008:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26266780	26267392	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002008;gene_id=HG002_chrY_G0000735;Parent=HG002_chrY_T0002008;transcript_name=HG002_chrY_T0002008;gene_name=GOLGA2P2Y;ID=intron:HG002_chrY_T0002008:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26267393	26267452	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002008;gene_id=HG002_chrY_G0000735;Parent=HG002_chrY_T0002008;transcript_name=HG002_chrY_T0002008;gene_name=GOLGA2P2Y;ID=exon:HG002_chrY_T0002008:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26267453	26267636	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002008;gene_id=HG002_chrY_G0000735;Parent=HG002_chrY_T0002008;transcript_name=HG002_chrY_T0002008;gene_name=GOLGA2P2Y;ID=intron:HG002_chrY_T0002008:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26267637	26267717	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002008;gene_id=HG002_chrY_G0000735;Parent=HG002_chrY_T0002008;transcript_name=HG002_chrY_T0002008;gene_name=GOLGA2P2Y;ID=exon:HG002_chrY_T0002008:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26267718	26268358	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002008;gene_id=HG002_chrY_G0000735;Parent=HG002_chrY_T0002008;transcript_name=HG002_chrY_T0002008;gene_name=GOLGA2P2Y;ID=intron:HG002_chrY_T0002008:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26268359	26268448	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002008;gene_id=HG002_chrY_G0000735;Parent=HG002_chrY_T0002008;transcript_name=HG002_chrY_T0002008;gene_name=GOLGA2P2Y;ID=exon:HG002_chrY_T0002008:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26268449	26268835	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002008;gene_id=HG002_chrY_G0000735;Parent=HG002_chrY_T0002008;transcript_name=HG002_chrY_T0002008;gene_name=GOLGA2P2Y;ID=intron:HG002_chrY_T0002008:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26268836	26269186	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002008;gene_id=HG002_chrY_G0000735;Parent=HG002_chrY_T0002008;transcript_name=HG002_chrY_T0002008;gene_name=GOLGA2P2Y;ID=exon:HG002_chrY_T0002008:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26269187	26269484	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002008;gene_id=HG002_chrY_G0000735;Parent=HG002_chrY_T0002008;transcript_name=HG002_chrY_T0002008;gene_name=GOLGA2P2Y;ID=intron:HG002_chrY_T0002008:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26269485	26269542	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002008;gene_id=HG002_chrY_G0000735;Parent=HG002_chrY_T0002008;transcript_name=HG002_chrY_T0002008;gene_name=GOLGA2P2Y;ID=exon:HG002_chrY_T0002008:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26269543	26270898	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002008;gene_id=HG002_chrY_G0000735;Parent=HG002_chrY_T0002008;transcript_name=HG002_chrY_T0002008;gene_name=GOLGA2P2Y;ID=intron:HG002_chrY_T0002008:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26270899	26270973	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002008;gene_id=HG002_chrY_G0000735;Parent=HG002_chrY_T0002008;transcript_name=HG002_chrY_T0002008;gene_name=GOLGA2P2Y;ID=exon:HG002_chrY_T0002008:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26270974	26271393	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002008;gene_id=HG002_chrY_G0000735;Parent=HG002_chrY_T0002008;transcript_name=HG002_chrY_T0002008;gene_name=GOLGA2P2Y;ID=intron:HG002_chrY_T0002008:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26271394	26271482	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002008;gene_id=HG002_chrY_G0000735;Parent=HG002_chrY_T0002008;transcript_name=HG002_chrY_T0002008;gene_name=GOLGA2P2Y;ID=exon:HG002_chrY_T0002008:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26271483	26271737	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002008;gene_id=HG002_chrY_G0000735;Parent=HG002_chrY_T0002008;transcript_name=HG002_chrY_T0002008;gene_name=GOLGA2P2Y;ID=intron:HG002_chrY_T0002008:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26271738	26271926	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002008;gene_id=HG002_chrY_G0000735;Parent=HG002_chrY_T0002008;transcript_name=HG002_chrY_T0002008;gene_name=GOLGA2P2Y;ID=exon:HG002_chrY_T0002008:8;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26271927	26272015	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002008;gene_id=HG002_chrY_G0000735;Parent=HG002_chrY_T0002008;transcript_name=HG002_chrY_T0002008;gene_name=GOLGA2P2Y;ID=intron:HG002_chrY_T0002008:8;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26272016	26272108	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002008;gene_id=HG002_chrY_G0000735;Parent=HG002_chrY_T0002008;transcript_name=HG002_chrY_T0002008;gene_name=GOLGA2P2Y;ID=exon:HG002_chrY_T0002008:9;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26272109	26272190	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002008;gene_id=HG002_chrY_G0000735;Parent=HG002_chrY_T0002008;transcript_name=HG002_chrY_T0002008;gene_name=GOLGA2P2Y;ID=intron:HG002_chrY_T0002008:9;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26272191	26272286	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002008;gene_id=HG002_chrY_G0000735;Parent=HG002_chrY_T0002008;transcript_name=HG002_chrY_T0002008;gene_name=GOLGA2P2Y;ID=exon:HG002_chrY_T0002008:10;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26272287	26272369	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002008;gene_id=HG002_chrY_G0000735;Parent=HG002_chrY_T0002008;transcript_name=HG002_chrY_T0002008;gene_name=GOLGA2P2Y;ID=intron:HG002_chrY_T0002008:10;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26272370	26272516	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002008;gene_id=HG002_chrY_G0000735;Parent=HG002_chrY_T0002008;transcript_name=HG002_chrY_T0002008;gene_name=GOLGA2P2Y;ID=exon:HG002_chrY_T0002008:11;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26272517	26272617	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002008;gene_id=HG002_chrY_G0000735;Parent=HG002_chrY_T0002008;transcript_name=HG002_chrY_T0002008;gene_name=GOLGA2P2Y;ID=intron:HG002_chrY_T0002008:11;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26272618	26272674	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002008;gene_id=HG002_chrY_G0000735;Parent=HG002_chrY_T0002008;transcript_name=HG002_chrY_T0002008;gene_name=GOLGA2P2Y;ID=exon:HG002_chrY_T0002008:12;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26267410	26272274	.	+	.	source_gene_common_name=GOLGA2P2Y;source_gene=ENSG00000291016.1;gene_id=HG002_chrY_G0000736;gene_biotype=lncRNA;gene_name=GOLGA2P2Y;gene_sources=liftoff;ID=HG002_chrY_G0000736;Name=GOLGA2P2Y
HG002_chrY	CAT	transcript	26267410	26272274	1000	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002009;gene_id=HG002_chrY_G0000736;Parent=HG002_chrY_G0000736;transcript_name=HG002_chrY_T0002009;gene_name=GOLGA2P2Y;ID=HG002_chrY_T0002009;Name=GOLGA2P2Y
HG002_chrY	CAT	exon	26267410	26267452	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002009;gene_id=HG002_chrY_G0000736;Parent=HG002_chrY_T0002009;transcript_name=HG002_chrY_T0002009;gene_name=GOLGA2P2Y;ID=exon:HG002_chrY_T0002009:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26267453	26267638	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002009;gene_id=HG002_chrY_G0000736;Parent=HG002_chrY_T0002009;transcript_name=HG002_chrY_T0002009;gene_name=GOLGA2P2Y;ID=intron:HG002_chrY_T0002009:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26267639	26267717	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002009;gene_id=HG002_chrY_G0000736;Parent=HG002_chrY_T0002009;transcript_name=HG002_chrY_T0002009;gene_name=GOLGA2P2Y;ID=exon:HG002_chrY_T0002009:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26267718	26268836	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002009;gene_id=HG002_chrY_G0000736;Parent=HG002_chrY_T0002009;transcript_name=HG002_chrY_T0002009;gene_name=GOLGA2P2Y;ID=intron:HG002_chrY_T0002009:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26268837	26269186	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002009;gene_id=HG002_chrY_G0000736;Parent=HG002_chrY_T0002009;transcript_name=HG002_chrY_T0002009;gene_name=GOLGA2P2Y;ID=exon:HG002_chrY_T0002009:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26269187	26269484	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002009;gene_id=HG002_chrY_G0000736;Parent=HG002_chrY_T0002009;transcript_name=HG002_chrY_T0002009;gene_name=GOLGA2P2Y;ID=intron:HG002_chrY_T0002009:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26269485	26269542	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002009;gene_id=HG002_chrY_G0000736;Parent=HG002_chrY_T0002009;transcript_name=HG002_chrY_T0002009;gene_name=GOLGA2P2Y;ID=exon:HG002_chrY_T0002009:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26269543	26270898	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002009;gene_id=HG002_chrY_G0000736;Parent=HG002_chrY_T0002009;transcript_name=HG002_chrY_T0002009;gene_name=GOLGA2P2Y;ID=intron:HG002_chrY_T0002009:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26270899	26270973	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002009;gene_id=HG002_chrY_G0000736;Parent=HG002_chrY_T0002009;transcript_name=HG002_chrY_T0002009;gene_name=GOLGA2P2Y;ID=exon:HG002_chrY_T0002009:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26270974	26271393	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002009;gene_id=HG002_chrY_G0000736;Parent=HG002_chrY_T0002009;transcript_name=HG002_chrY_T0002009;gene_name=GOLGA2P2Y;ID=intron:HG002_chrY_T0002009:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26271394	26271482	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002009;gene_id=HG002_chrY_G0000736;Parent=HG002_chrY_T0002009;transcript_name=HG002_chrY_T0002009;gene_name=GOLGA2P2Y;ID=exon:HG002_chrY_T0002009:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26271483	26271737	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002009;gene_id=HG002_chrY_G0000736;Parent=HG002_chrY_T0002009;transcript_name=HG002_chrY_T0002009;gene_name=GOLGA2P2Y;ID=intron:HG002_chrY_T0002009:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26271738	26271926	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002009;gene_id=HG002_chrY_G0000736;Parent=HG002_chrY_T0002009;transcript_name=HG002_chrY_T0002009;gene_name=GOLGA2P2Y;ID=exon:HG002_chrY_T0002009:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26271927	26272015	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002009;gene_id=HG002_chrY_G0000736;Parent=HG002_chrY_T0002009;transcript_name=HG002_chrY_T0002009;gene_name=GOLGA2P2Y;ID=intron:HG002_chrY_T0002009:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26272016	26272108	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002009;gene_id=HG002_chrY_G0000736;Parent=HG002_chrY_T0002009;transcript_name=HG002_chrY_T0002009;gene_name=GOLGA2P2Y;ID=exon:HG002_chrY_T0002009:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26272109	26272190	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002009;gene_id=HG002_chrY_G0000736;Parent=HG002_chrY_T0002009;transcript_name=HG002_chrY_T0002009;gene_name=GOLGA2P2Y;ID=intron:HG002_chrY_T0002009:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26272191	26272274	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG002_chrY_T0002009;gene_id=HG002_chrY_G0000736;Parent=HG002_chrY_T0002009;transcript_name=HG002_chrY_T0002009;gene_name=GOLGA2P2Y;ID=exon:HG002_chrY_T0002009:8;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26271025	26271283	.	+	.	source_gene_common_name=RN7SL818P;source_gene=ENSG00000274234.1;alternative_source_transcripts=ENST00000606439.2;gene_id=HG002_chrY_G0000737;gene_biotype=misc_RNA;gene_name=RN7SL818P;gene_sources=liftoff;ID=HG002_chrY_G0000737;Name=RN7SL818P
HG002_chrY	CAT	transcript	26271025	26271283	1000	+	.	source_transcript=ENST00000485099.3;source_transcript_name=RN7SL818P-201;source_gene=ENSG00000274234.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000274234.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000485099.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000485099.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SL818P;alternative_source_transcripts=ENST00000606439.2;transcript_id=HG002_chrY_T0002010;gene_id=HG002_chrY_G0000737;Parent=HG002_chrY_G0000737;transcript_name=HG002_chrY_T0002010;gene_name=RN7SL818P;ID=HG002_chrY_T0002010;Name=RN7SL818P
HG002_chrY	CAT	exon	26271025	26271283	.	+	.	source_transcript=ENST00000485099.3;source_transcript_name=RN7SL818P-201;source_gene=ENSG00000274234.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000274234.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000485099.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000485099.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SL818P;alternative_source_transcripts=ENST00000606439.2;transcript_id=HG002_chrY_T0002010;gene_id=HG002_chrY_G0000737;Parent=HG002_chrY_T0002010;transcript_name=HG002_chrY_T0002010;gene_name=RN7SL818P;ID=exon:HG002_chrY_T0002010:0;Name=RN7SL818P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26276111	26285730	.	+	.	source_gene_common_name=ENSG00000284380;source_gene=ENSG00000284380.1;gene_id=HG002_chrY_G0000738;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000284380;gene_sources=liftoff;ID=HG002_chrY_G0000738;Name=ENSG00000284380
HG002_chrY	CAT	transcript	26276111	26285730	1000	+	.	source_transcript=ENST00000623198.2;source_transcript_name=ENST00000623198;source_gene=ENSG00000284380.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284380.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000623198.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000623198.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284380;transcript_id=HG002_chrY_T0002011;gene_id=HG002_chrY_G0000738;Parent=HG002_chrY_G0000738;transcript_name=HG002_chrY_T0002011;gene_name=ENSG00000284380;ID=HG002_chrY_T0002011;Name=ENSG00000284380
HG002_chrY	CAT	exon	26276111	26276195	.	+	.	source_transcript=ENST00000623198.2;source_transcript_name=ENST00000623198;source_gene=ENSG00000284380.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284380.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000623198.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000623198.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284380;transcript_id=HG002_chrY_T0002011;gene_id=HG002_chrY_G0000738;Parent=HG002_chrY_T0002011;transcript_name=HG002_chrY_T0002011;gene_name=ENSG00000284380;ID=exon:HG002_chrY_T0002011:0;Name=ENSG00000284380;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26276196	26277616	.	+	.	source_transcript=ENST00000623198.2;source_transcript_name=ENST00000623198;source_gene=ENSG00000284380.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284380.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000623198.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000623198.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284380;transcript_id=HG002_chrY_T0002011;gene_id=HG002_chrY_G0000738;Parent=HG002_chrY_T0002011;transcript_name=HG002_chrY_T0002011;gene_name=ENSG00000284380;ID=intron:HG002_chrY_T0002011:0;Name=ENSG00000284380;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26277617	26277766	.	+	.	source_transcript=ENST00000623198.2;source_transcript_name=ENST00000623198;source_gene=ENSG00000284380.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284380.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000623198.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000623198.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284380;transcript_id=HG002_chrY_T0002011;gene_id=HG002_chrY_G0000738;Parent=HG002_chrY_T0002011;transcript_name=HG002_chrY_T0002011;gene_name=ENSG00000284380;ID=exon:HG002_chrY_T0002011:1;Name=ENSG00000284380;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26277767	26285568	.	+	.	source_transcript=ENST00000623198.2;source_transcript_name=ENST00000623198;source_gene=ENSG00000284380.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284380.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000623198.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000623198.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284380;transcript_id=HG002_chrY_T0002011;gene_id=HG002_chrY_G0000738;Parent=HG002_chrY_T0002011;transcript_name=HG002_chrY_T0002011;gene_name=ENSG00000284380;ID=intron:HG002_chrY_T0002011:1;Name=ENSG00000284380;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26285569	26285730	.	+	.	source_transcript=ENST00000623198.2;source_transcript_name=ENST00000623198;source_gene=ENSG00000284380.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284380.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000623198.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000623198.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284380;transcript_id=HG002_chrY_T0002011;gene_id=HG002_chrY_G0000738;Parent=HG002_chrY_T0002011;transcript_name=HG002_chrY_T0002011;gene_name=ENSG00000284380;ID=exon:HG002_chrY_T0002011:2;Name=ENSG00000284380;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26276203	26285789	.	+	.	source_gene_common_name=ENSG00000310249;source_gene=ENSG00000310249.1;gene_id=HG002_chrY_G0000739;gene_biotype=lncRNA;gene_name=ENSG00000310249;gene_sources=liftoff;ID=HG002_chrY_G0000739;Name=ENSG00000310249
HG002_chrY	CAT	transcript	26276203	26285789	1000	+	.	source_transcript=ENST00000848543.1;source_transcript_name=ENST00000848543;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848543.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG002_chrY_T0002012;gene_id=HG002_chrY_G0000739;Parent=HG002_chrY_G0000739;transcript_name=HG002_chrY_T0002012;gene_name=ENSG00000310249;ID=HG002_chrY_T0002012;Name=ENSG00000310249
HG002_chrY	CAT	exon	26276203	26276570	.	+	.	source_transcript=ENST00000848543.1;source_transcript_name=ENST00000848543;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848543.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG002_chrY_T0002012;gene_id=HG002_chrY_G0000739;Parent=HG002_chrY_T0002012;transcript_name=HG002_chrY_T0002012;gene_name=ENSG00000310249;ID=exon:HG002_chrY_T0002012:0;Name=ENSG00000310249;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26276571	26277616	.	+	.	source_transcript=ENST00000848543.1;source_transcript_name=ENST00000848543;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848543.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG002_chrY_T0002012;gene_id=HG002_chrY_G0000739;Parent=HG002_chrY_T0002012;transcript_name=HG002_chrY_T0002012;gene_name=ENSG00000310249;ID=intron:HG002_chrY_T0002012:0;Name=ENSG00000310249;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26277617	26277766	.	+	.	source_transcript=ENST00000848543.1;source_transcript_name=ENST00000848543;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848543.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG002_chrY_T0002012;gene_id=HG002_chrY_G0000739;Parent=HG002_chrY_T0002012;transcript_name=HG002_chrY_T0002012;gene_name=ENSG00000310249;ID=exon:HG002_chrY_T0002012:1;Name=ENSG00000310249;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26277767	26285568	.	+	.	source_transcript=ENST00000848543.1;source_transcript_name=ENST00000848543;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848543.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG002_chrY_T0002012;gene_id=HG002_chrY_G0000739;Parent=HG002_chrY_T0002012;transcript_name=HG002_chrY_T0002012;gene_name=ENSG00000310249;ID=intron:HG002_chrY_T0002012:1;Name=ENSG00000310249;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26285569	26285789	.	+	.	source_transcript=ENST00000848543.1;source_transcript_name=ENST00000848543;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848543.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG002_chrY_T0002012;gene_id=HG002_chrY_G0000739;Parent=HG002_chrY_T0002012;transcript_name=HG002_chrY_T0002012;gene_name=ENSG00000310249;ID=exon:HG002_chrY_T0002012:2;Name=ENSG00000310249;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	26276459	26285789	1000	+	.	source_transcript=ENST00000848544.1;source_transcript_name=ENST00000848544;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848544.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG002_chrY_T0002013;gene_id=HG002_chrY_G0000739;Parent=HG002_chrY_G0000739;transcript_name=HG002_chrY_T0002013;gene_name=ENSG00000310249;ID=HG002_chrY_T0002013;Name=ENSG00000310249
HG002_chrY	CAT	exon	26276459	26276570	.	+	.	source_transcript=ENST00000848544.1;source_transcript_name=ENST00000848544;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG002_chrY_T0002013;gene_id=HG002_chrY_G0000739;Parent=HG002_chrY_T0002013;transcript_name=HG002_chrY_T0002013;gene_name=ENSG00000310249;ID=exon:HG002_chrY_T0002013:0;Name=ENSG00000310249;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26276571	26277587	.	+	.	source_transcript=ENST00000848544.1;source_transcript_name=ENST00000848544;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG002_chrY_T0002013;gene_id=HG002_chrY_G0000739;Parent=HG002_chrY_T0002013;transcript_name=HG002_chrY_T0002013;gene_name=ENSG00000310249;ID=intron:HG002_chrY_T0002013:0;Name=ENSG00000310249;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26277588	26277766	.	+	.	source_transcript=ENST00000848544.1;source_transcript_name=ENST00000848544;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG002_chrY_T0002013;gene_id=HG002_chrY_G0000739;Parent=HG002_chrY_T0002013;transcript_name=HG002_chrY_T0002013;gene_name=ENSG00000310249;ID=exon:HG002_chrY_T0002013:1;Name=ENSG00000310249;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26277767	26285568	.	+	.	source_transcript=ENST00000848544.1;source_transcript_name=ENST00000848544;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG002_chrY_T0002013;gene_id=HG002_chrY_G0000739;Parent=HG002_chrY_T0002013;transcript_name=HG002_chrY_T0002013;gene_name=ENSG00000310249;ID=intron:HG002_chrY_T0002013:1;Name=ENSG00000310249;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26285569	26285789	.	+	.	source_transcript=ENST00000848544.1;source_transcript_name=ENST00000848544;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG002_chrY_T0002013;gene_id=HG002_chrY_G0000739;Parent=HG002_chrY_T0002013;transcript_name=HG002_chrY_T0002013;gene_name=ENSG00000310249;ID=exon:HG002_chrY_T0002013:2;Name=ENSG00000310249;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	26277587	26285668	1000	+	.	source_transcript=ENST00000848545.1;source_transcript_name=ENST00000848545;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848545.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848545.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG002_chrY_T0002014;gene_id=HG002_chrY_G0000739;Parent=HG002_chrY_G0000739;transcript_name=HG002_chrY_T0002014;gene_name=ENSG00000310249;ID=HG002_chrY_T0002014;Name=ENSG00000310249
HG002_chrY	CAT	exon	26277587	26277766	.	+	.	source_transcript=ENST00000848545.1;source_transcript_name=ENST00000848545;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848545.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848545.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG002_chrY_T0002014;gene_id=HG002_chrY_G0000739;Parent=HG002_chrY_T0002014;transcript_name=HG002_chrY_T0002014;gene_name=ENSG00000310249;ID=exon:HG002_chrY_T0002014:0;Name=ENSG00000310249;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26277767	26285568	.	+	.	source_transcript=ENST00000848545.1;source_transcript_name=ENST00000848545;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848545.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848545.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG002_chrY_T0002014;gene_id=HG002_chrY_G0000739;Parent=HG002_chrY_T0002014;transcript_name=HG002_chrY_T0002014;gene_name=ENSG00000310249;ID=intron:HG002_chrY_T0002014:0;Name=ENSG00000310249;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26285569	26285668	.	+	.	source_transcript=ENST00000848545.1;source_transcript_name=ENST00000848545;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848545.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848545.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG002_chrY_T0002014;gene_id=HG002_chrY_G0000739;Parent=HG002_chrY_T0002014;transcript_name=HG002_chrY_T0002014;gene_name=ENSG00000310249;ID=exon:HG002_chrY_T0002014:1;Name=ENSG00000310249;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26290378	26295737	.	+	.	source_gene_common_name=CSPG4P3Y;source_gene=ENSG00000172342.5;gene_id=HG002_chrY_G0000740;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=CSPG4P3Y;gene_sources=liftoff;ID=HG002_chrY_G0000740;Name=CSPG4P3Y
HG002_chrY	CAT	transcript	26290378	26295737	1000	+	.	source_transcript=ENST00000418188.1;source_transcript_name=CSPG4P3Y-201;source_gene=ENSG00000172342.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000172342.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418188.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P3Y;transcript_id=HG002_chrY_T0002015;gene_id=HG002_chrY_G0000740;Parent=HG002_chrY_G0000740;transcript_name=HG002_chrY_T0002015;gene_name=CSPG4P3Y;ID=HG002_chrY_T0002015;Name=CSPG4P3Y
HG002_chrY	CAT	exon	26290378	26290541	.	+	.	source_transcript=ENST00000418188.1;source_transcript_name=CSPG4P3Y-201;source_gene=ENSG00000172342.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000172342.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P3Y;transcript_id=HG002_chrY_T0002015;gene_id=HG002_chrY_G0000740;Parent=HG002_chrY_T0002015;transcript_name=HG002_chrY_T0002015;gene_name=CSPG4P3Y;ID=exon:HG002_chrY_T0002015:0;Name=CSPG4P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26290542	26292177	.	+	.	source_transcript=ENST00000418188.1;source_transcript_name=CSPG4P3Y-201;source_gene=ENSG00000172342.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000172342.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P3Y;transcript_id=HG002_chrY_T0002015;gene_id=HG002_chrY_G0000740;Parent=HG002_chrY_T0002015;transcript_name=HG002_chrY_T0002015;gene_name=CSPG4P3Y;ID=intron:HG002_chrY_T0002015:0;Name=CSPG4P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26292178	26295737	.	+	.	source_transcript=ENST00000418188.1;source_transcript_name=CSPG4P3Y-201;source_gene=ENSG00000172342.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000172342.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P3Y;transcript_id=HG002_chrY_T0002015;gene_id=HG002_chrY_G0000740;Parent=HG002_chrY_T0002015;transcript_name=HG002_chrY_T0002015;gene_name=CSPG4P3Y;ID=exon:HG002_chrY_T0002015:1;Name=CSPG4P3Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26295015	26298812	.	+	.	source_gene_common_name=CSPG4P2Y;source_gene=ENSG00000244231.1;gene_id=HG002_chrY_G0000741;gene_biotype=lncRNA;gene_name=CSPG4P2Y;gene_sources=liftoff;ID=HG002_chrY_G0000741;Name=CSPG4P2Y
HG002_chrY	CAT	transcript	26295015	26298812	1000	+	.	source_transcript=ENST00000306853.1;source_transcript_name=CSPG4P2Y-201;source_gene=ENSG00000244231.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000244231.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306853.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P2Y;transcript_id=HG002_chrY_T0002016;gene_id=HG002_chrY_G0000741;Parent=HG002_chrY_G0000741;transcript_name=HG002_chrY_T0002016;gene_name=CSPG4P2Y;ID=HG002_chrY_T0002016;Name=CSPG4P2Y
HG002_chrY	CAT	exon	26295015	26295737	.	+	.	source_transcript=ENST00000306853.1;source_transcript_name=CSPG4P2Y-201;source_gene=ENSG00000244231.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000244231.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306853.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P2Y;transcript_id=HG002_chrY_T0002016;gene_id=HG002_chrY_G0000741;Parent=HG002_chrY_T0002016;transcript_name=HG002_chrY_T0002016;gene_name=CSPG4P2Y;ID=exon:HG002_chrY_T0002016:0;Name=CSPG4P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26295738	26298740	.	+	.	source_transcript=ENST00000306853.1;source_transcript_name=CSPG4P2Y-201;source_gene=ENSG00000244231.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000244231.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306853.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P2Y;transcript_id=HG002_chrY_T0002016;gene_id=HG002_chrY_G0000741;Parent=HG002_chrY_T0002016;transcript_name=HG002_chrY_T0002016;gene_name=CSPG4P2Y;ID=intron:HG002_chrY_T0002016:0;Name=CSPG4P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26298741	26298812	.	+	.	source_transcript=ENST00000306853.1;source_transcript_name=CSPG4P2Y-201;source_gene=ENSG00000244231.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000244231.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306853.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P2Y;transcript_id=HG002_chrY_T0002016;gene_id=HG002_chrY_G0000741;Parent=HG002_chrY_T0002016;transcript_name=HG002_chrY_T0002016;gene_name=CSPG4P2Y;ID=exon:HG002_chrY_T0002016:1;Name=CSPG4P2Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26298741	26302930	.	+	.	source_gene_common_name=DNM1P24;source_gene=ENSG00000242854.1;gene_id=HG002_chrY_G0000742;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=DNM1P24;gene_sources=liftoff;ID=HG002_chrY_G0000742;Name=DNM1P24
HG002_chrY	CAT	transcript	26298741	26302930	1000	+	.	source_transcript=ENST00000441091.1;source_transcript_name=DNM1P24-201;source_gene=ENSG00000242854.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242854.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441091.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P24;transcript_id=HG002_chrY_T0002017;gene_id=HG002_chrY_G0000742;Parent=HG002_chrY_G0000742;transcript_name=HG002_chrY_T0002017;gene_name=DNM1P24;ID=HG002_chrY_T0002017;Name=DNM1P24
HG002_chrY	CAT	exon	26298741	26298972	.	+	.	source_transcript=ENST00000441091.1;source_transcript_name=DNM1P24-201;source_gene=ENSG00000242854.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242854.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441091.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P24;transcript_id=HG002_chrY_T0002017;gene_id=HG002_chrY_G0000742;Parent=HG002_chrY_T0002017;transcript_name=HG002_chrY_T0002017;gene_name=DNM1P24;ID=exon:HG002_chrY_T0002017:0;Name=DNM1P24;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26298973	26299223	.	+	.	source_transcript=ENST00000441091.1;source_transcript_name=DNM1P24-201;source_gene=ENSG00000242854.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242854.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441091.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P24;transcript_id=HG002_chrY_T0002017;gene_id=HG002_chrY_G0000742;Parent=HG002_chrY_T0002017;transcript_name=HG002_chrY_T0002017;gene_name=DNM1P24;ID=intron:HG002_chrY_T0002017:0;Name=DNM1P24;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26299224	26299428	.	+	.	source_transcript=ENST00000441091.1;source_transcript_name=DNM1P24-201;source_gene=ENSG00000242854.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242854.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441091.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P24;transcript_id=HG002_chrY_T0002017;gene_id=HG002_chrY_G0000742;Parent=HG002_chrY_T0002017;transcript_name=HG002_chrY_T0002017;gene_name=DNM1P24;ID=exon:HG002_chrY_T0002017:1;Name=DNM1P24;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26299429	26302877	.	+	.	source_transcript=ENST00000441091.1;source_transcript_name=DNM1P24-201;source_gene=ENSG00000242854.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242854.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441091.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P24;transcript_id=HG002_chrY_T0002017;gene_id=HG002_chrY_G0000742;Parent=HG002_chrY_T0002017;transcript_name=HG002_chrY_T0002017;gene_name=DNM1P24;ID=intron:HG002_chrY_T0002017:1;Name=DNM1P24;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26302878	26302930	.	+	.	source_transcript=ENST00000441091.1;source_transcript_name=DNM1P24-201;source_gene=ENSG00000242854.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242854.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441091.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P24;transcript_id=HG002_chrY_T0002017;gene_id=HG002_chrY_G0000742;Parent=HG002_chrY_T0002017;transcript_name=HG002_chrY_T0002017;gene_name=DNM1P24;ID=exon:HG002_chrY_T0002017:2;Name=DNM1P24;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26299175	26299769	.	-	.	source_gene_common_name=ENSG00000230977;source_gene=ENSG00000230977.1;gene_id=HG002_chrY_G0000743;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000230977;gene_sources=liftoff;ID=HG002_chrY_G0000743;Name=ENSG00000230977
HG002_chrY	CAT	transcript	26299175	26299769	1000	-	.	source_transcript=ENST00000418278.1;source_transcript_name=ENST00000418278;source_gene=ENSG00000230977.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230977.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418278.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230977;transcript_id=HG002_chrY_T0002018;gene_id=HG002_chrY_G0000743;Parent=HG002_chrY_G0000743;transcript_name=HG002_chrY_T0002018;gene_name=ENSG00000230977;ID=HG002_chrY_T0002018;Name=ENSG00000230977
HG002_chrY	CAT	exon	26299175	26299769	.	-	.	source_transcript=ENST00000418278.1;source_transcript_name=ENST00000418278;source_gene=ENSG00000230977.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230977.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418278.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230977;transcript_id=HG002_chrY_T0002018;gene_id=HG002_chrY_G0000743;Parent=HG002_chrY_T0002018;transcript_name=HG002_chrY_T0002018;gene_name=ENSG00000230977;ID=exon:HG002_chrY_T0002018:0;Name=ENSG00000230977;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26305037	26310621	.	-	.	source_gene_common_name=ENSG00000307363;source_gene=ENSG00000307363.1;gene_id=HG002_chrY_G0000744;gene_biotype=lncRNA;gene_name=ENSG00000307363;gene_sources=liftoff;ID=HG002_chrY_G0000744;Name=ENSG00000307363
HG002_chrY	CAT	transcript	26305037	26310448	1000	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002019;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_G0000744;transcript_name=HG002_chrY_T0002019;gene_name=ENSG00000307363;ID=HG002_chrY_T0002019;Name=ENSG00000307363
HG002_chrY	CAT	exon	26305037	26307891	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002019;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002019;transcript_name=HG002_chrY_T0002019;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002019:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26307892	26308100	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002019;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002019;transcript_name=HG002_chrY_T0002019;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002019:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26308101	26308215	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002019;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002019;transcript_name=HG002_chrY_T0002019;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002019:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26308216	26309255	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002019;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002019;transcript_name=HG002_chrY_T0002019;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002019:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26309256	26309316	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002019;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002019;transcript_name=HG002_chrY_T0002019;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002019:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26309317	26309583	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002019;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002019;transcript_name=HG002_chrY_T0002019;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002019:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26309584	26310448	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002019;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002019;transcript_name=HG002_chrY_T0002019;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002019:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	26307324	26310191	1000	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002020;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_G0000744;transcript_name=HG002_chrY_T0002020;gene_name=ENSG00000307363;ID=HG002_chrY_T0002020;Name=ENSG00000307363
HG002_chrY	CAT	exon	26307324	26307891	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002020;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002020;transcript_name=HG002_chrY_T0002020;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002020:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26307892	26308100	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002020;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002020;transcript_name=HG002_chrY_T0002020;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002020:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26308101	26308215	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002020;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002020;transcript_name=HG002_chrY_T0002020;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002020:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26308216	26309238	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002020;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002020;transcript_name=HG002_chrY_T0002020;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002020:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26309239	26309316	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002020;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002020;transcript_name=HG002_chrY_T0002020;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002020:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26309317	26309583	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002020;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002020;transcript_name=HG002_chrY_T0002020;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002020:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26309584	26310191	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002020;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002020;transcript_name=HG002_chrY_T0002020;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002020:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	26307725	26308450	1000	-	.	source_transcript=ENST00000825441.1;source_transcript_name=ENST00000825441;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825441.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002021;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_G0000744;transcript_name=HG002_chrY_T0002021;gene_name=ENSG00000307363;ID=HG002_chrY_T0002021;Name=ENSG00000307363
HG002_chrY	CAT	exon	26307725	26307891	.	-	.	source_transcript=ENST00000825441.1;source_transcript_name=ENST00000825441;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002021;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002021;transcript_name=HG002_chrY_T0002021;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002021:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26307892	26308100	.	-	.	source_transcript=ENST00000825441.1;source_transcript_name=ENST00000825441;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002021;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002021;transcript_name=HG002_chrY_T0002021;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002021:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26308101	26308450	.	-	.	source_transcript=ENST00000825441.1;source_transcript_name=ENST00000825441;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002021;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002021;transcript_name=HG002_chrY_T0002021;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002021:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	26307726	26309937	1000	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002022;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_G0000744;transcript_name=HG002_chrY_T0002022;gene_name=ENSG00000307363;ID=HG002_chrY_T0002022;Name=ENSG00000307363
HG002_chrY	CAT	exon	26307726	26307891	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002022;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002022;transcript_name=HG002_chrY_T0002022;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002022:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26307892	26308100	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002022;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002022;transcript_name=HG002_chrY_T0002022;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002022:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26308101	26308215	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002022;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002022;transcript_name=HG002_chrY_T0002022;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002022:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26308216	26309238	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002022;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002022;transcript_name=HG002_chrY_T0002022;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002022:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26309239	26309316	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002022;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002022;transcript_name=HG002_chrY_T0002022;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002022:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26309317	26309754	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002022;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002022;transcript_name=HG002_chrY_T0002022;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002022:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26309755	26309937	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002022;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002022;transcript_name=HG002_chrY_T0002022;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002022:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	26307726	26309601	1000	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002023;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_G0000744;transcript_name=HG002_chrY_T0002023;gene_name=ENSG00000307363;ID=HG002_chrY_T0002023;Name=ENSG00000307363
HG002_chrY	CAT	exon	26307726	26307891	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002023;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002023;transcript_name=HG002_chrY_T0002023;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002023:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26307892	26308100	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002023;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002023;transcript_name=HG002_chrY_T0002023;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002023:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26308101	26308215	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002023;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002023;transcript_name=HG002_chrY_T0002023;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002023:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26308216	26309238	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002023;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002023;transcript_name=HG002_chrY_T0002023;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002023:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26309239	26309316	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002023;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002023;transcript_name=HG002_chrY_T0002023;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002023:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26309317	26309427	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002023;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002023;transcript_name=HG002_chrY_T0002023;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002023:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26309428	26309601	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002023;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002023;transcript_name=HG002_chrY_T0002023;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002023:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	26307726	26309818	1000	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002024;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_G0000744;transcript_name=HG002_chrY_T0002024;gene_name=ENSG00000307363;ID=HG002_chrY_T0002024;Name=ENSG00000307363
HG002_chrY	CAT	exon	26307726	26307891	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002024;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002024;transcript_name=HG002_chrY_T0002024;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002024:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26307892	26308100	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002024;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002024;transcript_name=HG002_chrY_T0002024;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002024:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26308101	26308215	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002024;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002024;transcript_name=HG002_chrY_T0002024;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002024:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26308216	26309077	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002024;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002024;transcript_name=HG002_chrY_T0002024;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002024:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26309078	26309316	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002024;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002024;transcript_name=HG002_chrY_T0002024;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002024:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26309317	26309583	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002024;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002024;transcript_name=HG002_chrY_T0002024;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002024:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26309584	26309818	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002024;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002024;transcript_name=HG002_chrY_T0002024;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002024:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	26307726	26310027	1000	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002025;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_G0000744;transcript_name=HG002_chrY_T0002025;gene_name=ENSG00000307363;ID=HG002_chrY_T0002025;Name=ENSG00000307363
HG002_chrY	CAT	exon	26307726	26307891	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002025;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002025;transcript_name=HG002_chrY_T0002025;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002025:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26307892	26308100	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002025;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002025;transcript_name=HG002_chrY_T0002025;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002025:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26308101	26308215	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002025;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002025;transcript_name=HG002_chrY_T0002025;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002025:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26308216	26309255	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002025;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002025;transcript_name=HG002_chrY_T0002025;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002025:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26309256	26309316	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002025;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002025;transcript_name=HG002_chrY_T0002025;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002025:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26309317	26309854	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002025;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002025;transcript_name=HG002_chrY_T0002025;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002025:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26309855	26310027	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002025;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002025;transcript_name=HG002_chrY_T0002025;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002025:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	26307726	26310607	1000	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002026;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_G0000744;transcript_name=HG002_chrY_T0002026;gene_name=ENSG00000307363;ID=HG002_chrY_T0002026;Name=ENSG00000307363
HG002_chrY	CAT	exon	26307726	26307891	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002026;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002026;transcript_name=HG002_chrY_T0002026;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002026:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26307892	26308100	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002026;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002026;transcript_name=HG002_chrY_T0002026;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002026:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26308101	26308215	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002026;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002026;transcript_name=HG002_chrY_T0002026;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002026:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26308216	26309255	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002026;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002026;transcript_name=HG002_chrY_T0002026;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002026:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26309256	26309316	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002026;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002026;transcript_name=HG002_chrY_T0002026;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002026:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26309317	26310540	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002026;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002026;transcript_name=HG002_chrY_T0002026;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002026:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26310541	26310607	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002026;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002026;transcript_name=HG002_chrY_T0002026;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002026:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	26307726	26309601	1000	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002027;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_G0000744;transcript_name=HG002_chrY_T0002027;gene_name=ENSG00000307363;ID=HG002_chrY_T0002027;Name=ENSG00000307363
HG002_chrY	CAT	exon	26307726	26307891	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002027;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002027;transcript_name=HG002_chrY_T0002027;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002027:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26307892	26308100	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002027;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002027;transcript_name=HG002_chrY_T0002027;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002027:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26308101	26308215	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002027;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002027;transcript_name=HG002_chrY_T0002027;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002027:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26308216	26309077	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002027;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002027;transcript_name=HG002_chrY_T0002027;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002027:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26309078	26309316	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002027;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002027;transcript_name=HG002_chrY_T0002027;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002027:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26309317	26309427	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002027;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002027;transcript_name=HG002_chrY_T0002027;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002027:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26309428	26309601	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002027;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002027;transcript_name=HG002_chrY_T0002027;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002027:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	26307726	26309916	1000	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002028;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_G0000744;transcript_name=HG002_chrY_T0002028;gene_name=ENSG00000307363;ID=HG002_chrY_T0002028;Name=ENSG00000307363
HG002_chrY	CAT	exon	26307726	26307891	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002028;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002028;transcript_name=HG002_chrY_T0002028;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002028:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26307892	26308100	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002028;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002028;transcript_name=HG002_chrY_T0002028;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002028:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26308101	26308215	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002028;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002028;transcript_name=HG002_chrY_T0002028;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002028:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26308216	26309077	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002028;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002028;transcript_name=HG002_chrY_T0002028;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002028:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26309078	26309316	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002028;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002028;transcript_name=HG002_chrY_T0002028;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002028:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26309317	26309754	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002028;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002028;transcript_name=HG002_chrY_T0002028;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002028:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26309755	26309916	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002028;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002028;transcript_name=HG002_chrY_T0002028;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002028:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	26307726	26310621	1000	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002029;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_G0000744;transcript_name=HG002_chrY_T0002029;gene_name=ENSG00000307363;ID=HG002_chrY_T0002029;Name=ENSG00000307363
HG002_chrY	CAT	exon	26307726	26307891	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002029;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002029;transcript_name=HG002_chrY_T0002029;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002029:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26307892	26308100	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002029;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002029;transcript_name=HG002_chrY_T0002029;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002029:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26308101	26308215	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002029;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002029;transcript_name=HG002_chrY_T0002029;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002029:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26308216	26309077	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002029;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002029;transcript_name=HG002_chrY_T0002029;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002029:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26309078	26309316	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002029;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002029;transcript_name=HG002_chrY_T0002029;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002029:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26309317	26310540	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002029;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002029;transcript_name=HG002_chrY_T0002029;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002029:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26310541	26310621	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002029;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002029;transcript_name=HG002_chrY_T0002029;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002029:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	26307726	26309971	1000	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002030;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_G0000744;transcript_name=HG002_chrY_T0002030;gene_name=ENSG00000307363;ID=HG002_chrY_T0002030;Name=ENSG00000307363
HG002_chrY	CAT	exon	26307726	26307891	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002030;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002030;transcript_name=HG002_chrY_T0002030;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002030:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26307892	26308100	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002030;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002030;transcript_name=HG002_chrY_T0002030;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002030:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26308101	26308215	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002030;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002030;transcript_name=HG002_chrY_T0002030;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002030:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26308216	26309238	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002030;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002030;transcript_name=HG002_chrY_T0002030;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002030:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26309239	26309316	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002030;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002030;transcript_name=HG002_chrY_T0002030;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002030:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26309317	26309854	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002030;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002030;transcript_name=HG002_chrY_T0002030;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002030:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26309855	26309971	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002030;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002030;transcript_name=HG002_chrY_T0002030;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002030:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	26307726	26309937	1000	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002031;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_G0000744;transcript_name=HG002_chrY_T0002031;gene_name=ENSG00000307363;ID=HG002_chrY_T0002031;Name=ENSG00000307363
HG002_chrY	CAT	exon	26307726	26307891	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002031;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002031;transcript_name=HG002_chrY_T0002031;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002031:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26307892	26308100	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002031;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002031;transcript_name=HG002_chrY_T0002031;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002031:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26308101	26308215	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002031;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002031;transcript_name=HG002_chrY_T0002031;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002031:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26308216	26309255	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002031;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002031;transcript_name=HG002_chrY_T0002031;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002031:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26309256	26309316	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002031;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002031;transcript_name=HG002_chrY_T0002031;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002031:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26309317	26309754	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002031;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002031;transcript_name=HG002_chrY_T0002031;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002031:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26309755	26309937	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002031;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002031;transcript_name=HG002_chrY_T0002031;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002031:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	26307726	26309695	1000	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002032;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_G0000744;transcript_name=HG002_chrY_T0002032;gene_name=ENSG00000307363;ID=HG002_chrY_T0002032;Name=ENSG00000307363
HG002_chrY	CAT	exon	26307726	26307891	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002032;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002032;transcript_name=HG002_chrY_T0002032;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002032:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26307892	26308100	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002032;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002032;transcript_name=HG002_chrY_T0002032;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002032:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26308101	26308215	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002032;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002032;transcript_name=HG002_chrY_T0002032;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002032:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26308216	26309255	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002032;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002032;transcript_name=HG002_chrY_T0002032;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002032:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26309256	26309316	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002032;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002032;transcript_name=HG002_chrY_T0002032;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002032:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26309317	26309427	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002032;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002032;transcript_name=HG002_chrY_T0002032;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002032:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26309428	26309695	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002032;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002032;transcript_name=HG002_chrY_T0002032;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002032:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	26307726	26310019	1000	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002033;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_G0000744;transcript_name=HG002_chrY_T0002033;gene_name=ENSG00000307363;ID=HG002_chrY_T0002033;Name=ENSG00000307363
HG002_chrY	CAT	exon	26307726	26307891	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002033;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002033;transcript_name=HG002_chrY_T0002033;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002033:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26307892	26308100	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002033;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002033;transcript_name=HG002_chrY_T0002033;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002033:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26308101	26308215	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002033;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002033;transcript_name=HG002_chrY_T0002033;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002033:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26308216	26309077	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002033;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002033;transcript_name=HG002_chrY_T0002033;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002033:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26309078	26309316	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002033;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002033;transcript_name=HG002_chrY_T0002033;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002033:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26309317	26309854	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002033;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002033;transcript_name=HG002_chrY_T0002033;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002033:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26309855	26310019	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002033;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002033;transcript_name=HG002_chrY_T0002033;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002033:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	26307728	26309857	1000	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002034;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_G0000744;transcript_name=HG002_chrY_T0002034;gene_name=ENSG00000307363;ID=HG002_chrY_T0002034;Name=ENSG00000307363
HG002_chrY	CAT	exon	26307728	26307891	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002034;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002034;transcript_name=HG002_chrY_T0002034;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002034:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26307892	26308100	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002034;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002034;transcript_name=HG002_chrY_T0002034;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002034:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26308101	26308215	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002034;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002034;transcript_name=HG002_chrY_T0002034;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002034:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26308216	26309077	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002034;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002034;transcript_name=HG002_chrY_T0002034;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002034:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26309078	26309316	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002034;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002034;transcript_name=HG002_chrY_T0002034;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002034:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26309317	26309668	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002034;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002034;transcript_name=HG002_chrY_T0002034;gene_name=ENSG00000307363;ID=intron:HG002_chrY_T0002034:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26309669	26309857	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG002_chrY_T0002034;gene_id=HG002_chrY_G0000744;Parent=HG002_chrY_T0002034;transcript_name=HG002_chrY_T0002034;gene_name=ENSG00000307363;ID=exon:HG002_chrY_T0002034:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26307759	26314066	.	-	.	source_gene_common_name=GOLGA6L16P;source_gene=ENSG00000197092.5;gene_id=HG002_chrY_G0000745;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=GOLGA6L16P;gene_sources=liftoff;ID=HG002_chrY_G0000745;Name=GOLGA6L16P
HG002_chrY	CAT	transcript	26307759	26314066	1000	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0002035;gene_id=HG002_chrY_G0000745;Parent=HG002_chrY_G0000745;transcript_name=HG002_chrY_T0002035;gene_name=GOLGA6L16P;ID=HG002_chrY_T0002035;Name=GOLGA6L16P
HG002_chrY	CAT	exon	26307759	26307890	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0002035;gene_id=HG002_chrY_G0000745;Parent=HG002_chrY_T0002035;transcript_name=HG002_chrY_T0002035;gene_name=GOLGA6L16P;ID=exon:HG002_chrY_T0002035:0;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26307891	26308099	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0002035;gene_id=HG002_chrY_G0000745;Parent=HG002_chrY_T0002035;transcript_name=HG002_chrY_T0002035;gene_name=GOLGA6L16P;ID=intron:HG002_chrY_T0002035:0;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26308100	26308223	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0002035;gene_id=HG002_chrY_G0000745;Parent=HG002_chrY_T0002035;transcript_name=HG002_chrY_T0002035;gene_name=GOLGA6L16P;ID=exon:HG002_chrY_T0002035:1;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26308224	26309245	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0002035;gene_id=HG002_chrY_G0000745;Parent=HG002_chrY_T0002035;transcript_name=HG002_chrY_T0002035;gene_name=GOLGA6L16P;ID=intron:HG002_chrY_T0002035:1;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26309246	26309316	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0002035;gene_id=HG002_chrY_G0000745;Parent=HG002_chrY_T0002035;transcript_name=HG002_chrY_T0002035;gene_name=GOLGA6L16P;ID=exon:HG002_chrY_T0002035:2;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26309317	26309583	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0002035;gene_id=HG002_chrY_G0000745;Parent=HG002_chrY_T0002035;transcript_name=HG002_chrY_T0002035;gene_name=GOLGA6L16P;ID=intron:HG002_chrY_T0002035:2;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26309584	26310153	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0002035;gene_id=HG002_chrY_G0000745;Parent=HG002_chrY_T0002035;transcript_name=HG002_chrY_T0002035;gene_name=GOLGA6L16P;ID=exon:HG002_chrY_T0002035:3;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26310154	26310558	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0002035;gene_id=HG002_chrY_G0000745;Parent=HG002_chrY_T0002035;transcript_name=HG002_chrY_T0002035;gene_name=GOLGA6L16P;ID=intron:HG002_chrY_T0002035:3;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26310559	26310615	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0002035;gene_id=HG002_chrY_G0000745;Parent=HG002_chrY_T0002035;transcript_name=HG002_chrY_T0002035;gene_name=GOLGA6L16P;ID=exon:HG002_chrY_T0002035:4;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26310616	26311271	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0002035;gene_id=HG002_chrY_G0000745;Parent=HG002_chrY_T0002035;transcript_name=HG002_chrY_T0002035;gene_name=GOLGA6L16P;ID=intron:HG002_chrY_T0002035:4;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26311272	26311352	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0002035;gene_id=HG002_chrY_G0000745;Parent=HG002_chrY_T0002035;transcript_name=HG002_chrY_T0002035;gene_name=GOLGA6L16P;ID=exon:HG002_chrY_T0002035:5;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26311353	26311537	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0002035;gene_id=HG002_chrY_G0000745;Parent=HG002_chrY_T0002035;transcript_name=HG002_chrY_T0002035;gene_name=GOLGA6L16P;ID=intron:HG002_chrY_T0002035:5;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26311538	26311597	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0002035;gene_id=HG002_chrY_G0000745;Parent=HG002_chrY_T0002035;transcript_name=HG002_chrY_T0002035;gene_name=GOLGA6L16P;ID=exon:HG002_chrY_T0002035:6;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26311598	26312219	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0002035;gene_id=HG002_chrY_G0000745;Parent=HG002_chrY_T0002035;transcript_name=HG002_chrY_T0002035;gene_name=GOLGA6L16P;ID=intron:HG002_chrY_T0002035:6;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26312220	26312339	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0002035;gene_id=HG002_chrY_G0000745;Parent=HG002_chrY_T0002035;transcript_name=HG002_chrY_T0002035;gene_name=GOLGA6L16P;ID=exon:HG002_chrY_T0002035:7;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26312340	26313982	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0002035;gene_id=HG002_chrY_G0000745;Parent=HG002_chrY_T0002035;transcript_name=HG002_chrY_T0002035;gene_name=GOLGA6L16P;ID=intron:HG002_chrY_T0002035:7;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26313983	26314066	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG002_chrY_T0002035;gene_id=HG002_chrY_G0000745;Parent=HG002_chrY_T0002035;transcript_name=HG002_chrY_T0002035;gene_name=GOLGA6L16P;ID=exon:HG002_chrY_T0002035:8;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26324409	26339897	.	-	.	source_gene_common_name=ENSG00000235981;source_gene=ENSG00000235981.2;gene_id=HG002_chrY_G0000746;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000235981;gene_sources=liftoff;ID=HG002_chrY_G0000746;Name=ENSG00000235981
HG002_chrY	CAT	transcript	26324409	26339897	1000	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG002_chrY_T0002036;gene_id=HG002_chrY_G0000746;Parent=HG002_chrY_G0000746;transcript_name=HG002_chrY_T0002036;gene_name=ENSG00000235981;ID=HG002_chrY_T0002036;Name=ENSG00000235981
HG002_chrY	CAT	exon	26324409	26324504	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG002_chrY_T0002036;gene_id=HG002_chrY_G0000746;Parent=HG002_chrY_T0002036;transcript_name=HG002_chrY_T0002036;gene_name=ENSG00000235981;ID=exon:HG002_chrY_T0002036:0;Name=ENSG00000235981;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26324505	26325233	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG002_chrY_T0002036;gene_id=HG002_chrY_G0000746;Parent=HG002_chrY_T0002036;transcript_name=HG002_chrY_T0002036;gene_name=ENSG00000235981;ID=intron:HG002_chrY_T0002036:0;Name=ENSG00000235981;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26325234	26325282	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG002_chrY_T0002036;gene_id=HG002_chrY_G0000746;Parent=HG002_chrY_T0002036;transcript_name=HG002_chrY_T0002036;gene_name=ENSG00000235981;ID=exon:HG002_chrY_T0002036:1;Name=ENSG00000235981;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26325283	26331789	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG002_chrY_T0002036;gene_id=HG002_chrY_G0000746;Parent=HG002_chrY_T0002036;transcript_name=HG002_chrY_T0002036;gene_name=ENSG00000235981;ID=intron:HG002_chrY_T0002036:1;Name=ENSG00000235981;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26331790	26331848	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG002_chrY_T0002036;gene_id=HG002_chrY_G0000746;Parent=HG002_chrY_T0002036;transcript_name=HG002_chrY_T0002036;gene_name=ENSG00000235981;ID=exon:HG002_chrY_T0002036:2;Name=ENSG00000235981;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26331849	26336136	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG002_chrY_T0002036;gene_id=HG002_chrY_G0000746;Parent=HG002_chrY_T0002036;transcript_name=HG002_chrY_T0002036;gene_name=ENSG00000235981;ID=intron:HG002_chrY_T0002036:2;Name=ENSG00000235981;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26336137	26336221	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG002_chrY_T0002036;gene_id=HG002_chrY_G0000746;Parent=HG002_chrY_T0002036;transcript_name=HG002_chrY_T0002036;gene_name=ENSG00000235981;ID=exon:HG002_chrY_T0002036:3;Name=ENSG00000235981;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26336222	26337314	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG002_chrY_T0002036;gene_id=HG002_chrY_G0000746;Parent=HG002_chrY_T0002036;transcript_name=HG002_chrY_T0002036;gene_name=ENSG00000235981;ID=intron:HG002_chrY_T0002036:3;Name=ENSG00000235981;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26337315	26337399	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG002_chrY_T0002036;gene_id=HG002_chrY_G0000746;Parent=HG002_chrY_T0002036;transcript_name=HG002_chrY_T0002036;gene_name=ENSG00000235981;ID=exon:HG002_chrY_T0002036:4;Name=ENSG00000235981;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26337400	26339759	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG002_chrY_T0002036;gene_id=HG002_chrY_G0000746;Parent=HG002_chrY_T0002036;transcript_name=HG002_chrY_T0002036;gene_name=ENSG00000235981;ID=intron:HG002_chrY_T0002036:4;Name=ENSG00000235981;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26339760	26339897	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG002_chrY_T0002036;gene_id=HG002_chrY_G0000746;Parent=HG002_chrY_T0002036;transcript_name=HG002_chrY_T0002036;gene_name=ENSG00000235981;ID=exon:HG002_chrY_T0002036:5;Name=ENSG00000235981;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26328889	26344869	.	-	.	source_gene_common_name=ENSG00000299288;source_gene=ENSG00000299288.1;gene_id=HG002_chrY_G0000747;gene_biotype=lncRNA;gene_name=ENSG00000299288;gene_sources=liftoff;ID=HG002_chrY_G0000747;Name=ENSG00000299288
HG002_chrY	CAT	transcript	26328889	26344314	1000	-	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002037;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_G0000747;transcript_name=HG002_chrY_T0002037;gene_name=ENSG00000299288;ID=HG002_chrY_T0002037;Name=ENSG00000299288
HG002_chrY	CAT	exon	26328889	26329907	.	-	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002037;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002037;transcript_name=HG002_chrY_T0002037;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002037:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26329908	26336136	.	-	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002037;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002037;transcript_name=HG002_chrY_T0002037;gene_name=ENSG00000299288;ID=intron:HG002_chrY_T0002037:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26336137	26336221	.	-	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002037;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002037;transcript_name=HG002_chrY_T0002037;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002037:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26336222	26337314	.	-	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002037;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002037;transcript_name=HG002_chrY_T0002037;gene_name=ENSG00000299288;ID=intron:HG002_chrY_T0002037:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26337315	26337399	.	-	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002037;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002037;transcript_name=HG002_chrY_T0002037;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002037:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26337400	26339775	.	-	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002037;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002037;transcript_name=HG002_chrY_T0002037;gene_name=ENSG00000299288;ID=intron:HG002_chrY_T0002037:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26339776	26339897	.	-	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002037;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002037;transcript_name=HG002_chrY_T0002037;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002037:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26339898	26343853	.	-	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002037;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002037;transcript_name=HG002_chrY_T0002037;gene_name=ENSG00000299288;ID=intron:HG002_chrY_T0002037:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26343854	26344314	.	-	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002037;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002037;transcript_name=HG002_chrY_T0002037;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002037:4;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	26328889	26344089	1000	-	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002038;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_G0000747;transcript_name=HG002_chrY_T0002038;gene_name=ENSG00000299288;ID=HG002_chrY_T0002038;Name=ENSG00000299288
HG002_chrY	CAT	exon	26328889	26329907	.	-	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002038;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002038;transcript_name=HG002_chrY_T0002038;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002038:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26329908	26336136	.	-	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002038;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002038;transcript_name=HG002_chrY_T0002038;gene_name=ENSG00000299288;ID=intron:HG002_chrY_T0002038:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26336137	26336221	.	-	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002038;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002038;transcript_name=HG002_chrY_T0002038;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002038:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26336222	26339759	.	-	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002038;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002038;transcript_name=HG002_chrY_T0002038;gene_name=ENSG00000299288;ID=intron:HG002_chrY_T0002038:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26339760	26339897	.	-	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002038;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002038;transcript_name=HG002_chrY_T0002038;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002038:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26339898	26343853	.	-	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002038;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002038;transcript_name=HG002_chrY_T0002038;gene_name=ENSG00000299288;ID=intron:HG002_chrY_T0002038:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26343854	26344089	.	-	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002038;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002038;transcript_name=HG002_chrY_T0002038;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002038:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	26329472	26344869	1000	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002039;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_G0000747;transcript_name=HG002_chrY_T0002039;gene_name=ENSG00000299288;ID=HG002_chrY_T0002039;Name=ENSG00000299288
HG002_chrY	CAT	exon	26329472	26329907	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002039;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002039;transcript_name=HG002_chrY_T0002039;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002039:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26329908	26336136	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002039;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002039;transcript_name=HG002_chrY_T0002039;gene_name=ENSG00000299288;ID=intron:HG002_chrY_T0002039:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26336137	26336221	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002039;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002039;transcript_name=HG002_chrY_T0002039;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002039:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26336222	26337314	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002039;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002039;transcript_name=HG002_chrY_T0002039;gene_name=ENSG00000299288;ID=intron:HG002_chrY_T0002039:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26337315	26337399	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002039;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002039;transcript_name=HG002_chrY_T0002039;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002039:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26337400	26339759	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002039;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002039;transcript_name=HG002_chrY_T0002039;gene_name=ENSG00000299288;ID=intron:HG002_chrY_T0002039:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26339760	26339897	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002039;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002039;transcript_name=HG002_chrY_T0002039;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002039:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26339898	26343853	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002039;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002039;transcript_name=HG002_chrY_T0002039;gene_name=ENSG00000299288;ID=intron:HG002_chrY_T0002039:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26343854	26344016	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002039;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002039;transcript_name=HG002_chrY_T0002039;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002039:4;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26344017	26344764	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002039;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002039;transcript_name=HG002_chrY_T0002039;gene_name=ENSG00000299288;ID=intron:HG002_chrY_T0002039:4;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26344765	26344869	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002039;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002039;transcript_name=HG002_chrY_T0002039;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002039:5;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	26329472	26344869	1000	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002040;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_G0000747;transcript_name=HG002_chrY_T0002040;gene_name=ENSG00000299288;ID=HG002_chrY_T0002040;Name=ENSG00000299288
HG002_chrY	CAT	exon	26329472	26329907	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002040;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002040;transcript_name=HG002_chrY_T0002040;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002040:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26329908	26336136	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002040;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002040;transcript_name=HG002_chrY_T0002040;gene_name=ENSG00000299288;ID=intron:HG002_chrY_T0002040:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26336137	26336221	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002040;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002040;transcript_name=HG002_chrY_T0002040;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002040:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26336222	26337314	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002040;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002040;transcript_name=HG002_chrY_T0002040;gene_name=ENSG00000299288;ID=intron:HG002_chrY_T0002040:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26337315	26337399	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002040;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002040;transcript_name=HG002_chrY_T0002040;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002040:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26337400	26339775	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002040;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002040;transcript_name=HG002_chrY_T0002040;gene_name=ENSG00000299288;ID=intron:HG002_chrY_T0002040:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26339776	26339897	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002040;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002040;transcript_name=HG002_chrY_T0002040;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002040:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26339898	26343853	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002040;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002040;transcript_name=HG002_chrY_T0002040;gene_name=ENSG00000299288;ID=intron:HG002_chrY_T0002040:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26343854	26344016	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002040;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002040;transcript_name=HG002_chrY_T0002040;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002040:4;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26344017	26344764	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002040;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002040;transcript_name=HG002_chrY_T0002040;gene_name=ENSG00000299288;ID=intron:HG002_chrY_T0002040:4;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26344765	26344869	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002040;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002040;transcript_name=HG002_chrY_T0002040;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002040:5;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	26329472	26344869	1000	-	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002041;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_G0000747;transcript_name=HG002_chrY_T0002041;gene_name=ENSG00000299288;ID=HG002_chrY_T0002041;Name=ENSG00000299288
HG002_chrY	CAT	exon	26329472	26329907	.	-	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002041;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002041;transcript_name=HG002_chrY_T0002041;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002041:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26329908	26336136	.	-	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002041;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002041;transcript_name=HG002_chrY_T0002041;gene_name=ENSG00000299288;ID=intron:HG002_chrY_T0002041:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26336137	26336221	.	-	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002041;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002041;transcript_name=HG002_chrY_T0002041;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002041:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26336222	26339759	.	-	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002041;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002041;transcript_name=HG002_chrY_T0002041;gene_name=ENSG00000299288;ID=intron:HG002_chrY_T0002041:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26339760	26339897	.	-	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002041;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002041;transcript_name=HG002_chrY_T0002041;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002041:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26339898	26344764	.	-	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002041;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002041;transcript_name=HG002_chrY_T0002041;gene_name=ENSG00000299288;ID=intron:HG002_chrY_T0002041:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26344765	26344869	.	-	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002041;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002041;transcript_name=HG002_chrY_T0002041;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002041:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	26329485	26344265	1000	-	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002042;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_G0000747;transcript_name=HG002_chrY_T0002042;gene_name=ENSG00000299288;ID=HG002_chrY_T0002042;Name=ENSG00000299288
HG002_chrY	CAT	exon	26329485	26329907	.	-	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002042;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002042;transcript_name=HG002_chrY_T0002042;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002042:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26329908	26336136	.	-	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002042;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002042;transcript_name=HG002_chrY_T0002042;gene_name=ENSG00000299288;ID=intron:HG002_chrY_T0002042:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26336137	26336221	.	-	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002042;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002042;transcript_name=HG002_chrY_T0002042;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002042:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26336222	26339775	.	-	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002042;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002042;transcript_name=HG002_chrY_T0002042;gene_name=ENSG00000299288;ID=intron:HG002_chrY_T0002042:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26339776	26339897	.	-	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002042;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002042;transcript_name=HG002_chrY_T0002042;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002042:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26339898	26343853	.	-	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002042;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002042;transcript_name=HG002_chrY_T0002042;gene_name=ENSG00000299288;ID=intron:HG002_chrY_T0002042:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26343854	26344265	.	-	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002042;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002042;transcript_name=HG002_chrY_T0002042;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002042:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	26329485	26344862	1000	-	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002043;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_G0000747;transcript_name=HG002_chrY_T0002043;gene_name=ENSG00000299288;ID=HG002_chrY_T0002043;Name=ENSG00000299288
HG002_chrY	CAT	exon	26329485	26329907	.	-	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002043;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002043;transcript_name=HG002_chrY_T0002043;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002043:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26329908	26336136	.	-	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002043;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002043;transcript_name=HG002_chrY_T0002043;gene_name=ENSG00000299288;ID=intron:HG002_chrY_T0002043:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26336137	26336221	.	-	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002043;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002043;transcript_name=HG002_chrY_T0002043;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002043:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26336222	26339759	.	-	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002043;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002043;transcript_name=HG002_chrY_T0002043;gene_name=ENSG00000299288;ID=intron:HG002_chrY_T0002043:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26339760	26339897	.	-	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002043;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002043;transcript_name=HG002_chrY_T0002043;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002043:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26339898	26343853	.	-	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002043;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002043;transcript_name=HG002_chrY_T0002043;gene_name=ENSG00000299288;ID=intron:HG002_chrY_T0002043:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26343854	26344016	.	-	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002043;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002043;transcript_name=HG002_chrY_T0002043;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002043:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26344017	26344764	.	-	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002043;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002043;transcript_name=HG002_chrY_T0002043;gene_name=ENSG00000299288;ID=intron:HG002_chrY_T0002043:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26344765	26344862	.	-	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG002_chrY_T0002043;gene_id=HG002_chrY_G0000747;Parent=HG002_chrY_T0002043;transcript_name=HG002_chrY_T0002043;gene_name=ENSG00000299288;ID=exon:HG002_chrY_T0002043:4;Name=ENSG00000299288;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26376229	26378140	.	-	.	source_gene_common_name=CDY18P;source_gene=ENSG00000232205.1;gene_id=HG002_chrY_G0000748;gene_biotype=unprocessed_pseudogene;gene_name=CDY18P;gene_sources=liftoff;ID=HG002_chrY_G0000748;Name=CDY18P
HG002_chrY	CAT	transcript	26376229	26378140	1000	-	.	source_transcript=ENST00000438294.1;source_transcript_name=CDY18P-201;source_gene=ENSG00000232205.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232205.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438294.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY18P;transcript_id=HG002_chrY_T0002044;gene_id=HG002_chrY_G0000748;Parent=HG002_chrY_G0000748;transcript_name=HG002_chrY_T0002044;gene_name=CDY18P;ID=HG002_chrY_T0002044;Name=CDY18P
HG002_chrY	CAT	exon	26376229	26377643	.	-	.	source_transcript=ENST00000438294.1;source_transcript_name=CDY18P-201;source_gene=ENSG00000232205.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232205.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438294.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY18P;transcript_id=HG002_chrY_T0002044;gene_id=HG002_chrY_G0000748;Parent=HG002_chrY_T0002044;transcript_name=HG002_chrY_T0002044;gene_name=CDY18P;ID=exon:HG002_chrY_T0002044:0;Name=CDY18P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26377644	26377946	.	-	.	source_transcript=ENST00000438294.1;source_transcript_name=CDY18P-201;source_gene=ENSG00000232205.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232205.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438294.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY18P;transcript_id=HG002_chrY_T0002044;gene_id=HG002_chrY_G0000748;Parent=HG002_chrY_T0002044;transcript_name=HG002_chrY_T0002044;gene_name=CDY18P;ID=intron:HG002_chrY_T0002044:0;Name=CDY18P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26377947	26378140	.	-	.	source_transcript=ENST00000438294.1;source_transcript_name=CDY18P-201;source_gene=ENSG00000232205.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232205.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438294.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY18P;transcript_id=HG002_chrY_T0002044;gene_id=HG002_chrY_G0000748;Parent=HG002_chrY_T0002044;transcript_name=HG002_chrY_T0002044;gene_name=CDY18P;ID=exon:HG002_chrY_T0002044:1;Name=CDY18P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26391900	26400541	.	+	.	source_gene_common_name=USP9YP31;source_gene=ENSG00000229250.1;gene_id=HG002_chrY_G0000749;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP31;gene_sources=liftoff;ID=HG002_chrY_G0000749;Name=USP9YP31
HG002_chrY	CAT	transcript	26391900	26400541	1000	+	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;transcript_id=HG002_chrY_T0002045;gene_id=HG002_chrY_G0000749;Parent=HG002_chrY_G0000749;transcript_name=HG002_chrY_T0002045;gene_name=USP9YP31;ID=HG002_chrY_T0002045;Name=USP9YP31
HG002_chrY	CAT	exon	26391900	26392121	.	+	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;transcript_id=HG002_chrY_T0002045;gene_id=HG002_chrY_G0000749;Parent=HG002_chrY_T0002045;transcript_name=HG002_chrY_T0002045;gene_name=USP9YP31;ID=exon:HG002_chrY_T0002045:0;Name=USP9YP31;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26392122	26394266	.	+	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;transcript_id=HG002_chrY_T0002045;gene_id=HG002_chrY_G0000749;Parent=HG002_chrY_T0002045;transcript_name=HG002_chrY_T0002045;gene_name=USP9YP31;ID=intron:HG002_chrY_T0002045:0;Name=USP9YP31;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26394267	26394486	.	+	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;transcript_id=HG002_chrY_T0002045;gene_id=HG002_chrY_G0000749;Parent=HG002_chrY_T0002045;transcript_name=HG002_chrY_T0002045;gene_name=USP9YP31;ID=exon:HG002_chrY_T0002045:1;Name=USP9YP31;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26394487	26396284	.	+	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;transcript_id=HG002_chrY_T0002045;gene_id=HG002_chrY_G0000749;Parent=HG002_chrY_T0002045;transcript_name=HG002_chrY_T0002045;gene_name=USP9YP31;ID=intron:HG002_chrY_T0002045:1;Name=USP9YP31;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26396285	26396474	.	+	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;transcript_id=HG002_chrY_T0002045;gene_id=HG002_chrY_G0000749;Parent=HG002_chrY_T0002045;transcript_name=HG002_chrY_T0002045;gene_name=USP9YP31;ID=exon:HG002_chrY_T0002045:2;Name=USP9YP31;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26396475	26398289	.	+	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;transcript_id=HG002_chrY_T0002045;gene_id=HG002_chrY_G0000749;Parent=HG002_chrY_T0002045;transcript_name=HG002_chrY_T0002045;gene_name=USP9YP31;ID=intron:HG002_chrY_T0002045:2;Name=USP9YP31;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26398290	26398418	.	+	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;transcript_id=HG002_chrY_T0002045;gene_id=HG002_chrY_G0000749;Parent=HG002_chrY_T0002045;transcript_name=HG002_chrY_T0002045;gene_name=USP9YP31;ID=exon:HG002_chrY_T0002045:3;Name=USP9YP31;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26398419	26400421	.	+	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;transcript_id=HG002_chrY_T0002045;gene_id=HG002_chrY_G0000749;Parent=HG002_chrY_T0002045;transcript_name=HG002_chrY_T0002045;gene_name=USP9YP31;ID=intron:HG002_chrY_T0002045:3;Name=USP9YP31;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26400422	26400541	.	+	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;transcript_id=HG002_chrY_T0002045;gene_id=HG002_chrY_G0000749;Parent=HG002_chrY_T0002045;transcript_name=HG002_chrY_T0002045;gene_name=USP9YP31;ID=exon:HG002_chrY_T0002045:4;Name=USP9YP31;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26402433	26404446	.	-	.	source_gene_common_name=USP9YP35;source_gene=ENSG00000237467.1;gene_id=HG002_chrY_G0000750;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP35;gene_sources=liftoff;ID=HG002_chrY_G0000750;Name=USP9YP35
HG002_chrY	CAT	transcript	26402433	26404446	1000	-	.	source_transcript=ENST00000435696.1;source_transcript_name=USP9YP35-201;source_gene=ENSG00000237467.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237467.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435696.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP35;transcript_id=HG002_chrY_T0002046;gene_id=HG002_chrY_G0000750;Parent=HG002_chrY_G0000750;transcript_name=HG002_chrY_T0002046;gene_name=USP9YP35;ID=HG002_chrY_T0002046;Name=USP9YP35
HG002_chrY	CAT	exon	26402433	26402622	.	-	.	source_transcript=ENST00000435696.1;source_transcript_name=USP9YP35-201;source_gene=ENSG00000237467.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237467.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP35;transcript_id=HG002_chrY_T0002046;gene_id=HG002_chrY_G0000750;Parent=HG002_chrY_T0002046;transcript_name=HG002_chrY_T0002046;gene_name=USP9YP35;ID=exon:HG002_chrY_T0002046:0;Name=USP9YP35;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26402623	26404224	.	-	.	source_transcript=ENST00000435696.1;source_transcript_name=USP9YP35-201;source_gene=ENSG00000237467.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237467.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP35;transcript_id=HG002_chrY_T0002046;gene_id=HG002_chrY_G0000750;Parent=HG002_chrY_T0002046;transcript_name=HG002_chrY_T0002046;gene_name=USP9YP35;ID=intron:HG002_chrY_T0002046:0;Name=USP9YP35;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26404225	26404446	.	-	.	source_transcript=ENST00000435696.1;source_transcript_name=USP9YP35-201;source_gene=ENSG00000237467.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237467.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP35;transcript_id=HG002_chrY_T0002046;gene_id=HG002_chrY_G0000750;Parent=HG002_chrY_T0002046;transcript_name=HG002_chrY_T0002046;gene_name=USP9YP35;ID=exon:HG002_chrY_T0002046:1;Name=USP9YP35;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26430757	26432366	.	+	.	source_gene_common_name=CDY17P;source_gene=ENSG00000231375.1;gene_id=HG002_chrY_G0000751;gene_biotype=unprocessed_pseudogene;gene_name=CDY17P;gene_sources=liftoff;ID=HG002_chrY_G0000751;Name=CDY17P
HG002_chrY	CAT	transcript	26430757	26432366	1000	+	.	source_transcript=ENST00000414121.1;source_transcript_name=CDY17P-201;source_gene=ENSG00000231375.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231375.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414121.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY17P;transcript_id=HG002_chrY_T0002047;gene_id=HG002_chrY_G0000751;Parent=HG002_chrY_G0000751;transcript_name=HG002_chrY_T0002047;gene_name=CDY17P;ID=HG002_chrY_T0002047;Name=CDY17P
HG002_chrY	CAT	exon	26430757	26430822	.	+	.	source_transcript=ENST00000414121.1;source_transcript_name=CDY17P-201;source_gene=ENSG00000231375.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231375.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414121.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY17P;transcript_id=HG002_chrY_T0002047;gene_id=HG002_chrY_G0000751;Parent=HG002_chrY_T0002047;transcript_name=HG002_chrY_T0002047;gene_name=CDY17P;ID=exon:HG002_chrY_T0002047:0;Name=CDY17P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26430823	26431150	.	+	.	source_transcript=ENST00000414121.1;source_transcript_name=CDY17P-201;source_gene=ENSG00000231375.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231375.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414121.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY17P;transcript_id=HG002_chrY_T0002047;gene_id=HG002_chrY_G0000751;Parent=HG002_chrY_T0002047;transcript_name=HG002_chrY_T0002047;gene_name=CDY17P;ID=intron:HG002_chrY_T0002047:0;Name=CDY17P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26431151	26432366	.	+	.	source_transcript=ENST00000414121.1;source_transcript_name=CDY17P-201;source_gene=ENSG00000231375.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231375.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414121.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY17P;transcript_id=HG002_chrY_T0002047;gene_id=HG002_chrY_G0000751;Parent=HG002_chrY_T0002047;transcript_name=HG002_chrY_T0002047;gene_name=CDY17P;ID=exon:HG002_chrY_T0002047:1;Name=CDY17P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26434225	26437015	.	+	.	source_gene_common_name=CDY1B;source_gene=ENSG00000172352.5;gene_id=HG002_chrY_G0000752;gene_biotype=protein_coding;gene_name=CDY1B;gene_sources=liftoff;ID=HG002_chrY_G0000752;Name=CDY1B
HG002_chrY	CAT	transcript	26434225	26436451	100	+	.	source_transcript=ENST00000382407.1;source_transcript_name=CDY1B-202;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382407.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382407.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG002_chrY_T0002048;gene_id=HG002_chrY_G0000752;Parent=HG002_chrY_G0000752;transcript_name=HG002_chrY_T0002048;gene_name=CDY1B;ID=HG002_chrY_T0002048;Name=CDY1B
HG002_chrY	CAT	exon	26434225	26436451	.	+	.	source_transcript=ENST00000382407.1;source_transcript_name=CDY1B-202;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382407.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382407.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG002_chrY_T0002048;gene_id=HG002_chrY_G0000752;Parent=HG002_chrY_T0002048;transcript_name=HG002_chrY_T0002048;gene_name=CDY1B;ID=exon:HG002_chrY_T0002048:0;Name=CDY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	26434556	26436178	.	+	0	source_transcript=ENST00000382407.1;source_transcript_name=CDY1B-202;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382407.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382407.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG002_chrY_T0002048;gene_id=HG002_chrY_G0000752;Parent=HG002_chrY_T0002048;transcript_name=HG002_chrY_T0002048;gene_name=CDY1B;ID=CDS:HG002_chrY_T0002048:0;Name=CDY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	26434556	26434558	.	+	0	source_transcript=ENST00000382407.1;source_transcript_name=CDY1B-202;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382407.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382407.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG002_chrY_T0002048;gene_id=HG002_chrY_G0000752;Parent=HG002_chrY_T0002048;transcript_name=HG002_chrY_T0002048;gene_name=CDY1B;ID=start_codon:HG002_chrY_T0002048;Name=CDY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	26436176	26436178	.	+	0	source_transcript=ENST00000382407.1;source_transcript_name=CDY1B-202;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382407.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382407.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG002_chrY_T0002048;gene_id=HG002_chrY_G0000752;Parent=HG002_chrY_T0002048;transcript_name=HG002_chrY_T0002048;gene_name=CDY1B;ID=stop_codon:HG002_chrY_T0002048;Name=CDY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	26434275	26437015	100	+	.	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG002_chrY_T0002049;gene_id=HG002_chrY_G0000752;Parent=HG002_chrY_G0000752;transcript_name=HG002_chrY_T0002049;gene_name=CDY1B;ID=HG002_chrY_T0002049;Name=CDY1B
HG002_chrY	CAT	exon	26434275	26436147	.	+	.	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG002_chrY_T0002049;gene_id=HG002_chrY_G0000752;Parent=HG002_chrY_T0002049;transcript_name=HG002_chrY_T0002049;gene_name=CDY1B;ID=exon:HG002_chrY_T0002049:0;Name=CDY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	26434556	26436147	.	+	0	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG002_chrY_T0002049;gene_id=HG002_chrY_G0000752;Parent=HG002_chrY_T0002049;transcript_name=HG002_chrY_T0002049;gene_name=CDY1B;ID=CDS:HG002_chrY_T0002049:0;Name=CDY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	26434556	26434558	.	+	0	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG002_chrY_T0002049;gene_id=HG002_chrY_G0000752;Parent=HG002_chrY_T0002049;transcript_name=HG002_chrY_T0002049;gene_name=CDY1B;ID=start_codon:HG002_chrY_T0002049;Name=CDY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26436148	26436567	.	+	.	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG002_chrY_T0002049;gene_id=HG002_chrY_G0000752;Parent=HG002_chrY_T0002049;transcript_name=HG002_chrY_T0002049;gene_name=CDY1B;ID=intron:HG002_chrY_T0002049:0;Name=CDY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26436568	26437015	.	+	.	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG002_chrY_T0002049;gene_id=HG002_chrY_G0000752;Parent=HG002_chrY_T0002049;transcript_name=HG002_chrY_T0002049;gene_name=CDY1B;ID=exon:HG002_chrY_T0002049:1;Name=CDY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	26436568	26436640	.	+	1	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG002_chrY_T0002049;gene_id=HG002_chrY_G0000752;Parent=HG002_chrY_T0002049;transcript_name=HG002_chrY_T0002049;gene_name=CDY1B;ID=CDS:HG002_chrY_T0002049:1;Name=CDY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	26436638	26436640	.	+	0	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG002_chrY_T0002049;gene_id=HG002_chrY_G0000752;Parent=HG002_chrY_T0002049;transcript_name=HG002_chrY_T0002049;gene_name=CDY1B;ID=stop_codon:HG002_chrY_T0002049;Name=CDY1B;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26475015	26475341	.	+	.	source_gene_common_name=ELOCP34;source_gene=ENSG00000270535.1;alternative_source_transcripts=ENST00000604436.1;gene_id=HG002_chrY_G0000753;gene_biotype=processed_pseudogene;gene_name=ELOCP34;gene_sources=liftoff;ID=HG002_chrY_G0000753;Name=ELOCP34
HG002_chrY	CAT	transcript	26475015	26475341	1000	+	.	source_transcript=ENST00000604436.1;source_transcript_name=ELOCP34-201;source_gene=ENSG00000270535.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270535.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604436.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP34;alternative_source_transcripts=ENST00000604436.1;transcript_id=HG002_chrY_T0002050;gene_id=HG002_chrY_G0000753;Parent=HG002_chrY_G0000753;transcript_name=HG002_chrY_T0002050;gene_name=ELOCP34;ID=HG002_chrY_T0002050;Name=ELOCP34
HG002_chrY	CAT	exon	26475015	26475341	.	+	.	source_transcript=ENST00000604436.1;source_transcript_name=ELOCP34-201;source_gene=ENSG00000270535.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270535.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP34;alternative_source_transcripts=ENST00000604436.1;transcript_id=HG002_chrY_T0002050;gene_id=HG002_chrY_G0000753;Parent=HG002_chrY_T0002050;transcript_name=HG002_chrY_T0002050;gene_name=ELOCP34;ID=exon:HG002_chrY_T0002050:0;Name=ELOCP34;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26487159	26509459	.	-	.	source_gene_common_name=OFD1P12Y;source_gene=ENSG00000232585.1;gene_id=HG002_chrY_G0000754;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P12Y;gene_sources=liftoff;ID=HG002_chrY_G0000754;Name=OFD1P12Y
HG002_chrY	CAT	transcript	26487159	26509459	1000	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG002_chrY_T0002051;gene_id=HG002_chrY_G0000754;Parent=HG002_chrY_G0000754;transcript_name=HG002_chrY_T0002051;gene_name=OFD1P12Y;ID=HG002_chrY_T0002051;Name=OFD1P12Y
HG002_chrY	CAT	exon	26487159	26487307	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG002_chrY_T0002051;gene_id=HG002_chrY_G0000754;Parent=HG002_chrY_T0002051;transcript_name=HG002_chrY_T0002051;gene_name=OFD1P12Y;ID=exon:HG002_chrY_T0002051:0;Name=OFD1P12Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26487308	26488922	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG002_chrY_T0002051;gene_id=HG002_chrY_G0000754;Parent=HG002_chrY_T0002051;transcript_name=HG002_chrY_T0002051;gene_name=OFD1P12Y;ID=intron:HG002_chrY_T0002051:0;Name=OFD1P12Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26488923	26489014	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG002_chrY_T0002051;gene_id=HG002_chrY_G0000754;Parent=HG002_chrY_T0002051;transcript_name=HG002_chrY_T0002051;gene_name=OFD1P12Y;ID=exon:HG002_chrY_T0002051:1;Name=OFD1P12Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26489015	26490119	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG002_chrY_T0002051;gene_id=HG002_chrY_G0000754;Parent=HG002_chrY_T0002051;transcript_name=HG002_chrY_T0002051;gene_name=OFD1P12Y;ID=intron:HG002_chrY_T0002051:1;Name=OFD1P12Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26490120	26490193	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG002_chrY_T0002051;gene_id=HG002_chrY_G0000754;Parent=HG002_chrY_T0002051;transcript_name=HG002_chrY_T0002051;gene_name=OFD1P12Y;ID=exon:HG002_chrY_T0002051:2;Name=OFD1P12Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26490194	26491969	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG002_chrY_T0002051;gene_id=HG002_chrY_G0000754;Parent=HG002_chrY_T0002051;transcript_name=HG002_chrY_T0002051;gene_name=OFD1P12Y;ID=intron:HG002_chrY_T0002051:2;Name=OFD1P12Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26491970	26492082	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG002_chrY_T0002051;gene_id=HG002_chrY_G0000754;Parent=HG002_chrY_T0002051;transcript_name=HG002_chrY_T0002051;gene_name=OFD1P12Y;ID=exon:HG002_chrY_T0002051:3;Name=OFD1P12Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26492083	26494188	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG002_chrY_T0002051;gene_id=HG002_chrY_G0000754;Parent=HG002_chrY_T0002051;transcript_name=HG002_chrY_T0002051;gene_name=OFD1P12Y;ID=intron:HG002_chrY_T0002051:3;Name=OFD1P12Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26494189	26494297	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG002_chrY_T0002051;gene_id=HG002_chrY_G0000754;Parent=HG002_chrY_T0002051;transcript_name=HG002_chrY_T0002051;gene_name=OFD1P12Y;ID=exon:HG002_chrY_T0002051:4;Name=OFD1P12Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26494298	26497341	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG002_chrY_T0002051;gene_id=HG002_chrY_G0000754;Parent=HG002_chrY_T0002051;transcript_name=HG002_chrY_T0002051;gene_name=OFD1P12Y;ID=intron:HG002_chrY_T0002051:4;Name=OFD1P12Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26497342	26497477	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG002_chrY_T0002051;gene_id=HG002_chrY_G0000754;Parent=HG002_chrY_T0002051;transcript_name=HG002_chrY_T0002051;gene_name=OFD1P12Y;ID=exon:HG002_chrY_T0002051:5;Name=OFD1P12Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26497478	26497815	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG002_chrY_T0002051;gene_id=HG002_chrY_G0000754;Parent=HG002_chrY_T0002051;transcript_name=HG002_chrY_T0002051;gene_name=OFD1P12Y;ID=intron:HG002_chrY_T0002051:5;Name=OFD1P12Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26497816	26497949	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG002_chrY_T0002051;gene_id=HG002_chrY_G0000754;Parent=HG002_chrY_T0002051;transcript_name=HG002_chrY_T0002051;gene_name=OFD1P12Y;ID=exon:HG002_chrY_T0002051:6;Name=OFD1P12Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26497950	26505452	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG002_chrY_T0002051;gene_id=HG002_chrY_G0000754;Parent=HG002_chrY_T0002051;transcript_name=HG002_chrY_T0002051;gene_name=OFD1P12Y;ID=intron:HG002_chrY_T0002051:6;Name=OFD1P12Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26505453	26505485	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG002_chrY_T0002051;gene_id=HG002_chrY_G0000754;Parent=HG002_chrY_T0002051;transcript_name=HG002_chrY_T0002051;gene_name=OFD1P12Y;ID=exon:HG002_chrY_T0002051:7;Name=OFD1P12Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26505486	26505570	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG002_chrY_T0002051;gene_id=HG002_chrY_G0000754;Parent=HG002_chrY_T0002051;transcript_name=HG002_chrY_T0002051;gene_name=OFD1P12Y;ID=intron:HG002_chrY_T0002051:7;Name=OFD1P12Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26505571	26505638	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG002_chrY_T0002051;gene_id=HG002_chrY_G0000754;Parent=HG002_chrY_T0002051;transcript_name=HG002_chrY_T0002051;gene_name=OFD1P12Y;ID=exon:HG002_chrY_T0002051:8;Name=OFD1P12Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26505639	26507845	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG002_chrY_T0002051;gene_id=HG002_chrY_G0000754;Parent=HG002_chrY_T0002051;transcript_name=HG002_chrY_T0002051;gene_name=OFD1P12Y;ID=intron:HG002_chrY_T0002051:8;Name=OFD1P12Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26507846	26508045	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG002_chrY_T0002051;gene_id=HG002_chrY_G0000754;Parent=HG002_chrY_T0002051;transcript_name=HG002_chrY_T0002051;gene_name=OFD1P12Y;ID=exon:HG002_chrY_T0002051:9;Name=OFD1P12Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26508046	26509360	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG002_chrY_T0002051;gene_id=HG002_chrY_G0000754;Parent=HG002_chrY_T0002051;transcript_name=HG002_chrY_T0002051;gene_name=OFD1P12Y;ID=intron:HG002_chrY_T0002051:9;Name=OFD1P12Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26509361	26509459	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG002_chrY_T0002051;gene_id=HG002_chrY_G0000754;Parent=HG002_chrY_T0002051;transcript_name=HG002_chrY_T0002051;gene_name=OFD1P12Y;ID=exon:HG002_chrY_T0002051:10;Name=OFD1P12Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26511545	26514675	.	+	.	source_gene_common_name=TRAPPC2P10;source_gene=ENSG00000228465.1;gene_id=HG002_chrY_G0000755;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P10;gene_sources=liftoff;ID=HG002_chrY_G0000755;Name=TRAPPC2P10
HG002_chrY	CAT	transcript	26511545	26514675	1000	+	.	source_transcript=ENST00000415662.1;source_transcript_name=TRAPPC2P10-201;source_gene=ENSG00000228465.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228465.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415662.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P10;transcript_id=HG002_chrY_T0002052;gene_id=HG002_chrY_G0000755;Parent=HG002_chrY_G0000755;transcript_name=HG002_chrY_T0002052;gene_name=TRAPPC2P10;ID=HG002_chrY_T0002052;Name=TRAPPC2P10
HG002_chrY	CAT	exon	26511545	26511656	.	+	.	source_transcript=ENST00000415662.1;source_transcript_name=TRAPPC2P10-201;source_gene=ENSG00000228465.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228465.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415662.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P10;transcript_id=HG002_chrY_T0002052;gene_id=HG002_chrY_G0000755;Parent=HG002_chrY_T0002052;transcript_name=HG002_chrY_T0002052;gene_name=TRAPPC2P10;ID=exon:HG002_chrY_T0002052:0;Name=TRAPPC2P10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26511657	26514020	.	+	.	source_transcript=ENST00000415662.1;source_transcript_name=TRAPPC2P10-201;source_gene=ENSG00000228465.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228465.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415662.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P10;transcript_id=HG002_chrY_T0002052;gene_id=HG002_chrY_G0000755;Parent=HG002_chrY_T0002052;transcript_name=HG002_chrY_T0002052;gene_name=TRAPPC2P10;ID=intron:HG002_chrY_T0002052:0;Name=TRAPPC2P10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26514021	26514152	.	+	.	source_transcript=ENST00000415662.1;source_transcript_name=TRAPPC2P10-201;source_gene=ENSG00000228465.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228465.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415662.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P10;transcript_id=HG002_chrY_T0002052;gene_id=HG002_chrY_G0000755;Parent=HG002_chrY_T0002052;transcript_name=HG002_chrY_T0002052;gene_name=TRAPPC2P10;ID=exon:HG002_chrY_T0002052:1;Name=TRAPPC2P10;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26514153	26514596	.	+	.	source_transcript=ENST00000415662.1;source_transcript_name=TRAPPC2P10-201;source_gene=ENSG00000228465.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228465.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415662.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P10;transcript_id=HG002_chrY_T0002052;gene_id=HG002_chrY_G0000755;Parent=HG002_chrY_T0002052;transcript_name=HG002_chrY_T0002052;gene_name=TRAPPC2P10;ID=intron:HG002_chrY_T0002052:1;Name=TRAPPC2P10;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26514597	26514675	.	+	.	source_transcript=ENST00000415662.1;source_transcript_name=TRAPPC2P10-201;source_gene=ENSG00000228465.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228465.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415662.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P10;transcript_id=HG002_chrY_T0002052;gene_id=HG002_chrY_G0000755;Parent=HG002_chrY_T0002052;transcript_name=HG002_chrY_T0002052;gene_name=TRAPPC2P10;ID=exon:HG002_chrY_T0002052:2;Name=TRAPPC2P10;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26522021	26525670	.	-	.	source_gene_common_name=RAB9AP5;source_gene=ENSG00000231423.1;gene_id=HG002_chrY_G0000756;gene_biotype=unprocessed_pseudogene;gene_name=RAB9AP5;gene_sources=liftoff;ID=HG002_chrY_G0000756;Name=RAB9AP5
HG002_chrY	CAT	transcript	26522021	26525670	1000	-	.	source_transcript=ENST00000437794.1;source_transcript_name=RAB9AP5-201;source_gene=ENSG00000231423.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231423.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437794.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP5;transcript_id=HG002_chrY_T0002053;gene_id=HG002_chrY_G0000756;Parent=HG002_chrY_G0000756;transcript_name=HG002_chrY_T0002053;gene_name=RAB9AP5;ID=HG002_chrY_T0002053;Name=RAB9AP5
HG002_chrY	CAT	exon	26522021	26522389	.	-	.	source_transcript=ENST00000437794.1;source_transcript_name=RAB9AP5-201;source_gene=ENSG00000231423.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231423.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP5;transcript_id=HG002_chrY_T0002053;gene_id=HG002_chrY_G0000756;Parent=HG002_chrY_T0002053;transcript_name=HG002_chrY_T0002053;gene_name=RAB9AP5;ID=exon:HG002_chrY_T0002053:0;Name=RAB9AP5;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26522390	26525442	.	-	.	source_transcript=ENST00000437794.1;source_transcript_name=RAB9AP5-201;source_gene=ENSG00000231423.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231423.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP5;transcript_id=HG002_chrY_T0002053;gene_id=HG002_chrY_G0000756;Parent=HG002_chrY_T0002053;transcript_name=HG002_chrY_T0002053;gene_name=RAB9AP5;ID=intron:HG002_chrY_T0002053:0;Name=RAB9AP5;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26525443	26525670	.	-	.	source_transcript=ENST00000437794.1;source_transcript_name=RAB9AP5-201;source_gene=ENSG00000231423.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231423.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP5;transcript_id=HG002_chrY_T0002053;gene_id=HG002_chrY_G0000756;Parent=HG002_chrY_T0002053;transcript_name=HG002_chrY_T0002053;gene_name=RAB9AP5;ID=exon:HG002_chrY_T0002053:1;Name=RAB9AP5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26529942	26536308	.	+	.	source_gene_common_name=USP9YP12;source_gene=ENSG00000227871.1;gene_id=HG002_chrY_G0000757;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP12;gene_sources=liftoff;ID=HG002_chrY_G0000757;Name=USP9YP12
HG002_chrY	CAT	transcript	26529942	26536308	1000	+	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;transcript_id=HG002_chrY_T0002054;gene_id=HG002_chrY_G0000757;Parent=HG002_chrY_G0000757;transcript_name=HG002_chrY_T0002054;gene_name=USP9YP12;ID=HG002_chrY_T0002054;Name=USP9YP12
HG002_chrY	CAT	exon	26529942	26530073	.	+	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;transcript_id=HG002_chrY_T0002054;gene_id=HG002_chrY_G0000757;Parent=HG002_chrY_T0002054;transcript_name=HG002_chrY_T0002054;gene_name=USP9YP12;ID=exon:HG002_chrY_T0002054:0;Name=USP9YP12;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26530074	26535134	.	+	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;transcript_id=HG002_chrY_T0002054;gene_id=HG002_chrY_G0000757;Parent=HG002_chrY_T0002054;transcript_name=HG002_chrY_T0002054;gene_name=USP9YP12;ID=intron:HG002_chrY_T0002054:0;Name=USP9YP12;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26535135	26535288	.	+	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;transcript_id=HG002_chrY_T0002054;gene_id=HG002_chrY_G0000757;Parent=HG002_chrY_T0002054;transcript_name=HG002_chrY_T0002054;gene_name=USP9YP12;ID=exon:HG002_chrY_T0002054:1;Name=USP9YP12;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26535289	26535643	.	+	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;transcript_id=HG002_chrY_T0002054;gene_id=HG002_chrY_G0000757;Parent=HG002_chrY_T0002054;transcript_name=HG002_chrY_T0002054;gene_name=USP9YP12;ID=intron:HG002_chrY_T0002054:1;Name=USP9YP12;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26535644	26535831	.	+	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;transcript_id=HG002_chrY_T0002054;gene_id=HG002_chrY_G0000757;Parent=HG002_chrY_T0002054;transcript_name=HG002_chrY_T0002054;gene_name=USP9YP12;ID=exon:HG002_chrY_T0002054:2;Name=USP9YP12;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26535832	26536212	.	+	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;transcript_id=HG002_chrY_T0002054;gene_id=HG002_chrY_G0000757;Parent=HG002_chrY_T0002054;transcript_name=HG002_chrY_T0002054;gene_name=USP9YP12;ID=intron:HG002_chrY_T0002054:2;Name=USP9YP12;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26536213	26536308	.	+	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;transcript_id=HG002_chrY_T0002054;gene_id=HG002_chrY_G0000757;Parent=HG002_chrY_T0002054;transcript_name=HG002_chrY_T0002054;gene_name=USP9YP12;ID=exon:HG002_chrY_T0002054:3;Name=USP9YP12;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26535464	26535617	.	+	.	source_gene_common_name=RNU1-86P;source_gene=ENSG00000251917.1;alternative_source_transcripts=ENST00000516617.1;gene_id=HG002_chrY_G0000758;gene_biotype=snRNA;gene_name=RNU1-86P;gene_sources=liftoff;ID=HG002_chrY_G0000758;Name=RNU1-86P
HG002_chrY	CAT	transcript	26535464	26535617	1000	+	.	source_transcript=ENST00000516108.1;source_transcript_name=RNU1-86P-201;source_gene=ENSG00000251917.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000251917.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516108.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516108.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-86P;alternative_source_transcripts=ENST00000516617.1;transcript_id=HG002_chrY_T0002055;gene_id=HG002_chrY_G0000758;Parent=HG002_chrY_G0000758;transcript_name=HG002_chrY_T0002055;gene_name=RNU1-86P;ID=HG002_chrY_T0002055;Name=RNU1-86P
HG002_chrY	CAT	exon	26535464	26535617	.	+	.	source_transcript=ENST00000516108.1;source_transcript_name=RNU1-86P-201;source_gene=ENSG00000251917.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000251917.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516108.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516108.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-86P;alternative_source_transcripts=ENST00000516617.1;transcript_id=HG002_chrY_T0002055;gene_id=HG002_chrY_G0000758;Parent=HG002_chrY_T0002055;transcript_name=HG002_chrY_T0002055;gene_name=RNU1-86P;ID=exon:HG002_chrY_T0002055:0;Name=RNU1-86P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26540612	26545507	.	+	.	source_gene_common_name=TTTY3B;source_gene=ENSG00000280961.1;alternative_source_transcripts=ENST00000417334.1;gene_id=HG002_chrY_G0000759;gene_biotype=lncRNA;gene_name=TTTY3B;gene_sources=liftoff;ID=HG002_chrY_G0000759;Name=TTTY3B
HG002_chrY	CAT	transcript	26540612	26545507	1000	+	.	source_transcript=ENST00000631331.1;source_transcript_name=TTTY3B-201;source_gene=ENSG00000280961.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000280961.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000631331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000631331.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=ENST00000417334.1;transcript_id=HG002_chrY_T0002056;gene_id=HG002_chrY_G0000759;Parent=HG002_chrY_G0000759;transcript_name=HG002_chrY_T0002056;gene_name=TTTY3B;ID=HG002_chrY_T0002056;Name=TTTY3B
HG002_chrY	CAT	exon	26540612	26540715	.	+	.	source_transcript=ENST00000631331.1;source_transcript_name=TTTY3B-201;source_gene=ENSG00000280961.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000280961.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000631331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000631331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=ENST00000417334.1;transcript_id=HG002_chrY_T0002056;gene_id=HG002_chrY_G0000759;Parent=HG002_chrY_T0002056;transcript_name=HG002_chrY_T0002056;gene_name=TTTY3B;ID=exon:HG002_chrY_T0002056:0;Name=TTTY3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26540716	26542913	.	+	.	source_transcript=ENST00000631331.1;source_transcript_name=TTTY3B-201;source_gene=ENSG00000280961.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000280961.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000631331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000631331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=ENST00000417334.1;transcript_id=HG002_chrY_T0002056;gene_id=HG002_chrY_G0000759;Parent=HG002_chrY_T0002056;transcript_name=HG002_chrY_T0002056;gene_name=TTTY3B;ID=intron:HG002_chrY_T0002056:0;Name=TTTY3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26542914	26543048	.	+	.	source_transcript=ENST00000631331.1;source_transcript_name=TTTY3B-201;source_gene=ENSG00000280961.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000280961.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000631331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000631331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=ENST00000417334.1;transcript_id=HG002_chrY_T0002056;gene_id=HG002_chrY_G0000759;Parent=HG002_chrY_T0002056;transcript_name=HG002_chrY_T0002056;gene_name=TTTY3B;ID=exon:HG002_chrY_T0002056:1;Name=TTTY3B;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26543049	26545402	.	+	.	source_transcript=ENST00000631331.1;source_transcript_name=TTTY3B-201;source_gene=ENSG00000280961.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000280961.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000631331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000631331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=ENST00000417334.1;transcript_id=HG002_chrY_T0002056;gene_id=HG002_chrY_G0000759;Parent=HG002_chrY_T0002056;transcript_name=HG002_chrY_T0002056;gene_name=TTTY3B;ID=intron:HG002_chrY_T0002056:1;Name=TTTY3B;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26545403	26545507	.	+	.	source_transcript=ENST00000631331.1;source_transcript_name=TTTY3B-201;source_gene=ENSG00000280961.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000280961.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000631331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000631331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=ENST00000417334.1;transcript_id=HG002_chrY_T0002056;gene_id=HG002_chrY_G0000759;Parent=HG002_chrY_T0002056;transcript_name=HG002_chrY_T0002056;gene_name=TTTY3B;ID=exon:HG002_chrY_T0002056:2;Name=TTTY3B;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26542133	26547281	.	-	.	source_gene_common_name=USP9YP11;source_gene=ENSG00000226369.1;gene_id=HG002_chrY_G0000760;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP11;gene_sources=liftoff;ID=HG002_chrY_G0000760;Name=USP9YP11
HG002_chrY	CAT	transcript	26542133	26547281	1000	-	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;transcript_id=HG002_chrY_T0002057;gene_id=HG002_chrY_G0000760;Parent=HG002_chrY_G0000760;transcript_name=HG002_chrY_T0002057;gene_name=USP9YP11;ID=HG002_chrY_T0002057;Name=USP9YP11
HG002_chrY	CAT	exon	26542133	26542323	.	-	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;transcript_id=HG002_chrY_T0002057;gene_id=HG002_chrY_G0000760;Parent=HG002_chrY_T0002057;transcript_name=HG002_chrY_T0002057;gene_name=USP9YP11;ID=exon:HG002_chrY_T0002057:0;Name=USP9YP11;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26542324	26543958	.	-	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;transcript_id=HG002_chrY_T0002057;gene_id=HG002_chrY_G0000760;Parent=HG002_chrY_T0002057;transcript_name=HG002_chrY_T0002057;gene_name=USP9YP11;ID=intron:HG002_chrY_T0002057:0;Name=USP9YP11;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26543959	26544221	.	-	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;transcript_id=HG002_chrY_T0002057;gene_id=HG002_chrY_G0000760;Parent=HG002_chrY_T0002057;transcript_name=HG002_chrY_T0002057;gene_name=USP9YP11;ID=exon:HG002_chrY_T0002057:1;Name=USP9YP11;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26544222	26545344	.	-	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;transcript_id=HG002_chrY_T0002057;gene_id=HG002_chrY_G0000760;Parent=HG002_chrY_T0002057;transcript_name=HG002_chrY_T0002057;gene_name=USP9YP11;ID=intron:HG002_chrY_T0002057:1;Name=USP9YP11;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26545345	26545568	.	-	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;transcript_id=HG002_chrY_T0002057;gene_id=HG002_chrY_G0000760;Parent=HG002_chrY_T0002057;transcript_name=HG002_chrY_T0002057;gene_name=USP9YP11;ID=exon:HG002_chrY_T0002057:2;Name=USP9YP11;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26545569	26547242	.	-	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;transcript_id=HG002_chrY_T0002057;gene_id=HG002_chrY_G0000760;Parent=HG002_chrY_T0002057;transcript_name=HG002_chrY_T0002057;gene_name=USP9YP11;ID=intron:HG002_chrY_T0002057:2;Name=USP9YP11;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26547243	26547281	.	-	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;transcript_id=HG002_chrY_T0002057;gene_id=HG002_chrY_G0000760;Parent=HG002_chrY_T0002057;transcript_name=HG002_chrY_T0002057;gene_name=USP9YP11;ID=exon:HG002_chrY_T0002057:3;Name=USP9YP11;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26560716	26562321	.	-	.	source_gene_common_name=USP9YP13;source_gene=ENSG00000224571.1;gene_id=HG002_chrY_G0000761;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP13;gene_sources=liftoff;ID=HG002_chrY_G0000761;Name=USP9YP13
HG002_chrY	CAT	transcript	26560716	26562321	1000	-	.	source_transcript=ENST00000417797.1;source_transcript_name=USP9YP13-201;source_gene=ENSG00000224571.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224571.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417797.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP13;transcript_id=HG002_chrY_T0002058;gene_id=HG002_chrY_G0000761;Parent=HG002_chrY_G0000761;transcript_name=HG002_chrY_T0002058;gene_name=USP9YP13;ID=HG002_chrY_T0002058;Name=USP9YP13
HG002_chrY	CAT	exon	26560716	26560975	.	-	.	source_transcript=ENST00000417797.1;source_transcript_name=USP9YP13-201;source_gene=ENSG00000224571.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224571.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP13;transcript_id=HG002_chrY_T0002058;gene_id=HG002_chrY_G0000761;Parent=HG002_chrY_T0002058;transcript_name=HG002_chrY_T0002058;gene_name=USP9YP13;ID=exon:HG002_chrY_T0002058:0;Name=USP9YP13;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26560976	26562101	.	-	.	source_transcript=ENST00000417797.1;source_transcript_name=USP9YP13-201;source_gene=ENSG00000224571.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224571.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP13;transcript_id=HG002_chrY_T0002058;gene_id=HG002_chrY_G0000761;Parent=HG002_chrY_T0002058;transcript_name=HG002_chrY_T0002058;gene_name=USP9YP13;ID=intron:HG002_chrY_T0002058:0;Name=USP9YP13;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26562102	26562321	.	-	.	source_transcript=ENST00000417797.1;source_transcript_name=USP9YP13-201;source_gene=ENSG00000224571.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224571.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP13;transcript_id=HG002_chrY_T0002058;gene_id=HG002_chrY_G0000761;Parent=HG002_chrY_T0002058;transcript_name=HG002_chrY_T0002058;gene_name=USP9YP13;ID=exon:HG002_chrY_T0002058:1;Name=USP9YP13;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26564503	26564985	.	+	.	source_gene_common_name=XKRYP5;source_gene=ENSG00000223406.1;alternative_source_transcripts=ENST00000449659.1;gene_id=HG002_chrY_G0000762;gene_biotype=unprocessed_pseudogene;gene_name=XKRYP5;gene_sources=liftoff;ID=HG002_chrY_G0000762;Name=XKRYP5
HG002_chrY	CAT	transcript	26564503	26564985	1000	+	.	source_transcript=ENST00000449659.1;source_transcript_name=XKRYP5-201;source_gene=ENSG00000223406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449659.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP5;alternative_source_transcripts=ENST00000449659.1;transcript_id=HG002_chrY_T0002059;gene_id=HG002_chrY_G0000762;Parent=HG002_chrY_G0000762;transcript_name=HG002_chrY_T0002059;gene_name=XKRYP5;ID=HG002_chrY_T0002059;Name=XKRYP5
HG002_chrY	CAT	exon	26564503	26564985	.	+	.	source_transcript=ENST00000449659.1;source_transcript_name=XKRYP5-201;source_gene=ENSG00000223406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP5;alternative_source_transcripts=ENST00000449659.1;transcript_id=HG002_chrY_T0002059;gene_id=HG002_chrY_G0000762;Parent=HG002_chrY_T0002059;transcript_name=HG002_chrY_T0002059;gene_name=XKRYP5;ID=exon:HG002_chrY_T0002059:0;Name=XKRYP5;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26625133	26626702	.	+	.	source_gene_common_name=CDY15P;source_gene=ENSG00000223362.1;gene_id=HG002_chrY_G0000763;gene_biotype=unprocessed_pseudogene;gene_name=CDY15P;gene_sources=liftoff;ID=HG002_chrY_G0000763;Name=CDY15P
HG002_chrY	CAT	transcript	26625133	26626702	1000	+	.	source_transcript=ENST00000421995.1;source_transcript_name=CDY15P-201;source_gene=ENSG00000223362.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223362.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421995.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY15P;transcript_id=HG002_chrY_T0002060;gene_id=HG002_chrY_G0000763;Parent=HG002_chrY_G0000763;transcript_name=HG002_chrY_T0002060;gene_name=CDY15P;ID=HG002_chrY_T0002060;Name=CDY15P
HG002_chrY	CAT	exon	26625133	26626702	.	+	.	source_transcript=ENST00000421995.1;source_transcript_name=CDY15P-201;source_gene=ENSG00000223362.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223362.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY15P;transcript_id=HG002_chrY_T0002060;gene_id=HG002_chrY_G0000763;Parent=HG002_chrY_T0002060;transcript_name=HG002_chrY_T0002060;gene_name=CDY15P;ID=exon:HG002_chrY_T0002060:0;Name=CDY15P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26673160	26673398	.	+	.	source_gene_common_name=ELOCP9;source_gene=ENSG00000231540.1;gene_id=HG002_chrY_G0000764;gene_biotype=processed_pseudogene;gene_name=ELOCP9;gene_sources=liftoff;ID=HG002_chrY_G0000764;Name=ELOCP9
HG002_chrY	CAT	transcript	26673160	26673398	1000	+	.	source_transcript=ENST00000418624.1;source_transcript_name=ELOCP9-201;source_gene=ENSG00000231540.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000231540.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418624.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP9;transcript_id=HG002_chrY_T0002061;gene_id=HG002_chrY_G0000764;Parent=HG002_chrY_G0000764;transcript_name=HG002_chrY_T0002061;gene_name=ELOCP9;ID=HG002_chrY_T0002061;Name=ELOCP9
HG002_chrY	CAT	exon	26673160	26673398	.	+	.	source_transcript=ENST00000418624.1;source_transcript_name=ELOCP9-201;source_gene=ENSG00000231540.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000231540.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP9;transcript_id=HG002_chrY_T0002061;gene_id=HG002_chrY_G0000764;Parent=HG002_chrY_T0002061;transcript_name=HG002_chrY_T0002061;gene_name=ELOCP9;ID=exon:HG002_chrY_T0002061:0;Name=ELOCP9;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26684069	26710999	.	-	.	source_gene_common_name=OFD1P11Y;source_gene=ENSG00000237302.1;gene_id=HG002_chrY_G0000765;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P11Y;gene_sources=liftoff;ID=HG002_chrY_G0000765;Name=OFD1P11Y
HG002_chrY	CAT	transcript	26684069	26710999	1000	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG002_chrY_T0002062;gene_id=HG002_chrY_G0000765;Parent=HG002_chrY_G0000765;transcript_name=HG002_chrY_T0002062;gene_name=OFD1P11Y;ID=HG002_chrY_T0002062;Name=OFD1P11Y
HG002_chrY	CAT	exon	26684069	26684140	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG002_chrY_T0002062;gene_id=HG002_chrY_G0000765;Parent=HG002_chrY_T0002062;transcript_name=HG002_chrY_T0002062;gene_name=OFD1P11Y;ID=exon:HG002_chrY_T0002062:0;Name=OFD1P11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26684141	26685242	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG002_chrY_T0002062;gene_id=HG002_chrY_G0000765;Parent=HG002_chrY_T0002062;transcript_name=HG002_chrY_T0002062;gene_name=OFD1P11Y;ID=intron:HG002_chrY_T0002062:0;Name=OFD1P11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26685243	26685316	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG002_chrY_T0002062;gene_id=HG002_chrY_G0000765;Parent=HG002_chrY_T0002062;transcript_name=HG002_chrY_T0002062;gene_name=OFD1P11Y;ID=exon:HG002_chrY_T0002062:1;Name=OFD1P11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26685317	26687102	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG002_chrY_T0002062;gene_id=HG002_chrY_G0000765;Parent=HG002_chrY_T0002062;transcript_name=HG002_chrY_T0002062;gene_name=OFD1P11Y;ID=intron:HG002_chrY_T0002062:1;Name=OFD1P11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26687103	26687221	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG002_chrY_T0002062;gene_id=HG002_chrY_G0000765;Parent=HG002_chrY_T0002062;transcript_name=HG002_chrY_T0002062;gene_name=OFD1P11Y;ID=exon:HG002_chrY_T0002062:2;Name=OFD1P11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26687222	26689869	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG002_chrY_T0002062;gene_id=HG002_chrY_G0000765;Parent=HG002_chrY_T0002062;transcript_name=HG002_chrY_T0002062;gene_name=OFD1P11Y;ID=intron:HG002_chrY_T0002062:2;Name=OFD1P11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26689870	26689976	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG002_chrY_T0002062;gene_id=HG002_chrY_G0000765;Parent=HG002_chrY_T0002062;transcript_name=HG002_chrY_T0002062;gene_name=OFD1P11Y;ID=exon:HG002_chrY_T0002062:3;Name=OFD1P11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26689977	26693022	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG002_chrY_T0002062;gene_id=HG002_chrY_G0000765;Parent=HG002_chrY_T0002062;transcript_name=HG002_chrY_T0002062;gene_name=OFD1P11Y;ID=intron:HG002_chrY_T0002062:3;Name=OFD1P11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26693023	26693168	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG002_chrY_T0002062;gene_id=HG002_chrY_G0000765;Parent=HG002_chrY_T0002062;transcript_name=HG002_chrY_T0002062;gene_name=OFD1P11Y;ID=exon:HG002_chrY_T0002062:4;Name=OFD1P11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26693169	26693512	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG002_chrY_T0002062;gene_id=HG002_chrY_G0000765;Parent=HG002_chrY_T0002062;transcript_name=HG002_chrY_T0002062;gene_name=OFD1P11Y;ID=intron:HG002_chrY_T0002062:4;Name=OFD1P11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26693513	26693647	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG002_chrY_T0002062;gene_id=HG002_chrY_G0000765;Parent=HG002_chrY_T0002062;transcript_name=HG002_chrY_T0002062;gene_name=OFD1P11Y;ID=exon:HG002_chrY_T0002062:5;Name=OFD1P11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26693648	26697493	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG002_chrY_T0002062;gene_id=HG002_chrY_G0000765;Parent=HG002_chrY_T0002062;transcript_name=HG002_chrY_T0002062;gene_name=OFD1P11Y;ID=intron:HG002_chrY_T0002062:5;Name=OFD1P11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26697494	26697617	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG002_chrY_T0002062;gene_id=HG002_chrY_G0000765;Parent=HG002_chrY_T0002062;transcript_name=HG002_chrY_T0002062;gene_name=OFD1P11Y;ID=exon:HG002_chrY_T0002062:6;Name=OFD1P11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26697618	26698407	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG002_chrY_T0002062;gene_id=HG002_chrY_G0000765;Parent=HG002_chrY_T0002062;transcript_name=HG002_chrY_T0002062;gene_name=OFD1P11Y;ID=intron:HG002_chrY_T0002062:6;Name=OFD1P11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26698408	26698438	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG002_chrY_T0002062;gene_id=HG002_chrY_G0000765;Parent=HG002_chrY_T0002062;transcript_name=HG002_chrY_T0002062;gene_name=OFD1P11Y;ID=exon:HG002_chrY_T0002062:7;Name=OFD1P11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26698439	26698522	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG002_chrY_T0002062;gene_id=HG002_chrY_G0000765;Parent=HG002_chrY_T0002062;transcript_name=HG002_chrY_T0002062;gene_name=OFD1P11Y;ID=intron:HG002_chrY_T0002062:7;Name=OFD1P11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26698523	26698591	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG002_chrY_T0002062;gene_id=HG002_chrY_G0000765;Parent=HG002_chrY_T0002062;transcript_name=HG002_chrY_T0002062;gene_name=OFD1P11Y;ID=exon:HG002_chrY_T0002062:8;Name=OFD1P11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26698592	26709281	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG002_chrY_T0002062;gene_id=HG002_chrY_G0000765;Parent=HG002_chrY_T0002062;transcript_name=HG002_chrY_T0002062;gene_name=OFD1P11Y;ID=intron:HG002_chrY_T0002062:8;Name=OFD1P11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26709282	26709483	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG002_chrY_T0002062;gene_id=HG002_chrY_G0000765;Parent=HG002_chrY_T0002062;transcript_name=HG002_chrY_T0002062;gene_name=OFD1P11Y;ID=exon:HG002_chrY_T0002062:9;Name=OFD1P11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26709484	26710901	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG002_chrY_T0002062;gene_id=HG002_chrY_G0000765;Parent=HG002_chrY_T0002062;transcript_name=HG002_chrY_T0002062;gene_name=OFD1P11Y;ID=intron:HG002_chrY_T0002062:9;Name=OFD1P11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26710902	26710999	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG002_chrY_T0002062;gene_id=HG002_chrY_G0000765;Parent=HG002_chrY_T0002062;transcript_name=HG002_chrY_T0002062;gene_name=OFD1P11Y;ID=exon:HG002_chrY_T0002062:10;Name=OFD1P11Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26716648	26719393	.	+	.	source_gene_common_name=TRAPPC2P9;source_gene=ENSG00000232845.1;gene_id=HG002_chrY_G0000766;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P9;gene_sources=liftoff;ID=HG002_chrY_G0000766;Name=TRAPPC2P9
HG002_chrY	CAT	transcript	26716648	26719393	1000	+	.	source_transcript=ENST00000434556.1;source_transcript_name=TRAPPC2P9-201;source_gene=ENSG00000232845.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232845.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434556.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434556.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P9;transcript_id=HG002_chrY_T0002063;gene_id=HG002_chrY_G0000766;Parent=HG002_chrY_G0000766;transcript_name=HG002_chrY_T0002063;gene_name=TRAPPC2P9;ID=HG002_chrY_T0002063;Name=TRAPPC2P9
HG002_chrY	CAT	exon	26716648	26716759	.	+	.	source_transcript=ENST00000434556.1;source_transcript_name=TRAPPC2P9-201;source_gene=ENSG00000232845.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232845.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434556.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P9;transcript_id=HG002_chrY_T0002063;gene_id=HG002_chrY_G0000766;Parent=HG002_chrY_T0002063;transcript_name=HG002_chrY_T0002063;gene_name=TRAPPC2P9;ID=exon:HG002_chrY_T0002063:0;Name=TRAPPC2P9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26716760	26718713	.	+	.	source_transcript=ENST00000434556.1;source_transcript_name=TRAPPC2P9-201;source_gene=ENSG00000232845.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232845.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434556.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P9;transcript_id=HG002_chrY_T0002063;gene_id=HG002_chrY_G0000766;Parent=HG002_chrY_T0002063;transcript_name=HG002_chrY_T0002063;gene_name=TRAPPC2P9;ID=intron:HG002_chrY_T0002063:0;Name=TRAPPC2P9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26718714	26718858	.	+	.	source_transcript=ENST00000434556.1;source_transcript_name=TRAPPC2P9-201;source_gene=ENSG00000232845.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232845.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434556.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P9;transcript_id=HG002_chrY_T0002063;gene_id=HG002_chrY_G0000766;Parent=HG002_chrY_T0002063;transcript_name=HG002_chrY_T0002063;gene_name=TRAPPC2P9;ID=exon:HG002_chrY_T0002063:1;Name=TRAPPC2P9;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26718859	26719307	.	+	.	source_transcript=ENST00000434556.1;source_transcript_name=TRAPPC2P9-201;source_gene=ENSG00000232845.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232845.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434556.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P9;transcript_id=HG002_chrY_T0002063;gene_id=HG002_chrY_G0000766;Parent=HG002_chrY_T0002063;transcript_name=HG002_chrY_T0002063;gene_name=TRAPPC2P9;ID=intron:HG002_chrY_T0002063:1;Name=TRAPPC2P9;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26719308	26719393	.	+	.	source_transcript=ENST00000434556.1;source_transcript_name=TRAPPC2P9-201;source_gene=ENSG00000232845.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232845.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434556.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P9;transcript_id=HG002_chrY_T0002063;gene_id=HG002_chrY_G0000766;Parent=HG002_chrY_T0002063;transcript_name=HG002_chrY_T0002063;gene_name=TRAPPC2P9;ID=exon:HG002_chrY_T0002063:2;Name=TRAPPC2P9;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26730471	26731043	.	-	.	source_gene_common_name=RAB9AP1;source_gene=ENSG00000232910.1;alternative_source_transcripts=ENST00000412737.1;gene_id=HG002_chrY_G0000767;gene_biotype=unprocessed_pseudogene;gene_name=RAB9AP1;gene_sources=liftoff;ID=HG002_chrY_G0000767;Name=RAB9AP1
HG002_chrY	CAT	transcript	26730471	26731043	1000	-	.	source_transcript=ENST00000449393.1;source_transcript_name=RAB9AP1-201;source_gene=ENSG00000232910.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232910.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449393.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP1;alternative_source_transcripts=ENST00000412737.1;transcript_id=HG002_chrY_T0002064;gene_id=HG002_chrY_G0000767;Parent=HG002_chrY_G0000767;transcript_name=HG002_chrY_T0002064;gene_name=RAB9AP1;ID=HG002_chrY_T0002064;Name=RAB9AP1
HG002_chrY	CAT	exon	26730471	26731043	.	-	.	source_transcript=ENST00000449393.1;source_transcript_name=RAB9AP1-201;source_gene=ENSG00000232910.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232910.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449393.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP1;alternative_source_transcripts=ENST00000412737.1;transcript_id=HG002_chrY_T0002064;gene_id=HG002_chrY_G0000767;Parent=HG002_chrY_T0002064;transcript_name=HG002_chrY_T0002064;gene_name=RAB9AP1;ID=exon:HG002_chrY_T0002064:0;Name=RAB9AP1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26735538	26741977	.	+	.	source_gene_common_name=USP9YP29;source_gene=ENSG00000232424.1;gene_id=HG002_chrY_G0000768;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP29;gene_sources=liftoff;ID=HG002_chrY_G0000768;Name=USP9YP29
HG002_chrY	CAT	transcript	26735538	26741977	1000	+	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=HG002_chrY_T0002065;gene_id=HG002_chrY_G0000768;Parent=HG002_chrY_G0000768;transcript_name=HG002_chrY_T0002065;gene_name=USP9YP29;ID=HG002_chrY_T0002065;Name=USP9YP29
HG002_chrY	CAT	exon	26735538	26735665	.	+	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=HG002_chrY_T0002065;gene_id=HG002_chrY_G0000768;Parent=HG002_chrY_T0002065;transcript_name=HG002_chrY_T0002065;gene_name=USP9YP29;ID=exon:HG002_chrY_T0002065:0;Name=USP9YP29;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26735666	26740801	.	+	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=HG002_chrY_T0002065;gene_id=HG002_chrY_G0000768;Parent=HG002_chrY_T0002065;transcript_name=HG002_chrY_T0002065;gene_name=USP9YP29;ID=intron:HG002_chrY_T0002065:0;Name=USP9YP29;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26740802	26740951	.	+	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=HG002_chrY_T0002065;gene_id=HG002_chrY_G0000768;Parent=HG002_chrY_T0002065;transcript_name=HG002_chrY_T0002065;gene_name=USP9YP29;ID=exon:HG002_chrY_T0002065:1;Name=USP9YP29;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26740952	26741100	.	+	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=HG002_chrY_T0002065;gene_id=HG002_chrY_G0000768;Parent=HG002_chrY_T0002065;transcript_name=HG002_chrY_T0002065;gene_name=USP9YP29;ID=intron:HG002_chrY_T0002065:1;Name=USP9YP29;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26741101	26741130	.	+	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=HG002_chrY_T0002065;gene_id=HG002_chrY_G0000768;Parent=HG002_chrY_T0002065;transcript_name=HG002_chrY_T0002065;gene_name=USP9YP29;ID=exon:HG002_chrY_T0002065:2;Name=USP9YP29;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26741131	26741340	.	+	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=HG002_chrY_T0002065;gene_id=HG002_chrY_G0000768;Parent=HG002_chrY_T0002065;transcript_name=HG002_chrY_T0002065;gene_name=USP9YP29;ID=intron:HG002_chrY_T0002065:2;Name=USP9YP29;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26741341	26741499	.	+	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=HG002_chrY_T0002065;gene_id=HG002_chrY_G0000768;Parent=HG002_chrY_T0002065;transcript_name=HG002_chrY_T0002065;gene_name=USP9YP29;ID=exon:HG002_chrY_T0002065:3;Name=USP9YP29;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26741500	26741881	.	+	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=HG002_chrY_T0002065;gene_id=HG002_chrY_G0000768;Parent=HG002_chrY_T0002065;transcript_name=HG002_chrY_T0002065;gene_name=USP9YP29;ID=intron:HG002_chrY_T0002065:3;Name=USP9YP29;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26741882	26741977	.	+	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=HG002_chrY_T0002065;gene_id=HG002_chrY_G0000768;Parent=HG002_chrY_T0002065;transcript_name=HG002_chrY_T0002065;gene_name=USP9YP29;ID=exon:HG002_chrY_T0002065:4;Name=USP9YP29;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26741130	26741293	.	+	.	source_gene_common_name=RNU1-97P;source_gene=ENSG00000252681.1;gene_id=HG002_chrY_G0000769;gene_biotype=snRNA;gene_name=RNU1-97P;gene_sources=liftoff;ID=HG002_chrY_G0000769;Name=RNU1-97P
HG002_chrY	CAT	transcript	26741130	26741293	1000	+	.	source_transcript=ENST00000516872.1;source_transcript_name=RNU1-97P-201;source_gene=ENSG00000252681.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252681.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516872.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516872.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-97P;transcript_id=HG002_chrY_T0002066;gene_id=HG002_chrY_G0000769;Parent=HG002_chrY_G0000769;transcript_name=HG002_chrY_T0002066;gene_name=RNU1-97P;ID=HG002_chrY_T0002066;Name=RNU1-97P
HG002_chrY	CAT	exon	26741130	26741293	.	+	.	source_transcript=ENST00000516872.1;source_transcript_name=RNU1-97P-201;source_gene=ENSG00000252681.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252681.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516872.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516872.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-97P;transcript_id=HG002_chrY_T0002066;gene_id=HG002_chrY_G0000769;Parent=HG002_chrY_T0002066;transcript_name=HG002_chrY_T0002066;gene_name=RNU1-97P;ID=exon:HG002_chrY_T0002066:0;Name=RNU1-97P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26745982	26748038	.	-	.	source_gene_common_name=USP9YP25;source_gene=ENSG00000224866.1;gene_id=HG002_chrY_G0000770;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP25;gene_sources=liftoff;ID=HG002_chrY_G0000770;Name=USP9YP25
HG002_chrY	CAT	transcript	26745982	26748038	1000	-	.	source_transcript=ENST00000457708.1;source_transcript_name=USP9YP25-201;source_gene=ENSG00000224866.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224866.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457708.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP25;transcript_id=HG002_chrY_T0002067;gene_id=HG002_chrY_G0000770;Parent=HG002_chrY_G0000770;transcript_name=HG002_chrY_T0002067;gene_name=USP9YP25;ID=HG002_chrY_T0002067;Name=USP9YP25
HG002_chrY	CAT	exon	26745982	26746173	.	-	.	source_transcript=ENST00000457708.1;source_transcript_name=USP9YP25-201;source_gene=ENSG00000224866.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224866.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP25;transcript_id=HG002_chrY_T0002067;gene_id=HG002_chrY_G0000770;Parent=HG002_chrY_T0002067;transcript_name=HG002_chrY_T0002067;gene_name=USP9YP25;ID=exon:HG002_chrY_T0002067:0;Name=USP9YP25;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26746174	26747787	.	-	.	source_transcript=ENST00000457708.1;source_transcript_name=USP9YP25-201;source_gene=ENSG00000224866.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224866.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP25;transcript_id=HG002_chrY_T0002067;gene_id=HG002_chrY_G0000770;Parent=HG002_chrY_T0002067;transcript_name=HG002_chrY_T0002067;gene_name=USP9YP25;ID=intron:HG002_chrY_T0002067:0;Name=USP9YP25;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26747788	26748038	.	-	.	source_transcript=ENST00000457708.1;source_transcript_name=USP9YP25-201;source_gene=ENSG00000224866.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224866.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP25;transcript_id=HG002_chrY_T0002067;gene_id=HG002_chrY_G0000770;Parent=HG002_chrY_T0002067;transcript_name=HG002_chrY_T0002067;gene_name=USP9YP25;ID=exon:HG002_chrY_T0002067:1;Name=USP9YP25;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26755423	26766309	.	+	.	source_gene_common_name=XKRYP3;source_gene=ENSG00000236620.1;alternative_source_transcripts=ENST00000440468.1;gene_id=HG002_chrY_G0000771;gene_biotype=unprocessed_pseudogene;gene_name=XKRYP3;gene_sources=liftoff;ID=HG002_chrY_G0000771;Name=XKRYP3
HG002_chrY	CAT	transcript	26755423	26766309	1000	+	.	source_transcript=ENST00000442113.1;source_transcript_name=XKRYP3-201;source_gene=ENSG00000236620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442113.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP3;alternative_source_transcripts=ENST00000440468.1;transcript_id=HG002_chrY_T0002068;gene_id=HG002_chrY_G0000771;Parent=HG002_chrY_G0000771;transcript_name=HG002_chrY_T0002068;gene_name=XKRYP3;ID=HG002_chrY_T0002068;Name=XKRYP3
HG002_chrY	CAT	exon	26755423	26755758	.	+	.	source_transcript=ENST00000442113.1;source_transcript_name=XKRYP3-201;source_gene=ENSG00000236620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442113.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP3;alternative_source_transcripts=ENST00000440468.1;transcript_id=HG002_chrY_T0002068;gene_id=HG002_chrY_G0000771;Parent=HG002_chrY_T0002068;transcript_name=HG002_chrY_T0002068;gene_name=XKRYP3;ID=exon:HG002_chrY_T0002068:0;Name=XKRYP3;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26755759	26765529	.	+	.	source_transcript=ENST00000442113.1;source_transcript_name=XKRYP3-201;source_gene=ENSG00000236620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442113.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP3;alternative_source_transcripts=ENST00000440468.1;transcript_id=HG002_chrY_T0002068;gene_id=HG002_chrY_G0000771;Parent=HG002_chrY_T0002068;transcript_name=HG002_chrY_T0002068;gene_name=XKRYP3;ID=intron:HG002_chrY_T0002068:0;Name=XKRYP3;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26765530	26766309	.	+	.	source_transcript=ENST00000442113.1;source_transcript_name=XKRYP3-201;source_gene=ENSG00000236620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442113.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP3;alternative_source_transcripts=ENST00000440468.1;transcript_id=HG002_chrY_T0002068;gene_id=HG002_chrY_G0000771;Parent=HG002_chrY_T0002068;transcript_name=HG002_chrY_T0002068;gene_name=XKRYP3;ID=exon:HG002_chrY_T0002068:1;Name=XKRYP3;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26803396	26803727	.	-	.	source_gene_common_name=ELOCP16;source_gene=ENSG00000227915.1;alternative_source_transcripts=ENST00000436690.1;gene_id=HG002_chrY_G0000772;gene_biotype=unprocessed_pseudogene;gene_name=ELOCP16;gene_sources=liftoff;ID=HG002_chrY_G0000772;Name=ELOCP16
HG002_chrY	CAT	transcript	26803396	26803727	1000	-	.	source_transcript=ENST00000444494.1;source_transcript_name=ELOCP16-201;source_gene=ENSG00000227915.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227915.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444494.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444494.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP16;alternative_source_transcripts=ENST00000436690.1;transcript_id=HG002_chrY_T0002069;gene_id=HG002_chrY_G0000772;Parent=HG002_chrY_G0000772;transcript_name=HG002_chrY_T0002069;gene_name=ELOCP16;ID=HG002_chrY_T0002069;Name=ELOCP16
HG002_chrY	CAT	exon	26803396	26803727	.	-	.	source_transcript=ENST00000444494.1;source_transcript_name=ELOCP16-201;source_gene=ENSG00000227915.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227915.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444494.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP16;alternative_source_transcripts=ENST00000436690.1;transcript_id=HG002_chrY_T0002069;gene_id=HG002_chrY_G0000772;Parent=HG002_chrY_T0002069;transcript_name=HG002_chrY_T0002069;gene_name=ELOCP16;ID=exon:HG002_chrY_T0002069:0;Name=ELOCP16;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26806839	26807852	.	-	.	source_gene_common_name=CDY14P;source_gene=ENSG00000226873.1;alternative_source_transcripts=ENST00000451661.1;gene_id=HG002_chrY_G0000773;gene_biotype=unprocessed_pseudogene;gene_name=CDY14P;gene_sources=liftoff;ID=HG002_chrY_G0000773;Name=CDY14P
HG002_chrY	CAT	transcript	26806839	26807852	1000	-	.	source_transcript=ENST00000431260.1;source_transcript_name=CDY14P-201;source_gene=ENSG00000226873.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226873.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431260.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY14P;alternative_source_transcripts=ENST00000451661.1;transcript_id=HG002_chrY_T0002070;gene_id=HG002_chrY_G0000773;Parent=HG002_chrY_G0000773;transcript_name=HG002_chrY_T0002070;gene_name=CDY14P;ID=HG002_chrY_T0002070;Name=CDY14P
HG002_chrY	CAT	exon	26806839	26807852	.	-	.	source_transcript=ENST00000431260.1;source_transcript_name=CDY14P-201;source_gene=ENSG00000226873.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226873.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY14P;alternative_source_transcripts=ENST00000451661.1;transcript_id=HG002_chrY_T0002070;gene_id=HG002_chrY_G0000773;Parent=HG002_chrY_T0002070;transcript_name=HG002_chrY_T0002070;gene_name=CDY14P;ID=exon:HG002_chrY_T0002070:0;Name=CDY14P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26814409	26822765	.	+	.	source_gene_common_name=USP9YP18;source_gene=ENSG00000223407.1;gene_id=HG002_chrY_G0000774;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP18;gene_sources=liftoff;ID=HG002_chrY_G0000774;Name=USP9YP18
HG002_chrY	CAT	transcript	26814409	26822765	1000	+	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;transcript_id=HG002_chrY_T0002071;gene_id=HG002_chrY_G0000774;Parent=HG002_chrY_G0000774;transcript_name=HG002_chrY_T0002071;gene_name=USP9YP18;ID=HG002_chrY_T0002071;Name=USP9YP18
HG002_chrY	CAT	exon	26814409	26814629	.	+	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;transcript_id=HG002_chrY_T0002071;gene_id=HG002_chrY_G0000774;Parent=HG002_chrY_T0002071;transcript_name=HG002_chrY_T0002071;gene_name=USP9YP18;ID=exon:HG002_chrY_T0002071:0;Name=USP9YP18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26814630	26816432	.	+	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;transcript_id=HG002_chrY_T0002071;gene_id=HG002_chrY_G0000774;Parent=HG002_chrY_T0002071;transcript_name=HG002_chrY_T0002071;gene_name=USP9YP18;ID=intron:HG002_chrY_T0002071:0;Name=USP9YP18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26816433	26816548	.	+	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;transcript_id=HG002_chrY_T0002071;gene_id=HG002_chrY_G0000774;Parent=HG002_chrY_T0002071;transcript_name=HG002_chrY_T0002071;gene_name=USP9YP18;ID=exon:HG002_chrY_T0002071:1;Name=USP9YP18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26816549	26818334	.	+	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;transcript_id=HG002_chrY_T0002071;gene_id=HG002_chrY_G0000774;Parent=HG002_chrY_T0002071;transcript_name=HG002_chrY_T0002071;gene_name=USP9YP18;ID=intron:HG002_chrY_T0002071:1;Name=USP9YP18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26818335	26818523	.	+	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;transcript_id=HG002_chrY_T0002071;gene_id=HG002_chrY_G0000774;Parent=HG002_chrY_T0002071;transcript_name=HG002_chrY_T0002071;gene_name=USP9YP18;ID=exon:HG002_chrY_T0002071:2;Name=USP9YP18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26818524	26820881	.	+	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;transcript_id=HG002_chrY_T0002071;gene_id=HG002_chrY_G0000774;Parent=HG002_chrY_T0002071;transcript_name=HG002_chrY_T0002071;gene_name=USP9YP18;ID=intron:HG002_chrY_T0002071:2;Name=USP9YP18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26820882	26821011	.	+	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;transcript_id=HG002_chrY_T0002071;gene_id=HG002_chrY_G0000774;Parent=HG002_chrY_T0002071;transcript_name=HG002_chrY_T0002071;gene_name=USP9YP18;ID=exon:HG002_chrY_T0002071:3;Name=USP9YP18;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26821012	26822726	.	+	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;transcript_id=HG002_chrY_T0002071;gene_id=HG002_chrY_G0000774;Parent=HG002_chrY_T0002071;transcript_name=HG002_chrY_T0002071;gene_name=USP9YP18;ID=intron:HG002_chrY_T0002071:3;Name=USP9YP18;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26822727	26822765	.	+	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;transcript_id=HG002_chrY_T0002071;gene_id=HG002_chrY_G0000774;Parent=HG002_chrY_T0002071;transcript_name=HG002_chrY_T0002071;gene_name=USP9YP18;ID=exon:HG002_chrY_T0002071:4;Name=USP9YP18;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26823173	26824392	.	+	.	source_gene_common_name=HSFY6P;source_gene=ENSG00000224169.1;gene_id=HG002_chrY_G0000775;gene_biotype=unprocessed_pseudogene;gene_name=HSFY6P;gene_sources=liftoff;ID=HG002_chrY_G0000775;Name=HSFY6P
HG002_chrY	CAT	transcript	26823173	26824392	1000	+	.	source_transcript=ENST00000445573.1;source_transcript_name=HSFY6P-201;source_gene=ENSG00000224169.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224169.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445573.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445573.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY6P;transcript_id=HG002_chrY_T0002072;gene_id=HG002_chrY_G0000775;Parent=HG002_chrY_G0000775;transcript_name=HG002_chrY_T0002072;gene_name=HSFY6P;ID=HG002_chrY_T0002072;Name=HSFY6P
HG002_chrY	CAT	exon	26823173	26823256	.	+	.	source_transcript=ENST00000445573.1;source_transcript_name=HSFY6P-201;source_gene=ENSG00000224169.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224169.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445573.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445573.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY6P;transcript_id=HG002_chrY_T0002072;gene_id=HG002_chrY_G0000775;Parent=HG002_chrY_T0002072;transcript_name=HG002_chrY_T0002072;gene_name=HSFY6P;ID=exon:HG002_chrY_T0002072:0;Name=HSFY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26823257	26823588	.	+	.	source_transcript=ENST00000445573.1;source_transcript_name=HSFY6P-201;source_gene=ENSG00000224169.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224169.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445573.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445573.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY6P;transcript_id=HG002_chrY_T0002072;gene_id=HG002_chrY_G0000775;Parent=HG002_chrY_T0002072;transcript_name=HG002_chrY_T0002072;gene_name=HSFY6P;ID=intron:HG002_chrY_T0002072:0;Name=HSFY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26823589	26823748	.	+	.	source_transcript=ENST00000445573.1;source_transcript_name=HSFY6P-201;source_gene=ENSG00000224169.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224169.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445573.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445573.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY6P;transcript_id=HG002_chrY_T0002072;gene_id=HG002_chrY_G0000775;Parent=HG002_chrY_T0002072;transcript_name=HG002_chrY_T0002072;gene_name=HSFY6P;ID=exon:HG002_chrY_T0002072:1;Name=HSFY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26823749	26824233	.	+	.	source_transcript=ENST00000445573.1;source_transcript_name=HSFY6P-201;source_gene=ENSG00000224169.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224169.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445573.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445573.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY6P;transcript_id=HG002_chrY_T0002072;gene_id=HG002_chrY_G0000775;Parent=HG002_chrY_T0002072;transcript_name=HG002_chrY_T0002072;gene_name=HSFY6P;ID=intron:HG002_chrY_T0002072:1;Name=HSFY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26824234	26824392	.	+	.	source_transcript=ENST00000445573.1;source_transcript_name=HSFY6P-201;source_gene=ENSG00000224169.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224169.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445573.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445573.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY6P;transcript_id=HG002_chrY_T0002072;gene_id=HG002_chrY_G0000775;Parent=HG002_chrY_T0002072;transcript_name=HG002_chrY_T0002072;gene_name=HSFY6P;ID=exon:HG002_chrY_T0002072:2;Name=HSFY6P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26841442	26844608	.	-	.	source_gene_common_name=ENSG00000295422;source_gene=ENSG00000295422.1;gene_id=HG002_chrY_G0000776;gene_biotype=lncRNA;gene_name=ENSG00000295422;gene_sources=liftoff;ID=HG002_chrY_G0000776;Name=ENSG00000295422
HG002_chrY	CAT	transcript	26841442	26844608	1000	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG002_chrY_T0002073;gene_id=HG002_chrY_G0000776;Parent=HG002_chrY_G0000776;transcript_name=HG002_chrY_T0002073;gene_name=ENSG00000295422;ID=HG002_chrY_T0002073;Name=ENSG00000295422
HG002_chrY	CAT	exon	26841442	26842784	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG002_chrY_T0002073;gene_id=HG002_chrY_G0000776;Parent=HG002_chrY_T0002073;transcript_name=HG002_chrY_T0002073;gene_name=ENSG00000295422;ID=exon:HG002_chrY_T0002073:0;Name=ENSG00000295422;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26842785	26844319	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG002_chrY_T0002073;gene_id=HG002_chrY_G0000776;Parent=HG002_chrY_T0002073;transcript_name=HG002_chrY_T0002073;gene_name=ENSG00000295422;ID=intron:HG002_chrY_T0002073:0;Name=ENSG00000295422;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26844320	26844380	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG002_chrY_T0002073;gene_id=HG002_chrY_G0000776;Parent=HG002_chrY_T0002073;transcript_name=HG002_chrY_T0002073;gene_name=ENSG00000295422;ID=exon:HG002_chrY_T0002073:1;Name=ENSG00000295422;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26844381	26844497	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG002_chrY_T0002073;gene_id=HG002_chrY_G0000776;Parent=HG002_chrY_T0002073;transcript_name=HG002_chrY_T0002073;gene_name=ENSG00000295422;ID=intron:HG002_chrY_T0002073:1;Name=ENSG00000295422;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26844498	26844608	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG002_chrY_T0002073;gene_id=HG002_chrY_G0000776;Parent=HG002_chrY_T0002073;transcript_name=HG002_chrY_T0002073;gene_name=ENSG00000295422;ID=exon:HG002_chrY_T0002073:2;Name=ENSG00000295422;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26867595	26900640	.	-	.	source_gene_common_name=OFD1P10Y;source_gene=ENSG00000225466.1;gene_id=HG002_chrY_G0000777;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=OFD1P10Y;gene_sources=liftoff;ID=HG002_chrY_G0000777;Name=OFD1P10Y
HG002_chrY	CAT	transcript	26867595	26900640	1000	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG002_chrY_T0002074;gene_id=HG002_chrY_G0000777;Parent=HG002_chrY_G0000777;transcript_name=HG002_chrY_T0002074;gene_name=OFD1P10Y;ID=HG002_chrY_T0002074;Name=OFD1P10Y
HG002_chrY	CAT	exon	26867595	26867626	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG002_chrY_T0002074;gene_id=HG002_chrY_G0000777;Parent=HG002_chrY_T0002074;transcript_name=HG002_chrY_T0002074;gene_name=OFD1P10Y;ID=exon:HG002_chrY_T0002074:0;Name=OFD1P10Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26867627	26867925	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG002_chrY_T0002074;gene_id=HG002_chrY_G0000777;Parent=HG002_chrY_T0002074;transcript_name=HG002_chrY_T0002074;gene_name=OFD1P10Y;ID=intron:HG002_chrY_T0002074:0;Name=OFD1P10Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26867926	26868007	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG002_chrY_T0002074;gene_id=HG002_chrY_G0000777;Parent=HG002_chrY_T0002074;transcript_name=HG002_chrY_T0002074;gene_name=OFD1P10Y;ID=exon:HG002_chrY_T0002074:1;Name=OFD1P10Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26868008	26869195	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG002_chrY_T0002074;gene_id=HG002_chrY_G0000777;Parent=HG002_chrY_T0002074;transcript_name=HG002_chrY_T0002074;gene_name=OFD1P10Y;ID=intron:HG002_chrY_T0002074:1;Name=OFD1P10Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26869196	26869350	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG002_chrY_T0002074;gene_id=HG002_chrY_G0000777;Parent=HG002_chrY_T0002074;transcript_name=HG002_chrY_T0002074;gene_name=OFD1P10Y;ID=exon:HG002_chrY_T0002074:2;Name=OFD1P10Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26869351	26875984	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG002_chrY_T0002074;gene_id=HG002_chrY_G0000777;Parent=HG002_chrY_T0002074;transcript_name=HG002_chrY_T0002074;gene_name=OFD1P10Y;ID=intron:HG002_chrY_T0002074:2;Name=OFD1P10Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26875985	26876085	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG002_chrY_T0002074;gene_id=HG002_chrY_G0000777;Parent=HG002_chrY_T0002074;transcript_name=HG002_chrY_T0002074;gene_name=OFD1P10Y;ID=exon:HG002_chrY_T0002074:3;Name=OFD1P10Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26876086	26895430	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG002_chrY_T0002074;gene_id=HG002_chrY_G0000777;Parent=HG002_chrY_T0002074;transcript_name=HG002_chrY_T0002074;gene_name=OFD1P10Y;ID=intron:HG002_chrY_T0002074:3;Name=OFD1P10Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26895431	26895535	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG002_chrY_T0002074;gene_id=HG002_chrY_G0000777;Parent=HG002_chrY_T0002074;transcript_name=HG002_chrY_T0002074;gene_name=OFD1P10Y;ID=exon:HG002_chrY_T0002074:4;Name=OFD1P10Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26895536	26895908	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG002_chrY_T0002074;gene_id=HG002_chrY_G0000777;Parent=HG002_chrY_T0002074;transcript_name=HG002_chrY_T0002074;gene_name=OFD1P10Y;ID=intron:HG002_chrY_T0002074:4;Name=OFD1P10Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26895909	26896524	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG002_chrY_T0002074;gene_id=HG002_chrY_G0000777;Parent=HG002_chrY_T0002074;transcript_name=HG002_chrY_T0002074;gene_name=OFD1P10Y;ID=exon:HG002_chrY_T0002074:5;Name=OFD1P10Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26896525	26898241	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG002_chrY_T0002074;gene_id=HG002_chrY_G0000777;Parent=HG002_chrY_T0002074;transcript_name=HG002_chrY_T0002074;gene_name=OFD1P10Y;ID=intron:HG002_chrY_T0002074:5;Name=OFD1P10Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26898242	26898351	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG002_chrY_T0002074;gene_id=HG002_chrY_G0000777;Parent=HG002_chrY_T0002074;transcript_name=HG002_chrY_T0002074;gene_name=OFD1P10Y;ID=exon:HG002_chrY_T0002074:6;Name=OFD1P10Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26898352	26898887	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG002_chrY_T0002074;gene_id=HG002_chrY_G0000777;Parent=HG002_chrY_T0002074;transcript_name=HG002_chrY_T0002074;gene_name=OFD1P10Y;ID=intron:HG002_chrY_T0002074:6;Name=OFD1P10Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26898888	26899012	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG002_chrY_T0002074;gene_id=HG002_chrY_G0000777;Parent=HG002_chrY_T0002074;transcript_name=HG002_chrY_T0002074;gene_name=OFD1P10Y;ID=exon:HG002_chrY_T0002074:7;Name=OFD1P10Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26899013	26900533	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG002_chrY_T0002074;gene_id=HG002_chrY_G0000777;Parent=HG002_chrY_T0002074;transcript_name=HG002_chrY_T0002074;gene_name=OFD1P10Y;ID=intron:HG002_chrY_T0002074:7;Name=OFD1P10Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26900534	26900640	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=HG002_chrY_T0002074;gene_id=HG002_chrY_G0000777;Parent=HG002_chrY_T0002074;transcript_name=HG002_chrY_T0002074;gene_name=OFD1P10Y;ID=exon:HG002_chrY_T0002074:8;Name=OFD1P10Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26921625	26927080	.	+	.	source_gene_common_name=ENSG00000305658;source_gene=ENSG00000305658.1;alternative_source_transcripts=ENST00000765189.1;gene_id=HG002_chrY_G0000778;gene_biotype=lncRNA;gene_name=ENSG00000305658;gene_sources=liftoff;ID=HG002_chrY_G0000778;Name=ENSG00000305658
HG002_chrY	CAT	transcript	26921625	26927080	1000	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;alternative_source_transcripts=ENST00000765189.1;transcript_id=HG002_chrY_T0002075;gene_id=HG002_chrY_G0000778;Parent=HG002_chrY_G0000778;transcript_name=HG002_chrY_T0002075;gene_name=ENSG00000305658;ID=HG002_chrY_T0002075;Name=ENSG00000305658
HG002_chrY	CAT	exon	26921625	26921963	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;alternative_source_transcripts=ENST00000765189.1;transcript_id=HG002_chrY_T0002075;gene_id=HG002_chrY_G0000778;Parent=HG002_chrY_T0002075;transcript_name=HG002_chrY_T0002075;gene_name=ENSG00000305658;ID=exon:HG002_chrY_T0002075:0;Name=ENSG00000305658;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26921964	26923881	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;alternative_source_transcripts=ENST00000765189.1;transcript_id=HG002_chrY_T0002075;gene_id=HG002_chrY_G0000778;Parent=HG002_chrY_T0002075;transcript_name=HG002_chrY_T0002075;gene_name=ENSG00000305658;ID=intron:HG002_chrY_T0002075:0;Name=ENSG00000305658;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26923882	26924015	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;alternative_source_transcripts=ENST00000765189.1;transcript_id=HG002_chrY_T0002075;gene_id=HG002_chrY_G0000778;Parent=HG002_chrY_T0002075;transcript_name=HG002_chrY_T0002075;gene_name=ENSG00000305658;ID=exon:HG002_chrY_T0002075:1;Name=ENSG00000305658;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26924016	26925883	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;alternative_source_transcripts=ENST00000765189.1;transcript_id=HG002_chrY_T0002075;gene_id=HG002_chrY_G0000778;Parent=HG002_chrY_T0002075;transcript_name=HG002_chrY_T0002075;gene_name=ENSG00000305658;ID=intron:HG002_chrY_T0002075:1;Name=ENSG00000305658;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26925884	26926010	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;alternative_source_transcripts=ENST00000765189.1;transcript_id=HG002_chrY_T0002075;gene_id=HG002_chrY_G0000778;Parent=HG002_chrY_T0002075;transcript_name=HG002_chrY_T0002075;gene_name=ENSG00000305658;ID=exon:HG002_chrY_T0002075:2;Name=ENSG00000305658;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26926011	26926374	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;alternative_source_transcripts=ENST00000765189.1;transcript_id=HG002_chrY_T0002075;gene_id=HG002_chrY_G0000778;Parent=HG002_chrY_T0002075;transcript_name=HG002_chrY_T0002075;gene_name=ENSG00000305658;ID=intron:HG002_chrY_T0002075:2;Name=ENSG00000305658;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26926375	26927080	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;alternative_source_transcripts=ENST00000765189.1;transcript_id=HG002_chrY_T0002075;gene_id=HG002_chrY_G0000778;Parent=HG002_chrY_T0002075;transcript_name=HG002_chrY_T0002075;gene_name=ENSG00000305658;ID=exon:HG002_chrY_T0002075:3;Name=ENSG00000305658;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26930854	26932430	.	-	.	source_gene_common_name=ENSG00000236647;source_gene=ENSG00000236647.1;gene_id=HG002_chrY_G0000779;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000236647;gene_sources=liftoff;ID=HG002_chrY_G0000779;Name=ENSG00000236647
HG002_chrY	CAT	transcript	26930854	26932430	1000	-	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;transcript_id=HG002_chrY_T0002076;gene_id=HG002_chrY_G0000779;Parent=HG002_chrY_G0000779;transcript_name=HG002_chrY_T0002076;gene_name=ENSG00000236647;ID=HG002_chrY_T0002076;Name=ENSG00000236647
HG002_chrY	CAT	exon	26930854	26930929	.	-	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;transcript_id=HG002_chrY_T0002076;gene_id=HG002_chrY_G0000779;Parent=HG002_chrY_T0002076;transcript_name=HG002_chrY_T0002076;gene_name=ENSG00000236647;ID=exon:HG002_chrY_T0002076:0;Name=ENSG00000236647;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26930930	26931046	.	-	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;transcript_id=HG002_chrY_T0002076;gene_id=HG002_chrY_G0000779;Parent=HG002_chrY_T0002076;transcript_name=HG002_chrY_T0002076;gene_name=ENSG00000236647;ID=intron:HG002_chrY_T0002076:0;Name=ENSG00000236647;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26931047	26931186	.	-	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;transcript_id=HG002_chrY_T0002076;gene_id=HG002_chrY_G0000779;Parent=HG002_chrY_T0002076;transcript_name=HG002_chrY_T0002076;gene_name=ENSG00000236647;ID=exon:HG002_chrY_T0002076:1;Name=ENSG00000236647;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26931187	26931281	.	-	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;transcript_id=HG002_chrY_T0002076;gene_id=HG002_chrY_G0000779;Parent=HG002_chrY_T0002076;transcript_name=HG002_chrY_T0002076;gene_name=ENSG00000236647;ID=intron:HG002_chrY_T0002076:1;Name=ENSG00000236647;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26931282	26931356	.	-	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;transcript_id=HG002_chrY_T0002076;gene_id=HG002_chrY_G0000779;Parent=HG002_chrY_T0002076;transcript_name=HG002_chrY_T0002076;gene_name=ENSG00000236647;ID=exon:HG002_chrY_T0002076:2;Name=ENSG00000236647;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26931357	26931585	.	-	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;transcript_id=HG002_chrY_T0002076;gene_id=HG002_chrY_G0000779;Parent=HG002_chrY_T0002076;transcript_name=HG002_chrY_T0002076;gene_name=ENSG00000236647;ID=intron:HG002_chrY_T0002076:2;Name=ENSG00000236647;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26931586	26931624	.	-	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;transcript_id=HG002_chrY_T0002076;gene_id=HG002_chrY_G0000779;Parent=HG002_chrY_T0002076;transcript_name=HG002_chrY_T0002076;gene_name=ENSG00000236647;ID=exon:HG002_chrY_T0002076:3;Name=ENSG00000236647;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26931625	26932088	.	-	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;transcript_id=HG002_chrY_T0002076;gene_id=HG002_chrY_G0000779;Parent=HG002_chrY_T0002076;transcript_name=HG002_chrY_T0002076;gene_name=ENSG00000236647;ID=intron:HG002_chrY_T0002076:3;Name=ENSG00000236647;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26932089	26932430	.	-	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;transcript_id=HG002_chrY_T0002076;gene_id=HG002_chrY_G0000779;Parent=HG002_chrY_T0002076;transcript_name=HG002_chrY_T0002076;gene_name=ENSG00000236647;ID=exon:HG002_chrY_T0002076:4;Name=ENSG00000236647;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26933295	26943141	.	+	.	source_gene_common_name=ENSG00000293249;source_gene=ENSG00000293249.2;gene_id=HG002_chrY_G0000780;gene_biotype=lncRNA;gene_name=ENSG00000293249;gene_sources=liftoff;ID=HG002_chrY_G0000780;Name=ENSG00000293249
HG002_chrY	CAT	transcript	26933295	26943141	1000	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002077;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_G0000780;transcript_name=HG002_chrY_T0002077;gene_name=ENSG00000293249;ID=HG002_chrY_T0002077;Name=ENSG00000293249
HG002_chrY	CAT	exon	26933295	26933444	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002077;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002077;transcript_name=HG002_chrY_T0002077;gene_name=ENSG00000293249;ID=exon:HG002_chrY_T0002077:0;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26933445	26934198	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002077;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002077;transcript_name=HG002_chrY_T0002077;gene_name=ENSG00000293249;ID=intron:HG002_chrY_T0002077:0;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26934199	26934278	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002077;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002077;transcript_name=HG002_chrY_T0002077;gene_name=ENSG00000293249;ID=exon:HG002_chrY_T0002077:1;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26934279	26935292	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002077;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002077;transcript_name=HG002_chrY_T0002077;gene_name=ENSG00000293249;ID=intron:HG002_chrY_T0002077:1;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26935293	26935405	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002077;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002077;transcript_name=HG002_chrY_T0002077;gene_name=ENSG00000293249;ID=exon:HG002_chrY_T0002077:2;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26935406	26935858	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002077;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002077;transcript_name=HG002_chrY_T0002077;gene_name=ENSG00000293249;ID=intron:HG002_chrY_T0002077:2;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26935859	26935962	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002077;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002077;transcript_name=HG002_chrY_T0002077;gene_name=ENSG00000293249;ID=exon:HG002_chrY_T0002077:3;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26935963	26938670	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002077;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002077;transcript_name=HG002_chrY_T0002077;gene_name=ENSG00000293249;ID=intron:HG002_chrY_T0002077:3;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26938671	26938848	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002077;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002077;transcript_name=HG002_chrY_T0002077;gene_name=ENSG00000293249;ID=exon:HG002_chrY_T0002077:4;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26938849	26940783	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002077;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002077;transcript_name=HG002_chrY_T0002077;gene_name=ENSG00000293249;ID=intron:HG002_chrY_T0002077:4;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26940784	26940936	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002077;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002077;transcript_name=HG002_chrY_T0002077;gene_name=ENSG00000293249;ID=exon:HG002_chrY_T0002077:5;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26940937	26942943	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002077;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002077;transcript_name=HG002_chrY_T0002077;gene_name=ENSG00000293249;ID=intron:HG002_chrY_T0002077:5;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26942944	26943141	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002077;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002077;transcript_name=HG002_chrY_T0002077;gene_name=ENSG00000293249;ID=exon:HG002_chrY_T0002077:6;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	26933314	26941774	1000	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002078;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_G0000780;transcript_name=HG002_chrY_T0002078;gene_name=ENSG00000293249;ID=HG002_chrY_T0002078;Name=ENSG00000293249
HG002_chrY	CAT	exon	26933314	26933444	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002078;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002078;transcript_name=HG002_chrY_T0002078;gene_name=ENSG00000293249;ID=exon:HG002_chrY_T0002078:0;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26933445	26934198	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002078;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002078;transcript_name=HG002_chrY_T0002078;gene_name=ENSG00000293249;ID=intron:HG002_chrY_T0002078:0;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26934199	26934278	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002078;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002078;transcript_name=HG002_chrY_T0002078;gene_name=ENSG00000293249;ID=exon:HG002_chrY_T0002078:1;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26934279	26935292	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002078;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002078;transcript_name=HG002_chrY_T0002078;gene_name=ENSG00000293249;ID=intron:HG002_chrY_T0002078:1;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26935293	26935405	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002078;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002078;transcript_name=HG002_chrY_T0002078;gene_name=ENSG00000293249;ID=exon:HG002_chrY_T0002078:2;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26935406	26935858	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002078;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002078;transcript_name=HG002_chrY_T0002078;gene_name=ENSG00000293249;ID=intron:HG002_chrY_T0002078:2;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26935859	26935962	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002078;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002078;transcript_name=HG002_chrY_T0002078;gene_name=ENSG00000293249;ID=exon:HG002_chrY_T0002078:3;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26935963	26938670	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002078;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002078;transcript_name=HG002_chrY_T0002078;gene_name=ENSG00000293249;ID=intron:HG002_chrY_T0002078:3;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26938671	26938848	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002078;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002078;transcript_name=HG002_chrY_T0002078;gene_name=ENSG00000293249;ID=exon:HG002_chrY_T0002078:4;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26938849	26940783	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002078;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002078;transcript_name=HG002_chrY_T0002078;gene_name=ENSG00000293249;ID=intron:HG002_chrY_T0002078:4;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26940784	26940936	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002078;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002078;transcript_name=HG002_chrY_T0002078;gene_name=ENSG00000293249;ID=exon:HG002_chrY_T0002078:5;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26940937	26941514	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002078;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002078;transcript_name=HG002_chrY_T0002078;gene_name=ENSG00000293249;ID=intron:HG002_chrY_T0002078:5;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26941515	26941774	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002078;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002078;transcript_name=HG002_chrY_T0002078;gene_name=ENSG00000293249;ID=exon:HG002_chrY_T0002078:6;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	26933323	26941774	1000	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002079;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_G0000780;transcript_name=HG002_chrY_T0002079;gene_name=ENSG00000293249;ID=HG002_chrY_T0002079;Name=ENSG00000293249
HG002_chrY	CAT	exon	26933323	26933444	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002079;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002079;transcript_name=HG002_chrY_T0002079;gene_name=ENSG00000293249;ID=exon:HG002_chrY_T0002079:0;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26933445	26934095	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002079;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002079;transcript_name=HG002_chrY_T0002079;gene_name=ENSG00000293249;ID=intron:HG002_chrY_T0002079:0;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26934096	26934278	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002079;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002079;transcript_name=HG002_chrY_T0002079;gene_name=ENSG00000293249;ID=exon:HG002_chrY_T0002079:1;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26934279	26935292	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002079;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002079;transcript_name=HG002_chrY_T0002079;gene_name=ENSG00000293249;ID=intron:HG002_chrY_T0002079:1;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26935293	26935405	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002079;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002079;transcript_name=HG002_chrY_T0002079;gene_name=ENSG00000293249;ID=exon:HG002_chrY_T0002079:2;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26935406	26935858	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002079;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002079;transcript_name=HG002_chrY_T0002079;gene_name=ENSG00000293249;ID=intron:HG002_chrY_T0002079:2;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26935859	26935962	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002079;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002079;transcript_name=HG002_chrY_T0002079;gene_name=ENSG00000293249;ID=exon:HG002_chrY_T0002079:3;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26935963	26938670	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002079;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002079;transcript_name=HG002_chrY_T0002079;gene_name=ENSG00000293249;ID=intron:HG002_chrY_T0002079:3;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26938671	26938848	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002079;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002079;transcript_name=HG002_chrY_T0002079;gene_name=ENSG00000293249;ID=exon:HG002_chrY_T0002079:4;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26938849	26940783	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002079;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002079;transcript_name=HG002_chrY_T0002079;gene_name=ENSG00000293249;ID=intron:HG002_chrY_T0002079:4;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26940784	26940936	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002079;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002079;transcript_name=HG002_chrY_T0002079;gene_name=ENSG00000293249;ID=exon:HG002_chrY_T0002079:5;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26940937	26941514	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002079;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002079;transcript_name=HG002_chrY_T0002079;gene_name=ENSG00000293249;ID=intron:HG002_chrY_T0002079:5;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26941515	26941774	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=HG002_chrY_T0002079;gene_id=HG002_chrY_G0000780;Parent=HG002_chrY_T0002079;transcript_name=HG002_chrY_T0002079;gene_name=ENSG00000293249;ID=exon:HG002_chrY_T0002079:6;Name=ENSG00000293249;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26935297	26944931	.	+	.	source_gene_common_name=RBMY2CP;source_gene=ENSG00000215540.11;gene_id=HG002_chrY_G0000781;gene_biotype=transcribed_processed_pseudogene;gene_name=RBMY2CP;gene_sources=liftoff;ID=HG002_chrY_G0000781;Name=RBMY2CP
HG002_chrY	CAT	transcript	26935297	26944931	1000	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG002_chrY_T0002080;gene_id=HG002_chrY_G0000781;Parent=HG002_chrY_G0000781;transcript_name=HG002_chrY_T0002080;gene_name=RBMY2CP;ID=HG002_chrY_T0002080;Name=RBMY2CP
HG002_chrY	CAT	exon	26935297	26935405	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG002_chrY_T0002080;gene_id=HG002_chrY_G0000781;Parent=HG002_chrY_T0002080;transcript_name=HG002_chrY_T0002080;gene_name=RBMY2CP;ID=exon:HG002_chrY_T0002080:0;Name=RBMY2CP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26935406	26935858	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG002_chrY_T0002080;gene_id=HG002_chrY_G0000781;Parent=HG002_chrY_T0002080;transcript_name=HG002_chrY_T0002080;gene_name=RBMY2CP;ID=intron:HG002_chrY_T0002080:0;Name=RBMY2CP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26935859	26935962	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG002_chrY_T0002080;gene_id=HG002_chrY_G0000781;Parent=HG002_chrY_T0002080;transcript_name=HG002_chrY_T0002080;gene_name=RBMY2CP;ID=exon:HG002_chrY_T0002080:1;Name=RBMY2CP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26935963	26938670	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG002_chrY_T0002080;gene_id=HG002_chrY_G0000781;Parent=HG002_chrY_T0002080;transcript_name=HG002_chrY_T0002080;gene_name=RBMY2CP;ID=intron:HG002_chrY_T0002080:1;Name=RBMY2CP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26938671	26938848	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG002_chrY_T0002080;gene_id=HG002_chrY_G0000781;Parent=HG002_chrY_T0002080;transcript_name=HG002_chrY_T0002080;gene_name=RBMY2CP;ID=exon:HG002_chrY_T0002080:2;Name=RBMY2CP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26938849	26940783	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG002_chrY_T0002080;gene_id=HG002_chrY_G0000781;Parent=HG002_chrY_T0002080;transcript_name=HG002_chrY_T0002080;gene_name=RBMY2CP;ID=intron:HG002_chrY_T0002080:2;Name=RBMY2CP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26940784	26940936	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG002_chrY_T0002080;gene_id=HG002_chrY_G0000781;Parent=HG002_chrY_T0002080;transcript_name=HG002_chrY_T0002080;gene_name=RBMY2CP;ID=exon:HG002_chrY_T0002080:3;Name=RBMY2CP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26940937	26942943	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG002_chrY_T0002080;gene_id=HG002_chrY_G0000781;Parent=HG002_chrY_T0002080;transcript_name=HG002_chrY_T0002080;gene_name=RBMY2CP;ID=intron:HG002_chrY_T0002080:3;Name=RBMY2CP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26942944	26943058	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG002_chrY_T0002080;gene_id=HG002_chrY_G0000781;Parent=HG002_chrY_T0002080;transcript_name=HG002_chrY_T0002080;gene_name=RBMY2CP;ID=exon:HG002_chrY_T0002080:4;Name=RBMY2CP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26943059	26943927	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG002_chrY_T0002080;gene_id=HG002_chrY_G0000781;Parent=HG002_chrY_T0002080;transcript_name=HG002_chrY_T0002080;gene_name=RBMY2CP;ID=intron:HG002_chrY_T0002080:4;Name=RBMY2CP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26943928	26944038	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG002_chrY_T0002080;gene_id=HG002_chrY_G0000781;Parent=HG002_chrY_T0002080;transcript_name=HG002_chrY_T0002080;gene_name=RBMY2CP;ID=exon:HG002_chrY_T0002080:5;Name=RBMY2CP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26944039	26944120	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG002_chrY_T0002080;gene_id=HG002_chrY_G0000781;Parent=HG002_chrY_T0002080;transcript_name=HG002_chrY_T0002080;gene_name=RBMY2CP;ID=intron:HG002_chrY_T0002080:5;Name=RBMY2CP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26944121	26944208	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG002_chrY_T0002080;gene_id=HG002_chrY_G0000781;Parent=HG002_chrY_T0002080;transcript_name=HG002_chrY_T0002080;gene_name=RBMY2CP;ID=exon:HG002_chrY_T0002080:6;Name=RBMY2CP;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26944209	26944632	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG002_chrY_T0002080;gene_id=HG002_chrY_G0000781;Parent=HG002_chrY_T0002080;transcript_name=HG002_chrY_T0002080;gene_name=RBMY2CP;ID=intron:HG002_chrY_T0002080:6;Name=RBMY2CP;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26944633	26944931	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG002_chrY_T0002080;gene_id=HG002_chrY_G0000781;Parent=HG002_chrY_T0002080;transcript_name=HG002_chrY_T0002080;gene_name=RBMY2CP;ID=exon:HG002_chrY_T0002080:7;Name=RBMY2CP;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	26956870	26958918	.	-	.	source_gene_common_name=ENSG00000230073;source_gene=ENSG00000230073.1;gene_id=HG002_chrY_G0000782;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000230073;gene_sources=liftoff;ID=HG002_chrY_G0000782;Name=ENSG00000230073
HG002_chrY	CAT	transcript	26956870	26958918	1000	-	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=HG002_chrY_T0002081;gene_id=HG002_chrY_G0000782;Parent=HG002_chrY_G0000782;transcript_name=HG002_chrY_T0002081;gene_name=ENSG00000230073;ID=HG002_chrY_T0002081;Name=ENSG00000230073
HG002_chrY	CAT	exon	26956870	26957013	.	-	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=HG002_chrY_T0002081;gene_id=HG002_chrY_G0000782;Parent=HG002_chrY_T0002081;transcript_name=HG002_chrY_T0002081;gene_name=ENSG00000230073;ID=exon:HG002_chrY_T0002081:0;Name=ENSG00000230073;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26957014	26957105	.	-	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=HG002_chrY_T0002081;gene_id=HG002_chrY_G0000782;Parent=HG002_chrY_T0002081;transcript_name=HG002_chrY_T0002081;gene_name=ENSG00000230073;ID=intron:HG002_chrY_T0002081:0;Name=ENSG00000230073;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26957106	26957229	.	-	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=HG002_chrY_T0002081;gene_id=HG002_chrY_G0000782;Parent=HG002_chrY_T0002081;transcript_name=HG002_chrY_T0002081;gene_name=ENSG00000230073;ID=exon:HG002_chrY_T0002081:1;Name=ENSG00000230073;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26957230	26957429	.	-	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=HG002_chrY_T0002081;gene_id=HG002_chrY_G0000782;Parent=HG002_chrY_T0002081;transcript_name=HG002_chrY_T0002081;gene_name=ENSG00000230073;ID=intron:HG002_chrY_T0002081:1;Name=ENSG00000230073;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26957430	26957486	.	-	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=HG002_chrY_T0002081;gene_id=HG002_chrY_G0000782;Parent=HG002_chrY_T0002081;transcript_name=HG002_chrY_T0002081;gene_name=ENSG00000230073;ID=exon:HG002_chrY_T0002081:2;Name=ENSG00000230073;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	26957487	26958516	.	-	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=HG002_chrY_T0002081;gene_id=HG002_chrY_G0000782;Parent=HG002_chrY_T0002081;transcript_name=HG002_chrY_T0002081;gene_name=ENSG00000230073;ID=intron:HG002_chrY_T0002081:2;Name=ENSG00000230073;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	26958517	26958918	.	-	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=HG002_chrY_T0002081;gene_id=HG002_chrY_G0000782;Parent=HG002_chrY_T0002081;transcript_name=HG002_chrY_T0002081;gene_name=ENSG00000230073;ID=exon:HG002_chrY_T0002081:3;Name=ENSG00000230073;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	27009957	27019772	.	-	.	source_gene_common_name=REREP1Y;source_gene=ENSG00000225189.1;gene_id=HG002_chrY_G0000783;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=REREP1Y;gene_sources=liftoff;ID=HG002_chrY_G0000783;Name=REREP1Y
HG002_chrY	CAT	transcript	27009957	27019772	1000	-	.	source_transcript=ENST00000422655.1;source_transcript_name=REREP1Y-201;source_gene=ENSG00000225189.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225189.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000422655.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422655.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;transcript_id=HG002_chrY_T0002082;gene_id=HG002_chrY_G0000783;Parent=HG002_chrY_G0000783;transcript_name=HG002_chrY_T0002082;gene_name=REREP1Y;ID=HG002_chrY_T0002082;Name=REREP1Y
HG002_chrY	CAT	exon	27009957	27010083	.	-	.	source_transcript=ENST00000422655.1;source_transcript_name=REREP1Y-201;source_gene=ENSG00000225189.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225189.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000422655.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422655.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;transcript_id=HG002_chrY_T0002082;gene_id=HG002_chrY_G0000783;Parent=HG002_chrY_T0002082;transcript_name=HG002_chrY_T0002082;gene_name=REREP1Y;ID=exon:HG002_chrY_T0002082:0;Name=REREP1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27010084	27019701	.	-	.	source_transcript=ENST00000422655.1;source_transcript_name=REREP1Y-201;source_gene=ENSG00000225189.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225189.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000422655.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422655.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;transcript_id=HG002_chrY_T0002082;gene_id=HG002_chrY_G0000783;Parent=HG002_chrY_T0002082;transcript_name=HG002_chrY_T0002082;gene_name=REREP1Y;ID=intron:HG002_chrY_T0002082:0;Name=REREP1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27019702	27019772	.	-	.	source_transcript=ENST00000422655.1;source_transcript_name=REREP1Y-201;source_gene=ENSG00000225189.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225189.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000422655.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422655.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;transcript_id=HG002_chrY_T0002082;gene_id=HG002_chrY_G0000783;Parent=HG002_chrY_T0002082;transcript_name=HG002_chrY_T0002082;gene_name=REREP1Y;ID=exon:HG002_chrY_T0002082:1;Name=REREP1Y;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	27046233	27046334	.	-	.	source_gene_common_name=ENSG00000289705;source_gene=ENSG00000289705.1;alternative_source_transcripts=ENST00000696462.1;gene_id=HG002_chrY_G0000784;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000289705;gene_sources=liftoff;ID=HG002_chrY_G0000784;Name=ENSG00000289705
HG002_chrY	CAT	transcript	27046233	27046334	1000	-	.	source_transcript=ENST00000696462.1;source_transcript_name=ENST00000696462;source_gene=ENSG00000289705.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000289705.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000696462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696462.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289705;alternative_source_transcripts=ENST00000696462.1;transcript_id=HG002_chrY_T0002083;gene_id=HG002_chrY_G0000784;Parent=HG002_chrY_G0000784;transcript_name=HG002_chrY_T0002083;gene_name=ENSG00000289705;ID=HG002_chrY_T0002083;Name=ENSG00000289705
HG002_chrY	CAT	exon	27046233	27046334	.	-	.	source_transcript=ENST00000696462.1;source_transcript_name=ENST00000696462;source_gene=ENSG00000289705.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000289705.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000696462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289705;alternative_source_transcripts=ENST00000696462.1;transcript_id=HG002_chrY_T0002083;gene_id=HG002_chrY_G0000784;Parent=HG002_chrY_T0002083;transcript_name=HG002_chrY_T0002083;gene_name=ENSG00000289705;ID=exon:HG002_chrY_T0002083:0;Name=ENSG00000289705;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	27055968	27056190	.	-	.	source_gene_common_name=ENSG00000225876;source_gene=ENSG00000225876.1;alternative_source_transcripts=ENST00000426199.1;gene_id=HG002_chrY_G0000785;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000225876;gene_sources=liftoff;ID=HG002_chrY_G0000785;Name=ENSG00000225876
HG002_chrY	CAT	transcript	27055968	27056190	1000	-	.	source_transcript=ENST00000426199.1;source_transcript_name=ENST00000426199;source_gene=ENSG00000225876.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225876.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426199.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000225876;alternative_source_transcripts=ENST00000426199.1;transcript_id=HG002_chrY_T0002084;gene_id=HG002_chrY_G0000785;Parent=HG002_chrY_G0000785;transcript_name=HG002_chrY_T0002084;gene_name=ENSG00000225876;ID=HG002_chrY_T0002084;Name=ENSG00000225876
HG002_chrY	CAT	exon	27055968	27056190	.	-	.	source_transcript=ENST00000426199.1;source_transcript_name=ENST00000426199;source_gene=ENSG00000225876.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225876.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000225876;alternative_source_transcripts=ENST00000426199.1;transcript_id=HG002_chrY_T0002084;gene_id=HG002_chrY_G0000785;Parent=HG002_chrY_T0002084;transcript_name=HG002_chrY_T0002084;gene_name=ENSG00000225876;ID=exon:HG002_chrY_T0002084:0;Name=ENSG00000225876;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	27059001	27059138	.	+	.	source_gene_common_name=SNORA70;source_gene=ENSG00000251796.1;alternative_source_transcripts=ENST00000515987.1;gene_id=HG002_chrY_G0000786;gene_biotype=snoRNA;gene_name=SNORA70;gene_sources=liftoff;ID=HG002_chrY_G0000786;Name=SNORA70
HG002_chrY	CAT	transcript	27059001	27059138	1000	+	.	source_transcript=ENST00000515987.1;source_transcript_name=SNORA70.11-201;source_gene=ENSG00000251796.1;source_gene_biotype=snoRNA;original_gene_id=ENSG00000251796.1;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=ENST00000515987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515987.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNORA70;alternative_source_transcripts=ENST00000515987.1;transcript_id=HG002_chrY_T0002085;gene_id=HG002_chrY_G0000786;Parent=HG002_chrY_G0000786;transcript_name=HG002_chrY_T0002085;gene_name=SNORA70;ID=HG002_chrY_T0002085;Name=SNORA70
HG002_chrY	CAT	exon	27059001	27059138	.	+	.	source_transcript=ENST00000515987.1;source_transcript_name=SNORA70.11-201;source_gene=ENSG00000251796.1;source_gene_biotype=snoRNA;original_gene_id=ENSG00000251796.1;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=ENST00000515987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515987.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNORA70;alternative_source_transcripts=ENST00000515987.1;transcript_id=HG002_chrY_T0002085;gene_id=HG002_chrY_G0000786;Parent=HG002_chrY_T0002085;transcript_name=HG002_chrY_T0002085;gene_name=SNORA70;ID=exon:HG002_chrY_T0002085:0;Name=SNORA70;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	27089540	27166035	.	-	.	source_gene_common_name=PPP1R12BP1;source_gene=ENSG00000229238.3;gene_id=HG002_chrY_G0000787;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=PPP1R12BP1;gene_sources=liftoff;ID=HG002_chrY_G0000787;Name=PPP1R12BP1
HG002_chrY	CAT	transcript	27089540	27166035	1000	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG002_chrY_T0002086;gene_id=HG002_chrY_G0000787;Parent=HG002_chrY_G0000787;transcript_name=HG002_chrY_T0002086;gene_name=PPP1R12BP1;ID=HG002_chrY_T0002086;Name=PPP1R12BP1
HG002_chrY	CAT	exon	27089540	27089581	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG002_chrY_T0002086;gene_id=HG002_chrY_G0000787;Parent=HG002_chrY_T0002086;transcript_name=HG002_chrY_T0002086;gene_name=PPP1R12BP1;ID=exon:HG002_chrY_T0002086:0;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27089582	27090681	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG002_chrY_T0002086;gene_id=HG002_chrY_G0000787;Parent=HG002_chrY_T0002086;transcript_name=HG002_chrY_T0002086;gene_name=PPP1R12BP1;ID=intron:HG002_chrY_T0002086:0;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27090682	27090794	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG002_chrY_T0002086;gene_id=HG002_chrY_G0000787;Parent=HG002_chrY_T0002086;transcript_name=HG002_chrY_T0002086;gene_name=PPP1R12BP1;ID=exon:HG002_chrY_T0002086:1;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27090795	27090882	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG002_chrY_T0002086;gene_id=HG002_chrY_G0000787;Parent=HG002_chrY_T0002086;transcript_name=HG002_chrY_T0002086;gene_name=PPP1R12BP1;ID=intron:HG002_chrY_T0002086:1;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27090883	27091072	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG002_chrY_T0002086;gene_id=HG002_chrY_G0000787;Parent=HG002_chrY_T0002086;transcript_name=HG002_chrY_T0002086;gene_name=PPP1R12BP1;ID=exon:HG002_chrY_T0002086:2;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27091073	27093042	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG002_chrY_T0002086;gene_id=HG002_chrY_G0000787;Parent=HG002_chrY_T0002086;transcript_name=HG002_chrY_T0002086;gene_name=PPP1R12BP1;ID=intron:HG002_chrY_T0002086:2;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27093043	27093246	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG002_chrY_T0002086;gene_id=HG002_chrY_G0000787;Parent=HG002_chrY_T0002086;transcript_name=HG002_chrY_T0002086;gene_name=PPP1R12BP1;ID=exon:HG002_chrY_T0002086:3;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27093247	27102663	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG002_chrY_T0002086;gene_id=HG002_chrY_G0000787;Parent=HG002_chrY_T0002086;transcript_name=HG002_chrY_T0002086;gene_name=PPP1R12BP1;ID=intron:HG002_chrY_T0002086:3;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27102664	27102753	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG002_chrY_T0002086;gene_id=HG002_chrY_G0000787;Parent=HG002_chrY_T0002086;transcript_name=HG002_chrY_T0002086;gene_name=PPP1R12BP1;ID=exon:HG002_chrY_T0002086:4;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27102754	27140566	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG002_chrY_T0002086;gene_id=HG002_chrY_G0000787;Parent=HG002_chrY_T0002086;transcript_name=HG002_chrY_T0002086;gene_name=PPP1R12BP1;ID=intron:HG002_chrY_T0002086:4;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27140567	27140749	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG002_chrY_T0002086;gene_id=HG002_chrY_G0000787;Parent=HG002_chrY_T0002086;transcript_name=HG002_chrY_T0002086;gene_name=PPP1R12BP1;ID=exon:HG002_chrY_T0002086:5;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27140750	27144546	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG002_chrY_T0002086;gene_id=HG002_chrY_G0000787;Parent=HG002_chrY_T0002086;transcript_name=HG002_chrY_T0002086;gene_name=PPP1R12BP1;ID=intron:HG002_chrY_T0002086:5;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27144547	27144686	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG002_chrY_T0002086;gene_id=HG002_chrY_G0000787;Parent=HG002_chrY_T0002086;transcript_name=HG002_chrY_T0002086;gene_name=PPP1R12BP1;ID=exon:HG002_chrY_T0002086:6;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27144687	27145342	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG002_chrY_T0002086;gene_id=HG002_chrY_G0000787;Parent=HG002_chrY_T0002086;transcript_name=HG002_chrY_T0002086;gene_name=PPP1R12BP1;ID=intron:HG002_chrY_T0002086:6;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27145343	27145422	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG002_chrY_T0002086;gene_id=HG002_chrY_G0000787;Parent=HG002_chrY_T0002086;transcript_name=HG002_chrY_T0002086;gene_name=PPP1R12BP1;ID=exon:HG002_chrY_T0002086:7;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27145423	27147263	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG002_chrY_T0002086;gene_id=HG002_chrY_G0000787;Parent=HG002_chrY_T0002086;transcript_name=HG002_chrY_T0002086;gene_name=PPP1R12BP1;ID=intron:HG002_chrY_T0002086:7;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27147264	27147337	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG002_chrY_T0002086;gene_id=HG002_chrY_G0000787;Parent=HG002_chrY_T0002086;transcript_name=HG002_chrY_T0002086;gene_name=PPP1R12BP1;ID=exon:HG002_chrY_T0002086:8;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27147338	27148994	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG002_chrY_T0002086;gene_id=HG002_chrY_G0000787;Parent=HG002_chrY_T0002086;transcript_name=HG002_chrY_T0002086;gene_name=PPP1R12BP1;ID=intron:HG002_chrY_T0002086:8;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27148995	27149139	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG002_chrY_T0002086;gene_id=HG002_chrY_G0000787;Parent=HG002_chrY_T0002086;transcript_name=HG002_chrY_T0002086;gene_name=PPP1R12BP1;ID=exon:HG002_chrY_T0002086:9;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27149140	27150452	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG002_chrY_T0002086;gene_id=HG002_chrY_G0000787;Parent=HG002_chrY_T0002086;transcript_name=HG002_chrY_T0002086;gene_name=PPP1R12BP1;ID=intron:HG002_chrY_T0002086:9;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27150453	27150612	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG002_chrY_T0002086;gene_id=HG002_chrY_G0000787;Parent=HG002_chrY_T0002086;transcript_name=HG002_chrY_T0002086;gene_name=PPP1R12BP1;ID=exon:HG002_chrY_T0002086:10;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27150613	27160077	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG002_chrY_T0002086;gene_id=HG002_chrY_G0000787;Parent=HG002_chrY_T0002086;transcript_name=HG002_chrY_T0002086;gene_name=PPP1R12BP1;ID=intron:HG002_chrY_T0002086:10;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27160078	27160196	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG002_chrY_T0002086;gene_id=HG002_chrY_G0000787;Parent=HG002_chrY_T0002086;transcript_name=HG002_chrY_T0002086;gene_name=PPP1R12BP1;ID=exon:HG002_chrY_T0002086:11;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27160197	27165904	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG002_chrY_T0002086;gene_id=HG002_chrY_G0000787;Parent=HG002_chrY_T0002086;transcript_name=HG002_chrY_T0002086;gene_name=PPP1R12BP1;ID=intron:HG002_chrY_T0002086:11;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27165905	27166035	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=HG002_chrY_T0002086;gene_id=HG002_chrY_G0000787;Parent=HG002_chrY_T0002086;transcript_name=HG002_chrY_T0002086;gene_name=PPP1R12BP1;ID=exon:HG002_chrY_T0002086:12;Name=PPP1R12BP1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	27172606	27172709	.	+	.	source_gene_common_name=RNU6-1314P;source_gene=ENSG00000252948.1;alternative_source_transcripts=ENST00000517139.1;gene_id=HG002_chrY_G0000788;gene_biotype=snRNA;gene_name=RNU6-1314P;gene_sources=liftoff;ID=HG002_chrY_G0000788;Name=RNU6-1314P
HG002_chrY	CAT	transcript	27172606	27172709	1000	+	.	source_transcript=ENST00000517139.1;source_transcript_name=RNU6-1314P-201;source_gene=ENSG00000252948.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252948.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000517139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000517139.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-1314P;alternative_source_transcripts=ENST00000517139.1;transcript_id=HG002_chrY_T0002087;gene_id=HG002_chrY_G0000788;Parent=HG002_chrY_G0000788;transcript_name=HG002_chrY_T0002087;gene_name=RNU6-1314P;ID=HG002_chrY_T0002087;Name=RNU6-1314P
HG002_chrY	CAT	exon	27172606	27172709	.	+	.	source_transcript=ENST00000517139.1;source_transcript_name=RNU6-1314P-201;source_gene=ENSG00000252948.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252948.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000517139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000517139.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-1314P;alternative_source_transcripts=ENST00000517139.1;transcript_id=HG002_chrY_T0002087;gene_id=HG002_chrY_G0000788;Parent=HG002_chrY_T0002087;transcript_name=HG002_chrY_T0002087;gene_name=RNU6-1314P;ID=exon:HG002_chrY_T0002087:0;Name=RNU6-1314P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	27212228	27212847	.	+	.	source_gene_common_name=CYCSP48;source_gene=ENSG00000233843.1;alternative_source_transcripts=ENST00000417124.1;gene_id=HG002_chrY_G0000789;gene_biotype=processed_pseudogene;gene_name=CYCSP48;gene_sources=liftoff;ID=HG002_chrY_G0000789;Name=CYCSP48
HG002_chrY	CAT	transcript	27212228	27212847	1000	+	.	source_transcript=ENST00000417124.1;source_transcript_name=CYCSP48-201;source_gene=ENSG00000233843.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233843.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000417124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417124.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP48;alternative_source_transcripts=ENST00000417124.1;transcript_id=HG002_chrY_T0002088;gene_id=HG002_chrY_G0000789;Parent=HG002_chrY_G0000789;transcript_name=HG002_chrY_T0002088;gene_name=CYCSP48;ID=HG002_chrY_T0002088;Name=CYCSP48
HG002_chrY	CAT	exon	27212228	27212278	.	+	.	source_transcript=ENST00000417124.1;source_transcript_name=CYCSP48-201;source_gene=ENSG00000233843.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233843.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000417124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP48;alternative_source_transcripts=ENST00000417124.1;transcript_id=HG002_chrY_T0002088;gene_id=HG002_chrY_G0000789;Parent=HG002_chrY_T0002088;transcript_name=HG002_chrY_T0002088;gene_name=CYCSP48;ID=exon:HG002_chrY_T0002088:0;Name=CYCSP48;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27212279	27212575	.	+	.	source_transcript=ENST00000417124.1;source_transcript_name=CYCSP48-201;source_gene=ENSG00000233843.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233843.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000417124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP48;alternative_source_transcripts=ENST00000417124.1;transcript_id=HG002_chrY_T0002088;gene_id=HG002_chrY_G0000789;Parent=HG002_chrY_T0002088;transcript_name=HG002_chrY_T0002088;gene_name=CYCSP48;ID=intron:HG002_chrY_T0002088:0;Name=CYCSP48;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27212576	27212847	.	+	.	source_transcript=ENST00000417124.1;source_transcript_name=CYCSP48-201;source_gene=ENSG00000233843.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233843.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000417124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP48;alternative_source_transcripts=ENST00000417124.1;transcript_id=HG002_chrY_T0002088;gene_id=HG002_chrY_G0000789;Parent=HG002_chrY_T0002088;transcript_name=HG002_chrY_T0002088;gene_name=CYCSP48;ID=exon:HG002_chrY_T0002088:1;Name=CYCSP48;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	27220775	27319900	.	+	.	source_gene_common_name=ENSG00000294742;source_gene=ENSG00000294742.1;gene_id=HG002_chrY_G0000790;gene_biotype=lncRNA;gene_name=ENSG00000294742;gene_sources=liftoff;ID=HG002_chrY_G0000790;Name=ENSG00000294742
HG002_chrY	CAT	transcript	27220775	27265734	1000	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002089;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_G0000790;transcript_name=HG002_chrY_T0002089;gene_name=ENSG00000294742;ID=HG002_chrY_T0002089;Name=ENSG00000294742
HG002_chrY	CAT	exon	27220775	27220867	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002089;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002089;transcript_name=HG002_chrY_T0002089;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002089:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27220868	27221315	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002089;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002089;transcript_name=HG002_chrY_T0002089;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002089:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27221316	27221562	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002089;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002089;transcript_name=HG002_chrY_T0002089;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002089:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27221563	27248577	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002089;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002089;transcript_name=HG002_chrY_T0002089;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002089:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27248578	27248606	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002089;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002089;transcript_name=HG002_chrY_T0002089;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002089:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27248607	27248700	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002089;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002089;transcript_name=HG002_chrY_T0002089;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002089:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27248701	27248773	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002089;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002089;transcript_name=HG002_chrY_T0002089;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002089:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27248774	27265630	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002089;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002089;transcript_name=HG002_chrY_T0002089;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002089:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27265631	27265734	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002089;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002089;transcript_name=HG002_chrY_T0002089;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002089:4;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	27220791	27250651	1000	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002090;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_G0000790;transcript_name=HG002_chrY_T0002090;gene_name=ENSG00000294742;ID=HG002_chrY_T0002090;Name=ENSG00000294742
HG002_chrY	CAT	exon	27220791	27220867	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002090;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002090;transcript_name=HG002_chrY_T0002090;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002090:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27220868	27221315	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002090;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002090;transcript_name=HG002_chrY_T0002090;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002090:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27221316	27221562	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002090;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002090;transcript_name=HG002_chrY_T0002090;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002090:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27221563	27248577	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002090;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002090;transcript_name=HG002_chrY_T0002090;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002090:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27248578	27248606	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002090;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002090;transcript_name=HG002_chrY_T0002090;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002090:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27248607	27250455	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002090;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002090;transcript_name=HG002_chrY_T0002090;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002090:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27250456	27250651	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002090;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002090;transcript_name=HG002_chrY_T0002090;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002090:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	27220796	27250585	1000	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002091;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_G0000790;transcript_name=HG002_chrY_T0002091;gene_name=ENSG00000294742;ID=HG002_chrY_T0002091;Name=ENSG00000294742
HG002_chrY	CAT	exon	27220796	27220867	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002091;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002091;transcript_name=HG002_chrY_T0002091;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002091:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27220868	27221315	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002091;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002091;transcript_name=HG002_chrY_T0002091;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002091:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27221316	27221562	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002091;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002091;transcript_name=HG002_chrY_T0002091;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002091:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27221563	27234623	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002091;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002091;transcript_name=HG002_chrY_T0002091;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002091:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27234624	27234691	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002091;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002091;transcript_name=HG002_chrY_T0002091;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002091:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27234692	27248577	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002091;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002091;transcript_name=HG002_chrY_T0002091;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002091:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27248578	27248606	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002091;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002091;transcript_name=HG002_chrY_T0002091;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002091:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27248607	27250455	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002091;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002091;transcript_name=HG002_chrY_T0002091;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002091:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27250456	27250585	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002091;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002091;transcript_name=HG002_chrY_T0002091;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002091:4;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	27220796	27250654	1000	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002092;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_G0000790;transcript_name=HG002_chrY_T0002092;gene_name=ENSG00000294742;ID=HG002_chrY_T0002092;Name=ENSG00000294742
HG002_chrY	CAT	exon	27220796	27220867	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002092;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002092;transcript_name=HG002_chrY_T0002092;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002092:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27220868	27221315	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002092;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002092;transcript_name=HG002_chrY_T0002092;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002092:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27221316	27221562	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002092;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002092;transcript_name=HG002_chrY_T0002092;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002092:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27221563	27248577	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002092;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002092;transcript_name=HG002_chrY_T0002092;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002092:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27248578	27248606	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002092;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002092;transcript_name=HG002_chrY_T0002092;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002092:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27248607	27248700	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002092;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002092;transcript_name=HG002_chrY_T0002092;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002092:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27248701	27248773	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002092;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002092;transcript_name=HG002_chrY_T0002092;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002092:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27248774	27250455	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002092;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002092;transcript_name=HG002_chrY_T0002092;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002092:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27250456	27250654	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002092;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002092;transcript_name=HG002_chrY_T0002092;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002092:4;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	27220796	27319900	1000	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002093;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_G0000790;transcript_name=HG002_chrY_T0002093;gene_name=ENSG00000294742;ID=HG002_chrY_T0002093;Name=ENSG00000294742
HG002_chrY	CAT	exon	27220796	27220867	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002093;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002093;transcript_name=HG002_chrY_T0002093;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002093:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27220868	27221315	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002093;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002093;transcript_name=HG002_chrY_T0002093;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002093:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27221316	27221562	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002093;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002093;transcript_name=HG002_chrY_T0002093;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002093:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27221563	27248577	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002093;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002093;transcript_name=HG002_chrY_T0002093;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002093:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27248578	27248606	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002093;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002093;transcript_name=HG002_chrY_T0002093;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002093:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27248607	27250577	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002093;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002093;transcript_name=HG002_chrY_T0002093;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002093:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27250578	27250650	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002093;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002093;transcript_name=HG002_chrY_T0002093;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002093:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27250651	27252416	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002093;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002093;transcript_name=HG002_chrY_T0002093;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002093:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27252417	27252447	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002093;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002093;transcript_name=HG002_chrY_T0002093;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002093:4;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27252448	27254232	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002093;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002093;transcript_name=HG002_chrY_T0002093;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002093:4;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27254233	27254408	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002093;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002093;transcript_name=HG002_chrY_T0002093;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002093:5;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27254409	27265630	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002093;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002093;transcript_name=HG002_chrY_T0002093;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002093:5;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27265631	27265734	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002093;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002093;transcript_name=HG002_chrY_T0002093;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002093:6;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27265735	27319866	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002093;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002093;transcript_name=HG002_chrY_T0002093;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002093:6;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27319867	27319900	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002093;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002093;transcript_name=HG002_chrY_T0002093;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002093:7;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	27220818	27265719	1000	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002094;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_G0000790;transcript_name=HG002_chrY_T0002094;gene_name=ENSG00000294742;ID=HG002_chrY_T0002094;Name=ENSG00000294742
HG002_chrY	CAT	exon	27220818	27220867	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002094;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002094;transcript_name=HG002_chrY_T0002094;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002094:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27220868	27221315	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002094;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002094;transcript_name=HG002_chrY_T0002094;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002094:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27221316	27221562	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002094;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002094;transcript_name=HG002_chrY_T0002094;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002094:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27221563	27248577	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002094;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002094;transcript_name=HG002_chrY_T0002094;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002094:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27248578	27248606	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002094;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002094;transcript_name=HG002_chrY_T0002094;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002094:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27248607	27265630	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002094;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002094;transcript_name=HG002_chrY_T0002094;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002094:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27265631	27265719	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002094;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002094;transcript_name=HG002_chrY_T0002094;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002094:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	27220822	27250595	1000	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002095;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_G0000790;transcript_name=HG002_chrY_T0002095;gene_name=ENSG00000294742;ID=HG002_chrY_T0002095;Name=ENSG00000294742
HG002_chrY	CAT	exon	27220822	27220867	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002095;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002095;transcript_name=HG002_chrY_T0002095;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002095:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27220868	27221315	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002095;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002095;transcript_name=HG002_chrY_T0002095;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002095:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27221316	27221562	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002095;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002095;transcript_name=HG002_chrY_T0002095;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002095:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27221563	27232036	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002095;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002095;transcript_name=HG002_chrY_T0002095;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002095:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27232037	27232174	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002095;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002095;transcript_name=HG002_chrY_T0002095;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002095:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27232175	27234623	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002095;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002095;transcript_name=HG002_chrY_T0002095;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002095:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27234624	27234691	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002095;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002095;transcript_name=HG002_chrY_T0002095;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002095:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27234692	27238049	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002095;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002095;transcript_name=HG002_chrY_T0002095;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002095:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27238050	27238206	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002095;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002095;transcript_name=HG002_chrY_T0002095;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002095:4;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27238207	27248577	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002095;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002095;transcript_name=HG002_chrY_T0002095;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002095:4;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27248578	27248606	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002095;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002095;transcript_name=HG002_chrY_T0002095;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002095:5;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27248607	27248700	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002095;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002095;transcript_name=HG002_chrY_T0002095;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002095:5;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27248701	27248773	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002095;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002095;transcript_name=HG002_chrY_T0002095;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002095:6;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27248774	27250455	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002095;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002095;transcript_name=HG002_chrY_T0002095;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002095:6;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27250456	27250595	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002095;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002095;transcript_name=HG002_chrY_T0002095;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002095:7;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	27220870	27250639	1000	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002096;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_G0000790;transcript_name=HG002_chrY_T0002096;gene_name=ENSG00000294742;ID=HG002_chrY_T0002096;Name=ENSG00000294742
HG002_chrY	CAT	exon	27220870	27220967	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002096;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002096;transcript_name=HG002_chrY_T0002096;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002096:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27220968	27221315	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002096;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002096;transcript_name=HG002_chrY_T0002096;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002096:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27221316	27221562	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002096;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002096;transcript_name=HG002_chrY_T0002096;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002096:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27221563	27248577	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002096;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002096;transcript_name=HG002_chrY_T0002096;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002096:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27248578	27248606	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002096;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002096;transcript_name=HG002_chrY_T0002096;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002096:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27248607	27250455	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002096;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002096;transcript_name=HG002_chrY_T0002096;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002096:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27250456	27250639	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002096;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002096;transcript_name=HG002_chrY_T0002096;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002096:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	27221315	27265721	1000	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002097;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_G0000790;transcript_name=HG002_chrY_T0002097;gene_name=ENSG00000294742;ID=HG002_chrY_T0002097;Name=ENSG00000294742
HG002_chrY	CAT	exon	27221315	27221562	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002097;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002097;transcript_name=HG002_chrY_T0002097;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002097:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27221563	27248577	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002097;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002097;transcript_name=HG002_chrY_T0002097;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002097:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27248578	27248606	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002097;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002097;transcript_name=HG002_chrY_T0002097;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002097:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27248607	27250577	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002097;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002097;transcript_name=HG002_chrY_T0002097;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002097:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27250578	27250650	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002097;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002097;transcript_name=HG002_chrY_T0002097;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002097:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27250651	27252416	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002097;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002097;transcript_name=HG002_chrY_T0002097;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002097:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27252417	27252447	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002097;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002097;transcript_name=HG002_chrY_T0002097;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002097:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27252448	27254229	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002097;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002097;transcript_name=HG002_chrY_T0002097;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002097:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27254230	27254408	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002097;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002097;transcript_name=HG002_chrY_T0002097;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002097:4;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27254409	27265630	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002097;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002097;transcript_name=HG002_chrY_T0002097;gene_name=ENSG00000294742;ID=intron:HG002_chrY_T0002097:4;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27265631	27265721	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG002_chrY_T0002097;gene_id=HG002_chrY_G0000790;Parent=HG002_chrY_T0002097;transcript_name=HG002_chrY_T0002097;gene_name=ENSG00000294742;ID=exon:HG002_chrY_T0002097:5;Name=ENSG00000294742;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	27221432	27232178	.	+	.	source_gene_common_name=ANKRD36P1;source_gene=ENSG00000188399.5;gene_id=HG002_chrY_G0000791;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ANKRD36P1;gene_sources=liftoff;ID=HG002_chrY_G0000791;Name=ANKRD36P1
HG002_chrY	CAT	transcript	27221432	27232178	1000	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=HG002_chrY_T0002098;gene_id=HG002_chrY_G0000791;Parent=HG002_chrY_G0000791;transcript_name=HG002_chrY_T0002098;gene_name=ANKRD36P1;ID=HG002_chrY_T0002098;Name=ANKRD36P1
HG002_chrY	CAT	exon	27221432	27221562	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=HG002_chrY_T0002098;gene_id=HG002_chrY_G0000791;Parent=HG002_chrY_T0002098;transcript_name=HG002_chrY_T0002098;gene_name=ANKRD36P1;ID=exon:HG002_chrY_T0002098:0;Name=ANKRD36P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27221563	27225664	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=HG002_chrY_T0002098;gene_id=HG002_chrY_G0000791;Parent=HG002_chrY_T0002098;transcript_name=HG002_chrY_T0002098;gene_name=ANKRD36P1;ID=intron:HG002_chrY_T0002098:0;Name=ANKRD36P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27225665	27225779	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=HG002_chrY_T0002098;gene_id=HG002_chrY_G0000791;Parent=HG002_chrY_T0002098;transcript_name=HG002_chrY_T0002098;gene_name=ANKRD36P1;ID=exon:HG002_chrY_T0002098:1;Name=ANKRD36P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27225780	27225945	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=HG002_chrY_T0002098;gene_id=HG002_chrY_G0000791;Parent=HG002_chrY_T0002098;transcript_name=HG002_chrY_T0002098;gene_name=ANKRD36P1;ID=intron:HG002_chrY_T0002098:1;Name=ANKRD36P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27225946	27226119	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=HG002_chrY_T0002098;gene_id=HG002_chrY_G0000791;Parent=HG002_chrY_T0002098;transcript_name=HG002_chrY_T0002098;gene_name=ANKRD36P1;ID=exon:HG002_chrY_T0002098:2;Name=ANKRD36P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27226120	27230460	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=HG002_chrY_T0002098;gene_id=HG002_chrY_G0000791;Parent=HG002_chrY_T0002098;transcript_name=HG002_chrY_T0002098;gene_name=ANKRD36P1;ID=intron:HG002_chrY_T0002098:2;Name=ANKRD36P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27230461	27230557	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=HG002_chrY_T0002098;gene_id=HG002_chrY_G0000791;Parent=HG002_chrY_T0002098;transcript_name=HG002_chrY_T0002098;gene_name=ANKRD36P1;ID=exon:HG002_chrY_T0002098:3;Name=ANKRD36P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27230558	27232036	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=HG002_chrY_T0002098;gene_id=HG002_chrY_G0000791;Parent=HG002_chrY_T0002098;transcript_name=HG002_chrY_T0002098;gene_name=ANKRD36P1;ID=intron:HG002_chrY_T0002098:3;Name=ANKRD36P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27232037	27232178	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=HG002_chrY_T0002098;gene_id=HG002_chrY_G0000791;Parent=HG002_chrY_T0002098;transcript_name=HG002_chrY_T0002098;gene_name=ANKRD36P1;ID=exon:HG002_chrY_T0002098:4;Name=ANKRD36P1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	27265628	27265738	.	+	.	source_gene_common_name=ENSG00000277146;source_gene=ENSG00000277146.1;gene_id=HG002_chrY_G0000792;gene_biotype=transcribed_processed_pseudogene;gene_name=ENSG00000277146;gene_sources=liftoff;ID=HG002_chrY_G0000792;Name=ENSG00000277146
HG002_chrY	CAT	transcript	27265628	27265738	1000	+	.	source_transcript=ENST00000619329.1;source_transcript_name=ENST00000619329;source_gene=ENSG00000277146.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000277146.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000619329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619329.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277146;transcript_id=HG002_chrY_T0002099;gene_id=HG002_chrY_G0000792;Parent=HG002_chrY_G0000792;transcript_name=HG002_chrY_T0002099;gene_name=ENSG00000277146;ID=HG002_chrY_T0002099;Name=ENSG00000277146
HG002_chrY	CAT	exon	27265628	27265738	.	+	.	source_transcript=ENST00000619329.1;source_transcript_name=ENST00000619329;source_gene=ENSG00000277146.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000277146.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000619329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277146;transcript_id=HG002_chrY_T0002099;gene_id=HG002_chrY_G0000792;Parent=HG002_chrY_T0002099;transcript_name=HG002_chrY_T0002099;gene_name=ENSG00000277146;ID=exon:HG002_chrY_T0002099:0;Name=ENSG00000277146;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	27305244	27309204	.	+	.	source_gene_common_name=ENSG00000294758;source_gene=ENSG00000294758.1;alternative_source_transcripts=ENST00000725774.1;gene_id=HG002_chrY_G0000793;gene_biotype=lncRNA;gene_name=ENSG00000294758;gene_sources=liftoff;ID=HG002_chrY_G0000793;Name=ENSG00000294758
HG002_chrY	CAT	transcript	27305244	27309204	1000	+	.	source_transcript=ENST00000725774.1;source_transcript_name=ENST00000725774;source_gene=ENSG00000294758.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294758.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725774.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294758;alternative_source_transcripts=ENST00000725774.1;transcript_id=HG002_chrY_T0002100;gene_id=HG002_chrY_G0000793;Parent=HG002_chrY_G0000793;transcript_name=HG002_chrY_T0002100;gene_name=ENSG00000294758;ID=HG002_chrY_T0002100;Name=ENSG00000294758
HG002_chrY	CAT	exon	27305244	27305282	.	+	.	source_transcript=ENST00000725774.1;source_transcript_name=ENST00000725774;source_gene=ENSG00000294758.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294758.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294758;alternative_source_transcripts=ENST00000725774.1;transcript_id=HG002_chrY_T0002100;gene_id=HG002_chrY_G0000793;Parent=HG002_chrY_T0002100;transcript_name=HG002_chrY_T0002100;gene_name=ENSG00000294758;ID=exon:HG002_chrY_T0002100:0;Name=ENSG00000294758;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27305283	27308524	.	+	.	source_transcript=ENST00000725774.1;source_transcript_name=ENST00000725774;source_gene=ENSG00000294758.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294758.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294758;alternative_source_transcripts=ENST00000725774.1;transcript_id=HG002_chrY_T0002100;gene_id=HG002_chrY_G0000793;Parent=HG002_chrY_T0002100;transcript_name=HG002_chrY_T0002100;gene_name=ENSG00000294758;ID=intron:HG002_chrY_T0002100:0;Name=ENSG00000294758;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27308525	27308581	.	+	.	source_transcript=ENST00000725774.1;source_transcript_name=ENST00000725774;source_gene=ENSG00000294758.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294758.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294758;alternative_source_transcripts=ENST00000725774.1;transcript_id=HG002_chrY_T0002100;gene_id=HG002_chrY_G0000793;Parent=HG002_chrY_T0002100;transcript_name=HG002_chrY_T0002100;gene_name=ENSG00000294758;ID=exon:HG002_chrY_T0002100:1;Name=ENSG00000294758;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27308582	27308940	.	+	.	source_transcript=ENST00000725774.1;source_transcript_name=ENST00000725774;source_gene=ENSG00000294758.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294758.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294758;alternative_source_transcripts=ENST00000725774.1;transcript_id=HG002_chrY_T0002100;gene_id=HG002_chrY_G0000793;Parent=HG002_chrY_T0002100;transcript_name=HG002_chrY_T0002100;gene_name=ENSG00000294758;ID=intron:HG002_chrY_T0002100:1;Name=ENSG00000294758;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27308941	27309204	.	+	.	source_transcript=ENST00000725774.1;source_transcript_name=ENST00000725774;source_gene=ENSG00000294758.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294758.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294758;alternative_source_transcripts=ENST00000725774.1;transcript_id=HG002_chrY_T0002100;gene_id=HG002_chrY_G0000793;Parent=HG002_chrY_T0002100;transcript_name=HG002_chrY_T0002100;gene_name=ENSG00000294758;ID=exon:HG002_chrY_T0002100:2;Name=ENSG00000294758;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	27319867	27391352	.	+	.	source_gene_common_name=TPTE2P4;source_gene=ENSG00000215506.5;gene_id=HG002_chrY_G0000794;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TPTE2P4;gene_sources=liftoff;ID=HG002_chrY_G0000794;Name=TPTE2P4
HG002_chrY	CAT	transcript	27319867	27391352	1000	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_G0000794;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=HG002_chrY_T0002101;Name=TPTE2P4
HG002_chrY	CAT	exon	27319867	27319920	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=exon:HG002_chrY_T0002101:0;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27319921	27326709	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=intron:HG002_chrY_T0002101:0;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27326710	27326763	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=exon:HG002_chrY_T0002101:1;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27326764	27327308	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=intron:HG002_chrY_T0002101:1;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27327309	27327362	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=exon:HG002_chrY_T0002101:2;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27327363	27337504	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=intron:HG002_chrY_T0002101:2;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27337505	27337564	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=exon:HG002_chrY_T0002101:3;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27337565	27344437	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=intron:HG002_chrY_T0002101:3;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27344438	27344488	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=exon:HG002_chrY_T0002101:4;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27344489	27345976	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=intron:HG002_chrY_T0002101:4;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27345977	27346138	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=exon:HG002_chrY_T0002101:5;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27346139	27352622	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=intron:HG002_chrY_T0002101:5;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27352623	27352742	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=exon:HG002_chrY_T0002101:6;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27352743	27354395	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=intron:HG002_chrY_T0002101:6;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27354396	27354495	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=exon:HG002_chrY_T0002101:7;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27354496	27354641	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=intron:HG002_chrY_T0002101:7;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27354642	27354704	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=exon:HG002_chrY_T0002101:8;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27354705	27355436	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=intron:HG002_chrY_T0002101:8;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27355437	27355501	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=exon:HG002_chrY_T0002101:9;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27355502	27368650	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=intron:HG002_chrY_T0002101:9;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27368651	27368715	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=exon:HG002_chrY_T0002101:10;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27368716	27369536	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=intron:HG002_chrY_T0002101:10;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27369537	27369611	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=exon:HG002_chrY_T0002101:11;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27369612	27369709	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=intron:HG002_chrY_T0002101:11;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27369710	27369798	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=exon:HG002_chrY_T0002101:12;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27369799	27375980	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=intron:HG002_chrY_T0002101:12;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27375981	27376041	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=exon:HG002_chrY_T0002101:13;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27376042	27377842	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=intron:HG002_chrY_T0002101:13;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27377843	27377924	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=exon:HG002_chrY_T0002101:14;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27377925	27381524	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=intron:HG002_chrY_T0002101:14;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27381525	27381630	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=exon:HG002_chrY_T0002101:15;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27381631	27383547	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=intron:HG002_chrY_T0002101:15;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27383548	27383627	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=exon:HG002_chrY_T0002101:16;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27383628	27387588	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=intron:HG002_chrY_T0002101:16;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27387589	27387679	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=exon:HG002_chrY_T0002101:17;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27387680	27389088	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=intron:HG002_chrY_T0002101:17;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27389089	27389159	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=exon:HG002_chrY_T0002101:18;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27389160	27391250	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=intron:HG002_chrY_T0002101:18;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27391251	27391352	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG002_chrY_T0002101;gene_id=HG002_chrY_G0000794;Parent=HG002_chrY_T0002101;transcript_name=HG002_chrY_T0002101;gene_name=TPTE2P4;ID=exon:HG002_chrY_T0002101:19;Name=TPTE2P4;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	27361078	27361396	.	+	.	source_gene_common_name=CYCSP49;source_gene=ENSG00000224240.1;alternative_source_transcripts=ENST00000420810.1;gene_id=HG002_chrY_G0000795;gene_biotype=processed_pseudogene;gene_name=CYCSP49;gene_sources=liftoff;ID=HG002_chrY_G0000795;Name=CYCSP49
HG002_chrY	CAT	transcript	27361078	27361396	1000	+	.	source_transcript=ENST00000420810.1;source_transcript_name=CYCSP49-201;source_gene=ENSG00000224240.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224240.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420810.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP49;alternative_source_transcripts=ENST00000420810.1;transcript_id=HG002_chrY_T0002102;gene_id=HG002_chrY_G0000795;Parent=HG002_chrY_G0000795;transcript_name=HG002_chrY_T0002102;gene_name=CYCSP49;ID=HG002_chrY_T0002102;Name=CYCSP49
HG002_chrY	CAT	exon	27361078	27361396	.	+	.	source_transcript=ENST00000420810.1;source_transcript_name=CYCSP49-201;source_gene=ENSG00000224240.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224240.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420810.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP49;alternative_source_transcripts=ENST00000420810.1;transcript_id=HG002_chrY_T0002102;gene_id=HG002_chrY_G0000795;Parent=HG002_chrY_T0002102;transcript_name=HG002_chrY_T0002102;gene_name=CYCSP49;ID=exon:HG002_chrY_T0002102:0;Name=CYCSP49;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	27398306	27403265	.	-	.	source_gene_common_name=SLC25A15P1;source_gene=ENSG00000227629.1;alternative_source_transcripts=ENST00000456738.1;gene_id=HG002_chrY_G0000796;gene_biotype=unprocessed_pseudogene;gene_name=SLC25A15P1;gene_sources=liftoff;ID=HG002_chrY_G0000796;Name=SLC25A15P1
HG002_chrY	CAT	transcript	27398306	27403265	1000	-	.	source_transcript=ENST00000456738.1;source_transcript_name=SLC25A15P1-201;source_gene=ENSG00000227629.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227629.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456738.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A15P1;alternative_source_transcripts=ENST00000456738.1;transcript_id=HG002_chrY_T0002103;gene_id=HG002_chrY_G0000796;Parent=HG002_chrY_G0000796;transcript_name=HG002_chrY_T0002103;gene_name=SLC25A15P1;ID=HG002_chrY_T0002103;Name=SLC25A15P1
HG002_chrY	CAT	exon	27398306	27398430	.	-	.	source_transcript=ENST00000456738.1;source_transcript_name=SLC25A15P1-201;source_gene=ENSG00000227629.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227629.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A15P1;alternative_source_transcripts=ENST00000456738.1;transcript_id=HG002_chrY_T0002103;gene_id=HG002_chrY_G0000796;Parent=HG002_chrY_T0002103;transcript_name=HG002_chrY_T0002103;gene_name=SLC25A15P1;ID=exon:HG002_chrY_T0002103:0;Name=SLC25A15P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27398431	27399061	.	-	.	source_transcript=ENST00000456738.1;source_transcript_name=SLC25A15P1-201;source_gene=ENSG00000227629.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227629.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A15P1;alternative_source_transcripts=ENST00000456738.1;transcript_id=HG002_chrY_T0002103;gene_id=HG002_chrY_G0000796;Parent=HG002_chrY_T0002103;transcript_name=HG002_chrY_T0002103;gene_name=SLC25A15P1;ID=intron:HG002_chrY_T0002103:0;Name=SLC25A15P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27399062	27399224	.	-	.	source_transcript=ENST00000456738.1;source_transcript_name=SLC25A15P1-201;source_gene=ENSG00000227629.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227629.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A15P1;alternative_source_transcripts=ENST00000456738.1;transcript_id=HG002_chrY_T0002103;gene_id=HG002_chrY_G0000796;Parent=HG002_chrY_T0002103;transcript_name=HG002_chrY_T0002103;gene_name=SLC25A15P1;ID=exon:HG002_chrY_T0002103:1;Name=SLC25A15P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27399225	27403211	.	-	.	source_transcript=ENST00000456738.1;source_transcript_name=SLC25A15P1-201;source_gene=ENSG00000227629.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227629.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A15P1;alternative_source_transcripts=ENST00000456738.1;transcript_id=HG002_chrY_T0002103;gene_id=HG002_chrY_G0000796;Parent=HG002_chrY_T0002103;transcript_name=HG002_chrY_T0002103;gene_name=SLC25A15P1;ID=intron:HG002_chrY_T0002103:1;Name=SLC25A15P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27403212	27403265	.	-	.	source_transcript=ENST00000456738.1;source_transcript_name=SLC25A15P1-201;source_gene=ENSG00000227629.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227629.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A15P1;alternative_source_transcripts=ENST00000456738.1;transcript_id=HG002_chrY_T0002103;gene_id=HG002_chrY_G0000796;Parent=HG002_chrY_T0002103;transcript_name=HG002_chrY_T0002103;gene_name=SLC25A15P1;ID=exon:HG002_chrY_T0002103:2;Name=SLC25A15P1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	27406515	27446321	.	-	.	source_gene_common_name=PARP4P1;source_gene=ENSG00000237917.1;alternative_source_transcripts=ENST00000435945.1;gene_id=HG002_chrY_G0000797;gene_biotype=unprocessed_pseudogene;gene_name=PARP4P1;gene_sources=liftoff;ID=HG002_chrY_G0000797;Name=PARP4P1
HG002_chrY	CAT	transcript	27406515	27446321	1000	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG002_chrY_T0002104;gene_id=HG002_chrY_G0000797;Parent=HG002_chrY_G0000797;transcript_name=HG002_chrY_T0002104;gene_name=PARP4P1;ID=HG002_chrY_T0002104;Name=PARP4P1
HG002_chrY	CAT	exon	27406515	27406709	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG002_chrY_T0002104;gene_id=HG002_chrY_G0000797;Parent=HG002_chrY_T0002104;transcript_name=HG002_chrY_T0002104;gene_name=PARP4P1;ID=exon:HG002_chrY_T0002104:0;Name=PARP4P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27406710	27412554	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG002_chrY_T0002104;gene_id=HG002_chrY_G0000797;Parent=HG002_chrY_T0002104;transcript_name=HG002_chrY_T0002104;gene_name=PARP4P1;ID=intron:HG002_chrY_T0002104:0;Name=PARP4P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27412555	27412686	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG002_chrY_T0002104;gene_id=HG002_chrY_G0000797;Parent=HG002_chrY_T0002104;transcript_name=HG002_chrY_T0002104;gene_name=PARP4P1;ID=exon:HG002_chrY_T0002104:1;Name=PARP4P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27412687	27423377	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG002_chrY_T0002104;gene_id=HG002_chrY_G0000797;Parent=HG002_chrY_T0002104;transcript_name=HG002_chrY_T0002104;gene_name=PARP4P1;ID=intron:HG002_chrY_T0002104:1;Name=PARP4P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27423378	27423472	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG002_chrY_T0002104;gene_id=HG002_chrY_G0000797;Parent=HG002_chrY_T0002104;transcript_name=HG002_chrY_T0002104;gene_name=PARP4P1;ID=exon:HG002_chrY_T0002104:2;Name=PARP4P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27423473	27425818	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG002_chrY_T0002104;gene_id=HG002_chrY_G0000797;Parent=HG002_chrY_T0002104;transcript_name=HG002_chrY_T0002104;gene_name=PARP4P1;ID=intron:HG002_chrY_T0002104:2;Name=PARP4P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27425819	27426627	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG002_chrY_T0002104;gene_id=HG002_chrY_G0000797;Parent=HG002_chrY_T0002104;transcript_name=HG002_chrY_T0002104;gene_name=PARP4P1;ID=exon:HG002_chrY_T0002104:3;Name=PARP4P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27426628	27426960	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG002_chrY_T0002104;gene_id=HG002_chrY_G0000797;Parent=HG002_chrY_T0002104;transcript_name=HG002_chrY_T0002104;gene_name=PARP4P1;ID=intron:HG002_chrY_T0002104:3;Name=PARP4P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27426961	27427198	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG002_chrY_T0002104;gene_id=HG002_chrY_G0000797;Parent=HG002_chrY_T0002104;transcript_name=HG002_chrY_T0002104;gene_name=PARP4P1;ID=exon:HG002_chrY_T0002104:4;Name=PARP4P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27427199	27433440	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG002_chrY_T0002104;gene_id=HG002_chrY_G0000797;Parent=HG002_chrY_T0002104;transcript_name=HG002_chrY_T0002104;gene_name=PARP4P1;ID=intron:HG002_chrY_T0002104:4;Name=PARP4P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27433441	27433563	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG002_chrY_T0002104;gene_id=HG002_chrY_G0000797;Parent=HG002_chrY_T0002104;transcript_name=HG002_chrY_T0002104;gene_name=PARP4P1;ID=exon:HG002_chrY_T0002104:5;Name=PARP4P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27433564	27434179	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG002_chrY_T0002104;gene_id=HG002_chrY_G0000797;Parent=HG002_chrY_T0002104;transcript_name=HG002_chrY_T0002104;gene_name=PARP4P1;ID=intron:HG002_chrY_T0002104:5;Name=PARP4P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27434180	27434276	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG002_chrY_T0002104;gene_id=HG002_chrY_G0000797;Parent=HG002_chrY_T0002104;transcript_name=HG002_chrY_T0002104;gene_name=PARP4P1;ID=exon:HG002_chrY_T0002104:6;Name=PARP4P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27434277	27435253	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG002_chrY_T0002104;gene_id=HG002_chrY_G0000797;Parent=HG002_chrY_T0002104;transcript_name=HG002_chrY_T0002104;gene_name=PARP4P1;ID=intron:HG002_chrY_T0002104:6;Name=PARP4P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27435254	27435334	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG002_chrY_T0002104;gene_id=HG002_chrY_G0000797;Parent=HG002_chrY_T0002104;transcript_name=HG002_chrY_T0002104;gene_name=PARP4P1;ID=exon:HG002_chrY_T0002104:7;Name=PARP4P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27435335	27439610	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG002_chrY_T0002104;gene_id=HG002_chrY_G0000797;Parent=HG002_chrY_T0002104;transcript_name=HG002_chrY_T0002104;gene_name=PARP4P1;ID=intron:HG002_chrY_T0002104:7;Name=PARP4P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27439611	27439690	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG002_chrY_T0002104;gene_id=HG002_chrY_G0000797;Parent=HG002_chrY_T0002104;transcript_name=HG002_chrY_T0002104;gene_name=PARP4P1;ID=exon:HG002_chrY_T0002104:8;Name=PARP4P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27439691	27439938	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG002_chrY_T0002104;gene_id=HG002_chrY_G0000797;Parent=HG002_chrY_T0002104;transcript_name=HG002_chrY_T0002104;gene_name=PARP4P1;ID=intron:HG002_chrY_T0002104:8;Name=PARP4P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27439939	27440105	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG002_chrY_T0002104;gene_id=HG002_chrY_G0000797;Parent=HG002_chrY_T0002104;transcript_name=HG002_chrY_T0002104;gene_name=PARP4P1;ID=exon:HG002_chrY_T0002104:9;Name=PARP4P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27440106	27442314	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG002_chrY_T0002104;gene_id=HG002_chrY_G0000797;Parent=HG002_chrY_T0002104;transcript_name=HG002_chrY_T0002104;gene_name=PARP4P1;ID=intron:HG002_chrY_T0002104:9;Name=PARP4P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27442315	27442417	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG002_chrY_T0002104;gene_id=HG002_chrY_G0000797;Parent=HG002_chrY_T0002104;transcript_name=HG002_chrY_T0002104;gene_name=PARP4P1;ID=exon:HG002_chrY_T0002104:10;Name=PARP4P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27442418	27445013	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG002_chrY_T0002104;gene_id=HG002_chrY_G0000797;Parent=HG002_chrY_T0002104;transcript_name=HG002_chrY_T0002104;gene_name=PARP4P1;ID=intron:HG002_chrY_T0002104:10;Name=PARP4P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27445014	27445100	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG002_chrY_T0002104;gene_id=HG002_chrY_G0000797;Parent=HG002_chrY_T0002104;transcript_name=HG002_chrY_T0002104;gene_name=PARP4P1;ID=exon:HG002_chrY_T0002104:11;Name=PARP4P1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	27445101	27446191	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG002_chrY_T0002104;gene_id=HG002_chrY_G0000797;Parent=HG002_chrY_T0002104;transcript_name=HG002_chrY_T0002104;gene_name=PARP4P1;ID=intron:HG002_chrY_T0002104:11;Name=PARP4P1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	27446192	27446321	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=HG002_chrY_T0002104;gene_id=HG002_chrY_G0000797;Parent=HG002_chrY_T0002104;transcript_name=HG002_chrY_T0002104;gene_name=PARP4P1;ID=exon:HG002_chrY_T0002104:12;Name=PARP4P1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	27438188	27438827	.	-	.	source_gene_common_name=CCNQP2;source_gene=ENSG00000231514.1;alternative_source_transcripts=ENST00000435741.1;gene_id=HG002_chrY_G0000798;gene_biotype=processed_pseudogene;gene_name=CCNQP2;gene_sources=liftoff;ID=HG002_chrY_G0000798;Name=CCNQP2
HG002_chrY	CAT	transcript	27438188	27438827	1000	-	.	source_transcript=ENST00000435741.1;source_transcript_name=CCNQP2-201;source_gene=ENSG00000231514.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000231514.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000435741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435741.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CCNQP2;alternative_source_transcripts=ENST00000435741.1;transcript_id=HG002_chrY_T0002105;gene_id=HG002_chrY_G0000798;Parent=HG002_chrY_G0000798;transcript_name=HG002_chrY_T0002105;gene_name=CCNQP2;ID=HG002_chrY_T0002105;Name=CCNQP2
HG002_chrY	CAT	exon	27438188	27438827	.	-	.	source_transcript=ENST00000435741.1;source_transcript_name=CCNQP2-201;source_gene=ENSG00000231514.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000231514.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000435741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CCNQP2;alternative_source_transcripts=ENST00000435741.1;transcript_id=HG002_chrY_T0002105;gene_id=HG002_chrY_G0000798;Parent=HG002_chrY_T0002105;transcript_name=HG002_chrY_T0002105;gene_name=CCNQP2;ID=exon:HG002_chrY_T0002105:0;Name=CCNQP2;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	62043251	62043495	.	+	.	source_gene_common_name=CTBP2P1;source_gene=ENSG00000235857.1;alternative_source_transcripts=ENST00000431853.1,ENST00000431853.1;gene_id=HG002_chrY_G0000799;gene_biotype=processed_pseudogene;gene_name=CTBP2P1;gene_sources=liftoff;ID=HG002_chrY_G0000799;Name=CTBP2P1
HG002_chrY	CAT	transcript	62043251	62043495	1000	+	.	source_transcript=ENST00000431853.1;source_transcript_name=CTBP2P1-201;source_gene=ENSG00000235857.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000235857.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431853.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CTBP2P1;alternative_source_transcripts=ENST00000431853.1,ENST00000431853.1;transcript_id=HG002_chrY_T0002106;gene_id=HG002_chrY_G0000799;Parent=HG002_chrY_G0000799;transcript_name=HG002_chrY_T0002106;gene_name=CTBP2P1;ID=HG002_chrY_T0002106;Name=CTBP2P1
HG002_chrY	CAT	exon	62043251	62043495	.	+	.	source_transcript=ENST00000431853.1;source_transcript_name=CTBP2P1-201;source_gene=ENSG00000235857.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000235857.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431853.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CTBP2P1;alternative_source_transcripts=ENST00000431853.1,ENST00000431853.1;transcript_id=HG002_chrY_T0002106;gene_id=HG002_chrY_G0000799;Parent=HG002_chrY_T0002106;transcript_name=HG002_chrY_T0002106;gene_name=CTBP2P1;ID=exon:HG002_chrY_T0002106:0;Name=CTBP2P1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	62069855	62070121	.	+	.	source_gene_common_name=ENSG00000305394;source_gene=ENSG00000305394.1;alternative_source_transcripts=ENST00000810723.1,ENST00000810723.1;gene_id=HG002_chrY_G0000800;gene_biotype=lncRNA;gene_name=ENSG00000305394;gene_sources=liftoff;ID=HG002_chrY_G0000800;Name=ENSG00000305394
HG002_chrY	CAT	transcript	62069855	62070121	1000	+	.	source_transcript=ENST00000810723.1;source_transcript_name=ENST00000810723;source_gene=ENSG00000305394.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305394.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000810723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000810723.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305394;alternative_source_transcripts=ENST00000810723.1,ENST00000810723.1;transcript_id=HG002_chrY_T0002107;gene_id=HG002_chrY_G0000800;Parent=HG002_chrY_G0000800;transcript_name=HG002_chrY_T0002107;gene_name=ENSG00000305394;ID=HG002_chrY_T0002107;Name=ENSG00000305394
HG002_chrY	CAT	exon	62069855	62070121	.	+	.	source_transcript=ENST00000810723.1;source_transcript_name=ENST00000810723;source_gene=ENSG00000305394.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305394.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000810723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000810723.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305394;alternative_source_transcripts=ENST00000810723.1,ENST00000810723.1;transcript_id=HG002_chrY_T0002107;gene_id=HG002_chrY_G0000800;Parent=HG002_chrY_T0002107;transcript_name=HG002_chrY_T0002107;gene_name=ENSG00000305394;ID=exon:HG002_chrY_T0002107:0;Name=ENSG00000305394;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	62107453	62142088	.	-	.	source_gene_common_name=ENSG00000310550;source_gene=ENSG00000310550.1;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;gene_id=HG002_chrY_G0000801;gene_biotype=lncRNA;gene_name=ENSG00000310550;gene_sources=liftoff;ID=HG002_chrY_G0000801;Name=ENSG00000310550
HG002_chrY	CAT	transcript	62107453	62142093	1000	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=HG002_chrY_T0002108;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_G0000801;transcript_name=HG002_chrY_T0002108;gene_name=ENSG00000310550;ID=HG002_chrY_T0002108;Name=ENSG00000310550
HG002_chrY	CAT	exon	62107453	62107556	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=HG002_chrY_T0002108;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002108;transcript_name=HG002_chrY_T0002108;gene_name=ENSG00000310550;ID=exon:HG002_chrY_T0002108:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62107557	62111762	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=HG002_chrY_T0002108;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002108;transcript_name=HG002_chrY_T0002108;gene_name=ENSG00000310550;ID=intron:HG002_chrY_T0002108:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62111763	62111898	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=HG002_chrY_T0002108;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002108;transcript_name=HG002_chrY_T0002108;gene_name=ENSG00000310550;ID=exon:HG002_chrY_T0002108:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62111899	62114092	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=HG002_chrY_T0002108;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002108;transcript_name=HG002_chrY_T0002108;gene_name=ENSG00000310550;ID=intron:HG002_chrY_T0002108:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62114093	62114269	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=HG002_chrY_T0002108;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002108;transcript_name=HG002_chrY_T0002108;gene_name=ENSG00000310550;ID=exon:HG002_chrY_T0002108:2;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62114270	62133041	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=HG002_chrY_T0002108;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002108;transcript_name=HG002_chrY_T0002108;gene_name=ENSG00000310550;ID=intron:HG002_chrY_T0002108:2;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62133042	62133192	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=HG002_chrY_T0002108;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002108;transcript_name=HG002_chrY_T0002108;gene_name=ENSG00000310550;ID=exon:HG002_chrY_T0002108:3;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62133193	62141964	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=HG002_chrY_T0002108;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002108;transcript_name=HG002_chrY_T0002108;gene_name=ENSG00000310550;ID=intron:HG002_chrY_T0002108:3;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62141965	62142093	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=HG002_chrY_T0002108;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002108;transcript_name=HG002_chrY_T0002108;gene_name=ENSG00000310550;ID=exon:HG002_chrY_T0002108:4;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62107460	62142088	1000	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=HG002_chrY_T0002109;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_G0000801;transcript_name=HG002_chrY_T0002109;gene_name=ENSG00000310550;ID=HG002_chrY_T0002109;Name=ENSG00000310550
HG002_chrY	CAT	exon	62107460	62107556	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=HG002_chrY_T0002109;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002109;transcript_name=HG002_chrY_T0002109;gene_name=ENSG00000310550;ID=exon:HG002_chrY_T0002109:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62107557	62111762	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=HG002_chrY_T0002109;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002109;transcript_name=HG002_chrY_T0002109;gene_name=ENSG00000310550;ID=intron:HG002_chrY_T0002109:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62111763	62111898	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=HG002_chrY_T0002109;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002109;transcript_name=HG002_chrY_T0002109;gene_name=ENSG00000310550;ID=exon:HG002_chrY_T0002109:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62111899	62114092	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=HG002_chrY_T0002109;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002109;transcript_name=HG002_chrY_T0002109;gene_name=ENSG00000310550;ID=intron:HG002_chrY_T0002109:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62114093	62114269	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=HG002_chrY_T0002109;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002109;transcript_name=HG002_chrY_T0002109;gene_name=ENSG00000310550;ID=exon:HG002_chrY_T0002109:2;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62114270	62133041	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=HG002_chrY_T0002109;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002109;transcript_name=HG002_chrY_T0002109;gene_name=ENSG00000310550;ID=intron:HG002_chrY_T0002109:2;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62133042	62133192	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=HG002_chrY_T0002109;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002109;transcript_name=HG002_chrY_T0002109;gene_name=ENSG00000310550;ID=exon:HG002_chrY_T0002109:3;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62133193	62141993	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=HG002_chrY_T0002109;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002109;transcript_name=HG002_chrY_T0002109;gene_name=ENSG00000310550;ID=intron:HG002_chrY_T0002109:3;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62141994	62142088	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=HG002_chrY_T0002109;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002109;transcript_name=HG002_chrY_T0002109;gene_name=ENSG00000310550;ID=exon:HG002_chrY_T0002109:4;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62107463	62142088	1000	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=HG002_chrY_T0002110;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_G0000801;transcript_name=HG002_chrY_T0002110;gene_name=ENSG00000310550;ID=HG002_chrY_T0002110;Name=ENSG00000310550
HG002_chrY	CAT	exon	62107463	62107556	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=HG002_chrY_T0002110;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002110;transcript_name=HG002_chrY_T0002110;gene_name=ENSG00000310550;ID=exon:HG002_chrY_T0002110:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62107557	62111762	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=HG002_chrY_T0002110;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002110;transcript_name=HG002_chrY_T0002110;gene_name=ENSG00000310550;ID=intron:HG002_chrY_T0002110:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62111763	62111898	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=HG002_chrY_T0002110;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002110;transcript_name=HG002_chrY_T0002110;gene_name=ENSG00000310550;ID=exon:HG002_chrY_T0002110:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62111899	62113929	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=HG002_chrY_T0002110;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002110;transcript_name=HG002_chrY_T0002110;gene_name=ENSG00000310550;ID=intron:HG002_chrY_T0002110:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62113930	62114269	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=HG002_chrY_T0002110;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002110;transcript_name=HG002_chrY_T0002110;gene_name=ENSG00000310550;ID=exon:HG002_chrY_T0002110:2;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62114270	62141964	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=HG002_chrY_T0002110;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002110;transcript_name=HG002_chrY_T0002110;gene_name=ENSG00000310550;ID=intron:HG002_chrY_T0002110:2;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62141965	62142088	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=HG002_chrY_T0002110;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002110;transcript_name=HG002_chrY_T0002110;gene_name=ENSG00000310550;ID=exon:HG002_chrY_T0002110:3;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62107463	62142034	1000	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=HG002_chrY_T0002111;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_G0000801;transcript_name=HG002_chrY_T0002111;gene_name=ENSG00000310550;ID=HG002_chrY_T0002111;Name=ENSG00000310550
HG002_chrY	CAT	exon	62107463	62107556	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=HG002_chrY_T0002111;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002111;transcript_name=HG002_chrY_T0002111;gene_name=ENSG00000310550;ID=exon:HG002_chrY_T0002111:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62107557	62111762	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=HG002_chrY_T0002111;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002111;transcript_name=HG002_chrY_T0002111;gene_name=ENSG00000310550;ID=intron:HG002_chrY_T0002111:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62111763	62111898	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=HG002_chrY_T0002111;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002111;transcript_name=HG002_chrY_T0002111;gene_name=ENSG00000310550;ID=exon:HG002_chrY_T0002111:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62111899	62114092	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=HG002_chrY_T0002111;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002111;transcript_name=HG002_chrY_T0002111;gene_name=ENSG00000310550;ID=intron:HG002_chrY_T0002111:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62114093	62114269	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=HG002_chrY_T0002111;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002111;transcript_name=HG002_chrY_T0002111;gene_name=ENSG00000310550;ID=exon:HG002_chrY_T0002111:2;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62114270	62141964	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=HG002_chrY_T0002111;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002111;transcript_name=HG002_chrY_T0002111;gene_name=ENSG00000310550;ID=intron:HG002_chrY_T0002111:2;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62141965	62142034	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=HG002_chrY_T0002111;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002111;transcript_name=HG002_chrY_T0002111;gene_name=ENSG00000310550;ID=exon:HG002_chrY_T0002111:3;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62141108	62142180	1000	-	.	source_transcript=ENST00000850725.1;source_transcript_name=ENST00000850725;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850725.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850725.1,ENST00000850725.1;transcript_id=HG002_chrY_T0002112;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_G0000801;transcript_name=HG002_chrY_T0002112;gene_name=ENSG00000310550;ID=HG002_chrY_T0002112;Name=ENSG00000310550
HG002_chrY	CAT	exon	62141108	62141320	.	-	.	source_transcript=ENST00000850725.1;source_transcript_name=ENST00000850725;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850725.1,ENST00000850725.1;transcript_id=HG002_chrY_T0002112;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002112;transcript_name=HG002_chrY_T0002112;gene_name=ENSG00000310550;ID=exon:HG002_chrY_T0002112:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62141321	62141635	.	-	.	source_transcript=ENST00000850725.1;source_transcript_name=ENST00000850725;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850725.1,ENST00000850725.1;transcript_id=HG002_chrY_T0002112;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002112;transcript_name=HG002_chrY_T0002112;gene_name=ENSG00000310550;ID=intron:HG002_chrY_T0002112:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62141636	62141725	.	-	.	source_transcript=ENST00000850725.1;source_transcript_name=ENST00000850725;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850725.1,ENST00000850725.1;transcript_id=HG002_chrY_T0002112;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002112;transcript_name=HG002_chrY_T0002112;gene_name=ENSG00000310550;ID=exon:HG002_chrY_T0002112:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62141726	62141964	.	-	.	source_transcript=ENST00000850725.1;source_transcript_name=ENST00000850725;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850725.1,ENST00000850725.1;transcript_id=HG002_chrY_T0002112;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002112;transcript_name=HG002_chrY_T0002112;gene_name=ENSG00000310550;ID=intron:HG002_chrY_T0002112:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62141965	62142180	.	-	.	source_transcript=ENST00000850725.1;source_transcript_name=ENST00000850725;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850725.1,ENST00000850725.1;transcript_id=HG002_chrY_T0002112;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002112;transcript_name=HG002_chrY_T0002112;gene_name=ENSG00000310550;ID=exon:HG002_chrY_T0002112:2;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62141118	62142065	1000	-	.	source_transcript=ENST00000850726.1;source_transcript_name=ENST00000850726;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850726.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850726.1,ENST00000850726.1;transcript_id=HG002_chrY_T0002113;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_G0000801;transcript_name=HG002_chrY_T0002113;gene_name=ENSG00000310550;ID=HG002_chrY_T0002113;Name=ENSG00000310550
HG002_chrY	CAT	exon	62141118	62141320	.	-	.	source_transcript=ENST00000850726.1;source_transcript_name=ENST00000850726;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850726.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850726.1,ENST00000850726.1;transcript_id=HG002_chrY_T0002113;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002113;transcript_name=HG002_chrY_T0002113;gene_name=ENSG00000310550;ID=exon:HG002_chrY_T0002113:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62141321	62141635	.	-	.	source_transcript=ENST00000850726.1;source_transcript_name=ENST00000850726;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850726.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850726.1,ENST00000850726.1;transcript_id=HG002_chrY_T0002113;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002113;transcript_name=HG002_chrY_T0002113;gene_name=ENSG00000310550;ID=intron:HG002_chrY_T0002113:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62141636	62142065	.	-	.	source_transcript=ENST00000850726.1;source_transcript_name=ENST00000850726;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850726.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850726.1,ENST00000850726.1;transcript_id=HG002_chrY_T0002113;gene_id=HG002_chrY_G0000801;Parent=HG002_chrY_T0002113;transcript_name=HG002_chrY_T0002113;gene_name=ENSG00000310550;ID=exon:HG002_chrY_T0002113:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	62179253	62180131	.	-	.	source_gene_common_name=TRPC6P1;source_gene=ENSG00000292368.1;gene_id=HG002_chrY_G0000802;gene_biotype=processed_pseudogene;gene_name=TRPC6P1;gene_sources=liftoff;ID=HG002_chrY_G0000802;Name=TRPC6P1
HG002_chrY	CAT	transcript	62179253	62180131	1000	-	.	source_transcript=ENST00000711267.1;source_transcript_name=TRPC6P1-202;source_gene=ENSG00000292368.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292368.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711267.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711267.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRPC6P1;transcript_id=HG002_chrY_T0002114;gene_id=HG002_chrY_G0000802;Parent=HG002_chrY_G0000802;transcript_name=HG002_chrY_T0002114;gene_name=TRPC6P1;ID=HG002_chrY_T0002114;Name=TRPC6P1
HG002_chrY	CAT	exon	62179253	62180131	.	-	.	source_transcript=ENST00000711267.1;source_transcript_name=TRPC6P1-202;source_gene=ENSG00000292368.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292368.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711267.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711267.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRPC6P1;transcript_id=HG002_chrY_T0002114;gene_id=HG002_chrY_G0000802;Parent=HG002_chrY_T0002114;transcript_name=HG002_chrY_T0002114;gene_name=TRPC6P1;ID=exon:HG002_chrY_T0002114:0;Name=TRPC6P1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	62205874	62206865	.	-	.	source_gene_common_name=AMD1P2;source_gene=ENSG00000292364.1;alternative_source_transcripts=ENST00000711258.1,ENST00000711258.1;gene_id=HG002_chrY_G0000803;gene_biotype=processed_pseudogene;gene_name=AMD1P2;gene_sources=liftoff;ID=HG002_chrY_G0000803;Name=AMD1P2
HG002_chrY	CAT	transcript	62205874	62206865	1000	-	.	source_transcript=ENST00000711258.1;source_transcript_name=AMD1P2-202;source_gene=ENSG00000292364.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292364.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711258.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711258.1;transcript_score=199.899;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMD1P2;alternative_source_transcripts=ENST00000711258.1,ENST00000711258.1;transcript_id=HG002_chrY_T0002115;gene_id=HG002_chrY_G0000803;Parent=HG002_chrY_G0000803;transcript_name=HG002_chrY_T0002115;gene_name=AMD1P2;ID=HG002_chrY_T0002115;Name=AMD1P2
HG002_chrY	CAT	exon	62205874	62206865	.	-	.	source_transcript=ENST00000711258.1;source_transcript_name=AMD1P2-202;source_gene=ENSG00000292364.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292364.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711258.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711258.1;transcript_score=199.899;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMD1P2;alternative_source_transcripts=ENST00000711258.1,ENST00000711258.1;transcript_id=HG002_chrY_T0002115;gene_id=HG002_chrY_G0000803;Parent=HG002_chrY_T0002115;transcript_name=HG002_chrY_T0002115;gene_name=AMD1P2;ID=exon:HG002_chrY_T0002115:0;Name=AMD1P2;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	62252925	62253174	.	+	.	source_gene_common_name=DPH3P2;source_gene=ENSG00000292365.1;alternative_source_transcripts=ENST00000711259.1,ENST00000711259.1;gene_id=HG002_chrY_G0000804;gene_biotype=processed_pseudogene;gene_name=DPH3P2;gene_sources=liftoff;ID=HG002_chrY_G0000804;Name=DPH3P2
HG002_chrY	CAT	transcript	62252925	62253174	1000	+	.	source_transcript=ENST00000711259.1;source_transcript_name=DPH3P2-202;source_gene=ENSG00000292365.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292365.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711259.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711259.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DPH3P2;alternative_source_transcripts=ENST00000711259.1,ENST00000711259.1;transcript_id=HG002_chrY_T0002116;gene_id=HG002_chrY_G0000804;Parent=HG002_chrY_G0000804;transcript_name=HG002_chrY_T0002116;gene_name=DPH3P2;ID=HG002_chrY_T0002116;Name=DPH3P2
HG002_chrY	CAT	exon	62252925	62253174	.	+	.	source_transcript=ENST00000711259.1;source_transcript_name=DPH3P2-202;source_gene=ENSG00000292365.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292365.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711259.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711259.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DPH3P2;alternative_source_transcripts=ENST00000711259.1,ENST00000711259.1;transcript_id=HG002_chrY_T0002116;gene_id=HG002_chrY_G0000804;Parent=HG002_chrY_T0002116;transcript_name=HG002_chrY_T0002116;gene_name=DPH3P2;ID=exon:HG002_chrY_T0002116:0;Name=DPH3P2;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	62258667	62321102	.	+	.	source_gene_common_name=VAMP7;source_gene=ENSG00000292366.1;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;gene_id=HG002_chrY_G0000805;gene_biotype=protein_coding;gene_name=VAMP7;gene_sources=liftoff;ID=HG002_chrY_G0000805;Name=VAMP7
HG002_chrY	CAT	transcript	62258667	62321102	100	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG002_chrY_T0002117;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_G0000805;transcript_name=HG002_chrY_T0002117;gene_name=VAMP7;ID=HG002_chrY_T0002117;Name=VAMP7
HG002_chrY	CAT	exon	62258667	62258770	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG002_chrY_T0002117;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002117;transcript_name=HG002_chrY_T0002117;gene_name=VAMP7;ID=exon:HG002_chrY_T0002117:0;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62258771	62266780	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG002_chrY_T0002117;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002117;transcript_name=HG002_chrY_T0002117;gene_name=VAMP7;ID=intron:HG002_chrY_T0002117:0;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62266781	62266935	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG002_chrY_T0002117;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002117;transcript_name=HG002_chrY_T0002117;gene_name=VAMP7;ID=exon:HG002_chrY_T0002117:1;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62266790	62266935	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG002_chrY_T0002117;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002117;transcript_name=HG002_chrY_T0002117;gene_name=VAMP7;ID=CDS:HG002_chrY_T0002117:0;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	62266790	62266792	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG002_chrY_T0002117;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002117;transcript_name=HG002_chrY_T0002117;gene_name=VAMP7;ID=start_codon:HG002_chrY_T0002117;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62266936	62272948	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG002_chrY_T0002117;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002117;transcript_name=HG002_chrY_T0002117;gene_name=VAMP7;ID=intron:HG002_chrY_T0002117:1;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62272949	62273006	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG002_chrY_T0002117;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002117;transcript_name=HG002_chrY_T0002117;gene_name=VAMP7;ID=exon:HG002_chrY_T0002117:2;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62272949	62273006	.	+	1	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG002_chrY_T0002117;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002117;transcript_name=HG002_chrY_T0002117;gene_name=VAMP7;ID=CDS:HG002_chrY_T0002117:1;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62273007	62275437	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG002_chrY_T0002117;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002117;transcript_name=HG002_chrY_T0002117;gene_name=VAMP7;ID=intron:HG002_chrY_T0002117:2;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62275438	62275575	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG002_chrY_T0002117;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002117;transcript_name=HG002_chrY_T0002117;gene_name=VAMP7;ID=exon:HG002_chrY_T0002117:3;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62275438	62275575	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG002_chrY_T0002117;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002117;transcript_name=HG002_chrY_T0002117;gene_name=VAMP7;ID=CDS:HG002_chrY_T0002117:2;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62275576	62277825	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG002_chrY_T0002117;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002117;transcript_name=HG002_chrY_T0002117;gene_name=VAMP7;ID=intron:HG002_chrY_T0002117:3;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62277826	62277916	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG002_chrY_T0002117;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002117;transcript_name=HG002_chrY_T0002117;gene_name=VAMP7;ID=exon:HG002_chrY_T0002117:4;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62277826	62277916	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG002_chrY_T0002117;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002117;transcript_name=HG002_chrY_T0002117;gene_name=VAMP7;ID=CDS:HG002_chrY_T0002117:3;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62277917	62297149	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG002_chrY_T0002117;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002117;transcript_name=HG002_chrY_T0002117;gene_name=VAMP7;ID=intron:HG002_chrY_T0002117:4;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62297150	62297217	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG002_chrY_T0002117;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002117;transcript_name=HG002_chrY_T0002117;gene_name=VAMP7;ID=exon:HG002_chrY_T0002117:5;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62297150	62297217	.	+	2	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG002_chrY_T0002117;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002117;transcript_name=HG002_chrY_T0002117;gene_name=VAMP7;ID=CDS:HG002_chrY_T0002117:4;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62297218	62317034	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG002_chrY_T0002117;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002117;transcript_name=HG002_chrY_T0002117;gene_name=VAMP7;ID=intron:HG002_chrY_T0002117:5;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62317035	62317127	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG002_chrY_T0002117;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002117;transcript_name=HG002_chrY_T0002117;gene_name=VAMP7;ID=exon:HG002_chrY_T0002117:6;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62317035	62317127	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG002_chrY_T0002117;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002117;transcript_name=HG002_chrY_T0002117;gene_name=VAMP7;ID=CDS:HG002_chrY_T0002117:5;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62317128	62319215	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG002_chrY_T0002117;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002117;transcript_name=HG002_chrY_T0002117;gene_name=VAMP7;ID=intron:HG002_chrY_T0002117:6;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62319216	62321102	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG002_chrY_T0002117;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002117;transcript_name=HG002_chrY_T0002117;gene_name=VAMP7;ID=exon:HG002_chrY_T0002117:7;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62319216	62319284	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG002_chrY_T0002117;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002117;transcript_name=HG002_chrY_T0002117;gene_name=VAMP7;ID=CDS:HG002_chrY_T0002117:6;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	62319282	62319284	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG002_chrY_T0002117;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002117;transcript_name=HG002_chrY_T0002117;gene_name=VAMP7;ID=stop_codon:HG002_chrY_T0002117;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62258680	62319242	1000	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=299.865;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG002_chrY_T0002118;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_G0000805;transcript_name=HG002_chrY_T0002118;gene_name=VAMP7;ID=HG002_chrY_T0002118;Name=VAMP7
HG002_chrY	CAT	exon	62258680	62258770	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG002_chrY_T0002118;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002118;transcript_name=HG002_chrY_T0002118;gene_name=VAMP7;ID=exon:HG002_chrY_T0002118:0;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62258771	62266780	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG002_chrY_T0002118;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002118;transcript_name=HG002_chrY_T0002118;gene_name=VAMP7;ID=intron:HG002_chrY_T0002118:0;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62266781	62266956	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG002_chrY_T0002118;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002118;transcript_name=HG002_chrY_T0002118;gene_name=VAMP7;ID=exon:HG002_chrY_T0002118:1;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62266957	62272948	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG002_chrY_T0002118;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002118;transcript_name=HG002_chrY_T0002118;gene_name=VAMP7;ID=intron:HG002_chrY_T0002118:1;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62272949	62273006	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG002_chrY_T0002118;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002118;transcript_name=HG002_chrY_T0002118;gene_name=VAMP7;ID=exon:HG002_chrY_T0002118:2;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62273007	62275437	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG002_chrY_T0002118;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002118;transcript_name=HG002_chrY_T0002118;gene_name=VAMP7;ID=intron:HG002_chrY_T0002118:2;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62275438	62275575	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG002_chrY_T0002118;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002118;transcript_name=HG002_chrY_T0002118;gene_name=VAMP7;ID=exon:HG002_chrY_T0002118:3;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62275576	62277825	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG002_chrY_T0002118;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002118;transcript_name=HG002_chrY_T0002118;gene_name=VAMP7;ID=intron:HG002_chrY_T0002118:3;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62277826	62277916	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG002_chrY_T0002118;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002118;transcript_name=HG002_chrY_T0002118;gene_name=VAMP7;ID=exon:HG002_chrY_T0002118:4;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62277917	62297149	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG002_chrY_T0002118;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002118;transcript_name=HG002_chrY_T0002118;gene_name=VAMP7;ID=intron:HG002_chrY_T0002118:4;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62297150	62297217	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG002_chrY_T0002118;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002118;transcript_name=HG002_chrY_T0002118;gene_name=VAMP7;ID=exon:HG002_chrY_T0002118:5;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62297218	62317034	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG002_chrY_T0002118;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002118;transcript_name=HG002_chrY_T0002118;gene_name=VAMP7;ID=intron:HG002_chrY_T0002118:5;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62317035	62317127	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG002_chrY_T0002118;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002118;transcript_name=HG002_chrY_T0002118;gene_name=VAMP7;ID=exon:HG002_chrY_T0002118:6;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62317128	62319215	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG002_chrY_T0002118;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002118;transcript_name=HG002_chrY_T0002118;gene_name=VAMP7;ID=intron:HG002_chrY_T0002118:6;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62319216	62319242	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG002_chrY_T0002118;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002118;transcript_name=HG002_chrY_T0002118;gene_name=VAMP7;ID=exon:HG002_chrY_T0002118:7;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62258682	62319277	1000	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG002_chrY_T0002119;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_G0000805;transcript_name=HG002_chrY_T0002119;gene_name=VAMP7;ID=HG002_chrY_T0002119;Name=VAMP7
HG002_chrY	CAT	exon	62258682	62258770	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG002_chrY_T0002119;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002119;transcript_name=HG002_chrY_T0002119;gene_name=VAMP7;ID=exon:HG002_chrY_T0002119:0;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62258771	62266780	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG002_chrY_T0002119;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002119;transcript_name=HG002_chrY_T0002119;gene_name=VAMP7;ID=intron:HG002_chrY_T0002119:0;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62266781	62266935	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG002_chrY_T0002119;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002119;transcript_name=HG002_chrY_T0002119;gene_name=VAMP7;ID=exon:HG002_chrY_T0002119:1;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62266790	62266935	.	+	0	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG002_chrY_T0002119;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002119;transcript_name=HG002_chrY_T0002119;gene_name=VAMP7;ID=CDS:HG002_chrY_T0002119:0;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	62266790	62266792	.	+	0	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG002_chrY_T0002119;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002119;transcript_name=HG002_chrY_T0002119;gene_name=VAMP7;ID=start_codon:HG002_chrY_T0002119;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62266936	62275437	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG002_chrY_T0002119;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002119;transcript_name=HG002_chrY_T0002119;gene_name=VAMP7;ID=intron:HG002_chrY_T0002119:1;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62275438	62275575	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG002_chrY_T0002119;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002119;transcript_name=HG002_chrY_T0002119;gene_name=VAMP7;ID=exon:HG002_chrY_T0002119:2;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62275438	62275471	.	+	1	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG002_chrY_T0002119;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002119;transcript_name=HG002_chrY_T0002119;gene_name=VAMP7;ID=CDS:HG002_chrY_T0002119:1;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	62275469	62275471	.	+	0	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG002_chrY_T0002119;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002119;transcript_name=HG002_chrY_T0002119;gene_name=VAMP7;ID=stop_codon:HG002_chrY_T0002119;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62275576	62277825	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG002_chrY_T0002119;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002119;transcript_name=HG002_chrY_T0002119;gene_name=VAMP7;ID=intron:HG002_chrY_T0002119:2;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62277826	62277916	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG002_chrY_T0002119;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002119;transcript_name=HG002_chrY_T0002119;gene_name=VAMP7;ID=exon:HG002_chrY_T0002119:3;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62277917	62297149	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG002_chrY_T0002119;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002119;transcript_name=HG002_chrY_T0002119;gene_name=VAMP7;ID=intron:HG002_chrY_T0002119:3;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62297150	62297217	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG002_chrY_T0002119;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002119;transcript_name=HG002_chrY_T0002119;gene_name=VAMP7;ID=exon:HG002_chrY_T0002119:4;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62297218	62317034	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG002_chrY_T0002119;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002119;transcript_name=HG002_chrY_T0002119;gene_name=VAMP7;ID=intron:HG002_chrY_T0002119:4;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62317035	62317127	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG002_chrY_T0002119;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002119;transcript_name=HG002_chrY_T0002119;gene_name=VAMP7;ID=exon:HG002_chrY_T0002119:5;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62317128	62319215	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG002_chrY_T0002119;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002119;transcript_name=HG002_chrY_T0002119;gene_name=VAMP7;ID=intron:HG002_chrY_T0002119:5;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62319216	62319277	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG002_chrY_T0002119;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002119;transcript_name=HG002_chrY_T0002119;gene_name=VAMP7;ID=exon:HG002_chrY_T0002119:6;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62258694	62317124	1000	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=299.851;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG002_chrY_T0002120;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_G0000805;transcript_name=HG002_chrY_T0002120;gene_name=VAMP7;ID=HG002_chrY_T0002120;Name=VAMP7
HG002_chrY	CAT	exon	62258694	62258770	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG002_chrY_T0002120;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002120;transcript_name=HG002_chrY_T0002120;gene_name=VAMP7;ID=exon:HG002_chrY_T0002120:0;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62258771	62266780	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG002_chrY_T0002120;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002120;transcript_name=HG002_chrY_T0002120;gene_name=VAMP7;ID=intron:HG002_chrY_T0002120:0;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62266781	62266931	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG002_chrY_T0002120;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002120;transcript_name=HG002_chrY_T0002120;gene_name=VAMP7;ID=exon:HG002_chrY_T0002120:1;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62266932	62272948	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG002_chrY_T0002120;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002120;transcript_name=HG002_chrY_T0002120;gene_name=VAMP7;ID=intron:HG002_chrY_T0002120:1;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62272949	62273006	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG002_chrY_T0002120;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002120;transcript_name=HG002_chrY_T0002120;gene_name=VAMP7;ID=exon:HG002_chrY_T0002120:2;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62273007	62275437	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG002_chrY_T0002120;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002120;transcript_name=HG002_chrY_T0002120;gene_name=VAMP7;ID=intron:HG002_chrY_T0002120:2;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62275438	62275575	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG002_chrY_T0002120;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002120;transcript_name=HG002_chrY_T0002120;gene_name=VAMP7;ID=exon:HG002_chrY_T0002120:3;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62275576	62277825	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG002_chrY_T0002120;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002120;transcript_name=HG002_chrY_T0002120;gene_name=VAMP7;ID=intron:HG002_chrY_T0002120:3;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62277826	62277916	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG002_chrY_T0002120;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002120;transcript_name=HG002_chrY_T0002120;gene_name=VAMP7;ID=exon:HG002_chrY_T0002120:4;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62277917	62297149	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG002_chrY_T0002120;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002120;transcript_name=HG002_chrY_T0002120;gene_name=VAMP7;ID=intron:HG002_chrY_T0002120:4;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62297150	62297217	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG002_chrY_T0002120;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002120;transcript_name=HG002_chrY_T0002120;gene_name=VAMP7;ID=exon:HG002_chrY_T0002120:5;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62297218	62317034	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG002_chrY_T0002120;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002120;transcript_name=HG002_chrY_T0002120;gene_name=VAMP7;ID=intron:HG002_chrY_T0002120:5;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62317035	62317124	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG002_chrY_T0002120;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002120;transcript_name=HG002_chrY_T0002120;gene_name=VAMP7;ID=exon:HG002_chrY_T0002120:6;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62258697	62321102	100	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG002_chrY_T0002121;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_G0000805;transcript_name=HG002_chrY_T0002121;gene_name=VAMP7;ID=HG002_chrY_T0002121;Name=VAMP7
HG002_chrY	CAT	exon	62258697	62258770	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG002_chrY_T0002121;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002121;transcript_name=HG002_chrY_T0002121;gene_name=VAMP7;ID=exon:HG002_chrY_T0002121:0;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62258771	62266780	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG002_chrY_T0002121;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002121;transcript_name=HG002_chrY_T0002121;gene_name=VAMP7;ID=intron:HG002_chrY_T0002121:0;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62266781	62266935	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG002_chrY_T0002121;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002121;transcript_name=HG002_chrY_T0002121;gene_name=VAMP7;ID=exon:HG002_chrY_T0002121:1;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62266790	62266935	.	+	0	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG002_chrY_T0002121;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002121;transcript_name=HG002_chrY_T0002121;gene_name=VAMP7;ID=CDS:HG002_chrY_T0002121:0;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	62266790	62266792	.	+	0	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG002_chrY_T0002121;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002121;transcript_name=HG002_chrY_T0002121;gene_name=VAMP7;ID=start_codon:HG002_chrY_T0002121;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62266936	62272948	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG002_chrY_T0002121;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002121;transcript_name=HG002_chrY_T0002121;gene_name=VAMP7;ID=intron:HG002_chrY_T0002121:1;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62272949	62273006	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG002_chrY_T0002121;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002121;transcript_name=HG002_chrY_T0002121;gene_name=VAMP7;ID=exon:HG002_chrY_T0002121:2;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62272949	62273006	.	+	1	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG002_chrY_T0002121;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002121;transcript_name=HG002_chrY_T0002121;gene_name=VAMP7;ID=CDS:HG002_chrY_T0002121:1;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62273007	62275437	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG002_chrY_T0002121;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002121;transcript_name=HG002_chrY_T0002121;gene_name=VAMP7;ID=intron:HG002_chrY_T0002121:2;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62275438	62275575	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG002_chrY_T0002121;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002121;transcript_name=HG002_chrY_T0002121;gene_name=VAMP7;ID=exon:HG002_chrY_T0002121:3;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62275438	62275575	.	+	0	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG002_chrY_T0002121;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002121;transcript_name=HG002_chrY_T0002121;gene_name=VAMP7;ID=CDS:HG002_chrY_T0002121:2;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62275576	62277825	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG002_chrY_T0002121;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002121;transcript_name=HG002_chrY_T0002121;gene_name=VAMP7;ID=intron:HG002_chrY_T0002121:3;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62277826	62277916	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG002_chrY_T0002121;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002121;transcript_name=HG002_chrY_T0002121;gene_name=VAMP7;ID=exon:HG002_chrY_T0002121:4;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62277826	62277916	.	+	0	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG002_chrY_T0002121;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002121;transcript_name=HG002_chrY_T0002121;gene_name=VAMP7;ID=CDS:HG002_chrY_T0002121:3;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62277917	62317034	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG002_chrY_T0002121;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002121;transcript_name=HG002_chrY_T0002121;gene_name=VAMP7;ID=intron:HG002_chrY_T0002121:4;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62317035	62317127	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG002_chrY_T0002121;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002121;transcript_name=HG002_chrY_T0002121;gene_name=VAMP7;ID=exon:HG002_chrY_T0002121:5;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62317035	62317127	.	+	2	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG002_chrY_T0002121;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002121;transcript_name=HG002_chrY_T0002121;gene_name=VAMP7;ID=CDS:HG002_chrY_T0002121:4;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62317128	62319215	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG002_chrY_T0002121;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002121;transcript_name=HG002_chrY_T0002121;gene_name=VAMP7;ID=intron:HG002_chrY_T0002121:5;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62319216	62321102	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG002_chrY_T0002121;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002121;transcript_name=HG002_chrY_T0002121;gene_name=VAMP7;ID=exon:HG002_chrY_T0002121:6;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62319216	62319472	.	+	2	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG002_chrY_T0002121;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002121;transcript_name=HG002_chrY_T0002121;gene_name=VAMP7;ID=CDS:HG002_chrY_T0002121:5;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	62319470	62319472	.	+	0	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG002_chrY_T0002121;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002121;transcript_name=HG002_chrY_T0002121;gene_name=VAMP7;ID=stop_codon:HG002_chrY_T0002121;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62258700	62319322	100	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG002_chrY_T0002122;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_G0000805;transcript_name=HG002_chrY_T0002122;gene_name=VAMP7;ID=HG002_chrY_T0002122;Name=VAMP7
HG002_chrY	CAT	exon	62258700	62258770	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG002_chrY_T0002122;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002122;transcript_name=HG002_chrY_T0002122;gene_name=VAMP7;ID=exon:HG002_chrY_T0002122:0;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62258771	62266780	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG002_chrY_T0002122;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002122;transcript_name=HG002_chrY_T0002122;gene_name=VAMP7;ID=intron:HG002_chrY_T0002122:0;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62266781	62266870	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG002_chrY_T0002122;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002122;transcript_name=HG002_chrY_T0002122;gene_name=VAMP7;ID=exon:HG002_chrY_T0002122:1;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62266790	62266870	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG002_chrY_T0002122;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002122;transcript_name=HG002_chrY_T0002122;gene_name=VAMP7;ID=CDS:HG002_chrY_T0002122:0;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	62266790	62266792	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG002_chrY_T0002122;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002122;transcript_name=HG002_chrY_T0002122;gene_name=VAMP7;ID=start_codon:HG002_chrY_T0002122;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62266871	62275437	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG002_chrY_T0002122;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002122;transcript_name=HG002_chrY_T0002122;gene_name=VAMP7;ID=intron:HG002_chrY_T0002122:1;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62275438	62275575	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG002_chrY_T0002122;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002122;transcript_name=HG002_chrY_T0002122;gene_name=VAMP7;ID=exon:HG002_chrY_T0002122:2;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62275438	62275575	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG002_chrY_T0002122;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002122;transcript_name=HG002_chrY_T0002122;gene_name=VAMP7;ID=CDS:HG002_chrY_T0002122:1;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62275576	62277825	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG002_chrY_T0002122;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002122;transcript_name=HG002_chrY_T0002122;gene_name=VAMP7;ID=intron:HG002_chrY_T0002122:2;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62277826	62277916	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG002_chrY_T0002122;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002122;transcript_name=HG002_chrY_T0002122;gene_name=VAMP7;ID=exon:HG002_chrY_T0002122:3;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62277826	62277916	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG002_chrY_T0002122;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002122;transcript_name=HG002_chrY_T0002122;gene_name=VAMP7;ID=CDS:HG002_chrY_T0002122:2;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62277917	62297149	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG002_chrY_T0002122;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002122;transcript_name=HG002_chrY_T0002122;gene_name=VAMP7;ID=intron:HG002_chrY_T0002122:3;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62297150	62297217	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG002_chrY_T0002122;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002122;transcript_name=HG002_chrY_T0002122;gene_name=VAMP7;ID=exon:HG002_chrY_T0002122:4;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62297150	62297217	.	+	2	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG002_chrY_T0002122;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002122;transcript_name=HG002_chrY_T0002122;gene_name=VAMP7;ID=CDS:HG002_chrY_T0002122:3;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62297218	62317034	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG002_chrY_T0002122;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002122;transcript_name=HG002_chrY_T0002122;gene_name=VAMP7;ID=intron:HG002_chrY_T0002122:4;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62317035	62317127	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG002_chrY_T0002122;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002122;transcript_name=HG002_chrY_T0002122;gene_name=VAMP7;ID=exon:HG002_chrY_T0002122:5;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62317035	62317127	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG002_chrY_T0002122;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002122;transcript_name=HG002_chrY_T0002122;gene_name=VAMP7;ID=CDS:HG002_chrY_T0002122:4;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62317128	62319215	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG002_chrY_T0002122;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002122;transcript_name=HG002_chrY_T0002122;gene_name=VAMP7;ID=intron:HG002_chrY_T0002122:5;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62319216	62319322	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG002_chrY_T0002122;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002122;transcript_name=HG002_chrY_T0002122;gene_name=VAMP7;ID=exon:HG002_chrY_T0002122:6;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62319216	62319284	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG002_chrY_T0002122;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002122;transcript_name=HG002_chrY_T0002122;gene_name=VAMP7;ID=CDS:HG002_chrY_T0002122:5;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	62319282	62319284	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG002_chrY_T0002122;gene_id=HG002_chrY_G0000805;Parent=HG002_chrY_T0002122;transcript_name=HG002_chrY_T0002122;gene_name=VAMP7;ID=stop_codon:HG002_chrY_T0002122;Name=VAMP7;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	62329451	62336658	.	-	.	source_gene_common_name=ENSG00000310555;source_gene=ENSG00000310555.1;alternative_source_transcripts=ENST00000850734.1,ENST00000850734.1;gene_id=HG002_chrY_G0000806;gene_biotype=lncRNA;gene_name=ENSG00000310555;gene_sources=liftoff;ID=HG002_chrY_G0000806;Name=ENSG00000310555
HG002_chrY	CAT	transcript	62329451	62336658	1000	-	.	source_transcript=ENST00000850734.1;source_transcript_name=ENST00000850734;source_gene=ENSG00000310555.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310555.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850734.1;transcript_score=299.119;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310555;alternative_source_transcripts=ENST00000850734.1,ENST00000850734.1;transcript_id=HG002_chrY_T0002123;gene_id=HG002_chrY_G0000806;Parent=HG002_chrY_G0000806;transcript_name=HG002_chrY_T0002123;gene_name=ENSG00000310555;ID=HG002_chrY_T0002123;Name=ENSG00000310555
HG002_chrY	CAT	exon	62329451	62329733	.	-	.	source_transcript=ENST00000850734.1;source_transcript_name=ENST00000850734;source_gene=ENSG00000310555.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310555.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850734.1;transcript_score=299.119;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310555;alternative_source_transcripts=ENST00000850734.1,ENST00000850734.1;transcript_id=HG002_chrY_T0002123;gene_id=HG002_chrY_G0000806;Parent=HG002_chrY_T0002123;transcript_name=HG002_chrY_T0002123;gene_name=ENSG00000310555;ID=exon:HG002_chrY_T0002123:0;Name=ENSG00000310555;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62329734	62336487	.	-	.	source_transcript=ENST00000850734.1;source_transcript_name=ENST00000850734;source_gene=ENSG00000310555.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310555.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850734.1;transcript_score=299.119;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310555;alternative_source_transcripts=ENST00000850734.1,ENST00000850734.1;transcript_id=HG002_chrY_T0002123;gene_id=HG002_chrY_G0000806;Parent=HG002_chrY_T0002123;transcript_name=HG002_chrY_T0002123;gene_name=ENSG00000310555;ID=intron:HG002_chrY_T0002123:0;Name=ENSG00000310555;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62336488	62336658	.	-	.	source_transcript=ENST00000850734.1;source_transcript_name=ENST00000850734;source_gene=ENSG00000310555.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310555.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850734.1;transcript_score=299.119;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310555;alternative_source_transcripts=ENST00000850734.1,ENST00000850734.1;transcript_id=HG002_chrY_T0002123;gene_id=HG002_chrY_G0000806;Parent=HG002_chrY_T0002123;transcript_name=HG002_chrY_T0002123;gene_name=ENSG00000310555;ID=exon:HG002_chrY_T0002123:1;Name=ENSG00000310555;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	62356326	62356659	.	-	.	source_gene_common_name=ELOCP24;source_gene=ENSG00000292367.1;alternative_source_transcripts=ENST00000711266.1,ENST00000711266.1;gene_id=HG002_chrY_G0000807;gene_biotype=processed_pseudogene;gene_name=ELOCP24;gene_sources=liftoff;ID=HG002_chrY_G0000807;Name=ELOCP24
HG002_chrY	CAT	transcript	62356326	62356659	1000	-	.	source_transcript=ENST00000711266.1;source_transcript_name=ELOCP24-202;source_gene=ENSG00000292367.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292367.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711266.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711266.1;transcript_score=199.701;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP24;alternative_source_transcripts=ENST00000711266.1,ENST00000711266.1;transcript_id=HG002_chrY_T0002124;gene_id=HG002_chrY_G0000807;Parent=HG002_chrY_G0000807;transcript_name=HG002_chrY_T0002124;gene_name=ELOCP24;ID=HG002_chrY_T0002124;Name=ELOCP24
HG002_chrY	CAT	exon	62356326	62356659	.	-	.	source_transcript=ENST00000711266.1;source_transcript_name=ELOCP24-202;source_gene=ENSG00000292367.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292367.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711266.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711266.1;transcript_score=199.701;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP24;alternative_source_transcripts=ENST00000711266.1,ENST00000711266.1;transcript_id=HG002_chrY_T0002124;gene_id=HG002_chrY_G0000807;Parent=HG002_chrY_T0002124;transcript_name=HG002_chrY_T0002124;gene_name=ELOCP24;ID=exon:HG002_chrY_T0002124:0;Name=ELOCP24;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	62362703	62363581	.	-	.	source_gene_common_name=TRPC6P1;source_gene=ENSG00000292368.1;alternative_source_transcripts=ENST00000711267.1,ENST00000711267.1;gene_id=HG002_chrY_G0000808;gene_biotype=processed_pseudogene;gene_name=TRPC6P1;gene_sources=liftoff;ID=HG002_chrY_G0000808;Name=TRPC6P1
HG002_chrY	CAT	transcript	62362703	62363581	1000	-	.	source_transcript=ENST00000711267.1;source_transcript_name=TRPC6P1-202;source_gene=ENSG00000292368.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292368.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711267.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711267.1;transcript_score=199.772;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRPC6P1;alternative_source_transcripts=ENST00000711267.1,ENST00000711267.1;transcript_id=HG002_chrY_T0002125;gene_id=HG002_chrY_G0000808;Parent=HG002_chrY_G0000808;transcript_name=HG002_chrY_T0002125;gene_name=TRPC6P1;ID=HG002_chrY_T0002125;Name=TRPC6P1
HG002_chrY	CAT	exon	62362703	62363581	.	-	.	source_transcript=ENST00000711267.1;source_transcript_name=TRPC6P1-202;source_gene=ENSG00000292368.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292368.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711267.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711267.1;transcript_score=199.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRPC6P1;alternative_source_transcripts=ENST00000711267.1,ENST00000711267.1;transcript_id=HG002_chrY_T0002125;gene_id=HG002_chrY_G0000808;Parent=HG002_chrY_T0002125;transcript_name=HG002_chrY_T0002125;gene_name=TRPC6P1;ID=exon:HG002_chrY_T0002125:0;Name=TRPC6P1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	62375028	62390346	.	+	.	source_gene_common_name=IL9R;source_gene=ENSG00000292373.2;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;gene_id=HG002_chrY_G0000809;gene_biotype=protein_coding;gene_name=IL9R;gene_sources=liftoff;ID=HG002_chrY_G0000809;Name=IL9R
HG002_chrY	CAT	transcript	62375028	62388146	100	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG002_chrY_T0002126;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_G0000809;transcript_name=HG002_chrY_T0002126;gene_name=IL9R;ID=HG002_chrY_T0002126;Name=IL9R
HG002_chrY	CAT	exon	62375028	62375119	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG002_chrY_T0002126;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002126;transcript_name=HG002_chrY_T0002126;gene_name=IL9R;ID=exon:HG002_chrY_T0002126:0;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62375092	62375119	.	+	0	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG002_chrY_T0002126;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002126;transcript_name=HG002_chrY_T0002126;gene_name=IL9R;ID=CDS:HG002_chrY_T0002126:0;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	62375092	62375094	.	+	0	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG002_chrY_T0002126;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002126;transcript_name=HG002_chrY_T0002126;gene_name=IL9R;ID=start_codon:HG002_chrY_T0002126;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62375120	62380241	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG002_chrY_T0002126;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002126;transcript_name=HG002_chrY_T0002126;gene_name=IL9R;ID=intron:HG002_chrY_T0002126:0;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62380242	62380355	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG002_chrY_T0002126;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002126;transcript_name=HG002_chrY_T0002126;gene_name=IL9R;ID=exon:HG002_chrY_T0002126:1;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62380242	62380355	.	+	2	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG002_chrY_T0002126;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002126;transcript_name=HG002_chrY_T0002126;gene_name=IL9R;ID=CDS:HG002_chrY_T0002126:1;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62380356	62380784	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG002_chrY_T0002126;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002126;transcript_name=HG002_chrY_T0002126;gene_name=IL9R;ID=intron:HG002_chrY_T0002126:1;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62380785	62380896	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG002_chrY_T0002126;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002126;transcript_name=HG002_chrY_T0002126;gene_name=IL9R;ID=exon:HG002_chrY_T0002126:2;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62380785	62380896	.	+	2	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG002_chrY_T0002126;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002126;transcript_name=HG002_chrY_T0002126;gene_name=IL9R;ID=CDS:HG002_chrY_T0002126:2;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62380897	62381012	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG002_chrY_T0002126;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002126;transcript_name=HG002_chrY_T0002126;gene_name=IL9R;ID=intron:HG002_chrY_T0002126:2;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62381013	62381191	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG002_chrY_T0002126;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002126;transcript_name=HG002_chrY_T0002126;gene_name=IL9R;ID=exon:HG002_chrY_T0002126:3;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62381013	62381191	.	+	1	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG002_chrY_T0002126;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002126;transcript_name=HG002_chrY_T0002126;gene_name=IL9R;ID=CDS:HG002_chrY_T0002126:3;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62381192	62381755	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG002_chrY_T0002126;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002126;transcript_name=HG002_chrY_T0002126;gene_name=IL9R;ID=intron:HG002_chrY_T0002126:3;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62381756	62381901	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG002_chrY_T0002126;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002126;transcript_name=HG002_chrY_T0002126;gene_name=IL9R;ID=exon:HG002_chrY_T0002126:4;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62381756	62381901	.	+	2	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG002_chrY_T0002126;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002126;transcript_name=HG002_chrY_T0002126;gene_name=IL9R;ID=CDS:HG002_chrY_T0002126:4;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62381902	62382613	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG002_chrY_T0002126;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002126;transcript_name=HG002_chrY_T0002126;gene_name=IL9R;ID=intron:HG002_chrY_T0002126:4;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62382614	62382815	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG002_chrY_T0002126;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002126;transcript_name=HG002_chrY_T0002126;gene_name=IL9R;ID=exon:HG002_chrY_T0002126:5;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62382614	62382815	.	+	0	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG002_chrY_T0002126;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002126;transcript_name=HG002_chrY_T0002126;gene_name=IL9R;ID=CDS:HG002_chrY_T0002126:5;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62382816	62383418	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG002_chrY_T0002126;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002126;transcript_name=HG002_chrY_T0002126;gene_name=IL9R;ID=intron:HG002_chrY_T0002126:5;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62383419	62383524	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG002_chrY_T0002126;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002126;transcript_name=HG002_chrY_T0002126;gene_name=IL9R;ID=exon:HG002_chrY_T0002126:6;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62383419	62383524	.	+	2	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG002_chrY_T0002126;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002126;transcript_name=HG002_chrY_T0002126;gene_name=IL9R;ID=CDS:HG002_chrY_T0002126:6;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62383525	62384859	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG002_chrY_T0002126;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002126;transcript_name=HG002_chrY_T0002126;gene_name=IL9R;ID=intron:HG002_chrY_T0002126:6;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62384860	62384944	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG002_chrY_T0002126;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002126;transcript_name=HG002_chrY_T0002126;gene_name=IL9R;ID=exon:HG002_chrY_T0002126:7;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62384860	62384944	.	+	1	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG002_chrY_T0002126;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002126;transcript_name=HG002_chrY_T0002126;gene_name=IL9R;ID=CDS:HG002_chrY_T0002126:7;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62384945	62387144	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG002_chrY_T0002126;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002126;transcript_name=HG002_chrY_T0002126;gene_name=IL9R;ID=intron:HG002_chrY_T0002126:7;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62387145	62388146	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG002_chrY_T0002126;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002126;transcript_name=HG002_chrY_T0002126;gene_name=IL9R;ID=exon:HG002_chrY_T0002126:8;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62387145	62387738	.	+	0	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG002_chrY_T0002126;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002126;transcript_name=HG002_chrY_T0002126;gene_name=IL9R;ID=CDS:HG002_chrY_T0002126:8;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	62387736	62387738	.	+	0	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG002_chrY_T0002126;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002126;transcript_name=HG002_chrY_T0002126;gene_name=IL9R;ID=stop_codon:HG002_chrY_T0002126;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62375038	62390346	100	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG002_chrY_T0002127;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_G0000809;transcript_name=HG002_chrY_T0002127;gene_name=IL9R;ID=HG002_chrY_T0002127;Name=IL9R
HG002_chrY	CAT	exon	62375038	62375119	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG002_chrY_T0002127;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002127;transcript_name=HG002_chrY_T0002127;gene_name=IL9R;ID=exon:HG002_chrY_T0002127:0;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62375076	62375119	.	+	0	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG002_chrY_T0002127;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002127;transcript_name=HG002_chrY_T0002127;gene_name=IL9R;ID=CDS:HG002_chrY_T0002127:0;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	62375076	62375078	.	+	0	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG002_chrY_T0002127;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002127;transcript_name=HG002_chrY_T0002127;gene_name=IL9R;ID=start_codon:HG002_chrY_T0002127;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62375120	62378739	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG002_chrY_T0002127;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002127;transcript_name=HG002_chrY_T0002127;gene_name=IL9R;ID=intron:HG002_chrY_T0002127:0;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62378740	62378840	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG002_chrY_T0002127;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002127;transcript_name=HG002_chrY_T0002127;gene_name=IL9R;ID=exon:HG002_chrY_T0002127:1;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62378740	62378840	.	+	1	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG002_chrY_T0002127;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002127;transcript_name=HG002_chrY_T0002127;gene_name=IL9R;ID=CDS:HG002_chrY_T0002127:1;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62378841	62380217	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG002_chrY_T0002127;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002127;transcript_name=HG002_chrY_T0002127;gene_name=IL9R;ID=intron:HG002_chrY_T0002127:1;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62380218	62380355	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG002_chrY_T0002127;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002127;transcript_name=HG002_chrY_T0002127;gene_name=IL9R;ID=exon:HG002_chrY_T0002127:2;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62380218	62380355	.	+	2	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG002_chrY_T0002127;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002127;transcript_name=HG002_chrY_T0002127;gene_name=IL9R;ID=CDS:HG002_chrY_T0002127:2;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62380356	62380784	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG002_chrY_T0002127;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002127;transcript_name=HG002_chrY_T0002127;gene_name=IL9R;ID=intron:HG002_chrY_T0002127:2;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62380785	62380896	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG002_chrY_T0002127;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002127;transcript_name=HG002_chrY_T0002127;gene_name=IL9R;ID=exon:HG002_chrY_T0002127:3;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62380785	62380896	.	+	2	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG002_chrY_T0002127;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002127;transcript_name=HG002_chrY_T0002127;gene_name=IL9R;ID=CDS:HG002_chrY_T0002127:3;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62380897	62381019	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG002_chrY_T0002127;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002127;transcript_name=HG002_chrY_T0002127;gene_name=IL9R;ID=intron:HG002_chrY_T0002127:3;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62381020	62381191	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG002_chrY_T0002127;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002127;transcript_name=HG002_chrY_T0002127;gene_name=IL9R;ID=exon:HG002_chrY_T0002127:4;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62381020	62381191	.	+	1	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG002_chrY_T0002127;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002127;transcript_name=HG002_chrY_T0002127;gene_name=IL9R;ID=CDS:HG002_chrY_T0002127:4;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62381192	62381784	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG002_chrY_T0002127;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002127;transcript_name=HG002_chrY_T0002127;gene_name=IL9R;ID=intron:HG002_chrY_T0002127:4;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62381785	62381901	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG002_chrY_T0002127;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002127;transcript_name=HG002_chrY_T0002127;gene_name=IL9R;ID=exon:HG002_chrY_T0002127:5;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62381785	62381901	.	+	0	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG002_chrY_T0002127;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002127;transcript_name=HG002_chrY_T0002127;gene_name=IL9R;ID=CDS:HG002_chrY_T0002127:5;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62381902	62382613	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG002_chrY_T0002127;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002127;transcript_name=HG002_chrY_T0002127;gene_name=IL9R;ID=intron:HG002_chrY_T0002127:5;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62382614	62382815	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG002_chrY_T0002127;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002127;transcript_name=HG002_chrY_T0002127;gene_name=IL9R;ID=exon:HG002_chrY_T0002127:6;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62382614	62382815	.	+	0	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG002_chrY_T0002127;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002127;transcript_name=HG002_chrY_T0002127;gene_name=IL9R;ID=CDS:HG002_chrY_T0002127:6;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62382816	62383418	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG002_chrY_T0002127;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002127;transcript_name=HG002_chrY_T0002127;gene_name=IL9R;ID=intron:HG002_chrY_T0002127:6;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62383419	62383524	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG002_chrY_T0002127;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002127;transcript_name=HG002_chrY_T0002127;gene_name=IL9R;ID=exon:HG002_chrY_T0002127:7;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62383419	62383524	.	+	2	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG002_chrY_T0002127;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002127;transcript_name=HG002_chrY_T0002127;gene_name=IL9R;ID=CDS:HG002_chrY_T0002127:7;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62383525	62387144	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG002_chrY_T0002127;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002127;transcript_name=HG002_chrY_T0002127;gene_name=IL9R;ID=intron:HG002_chrY_T0002127:7;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62387145	62390346	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG002_chrY_T0002127;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002127;transcript_name=HG002_chrY_T0002127;gene_name=IL9R;ID=exon:HG002_chrY_T0002127:8;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62387145	62387181	.	+	1	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG002_chrY_T0002127;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002127;transcript_name=HG002_chrY_T0002127;gene_name=IL9R;ID=CDS:HG002_chrY_T0002127:8;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	62387179	62387181	.	+	0	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG002_chrY_T0002127;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002127;transcript_name=HG002_chrY_T0002127;gene_name=IL9R;ID=stop_codon:HG002_chrY_T0002127;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62375066	62380306	1000	+	.	source_transcript=ENST00000711288.1;source_transcript_name=IL9R-206;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711288.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711288.1,ENST00000711288.1;transcript_id=HG002_chrY_T0002128;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_G0000809;transcript_name=HG002_chrY_T0002128;gene_name=IL9R;ID=HG002_chrY_T0002128;Name=IL9R
HG002_chrY	CAT	exon	62375066	62375119	.	+	.	source_transcript=ENST00000711288.1;source_transcript_name=IL9R-206;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711288.1,ENST00000711288.1;transcript_id=HG002_chrY_T0002128;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002128;transcript_name=HG002_chrY_T0002128;gene_name=IL9R;ID=exon:HG002_chrY_T0002128:0;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62375120	62378661	.	+	.	source_transcript=ENST00000711288.1;source_transcript_name=IL9R-206;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711288.1,ENST00000711288.1;transcript_id=HG002_chrY_T0002128;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002128;transcript_name=HG002_chrY_T0002128;gene_name=IL9R;ID=intron:HG002_chrY_T0002128:0;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62378662	62378840	.	+	.	source_transcript=ENST00000711288.1;source_transcript_name=IL9R-206;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711288.1,ENST00000711288.1;transcript_id=HG002_chrY_T0002128;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002128;transcript_name=HG002_chrY_T0002128;gene_name=IL9R;ID=exon:HG002_chrY_T0002128:1;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62378841	62380241	.	+	.	source_transcript=ENST00000711288.1;source_transcript_name=IL9R-206;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711288.1,ENST00000711288.1;transcript_id=HG002_chrY_T0002128;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002128;transcript_name=HG002_chrY_T0002128;gene_name=IL9R;ID=intron:HG002_chrY_T0002128:1;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62380242	62380306	.	+	.	source_transcript=ENST00000711288.1;source_transcript_name=IL9R-206;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711288.1,ENST00000711288.1;transcript_id=HG002_chrY_T0002128;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002128;transcript_name=HG002_chrY_T0002128;gene_name=IL9R;ID=exon:HG002_chrY_T0002128:2;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62383450	62385382	1000	+	.	source_transcript=ENST00000711289.1;source_transcript_name=IL9R-207;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711289.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711289.1,ENST00000711289.1;transcript_id=HG002_chrY_T0002130;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_G0000809;transcript_name=HG002_chrY_T0002130;gene_name=IL9R;ID=HG002_chrY_T0002130;Name=IL9R
HG002_chrY	CAT	exon	62383450	62383524	.	+	.	source_transcript=ENST00000711289.1;source_transcript_name=IL9R-207;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711289.1,ENST00000711289.1;transcript_id=HG002_chrY_T0002130;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002130;transcript_name=HG002_chrY_T0002130;gene_name=IL9R;ID=exon:HG002_chrY_T0002130:0;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62383525	62384859	.	+	.	source_transcript=ENST00000711289.1;source_transcript_name=IL9R-207;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711289.1,ENST00000711289.1;transcript_id=HG002_chrY_T0002130;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002130;transcript_name=HG002_chrY_T0002130;gene_name=IL9R;ID=intron:HG002_chrY_T0002130:0;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62384860	62384944	.	+	.	source_transcript=ENST00000711289.1;source_transcript_name=IL9R-207;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711289.1,ENST00000711289.1;transcript_id=HG002_chrY_T0002130;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002130;transcript_name=HG002_chrY_T0002130;gene_name=IL9R;ID=exon:HG002_chrY_T0002130:1;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62384945	62385234	.	+	.	source_transcript=ENST00000711289.1;source_transcript_name=IL9R-207;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711289.1,ENST00000711289.1;transcript_id=HG002_chrY_T0002130;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002130;transcript_name=HG002_chrY_T0002130;gene_name=IL9R;ID=intron:HG002_chrY_T0002130:1;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62385235	62385382	.	+	.	source_transcript=ENST00000711289.1;source_transcript_name=IL9R-207;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711289.1,ENST00000711289.1;transcript_id=HG002_chrY_T0002130;gene_id=HG002_chrY_G0000809;Parent=HG002_chrY_T0002130;transcript_name=HG002_chrY_T0002130;gene_name=IL9R;ID=exon:HG002_chrY_T0002130:2;Name=IL9R;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	62381554	62384944	.	+	.	source_gene_common_name=ENSG00000292369;source_gene=ENSG00000292369.1;alternative_source_transcripts=ENST00000711268.1,ENST00000711268.1;gene_id=HG002_chrY_G0000810;gene_biotype=lncRNA;gene_name=ENSG00000292369;gene_sources=liftoff;ID=HG002_chrY_G0000810;Name=ENSG00000292369
HG002_chrY	CAT	transcript	62381554	62384944	1000	+	.	source_transcript=ENST00000711268.1;source_transcript_name=ENST00000711268;source_gene=ENSG00000292369.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292369.1;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711268.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711268.1;transcript_score=256.01599999999996;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292369;alternative_source_transcripts=ENST00000711268.1,ENST00000711268.1;transcript_id=HG002_chrY_T0002129;gene_id=HG002_chrY_G0000810;Parent=HG002_chrY_G0000810;transcript_name=HG002_chrY_T0002129;gene_name=ENSG00000292369;ID=HG002_chrY_T0002129;Name=ENSG00000292369
HG002_chrY	CAT	exon	62381554	62381901	.	+	.	source_transcript=ENST00000711268.1;source_transcript_name=ENST00000711268;source_gene=ENSG00000292369.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292369.1;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711268.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711268.1;transcript_score=256.01599999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292369;alternative_source_transcripts=ENST00000711268.1,ENST00000711268.1;transcript_id=HG002_chrY_T0002129;gene_id=HG002_chrY_G0000810;Parent=HG002_chrY_T0002129;transcript_name=HG002_chrY_T0002129;gene_name=ENSG00000292369;ID=exon:HG002_chrY_T0002129:0;Name=ENSG00000292369;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62381902	62384859	.	+	.	source_transcript=ENST00000711268.1;source_transcript_name=ENST00000711268;source_gene=ENSG00000292369.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292369.1;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711268.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711268.1;transcript_score=256.01599999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292369;alternative_source_transcripts=ENST00000711268.1,ENST00000711268.1;transcript_id=HG002_chrY_T0002129;gene_id=HG002_chrY_G0000810;Parent=HG002_chrY_T0002129;transcript_name=HG002_chrY_T0002129;gene_name=ENSG00000292369;ID=intron:HG002_chrY_T0002129:0;Name=ENSG00000292369;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62384860	62384944	.	+	.	source_transcript=ENST00000711268.1;source_transcript_name=ENST00000711268;source_gene=ENSG00000292369.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292369.1;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711268.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711268.1;transcript_score=256.01599999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292369;alternative_source_transcripts=ENST00000711268.1,ENST00000711268.1;transcript_id=HG002_chrY_T0002129;gene_id=HG002_chrY_G0000810;Parent=HG002_chrY_T0002129;transcript_name=HG002_chrY_T0002129;gene_name=ENSG00000292369;ID=exon:HG002_chrY_T0002129:1;Name=ENSG00000292369;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	62391945	62394217	.	-	.	source_gene_common_name=WASIR1;source_gene=ENSG00000292370.2;alternative_source_transcripts=ENST00000850720.1,ENST00000850720.1;gene_id=HG002_chrY_G0000811;gene_biotype=lncRNA;gene_name=WASIR1;gene_sources=liftoff;ID=HG002_chrY_G0000811;Name=WASIR1
HG002_chrY	CAT	transcript	62391945	62394210	1000	-	.	source_transcript=ENST00000850720.1;source_transcript_name=WASIR1-203;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850720.1;transcript_score=299.756;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850720.1,ENST00000850720.1;transcript_id=HG002_chrY_T0002131;gene_id=HG002_chrY_G0000811;Parent=HG002_chrY_G0000811;transcript_name=HG002_chrY_T0002131;gene_name=WASIR1;ID=HG002_chrY_T0002131;Name=WASIR1
HG002_chrY	CAT	exon	62391945	62392955	.	-	.	source_transcript=ENST00000850720.1;source_transcript_name=WASIR1-203;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850720.1;transcript_score=299.756;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850720.1,ENST00000850720.1;transcript_id=HG002_chrY_T0002131;gene_id=HG002_chrY_G0000811;Parent=HG002_chrY_T0002131;transcript_name=HG002_chrY_T0002131;gene_name=WASIR1;ID=exon:HG002_chrY_T0002131:0;Name=WASIR1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62392956	62393993	.	-	.	source_transcript=ENST00000850720.1;source_transcript_name=WASIR1-203;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850720.1;transcript_score=299.756;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850720.1,ENST00000850720.1;transcript_id=HG002_chrY_T0002131;gene_id=HG002_chrY_G0000811;Parent=HG002_chrY_T0002131;transcript_name=HG002_chrY_T0002131;gene_name=WASIR1;ID=intron:HG002_chrY_T0002131:0;Name=WASIR1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62393994	62394210	.	-	.	source_transcript=ENST00000850720.1;source_transcript_name=WASIR1-203;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850720.1;transcript_score=299.756;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850720.1,ENST00000850720.1;transcript_id=HG002_chrY_T0002131;gene_id=HG002_chrY_G0000811;Parent=HG002_chrY_T0002131;transcript_name=HG002_chrY_T0002131;gene_name=WASIR1;ID=exon:HG002_chrY_T0002131:1;Name=WASIR1;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62391945	62394217	1000	-	.	source_transcript=ENST00000850824.1;source_transcript_name=WASIR1-204;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850824.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850824.1;transcript_score=299.73;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850824.1,ENST00000850824.1;transcript_id=HG002_chrY_T0002132;gene_id=HG002_chrY_G0000811;Parent=HG002_chrY_G0000811;transcript_name=HG002_chrY_T0002132;gene_name=WASIR1;ID=HG002_chrY_T0002132;Name=WASIR1
HG002_chrY	CAT	exon	62391945	62392830	.	-	.	source_transcript=ENST00000850824.1;source_transcript_name=WASIR1-204;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850824.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850824.1;transcript_score=299.73;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850824.1,ENST00000850824.1;transcript_id=HG002_chrY_T0002132;gene_id=HG002_chrY_G0000811;Parent=HG002_chrY_T0002132;transcript_name=HG002_chrY_T0002132;gene_name=WASIR1;ID=exon:HG002_chrY_T0002132:0;Name=WASIR1;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62392831	62393993	.	-	.	source_transcript=ENST00000850824.1;source_transcript_name=WASIR1-204;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850824.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850824.1;transcript_score=299.73;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850824.1,ENST00000850824.1;transcript_id=HG002_chrY_T0002132;gene_id=HG002_chrY_G0000811;Parent=HG002_chrY_T0002132;transcript_name=HG002_chrY_T0002132;gene_name=WASIR1;ID=intron:HG002_chrY_T0002132:0;Name=WASIR1;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62393994	62394217	.	-	.	source_transcript=ENST00000850824.1;source_transcript_name=WASIR1-204;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850824.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850824.1;transcript_score=299.73;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850824.1,ENST00000850824.1;transcript_id=HG002_chrY_T0002132;gene_id=HG002_chrY_G0000811;Parent=HG002_chrY_T0002132;transcript_name=HG002_chrY_T0002132;gene_name=WASIR1;ID=exon:HG002_chrY_T0002132:1;Name=WASIR1;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	62398142	62401776	.	+	.	source_gene_common_name=WASH6P;source_gene=ENSG00000292372.1;alternative_source_transcripts=ENST00000711271.1,ENST00000711271.1;gene_id=HG002_chrY_G0000812;gene_biotype=protein_coding;gene_name=WASH6P;gene_sources=liftoff;ID=HG002_chrY_G0000812;Name=WASH6P
HG002_chrY	CAT	transcript	62398142	62398880	1000	+	.	source_transcript=ENST00000711271.1;source_transcript_name=WASH6P-216;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711271.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711271.1;transcript_score=252.392;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711271.1,ENST00000711271.1;transcript_id=HG002_chrY_T0002133;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_G0000812;transcript_name=HG002_chrY_T0002133;gene_name=WASH6P;ID=HG002_chrY_T0002133;Name=WASH6P
HG002_chrY	CAT	exon	62398142	62398464	.	+	.	source_transcript=ENST00000711271.1;source_transcript_name=WASH6P-216;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711271.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711271.1;transcript_score=252.392;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711271.1,ENST00000711271.1;transcript_id=HG002_chrY_T0002133;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002133;transcript_name=HG002_chrY_T0002133;gene_name=WASH6P;ID=exon:HG002_chrY_T0002133:0;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62398465	62398822	.	+	.	source_transcript=ENST00000711271.1;source_transcript_name=WASH6P-216;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711271.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711271.1;transcript_score=252.392;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711271.1,ENST00000711271.1;transcript_id=HG002_chrY_T0002133;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002133;transcript_name=HG002_chrY_T0002133;gene_name=WASH6P;ID=intron:HG002_chrY_T0002133:0;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62398823	62398880	.	+	.	source_transcript=ENST00000711271.1;source_transcript_name=WASH6P-216;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711271.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711271.1;transcript_score=252.392;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711271.1,ENST00000711271.1;transcript_id=HG002_chrY_T0002133;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002133;transcript_name=HG002_chrY_T0002133;gene_name=WASH6P;ID=exon:HG002_chrY_T0002133:1;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62398277	62401440	100	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002134;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_G0000812;transcript_name=HG002_chrY_T0002134;gene_name=WASH6P;ID=HG002_chrY_T0002134;Name=WASH6P
HG002_chrY	CAT	exon	62398277	62398464	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002134;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002134;transcript_name=HG002_chrY_T0002134;gene_name=WASH6P;ID=exon:HG002_chrY_T0002134:0;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62398277	62398464	.	+	0	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002134;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002134;transcript_name=HG002_chrY_T0002134;gene_name=WASH6P;ID=CDS:HG002_chrY_T0002134:0;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	start_codon	62398277	62398279	.	+	0	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002134;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002134;transcript_name=HG002_chrY_T0002134;gene_name=WASH6P;ID=start_codon:HG002_chrY_T0002134;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62398465	62398895	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002134;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002134;transcript_name=HG002_chrY_T0002134;gene_name=WASH6P;ID=intron:HG002_chrY_T0002134:0;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62398896	62398900	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002134;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002134;transcript_name=HG002_chrY_T0002134;gene_name=WASH6P;ID=exon:HG002_chrY_T0002134:1;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62398896	62398900	.	+	1	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002134;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002134;transcript_name=HG002_chrY_T0002134;gene_name=WASH6P;ID=CDS:HG002_chrY_T0002134:1;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62398901	62399077	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002134;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002134;transcript_name=HG002_chrY_T0002134;gene_name=WASH6P;ID=intron:HG002_chrY_T0002134:1;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62399078	62399279	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002134;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002134;transcript_name=HG002_chrY_T0002134;gene_name=WASH6P;ID=exon:HG002_chrY_T0002134:2;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62399078	62399279	.	+	0	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002134;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002134;transcript_name=HG002_chrY_T0002134;gene_name=WASH6P;ID=CDS:HG002_chrY_T0002134:2;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62399280	62399367	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002134;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002134;transcript_name=HG002_chrY_T0002134;gene_name=WASH6P;ID=intron:HG002_chrY_T0002134:2;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62399368	62399526	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002134;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002134;transcript_name=HG002_chrY_T0002134;gene_name=WASH6P;ID=exon:HG002_chrY_T0002134:3;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62399368	62399526	.	+	2	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002134;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002134;transcript_name=HG002_chrY_T0002134;gene_name=WASH6P;ID=CDS:HG002_chrY_T0002134:3;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62399527	62400185	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002134;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002134;transcript_name=HG002_chrY_T0002134;gene_name=WASH6P;ID=intron:HG002_chrY_T0002134:3;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62400186	62400338	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002134;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002134;transcript_name=HG002_chrY_T0002134;gene_name=WASH6P;ID=exon:HG002_chrY_T0002134:4;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62400186	62400338	.	+	2	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002134;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002134;transcript_name=HG002_chrY_T0002134;gene_name=WASH6P;ID=CDS:HG002_chrY_T0002134:4;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62400339	62401097	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002134;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002134;transcript_name=HG002_chrY_T0002134;gene_name=WASH6P;ID=intron:HG002_chrY_T0002134:4;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62401098	62401166	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002134;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002134;transcript_name=HG002_chrY_T0002134;gene_name=WASH6P;ID=exon:HG002_chrY_T0002134:5;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62401098	62401166	.	+	2	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002134;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002134;transcript_name=HG002_chrY_T0002134;gene_name=WASH6P;ID=CDS:HG002_chrY_T0002134:5;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62401167	62401306	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002134;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002134;transcript_name=HG002_chrY_T0002134;gene_name=WASH6P;ID=intron:HG002_chrY_T0002134:5;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62401307	62401440	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002134;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002134;transcript_name=HG002_chrY_T0002134;gene_name=WASH6P;ID=exon:HG002_chrY_T0002134:6;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	CDS	62401307	62401440	.	+	2	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002134;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002134;transcript_name=HG002_chrY_T0002134;gene_name=WASH6P;ID=CDS:HG002_chrY_T0002134:6;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	stop_codon	62401438	62401440	.	+	0	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002134;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002134;transcript_name=HG002_chrY_T0002134;gene_name=WASH6P;ID=stop_codon:HG002_chrY_T0002134;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62398644	62401729	1000	+	.	source_transcript=ENST00000711273.1;source_transcript_name=WASH6P-218;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711273.1;transcript_score=240.763;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711273.1,ENST00000711273.1;transcript_id=HG002_chrY_T0002135;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_G0000812;transcript_name=HG002_chrY_T0002135;gene_name=WASH6P;ID=HG002_chrY_T0002135;Name=WASH6P
HG002_chrY	CAT	exon	62398644	62399275	.	+	.	source_transcript=ENST00000711273.1;source_transcript_name=WASH6P-218;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711273.1;transcript_score=240.763;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711273.1,ENST00000711273.1;transcript_id=HG002_chrY_T0002135;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002135;transcript_name=HG002_chrY_T0002135;gene_name=WASH6P;ID=exon:HG002_chrY_T0002135:0;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62399276	62399367	.	+	.	source_transcript=ENST00000711273.1;source_transcript_name=WASH6P-218;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711273.1;transcript_score=240.763;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711273.1,ENST00000711273.1;transcript_id=HG002_chrY_T0002135;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002135;transcript_name=HG002_chrY_T0002135;gene_name=WASH6P;ID=intron:HG002_chrY_T0002135:0;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62399368	62401729	.	+	.	source_transcript=ENST00000711273.1;source_transcript_name=WASH6P-218;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711273.1;transcript_score=240.763;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711273.1,ENST00000711273.1;transcript_id=HG002_chrY_T0002135;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002135;transcript_name=HG002_chrY_T0002135;gene_name=WASH6P;ID=exon:HG002_chrY_T0002135:1;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62398762	62399273	1000	+	.	source_transcript=ENST00000711274.1;source_transcript_name=WASH6P-219;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711274.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711274.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002136;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_G0000812;transcript_name=HG002_chrY_T0002136;gene_name=WASH6P;ID=HG002_chrY_T0002136;Name=WASH6P
HG002_chrY	CAT	exon	62398762	62398895	.	+	.	source_transcript=ENST00000711274.1;source_transcript_name=WASH6P-219;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711274.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711274.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002136;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002136;transcript_name=HG002_chrY_T0002136;gene_name=WASH6P;ID=exon:HG002_chrY_T0002136:0;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62398896	62399077	.	+	.	source_transcript=ENST00000711274.1;source_transcript_name=WASH6P-219;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711274.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711274.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002136;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002136;transcript_name=HG002_chrY_T0002136;gene_name=WASH6P;ID=intron:HG002_chrY_T0002136:0;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62399078	62399273	.	+	.	source_transcript=ENST00000711274.1;source_transcript_name=WASH6P-219;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711274.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711274.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002136;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002136;transcript_name=HG002_chrY_T0002136;gene_name=WASH6P;ID=exon:HG002_chrY_T0002136:1;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62398896	62401732	1000	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG002_chrY_T0002137;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_G0000812;transcript_name=HG002_chrY_T0002137;gene_name=WASH6P;ID=HG002_chrY_T0002137;Name=WASH6P
HG002_chrY	CAT	exon	62398896	62398900	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG002_chrY_T0002137;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002137;transcript_name=HG002_chrY_T0002137;gene_name=WASH6P;ID=exon:HG002_chrY_T0002137:0;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62398901	62399077	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG002_chrY_T0002137;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002137;transcript_name=HG002_chrY_T0002137;gene_name=WASH6P;ID=intron:HG002_chrY_T0002137:0;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62399078	62399275	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG002_chrY_T0002137;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002137;transcript_name=HG002_chrY_T0002137;gene_name=WASH6P;ID=exon:HG002_chrY_T0002137:1;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62399276	62399367	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG002_chrY_T0002137;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002137;transcript_name=HG002_chrY_T0002137;gene_name=WASH6P;ID=intron:HG002_chrY_T0002137:1;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62399368	62399526	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG002_chrY_T0002137;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002137;transcript_name=HG002_chrY_T0002137;gene_name=WASH6P;ID=exon:HG002_chrY_T0002137:2;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62399527	62400185	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG002_chrY_T0002137;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002137;transcript_name=HG002_chrY_T0002137;gene_name=WASH6P;ID=intron:HG002_chrY_T0002137:2;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62400186	62400338	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG002_chrY_T0002137;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002137;transcript_name=HG002_chrY_T0002137;gene_name=WASH6P;ID=exon:HG002_chrY_T0002137:3;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62400339	62401097	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG002_chrY_T0002137;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002137;transcript_name=HG002_chrY_T0002137;gene_name=WASH6P;ID=intron:HG002_chrY_T0002137:3;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62401098	62401166	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG002_chrY_T0002137;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002137;transcript_name=HG002_chrY_T0002137;gene_name=WASH6P;ID=exon:HG002_chrY_T0002137:4;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62401167	62401306	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG002_chrY_T0002137;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002137;transcript_name=HG002_chrY_T0002137;gene_name=WASH6P;ID=intron:HG002_chrY_T0002137:4;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62401307	62401732	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG002_chrY_T0002137;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002137;transcript_name=HG002_chrY_T0002137;gene_name=WASH6P;ID=exon:HG002_chrY_T0002137:5;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62398896	62401732	1000	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=275.772;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=HG002_chrY_T0002138;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_G0000812;transcript_name=HG002_chrY_T0002138;gene_name=WASH6P;ID=HG002_chrY_T0002138;Name=WASH6P
HG002_chrY	CAT	exon	62398896	62398900	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=275.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=HG002_chrY_T0002138;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002138;transcript_name=HG002_chrY_T0002138;gene_name=WASH6P;ID=exon:HG002_chrY_T0002138:0;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62398901	62399077	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=275.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=HG002_chrY_T0002138;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002138;transcript_name=HG002_chrY_T0002138;gene_name=WASH6P;ID=intron:HG002_chrY_T0002138:0;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62399078	62399275	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=275.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=HG002_chrY_T0002138;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002138;transcript_name=HG002_chrY_T0002138;gene_name=WASH6P;ID=exon:HG002_chrY_T0002138:1;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62399276	62399367	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=275.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=HG002_chrY_T0002138;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002138;transcript_name=HG002_chrY_T0002138;gene_name=WASH6P;ID=intron:HG002_chrY_T0002138:1;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62399368	62401166	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=275.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=HG002_chrY_T0002138;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002138;transcript_name=HG002_chrY_T0002138;gene_name=WASH6P;ID=exon:HG002_chrY_T0002138:2;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62401167	62401306	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=275.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=HG002_chrY_T0002138;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002138;transcript_name=HG002_chrY_T0002138;gene_name=WASH6P;ID=intron:HG002_chrY_T0002138:2;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62401307	62401732	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=275.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=HG002_chrY_T0002138;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002138;transcript_name=HG002_chrY_T0002138;gene_name=WASH6P;ID=exon:HG002_chrY_T0002138:3;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62398896	62401776	1000	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG002_chrY_T0002139;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_G0000812;transcript_name=HG002_chrY_T0002139;gene_name=WASH6P;ID=HG002_chrY_T0002139;Name=WASH6P
HG002_chrY	CAT	exon	62398896	62398900	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG002_chrY_T0002139;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002139;transcript_name=HG002_chrY_T0002139;gene_name=WASH6P;ID=exon:HG002_chrY_T0002139:0;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62398901	62399077	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG002_chrY_T0002139;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002139;transcript_name=HG002_chrY_T0002139;gene_name=WASH6P;ID=intron:HG002_chrY_T0002139:0;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62399078	62399279	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG002_chrY_T0002139;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002139;transcript_name=HG002_chrY_T0002139;gene_name=WASH6P;ID=exon:HG002_chrY_T0002139:1;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62399280	62399367	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG002_chrY_T0002139;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002139;transcript_name=HG002_chrY_T0002139;gene_name=WASH6P;ID=intron:HG002_chrY_T0002139:1;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62399368	62399526	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG002_chrY_T0002139;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002139;transcript_name=HG002_chrY_T0002139;gene_name=WASH6P;ID=exon:HG002_chrY_T0002139:2;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62399527	62400185	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG002_chrY_T0002139;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002139;transcript_name=HG002_chrY_T0002139;gene_name=WASH6P;ID=intron:HG002_chrY_T0002139:2;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62400186	62400338	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG002_chrY_T0002139;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002139;transcript_name=HG002_chrY_T0002139;gene_name=WASH6P;ID=exon:HG002_chrY_T0002139:3;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62400339	62401097	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG002_chrY_T0002139;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002139;transcript_name=HG002_chrY_T0002139;gene_name=WASH6P;ID=intron:HG002_chrY_T0002139:3;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62401098	62401166	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG002_chrY_T0002139;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002139;transcript_name=HG002_chrY_T0002139;gene_name=WASH6P;ID=exon:HG002_chrY_T0002139:4;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62401167	62401306	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG002_chrY_T0002139;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002139;transcript_name=HG002_chrY_T0002139;gene_name=WASH6P;ID=intron:HG002_chrY_T0002139:4;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62401307	62401776	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG002_chrY_T0002139;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002139;transcript_name=HG002_chrY_T0002139;gene_name=WASH6P;ID=exon:HG002_chrY_T0002139:5;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62398896	62401729	1000	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=285.645;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=HG002_chrY_T0002140;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_G0000812;transcript_name=HG002_chrY_T0002140;gene_name=WASH6P;ID=HG002_chrY_T0002140;Name=WASH6P
HG002_chrY	CAT	exon	62398896	62398900	.	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=285.645;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=HG002_chrY_T0002140;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002140;transcript_name=HG002_chrY_T0002140;gene_name=WASH6P;ID=exon:HG002_chrY_T0002140:0;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62398901	62399077	.	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=285.645;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=HG002_chrY_T0002140;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002140;transcript_name=HG002_chrY_T0002140;gene_name=WASH6P;ID=intron:HG002_chrY_T0002140:0;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62399078	62399275	.	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=285.645;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=HG002_chrY_T0002140;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002140;transcript_name=HG002_chrY_T0002140;gene_name=WASH6P;ID=exon:HG002_chrY_T0002140:1;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62399276	62399367	.	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=285.645;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=HG002_chrY_T0002140;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002140;transcript_name=HG002_chrY_T0002140;gene_name=WASH6P;ID=intron:HG002_chrY_T0002140:1;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62399368	62401729	.	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=285.645;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=HG002_chrY_T0002140;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002140;transcript_name=HG002_chrY_T0002140;gene_name=WASH6P;ID=exon:HG002_chrY_T0002140:2;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62398896	62399597	1000	+	.	source_transcript=ENST00000711282.1;source_transcript_name=WASH6P-227;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711282.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711282.1;transcript_score=292.499;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711282.1,ENST00000711282.1;transcript_id=HG002_chrY_T0002141;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_G0000812;transcript_name=HG002_chrY_T0002141;gene_name=WASH6P;ID=HG002_chrY_T0002141;Name=WASH6P
HG002_chrY	CAT	exon	62398896	62399279	.	+	.	source_transcript=ENST00000711282.1;source_transcript_name=WASH6P-227;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711282.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711282.1;transcript_score=292.499;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711282.1,ENST00000711282.1;transcript_id=HG002_chrY_T0002141;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002141;transcript_name=HG002_chrY_T0002141;gene_name=WASH6P;ID=exon:HG002_chrY_T0002141:0;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62399280	62399367	.	+	.	source_transcript=ENST00000711282.1;source_transcript_name=WASH6P-227;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711282.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711282.1;transcript_score=292.499;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711282.1,ENST00000711282.1;transcript_id=HG002_chrY_T0002141;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002141;transcript_name=HG002_chrY_T0002141;gene_name=WASH6P;ID=intron:HG002_chrY_T0002141:0;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62399368	62399597	.	+	.	source_transcript=ENST00000711282.1;source_transcript_name=WASH6P-227;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711282.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711282.1;transcript_score=292.499;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711282.1,ENST00000711282.1;transcript_id=HG002_chrY_T0002141;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002141;transcript_name=HG002_chrY_T0002141;gene_name=WASH6P;ID=exon:HG002_chrY_T0002141:1;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62398896	62399401	1000	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002142;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_G0000812;transcript_name=HG002_chrY_T0002142;gene_name=WASH6P;ID=HG002_chrY_T0002142;Name=WASH6P
HG002_chrY	CAT	exon	62398896	62398900	.	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002142;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002142;transcript_name=HG002_chrY_T0002142;gene_name=WASH6P;ID=exon:HG002_chrY_T0002142:0;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62398901	62399077	.	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002142;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002142;transcript_name=HG002_chrY_T0002142;gene_name=WASH6P;ID=intron:HG002_chrY_T0002142:0;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62399078	62399279	.	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002142;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002142;transcript_name=HG002_chrY_T0002142;gene_name=WASH6P;ID=exon:HG002_chrY_T0002142:1;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62399280	62399367	.	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002142;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002142;transcript_name=HG002_chrY_T0002142;gene_name=WASH6P;ID=intron:HG002_chrY_T0002142:1;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62399368	62399401	.	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002142;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002142;transcript_name=HG002_chrY_T0002142;gene_name=WASH6P;ID=exon:HG002_chrY_T0002142:2;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62398896	62399455	1000	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002143;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_G0000812;transcript_name=HG002_chrY_T0002143;gene_name=WASH6P;ID=HG002_chrY_T0002143;Name=WASH6P
HG002_chrY	CAT	exon	62398896	62398900	.	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002143;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002143;transcript_name=HG002_chrY_T0002143;gene_name=WASH6P;ID=exon:HG002_chrY_T0002143:0;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62398901	62399077	.	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002143;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002143;transcript_name=HG002_chrY_T0002143;gene_name=WASH6P;ID=intron:HG002_chrY_T0002143:0;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62399078	62399275	.	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002143;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002143;transcript_name=HG002_chrY_T0002143;gene_name=WASH6P;ID=exon:HG002_chrY_T0002143:1;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62399276	62399367	.	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002143;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002143;transcript_name=HG002_chrY_T0002143;gene_name=WASH6P;ID=intron:HG002_chrY_T0002143:1;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62399368	62399455	.	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002143;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002143;transcript_name=HG002_chrY_T0002143;gene_name=WASH6P;ID=exon:HG002_chrY_T0002143:2;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62399078	62399158	1000	+	.	source_transcript=ENST00000711279.1;source_transcript_name=WASH6P-224;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711279.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002144;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_G0000812;transcript_name=HG002_chrY_T0002144;gene_name=WASH6P;ID=HG002_chrY_T0002144;Name=WASH6P
HG002_chrY	CAT	exon	62399078	62399158	.	+	.	source_transcript=ENST00000711279.1;source_transcript_name=WASH6P-224;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711279.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=HG002_chrY_T0002144;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002144;transcript_name=HG002_chrY_T0002144;gene_name=WASH6P;ID=exon:HG002_chrY_T0002144:0;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62399433	62401732	1000	+	.	source_transcript=ENST00000711283.1;source_transcript_name=WASH6P-228;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711283.1;transcript_score=299.634;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711283.1,ENST00000711283.1;transcript_id=HG002_chrY_T0002145;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_G0000812;transcript_name=HG002_chrY_T0002145;gene_name=WASH6P;ID=HG002_chrY_T0002145;Name=WASH6P
HG002_chrY	CAT	exon	62399433	62399526	.	+	.	source_transcript=ENST00000711283.1;source_transcript_name=WASH6P-228;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711283.1;transcript_score=299.634;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711283.1,ENST00000711283.1;transcript_id=HG002_chrY_T0002145;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002145;transcript_name=HG002_chrY_T0002145;gene_name=WASH6P;ID=exon:HG002_chrY_T0002145:0;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62399527	62400185	.	+	.	source_transcript=ENST00000711283.1;source_transcript_name=WASH6P-228;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711283.1;transcript_score=299.634;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711283.1,ENST00000711283.1;transcript_id=HG002_chrY_T0002145;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002145;transcript_name=HG002_chrY_T0002145;gene_name=WASH6P;ID=intron:HG002_chrY_T0002145:0;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62400186	62401732	.	+	.	source_transcript=ENST00000711283.1;source_transcript_name=WASH6P-228;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711283.1;transcript_score=299.634;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711283.1,ENST00000711283.1;transcript_id=HG002_chrY_T0002145;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002145;transcript_name=HG002_chrY_T0002145;gene_name=WASH6P;ID=exon:HG002_chrY_T0002145:1;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62399890	62401620	1000	+	.	source_transcript=ENST00000711284.1;source_transcript_name=WASH6P-229;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711284.1;transcript_score=299.88;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711284.1,ENST00000711284.1;transcript_id=HG002_chrY_T0002146;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_G0000812;transcript_name=HG002_chrY_T0002146;gene_name=WASH6P;ID=HG002_chrY_T0002146;Name=WASH6P
HG002_chrY	CAT	exon	62399890	62400338	.	+	.	source_transcript=ENST00000711284.1;source_transcript_name=WASH6P-229;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711284.1;transcript_score=299.88;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711284.1,ENST00000711284.1;transcript_id=HG002_chrY_T0002146;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002146;transcript_name=HG002_chrY_T0002146;gene_name=WASH6P;ID=exon:HG002_chrY_T0002146:0;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62400339	62401097	.	+	.	source_transcript=ENST00000711284.1;source_transcript_name=WASH6P-229;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711284.1;transcript_score=299.88;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711284.1,ENST00000711284.1;transcript_id=HG002_chrY_T0002146;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002146;transcript_name=HG002_chrY_T0002146;gene_name=WASH6P;ID=intron:HG002_chrY_T0002146:0;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62401098	62401166	.	+	.	source_transcript=ENST00000711284.1;source_transcript_name=WASH6P-229;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711284.1;transcript_score=299.88;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711284.1,ENST00000711284.1;transcript_id=HG002_chrY_T0002146;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002146;transcript_name=HG002_chrY_T0002146;gene_name=WASH6P;ID=exon:HG002_chrY_T0002146:1;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62401167	62401306	.	+	.	source_transcript=ENST00000711284.1;source_transcript_name=WASH6P-229;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711284.1;transcript_score=299.88;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711284.1,ENST00000711284.1;transcript_id=HG002_chrY_T0002146;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002146;transcript_name=HG002_chrY_T0002146;gene_name=WASH6P;ID=intron:HG002_chrY_T0002146:1;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62401307	62401620	.	+	.	source_transcript=ENST00000711284.1;source_transcript_name=WASH6P-229;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711284.1;transcript_score=299.88;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711284.1,ENST00000711284.1;transcript_id=HG002_chrY_T0002146;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002146;transcript_name=HG002_chrY_T0002146;gene_name=WASH6P;ID=exon:HG002_chrY_T0002146:2;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62400137	62401620	1000	+	.	source_transcript=ENST00000711285.1;source_transcript_name=WASH6P-230;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711285.1;transcript_score=299.813;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711285.1,ENST00000711285.1;transcript_id=HG002_chrY_T0002147;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_G0000812;transcript_name=HG002_chrY_T0002147;gene_name=WASH6P;ID=HG002_chrY_T0002147;Name=WASH6P
HG002_chrY	CAT	exon	62400137	62400338	.	+	.	source_transcript=ENST00000711285.1;source_transcript_name=WASH6P-230;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711285.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711285.1,ENST00000711285.1;transcript_id=HG002_chrY_T0002147;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002147;transcript_name=HG002_chrY_T0002147;gene_name=WASH6P;ID=exon:HG002_chrY_T0002147:0;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62400339	62401097	.	+	.	source_transcript=ENST00000711285.1;source_transcript_name=WASH6P-230;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711285.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711285.1,ENST00000711285.1;transcript_id=HG002_chrY_T0002147;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002147;transcript_name=HG002_chrY_T0002147;gene_name=WASH6P;ID=intron:HG002_chrY_T0002147:0;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62401098	62401115	.	+	.	source_transcript=ENST00000711285.1;source_transcript_name=WASH6P-230;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711285.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711285.1,ENST00000711285.1;transcript_id=HG002_chrY_T0002147;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002147;transcript_name=HG002_chrY_T0002147;gene_name=WASH6P;ID=exon:HG002_chrY_T0002147:1;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62401116	62401306	.	+	.	source_transcript=ENST00000711285.1;source_transcript_name=WASH6P-230;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711285.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711285.1,ENST00000711285.1;transcript_id=HG002_chrY_T0002147;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002147;transcript_name=HG002_chrY_T0002147;gene_name=WASH6P;ID=intron:HG002_chrY_T0002147:1;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62401307	62401620	.	+	.	source_transcript=ENST00000711285.1;source_transcript_name=WASH6P-230;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711285.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711285.1,ENST00000711285.1;transcript_id=HG002_chrY_T0002147;gene_id=HG002_chrY_G0000812;Parent=HG002_chrY_T0002147;transcript_name=HG002_chrY_T0002147;gene_name=WASH6P;ID=exon:HG002_chrY_T0002147:2;Name=WASH6P;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	62401658	62405180	.	-	.	source_gene_common_name=ENSG00000310542;source_gene=ENSG00000310542.1;gene_id=HG002_chrY_G0000813;gene_biotype=lncRNA;gene_name=ENSG00000310542;gene_sources=liftoff;ID=HG002_chrY_G0000813;Name=ENSG00000310542
HG002_chrY	CAT	transcript	62401658	62401732	1000	-	.	source_transcript=ENST00000850693.1;source_transcript_name=ENST00000850693;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850693.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850693.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002148;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_G0000813;transcript_name=HG002_chrY_T0002148;gene_name=ENSG00000310542;ID=HG002_chrY_T0002148;Name=ENSG00000310542
HG002_chrY	CAT	exon	62401658	62401732	.	-	.	source_transcript=ENST00000850693.1;source_transcript_name=ENST00000850693;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850693.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850693.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002148;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002148;transcript_name=HG002_chrY_T0002148;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002148:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62401723	62405111	1000	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002149;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_G0000813;transcript_name=HG002_chrY_T0002149;gene_name=ENSG00000310542;ID=HG002_chrY_T0002149;Name=ENSG00000310542
HG002_chrY	CAT	exon	62401723	62401860	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002149;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002149;transcript_name=HG002_chrY_T0002149;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002149:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62401861	62402447	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002149;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002149;transcript_name=HG002_chrY_T0002149;gene_name=ENSG00000310542;ID=intron:HG002_chrY_T0002149:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62402448	62402671	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002149;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002149;transcript_name=HG002_chrY_T0002149;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002149:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62402672	62403402	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002149;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002149;transcript_name=HG002_chrY_T0002149;gene_name=ENSG00000310542;ID=intron:HG002_chrY_T0002149:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62403403	62403511	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002149;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002149;transcript_name=HG002_chrY_T0002149;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002149:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62403512	62403896	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002149;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002149;transcript_name=HG002_chrY_T0002149;gene_name=ENSG00000310542;ID=intron:HG002_chrY_T0002149:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62403897	62404114	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002149;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002149;transcript_name=HG002_chrY_T0002149;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002149:3;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62404115	62404912	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002149;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002149;transcript_name=HG002_chrY_T0002149;gene_name=ENSG00000310542;ID=intron:HG002_chrY_T0002149:3;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62404913	62405111	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002149;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002149;transcript_name=HG002_chrY_T0002149;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002149:4;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62401726	62404999	1000	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002150;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_G0000813;transcript_name=HG002_chrY_T0002150;gene_name=ENSG00000310542;ID=HG002_chrY_T0002150;Name=ENSG00000310542
HG002_chrY	CAT	exon	62401726	62402641	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002150;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002150;transcript_name=HG002_chrY_T0002150;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002150:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62402642	62403426	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002150;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002150;transcript_name=HG002_chrY_T0002150;gene_name=ENSG00000310542;ID=intron:HG002_chrY_T0002150:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62403427	62403529	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002150;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002150;transcript_name=HG002_chrY_T0002150;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002150:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62403530	62403896	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002150;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002150;transcript_name=HG002_chrY_T0002150;gene_name=ENSG00000310542;ID=intron:HG002_chrY_T0002150:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62403897	62404114	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002150;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002150;transcript_name=HG002_chrY_T0002150;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002150:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62404115	62404912	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002150;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002150;transcript_name=HG002_chrY_T0002150;gene_name=ENSG00000310542;ID=intron:HG002_chrY_T0002150:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62404913	62404999	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002150;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002150;transcript_name=HG002_chrY_T0002150;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002150:3;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62401727	62405107	1000	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002151;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_G0000813;transcript_name=HG002_chrY_T0002151;gene_name=ENSG00000310542;ID=HG002_chrY_T0002151;Name=ENSG00000310542
HG002_chrY	CAT	exon	62401727	62402899	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002151;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002151;transcript_name=HG002_chrY_T0002151;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002151:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62402900	62403426	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002151;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002151;transcript_name=HG002_chrY_T0002151;gene_name=ENSG00000310542;ID=intron:HG002_chrY_T0002151:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62403427	62403511	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002151;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002151;transcript_name=HG002_chrY_T0002151;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002151:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62403512	62403896	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002151;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002151;transcript_name=HG002_chrY_T0002151;gene_name=ENSG00000310542;ID=intron:HG002_chrY_T0002151:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62403897	62404114	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002151;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002151;transcript_name=HG002_chrY_T0002151;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002151:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62404115	62404912	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002151;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002151;transcript_name=HG002_chrY_T0002151;gene_name=ENSG00000310542;ID=intron:HG002_chrY_T0002151:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62404913	62405107	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002151;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002151;transcript_name=HG002_chrY_T0002151;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002151:3;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62401727	62405140	1000	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002152;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_G0000813;transcript_name=HG002_chrY_T0002152;gene_name=ENSG00000310542;ID=HG002_chrY_T0002152;Name=ENSG00000310542
HG002_chrY	CAT	exon	62401727	62401860	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002152;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002152;transcript_name=HG002_chrY_T0002152;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002152:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62401861	62402447	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002152;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002152;transcript_name=HG002_chrY_T0002152;gene_name=ENSG00000310542;ID=intron:HG002_chrY_T0002152:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62402448	62402671	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002152;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002152;transcript_name=HG002_chrY_T0002152;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002152:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62402672	62403426	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002152;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002152;transcript_name=HG002_chrY_T0002152;gene_name=ENSG00000310542;ID=intron:HG002_chrY_T0002152:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62403427	62403511	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002152;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002152;transcript_name=HG002_chrY_T0002152;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002152:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62403512	62403896	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002152;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002152;transcript_name=HG002_chrY_T0002152;gene_name=ENSG00000310542;ID=intron:HG002_chrY_T0002152:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62403897	62404114	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002152;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002152;transcript_name=HG002_chrY_T0002152;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002152:3;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62404115	62405103	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002152;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002152;transcript_name=HG002_chrY_T0002152;gene_name=ENSG00000310542;ID=intron:HG002_chrY_T0002152:3;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62405104	62405140	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002152;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002152;transcript_name=HG002_chrY_T0002152;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002152:4;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62401729	62405180	1000	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002153;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_G0000813;transcript_name=HG002_chrY_T0002153;gene_name=ENSG00000310542;ID=HG002_chrY_T0002153;Name=ENSG00000310542
HG002_chrY	CAT	exon	62401729	62402671	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002153;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002153;transcript_name=HG002_chrY_T0002153;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002153:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62402672	62403426	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002153;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002153;transcript_name=HG002_chrY_T0002153;gene_name=ENSG00000310542;ID=intron:HG002_chrY_T0002153:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62403427	62403511	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002153;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002153;transcript_name=HG002_chrY_T0002153;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002153:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62403512	62403896	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002153;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002153;transcript_name=HG002_chrY_T0002153;gene_name=ENSG00000310542;ID=intron:HG002_chrY_T0002153:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62403897	62404114	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002153;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002153;transcript_name=HG002_chrY_T0002153;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002153:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62404115	62405103	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002153;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002153;transcript_name=HG002_chrY_T0002153;gene_name=ENSG00000310542;ID=intron:HG002_chrY_T0002153:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62405104	62405180	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002153;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002153;transcript_name=HG002_chrY_T0002153;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002153:3;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62401730	62405020	1000	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002154;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_G0000813;transcript_name=HG002_chrY_T0002154;gene_name=ENSG00000310542;ID=HG002_chrY_T0002154;Name=ENSG00000310542
HG002_chrY	CAT	exon	62401730	62402559	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002154;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002154;transcript_name=HG002_chrY_T0002154;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002154:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62402560	62403426	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002154;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002154;transcript_name=HG002_chrY_T0002154;gene_name=ENSG00000310542;ID=intron:HG002_chrY_T0002154:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62403427	62403511	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002154;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002154;transcript_name=HG002_chrY_T0002154;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002154:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62403512	62403896	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002154;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002154;transcript_name=HG002_chrY_T0002154;gene_name=ENSG00000310542;ID=intron:HG002_chrY_T0002154:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62403897	62404114	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002154;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002154;transcript_name=HG002_chrY_T0002154;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002154:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62404115	62404912	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002154;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002154;transcript_name=HG002_chrY_T0002154;gene_name=ENSG00000310542;ID=intron:HG002_chrY_T0002154:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62404913	62405020	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002154;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002154;transcript_name=HG002_chrY_T0002154;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002154:3;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62402469	62405134	1000	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002156;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_G0000813;transcript_name=HG002_chrY_T0002156;gene_name=ENSG00000310542;ID=HG002_chrY_T0002156;Name=ENSG00000310542
HG002_chrY	CAT	exon	62402469	62402671	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002156;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002156;transcript_name=HG002_chrY_T0002156;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002156:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62402672	62403426	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002156;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002156;transcript_name=HG002_chrY_T0002156;gene_name=ENSG00000310542;ID=intron:HG002_chrY_T0002156:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62403427	62403511	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002156;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002156;transcript_name=HG002_chrY_T0002156;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002156:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62403512	62403896	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002156;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002156;transcript_name=HG002_chrY_T0002156;gene_name=ENSG00000310542;ID=intron:HG002_chrY_T0002156:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62403897	62404114	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002156;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002156;transcript_name=HG002_chrY_T0002156;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002156:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62404115	62404912	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002156;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002156;transcript_name=HG002_chrY_T0002156;gene_name=ENSG00000310542;ID=intron:HG002_chrY_T0002156:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62404913	62405134	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002156;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002156;transcript_name=HG002_chrY_T0002156;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002156:3;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	transcript	62403453	62404277	1000	-	.	source_transcript=ENST00000850701.1;source_transcript_name=ENST00000850701;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850701.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850701.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002157;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_G0000813;transcript_name=HG002_chrY_T0002157;gene_name=ENSG00000310542;ID=HG002_chrY_T0002157;Name=ENSG00000310542
HG002_chrY	CAT	exon	62403453	62403511	.	-	.	source_transcript=ENST00000850701.1;source_transcript_name=ENST00000850701;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850701.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850701.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002157;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002157;transcript_name=HG002_chrY_T0002157;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002157:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62403512	62403896	.	-	.	source_transcript=ENST00000850701.1;source_transcript_name=ENST00000850701;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850701.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850701.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002157;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002157;transcript_name=HG002_chrY_T0002157;gene_name=ENSG00000310542;ID=intron:HG002_chrY_T0002157:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62403897	62404277	.	-	.	source_transcript=ENST00000850701.1;source_transcript_name=ENST00000850701;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850701.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850701.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG002_chrY_T0002157;gene_id=HG002_chrY_G0000813;Parent=HG002_chrY_T0002157;transcript_name=HG002_chrY_T0002157;gene_name=ENSG00000310542;ID=exon:HG002_chrY_T0002157:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG002_chrY	CAT	gene	62401730	62403944	.	-	.	source_gene_common_name=DDX11L16;source_gene=ENSG00000292371.1;gene_id=HG002_chrY_G0000814;gene_biotype=unprocessed_pseudogene;gene_name=DDX11L16;gene_sources=liftoff;ID=HG002_chrY_G0000814;Name=DDX11L16
HG002_chrY	CAT	transcript	62401730	62403944	1000	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=HG002_chrY_T0002155;gene_id=HG002_chrY_G0000814;Parent=HG002_chrY_G0000814;transcript_name=HG002_chrY_T0002155;gene_name=DDX11L16;ID=HG002_chrY_T0002155;Name=DDX11L16
HG002_chrY	CAT	exon	62401730	62402671	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=HG002_chrY_T0002155;gene_id=HG002_chrY_G0000814;Parent=HG002_chrY_T0002155;transcript_name=HG002_chrY_T0002155;gene_name=DDX11L16;ID=exon:HG002_chrY_T0002155:0;Name=DDX11L16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62402672	62402749	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=HG002_chrY_T0002155;gene_id=HG002_chrY_G0000814;Parent=HG002_chrY_T0002155;transcript_name=HG002_chrY_T0002155;gene_name=DDX11L16;ID=intron:HG002_chrY_T0002155:0;Name=DDX11L16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62402750	62402903	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=HG002_chrY_T0002155;gene_id=HG002_chrY_G0000814;Parent=HG002_chrY_T0002155;transcript_name=HG002_chrY_T0002155;gene_name=DDX11L16;ID=exon:HG002_chrY_T0002155:1;Name=DDX11L16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62402904	62403071	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=HG002_chrY_T0002155;gene_id=HG002_chrY_G0000814;Parent=HG002_chrY_T0002155;transcript_name=HG002_chrY_T0002155;gene_name=DDX11L16;ID=intron:HG002_chrY_T0002155:1;Name=DDX11L16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62403072	62403149	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=HG002_chrY_T0002155;gene_id=HG002_chrY_G0000814;Parent=HG002_chrY_T0002155;transcript_name=HG002_chrY_T0002155;gene_name=DDX11L16;ID=exon:HG002_chrY_T0002155:2;Name=DDX11L16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62403150	62403426	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=HG002_chrY_T0002155;gene_id=HG002_chrY_G0000814;Parent=HG002_chrY_T0002155;transcript_name=HG002_chrY_T0002155;gene_name=DDX11L16;ID=intron:HG002_chrY_T0002155:2;Name=DDX11L16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62403427	62403511	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=HG002_chrY_T0002155;gene_id=HG002_chrY_G0000814;Parent=HG002_chrY_T0002155;transcript_name=HG002_chrY_T0002155;gene_name=DDX11L16;ID=exon:HG002_chrY_T0002155:3;Name=DDX11L16;rna_support=False;reference_support=False
HG002_chrY	CAT	intron	62403512	62403896	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=HG002_chrY_T0002155;gene_id=HG002_chrY_G0000814;Parent=HG002_chrY_T0002155;transcript_name=HG002_chrY_T0002155;gene_name=DDX11L16;ID=intron:HG002_chrY_T0002155:3;Name=DDX11L16;rna_support=False;reference_support=False
HG002_chrY	CAT	exon	62403897	62403944	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=HG002_chrY_T0002155;gene_id=HG002_chrY_G0000814;Parent=HG002_chrY_T0002155;transcript_name=HG002_chrY_T0002155;gene_name=DDX11L16;ID=exon:HG002_chrY_T0002155:4;Name=DDX11L16;rna_support=False;reference_support=False